CmoCh14G002760 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh14G002760
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	ethylene-responsive transcription factor ERF024-like
Location	Cmo_Chr14: 1249457 .. 1250002 (+)
RNA-Seq Expression	CmoCh14G002760
Synteny	CmoCh14G002760

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTCCTCCGCCCGCCACCCCATCTACAAAGGCATTCGCCAGCGCACCACCGGCAAATGGGTCTCCGAAATTCGCGAGCCAAGGAAACCCAACCGAATTTGGTTAGGAACCTTCCCAACTGCTGAAATGGCCGCCGTCGCATACGACGTCGCAGCCCTCGCCCTCAAAGGCCAGGACGCCGAGCTCAATTTCCCCAATTCCGCTGCTTCTCTCCCTGTCCCTGCCTCTCGCTCTGCTTCTGATATTCAAGCTGCCGCCGCATCCGCCGCCGCTGCACTTGGCGCAGCCGCCGCCGCTATGGAGGCACGCAATAATAACGGTCGCGCCCGTAGTAACTTCTCTGGAACTAACTCTTCGTACGGAACAAGATACAATGAAAATGAATTGGGAAATCAGTTCGTTGATGAAGATTTAATCTTCGATATGCCTAATGTTCTAATGAACATGGCCGAAGGAATGCTTCTTAGCCCTCCCCGTTTCAATGTCCACGGCAATGACGACCGCGACGACGGCGGTGATCAAAACCTTTGGAACTTTCCCTAA

mRNA sequence

ATGTCTTCCTCCGCCCGCCACCCCATCTACAAAGGCATTCGCCAGCGCACCACCGGCAAATGGGTCTCCGAAATTCGCGAGCCAAGGAAACCCAACCGAATTTGGTTAGGAACCTTCCCAACTGCTGAAATGGCCGCCGTCGCATACGACGTCGCAGCCCTCGCCCTCAAAGGCCAGGACGCCGAGCTCAATTTCCCCAATTCCGCTGCTTCTCTCCCTGTCCCTGCCTCTCGCTCTGCTTCTGATATTCAAGCTGCCGCCGCATCCGCCGCCGCTGCACTTGGCGCAGCCGCCGCCGCTATGGAGGCACGCAATAATAACGGTCGCGCCCGTAGTAACTTCTCTGGAACTAACTCTTCGTACGGAACAAGATACAATGAAAATGAATTGGGAAATCAGTTCGTTGATGAAGATTTAATCTTCGATATGCCTAATGTTCTAATGAACATGGCCGAAGGAATGCTTCTTAGCCCTCCCCGTTTCAATGTCCACGGCAATGACGACCGCGACGACGGCGGTGATCAAAACCTTTGGAACTTTCCCTAA

Coding sequence (CDS)

ATGTCTTCCTCCGCCCGCCACCCCATCTACAAAGGCATTCGCCAGCGCACCACCGGCAAATGGGTCTCCGAAATTCGCGAGCCAAGGAAACCCAACCGAATTTGGTTAGGAACCTTCCCAACTGCTGAAATGGCCGCCGTCGCATACGACGTCGCAGCCCTCGCCCTCAAAGGCCAGGACGCCGAGCTCAATTTCCCCAATTCCGCTGCTTCTCTCCCTGTCCCTGCCTCTCGCTCTGCTTCTGATATTCAAGCTGCCGCCGCATCCGCCGCCGCTGCACTTGGCGCAGCCGCCGCCGCTATGGAGGCACGCAATAATAACGGTCGCGCCCGTAGTAACTTCTCTGGAACTAACTCTTCGTACGGAACAAGATACAATGAAAATGAATTGGGAAATCAGTTCGTTGATGAAGATTTAATCTTCGATATGCCTAATGTTCTAATGAACATGGCCGAAGGAATGCTTCTTAGCCCTCCCCGTTTCAATGTCCACGGCAATGACGACCGCGACGACGGCGGTGATCAAAACCTTTGGAACTTTCCCTAA

Protein sequence

MSSSARHPIYKGIRQRTTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQDAELNFPNSAASLPVPASRSASDIQAAAASAAAALGAAAAAMEARNNNGRARSNFSGTNSSYGTRYNENELGNQFVDEDLIFDMPNVLMNMAEGMLLSPPRFNVHGNDDRDDGGDQNLWNFP

Homology

[Close]

BLAST of CmoCh14G002760 vs. ExPASy Swiss-Prot
Match: Q9SJR0 (Ethylene-responsive transcription factor ERF024 OS=Arabidopsis thaliana OX=3702 GN=ERF024 PE=2 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 2.2e-51
Identity = 119/183 (65.03%), Postives = 135/183 (73.77%), Query Frame = 0


Query: 3   SSARHPIYKGIRQR-TTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQDA 62
           +  RHP+Y+G+RQR  + KWVSEIREPRKPNRIWLGTF T EMAA+AYDVAALALKG  A
Sbjct: 8   NGGRHPLYRGVRQRKNSNKWVSEIREPRKPNRIWLGTFSTPEMAAIAYDVAALALKGSQA 67

Query: 63  ELNFPNSAASLPVPASRSASDIQAAAASAAAALGAAAAAMEARNNNGRARSNFSGTNSSY 122
           ELNFPNS +SLP P S S +DIQAAAASAAAA GAA  A+   NNN +  S  +  NSSY
Sbjct: 68  ELNFPNSVSSLPAPTSMSPADIQAAAASAAAAFGAARDAIVMANNNSQT-SGVACMNSSY 127

Query: 123 GTRYNENELGNQFVDEDLIFDMPNVLMNMAEGMLLSPPR---FNVHGNDDRDDGGDQNLW 182
                +N   N F+DEDL+FDMPNVLMNMAEGMLLSPPR   F+   + D   GGD  LW
Sbjct: 128 -----DNTNMNGFMDEDLVFDMPNVLMNMAEGMLLSPPRPTVFDAAYDADGFPGGDDYLW 184

[Close]

BLAST of CmoCh14G002760 vs. ExPASy Swiss-Prot
Match: Q38Q39 (Ethylene-responsive transcription factor ERF027 OS=Arabidopsis thaliana OX=3702 GN=ERF027 PE=2 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 2.2e-35
Identity = 88/187 (47.06%), Postives = 128/187 (68.45%), Query Frame = 0


Query: 1   MSSSARHPIYKGIRQRTTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQD 60
           + S  + P+Y+GIR R +GKWVSEIREPRK  RIWLGT+P AEMAA AYDVAA+ALKG++
Sbjct: 10  LGSRRKDPVYRGIRCR-SGKWVSEIREPRKTTRIWLGTYPMAEMAAAAYDVAAMALKGRE 69

Query: 61  AELNFPNSAASLPVPASRSASDIQAAAASAAAALGAAAA-----AMEARNNNGRARSNFS 120
           A LNFP S  S PVP S SA+DI+AAAA+AAA  G         A E ++++ ++R+   
Sbjct: 70  AVLNFPGSVGSYPVPESTSAADIRAAAAAAAAMKGCEEGEEEKKAKEKKSSSSKSRAREC 129

Query: 121 GTNSSYGTRYNENELGNQFVDEDLIFDMPNVLMNMAEGMLLSPPRF--NVHGNDDRDDGG 180
             ++  G   + +  G +F+DE+ + +MPN+L NMAEGM+++PP +  +   +D  ++  
Sbjct: 130 HVDNDVG---SSSWCGTEFMDEEEVLNMPNLLANMAEGMMVAPPSWMGSRPSDDSPENSN 189

[Close]

BLAST of CmoCh14G002760 vs. ExPASy Swiss-Prot
Match: Q9CAN9 (Ethylene-responsive transcription factor ERF026 OS=Arabidopsis thaliana OX=3702 GN=ERF026 PE=2 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 6.7e-32
Identity = 85/181 (46.96%), Postives = 119/181 (65.75%), Query Frame = 0


Query: 1   MSSSARHPIYKGIRQRTTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQD 60
           +S   ++P+Y+GIR R +GKWVSEIREP+K  R+WLGT+PT EMAA AYDVAALALKG D
Sbjct: 81  ISRRKKNPVYRGIRCR-SGKWVSEIREPKKTTRVWLGTYPTPEMAAAAYDVAALALKGGD 140

Query: 61  AELNFPNSAASLPVPASRSASDIQAAAASAAAALGAAAAAMEARNNNGRARSNFSGTNSS 120
             LNFP+S  S P+P S SA+ I+ AAA+AAA  GAA AA++               +  
Sbjct: 141 TLLNFPDSLGSYPIPLSSSAAHIRCAAAAAAATRGAAGAAVKVGQKK---------EDKV 200

Query: 121 YGTRYNENELGNQFVDEDLIFDMPNVLMNMAEGMLLSPPRFNVHGNDDRDDGGD-QNLWN 180
           Y T    + +G  FVDE+ + +MP +L +MA+GM+++PP      +DD  +  D ++LW+
Sbjct: 201 YDTA-ESSTMG--FVDEEELLNMPGLLADMAKGMMVAPPWMGSPPSDDSPENSDGESLWS 248

[Close]

BLAST of CmoCh14G002760 vs. ExPASy Swiss-Prot
Match: P93835 (Dehydration-responsive element-binding protein 1B OS=Arabidopsis thaliana OX=3702 GN=DREB1B PE=1 SV=2)

HSP 1 Score: 138.3 bits (347), Expect = 8.8e-32
Identity = 86/175 (49.14%), Postives = 108/175 (61.71%), Query Frame = 0


Query: 6   RHPIYKGIRQRTTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQDAELNF 65
           RHPIY+G+RQR +GKWVSE+REP K  RIWLGTF TAEMAA A+DVAALAL+G+ A LNF
Sbjct: 44  RHPIYRGVRQRNSGKWVSEVREPNKKTRIWLGTFQTAEMAARAHDVAALALRGRSACLNF 103

Query: 66  PNSAASLPVPASRSASDIQAAAASAAAALGAAAAAMEARNNNGRARSNFSGTNSSYGTRY 125
            +SA  L +P S  A DIQ AAA AA A           N+            + Y    
Sbjct: 104 ADSAWRLRIPESTCAKDIQKAAAEAALAFQDETCDTTTTNHGLDMEETM--VEAIYTPEQ 163

Query: 126 NENELGNQFVDEDLIFDMPNVLMNMAEGMLLSPPRFNVHGNDDRDDGGDQNLWNF 181
           +E   G  ++DE+ +F MP +L NMAEGMLL PP    + N D +  GD +LW++
Sbjct: 164 SE---GAFYMDEETMFGMPTLLDNMAEGMLLPPPSVQWNHNYDGEGDGDVSLWSY 213

[Close]

BLAST of CmoCh14G002760 vs. ExPASy Swiss-Prot
Match: Q9FJ93 (Dehydration-responsive element-binding protein 1D OS=Arabidopsis thaliana OX=3702 GN=DREB1D PE=2 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 6.3e-30
Identity = 83/176 (47.16%), Postives = 107/176 (60.80%), Query Frame = 0


Query: 6   RHPIYKGIRQRTTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQDAELNF 65
           RHPIY+G+RQR +GKWV E+REP K +RIWLGTFPT EMAA A+DVAALAL+G+ A LNF
Sbjct: 50  RHPIYRGVRQRNSGKWVCEVREPNKKSRIWLGTFPTVEMAARAHDVAALALRGRSACLNF 109

Query: 66  PNSAASLPVPASRSASDIQAAAASAAAALGAAAAAMEARNNNGRARSNFSGTNSSYGTRY 125
            +SA  L +P +    +IQ AA+ AA A         ++          +G     G R 
Sbjct: 110 ADSAWRLRIPETTCPKEIQKAASEAAMAFQNETTTEGSK--TAAEAEEAAGEGVREGERR 169

Query: 126 NENELGNQF-VDEDLIFDMPNVLMNMAEGMLLSPPRFNVHGNDDRDDGGDQNLWNF 181
            E + G  F +D++ +  MPN   NMAEGMLL PP    + N D D  GD +LW+F
Sbjct: 170 AEEQNGGVFYMDDEALLGMPNFFENMAEGMLLPPPEVGWNHN-DFDGVGDVSLWSF 222

[Close]

BLAST of CmoCh14G002760 vs. ExPASy TrEMBL
Match: A0A6J1F5U1 (ethylene-responsive transcription factor ERF024-like OS=Cucurbita moschata OX=3662 GN=LOC111442412 PE=4 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 1.6e-92
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 1   MSSSARHPIYKGIRQRTTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQD 60
           MSSSARHPIYKGIRQRTTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQD
Sbjct: 1   MSSSARHPIYKGIRQRTTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQD 60

Query: 61  AELNFPNSAASLPVPASRSASDIQAAAASAAAALGAAAAAMEARNNNGRARSNFSGTNSS 120
           AELNFPNSAASLPVPASRSASDIQAAAASAAAALGAAAAAMEARNNNGRARSNFSGTNSS
Sbjct: 61  AELNFPNSAASLPVPASRSASDIQAAAASAAAALGAAAAAMEARNNNGRARSNFSGTNSS 120

Query: 121 YGTRYNENELGNQFVDEDLIFDMPNVLMNMAEGMLLSPPRFNVHGNDDRDDGGDQNLWNF 180
           YGTRYNENELGNQFVDEDLIFDMPNVLMNMAEGMLLSPPRFNVHGNDDRDDGGDQNLWNF
Sbjct: 121 YGTRYNENELGNQFVDEDLIFDMPNVLMNMAEGMLLSPPRFNVHGNDDRDDGGDQNLWNF 180

Query: 181 P 182
           P
Sbjct: 181 P 181

[Close]

BLAST of CmoCh14G002760 vs. ExPASy TrEMBL
Match: A0A6J1J6V1 (ethylene-responsive transcription factor ERF024-like OS=Cucurbita maxima OX=3661 GN=LOC111481761 PE=4 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 5.8e-87
Identity = 173/181 (95.58%), Postives = 178/181 (98.34%), Query Frame = 0


Query: 1   MSSSARHPIYKGIRQRTTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQD 60
           MSSS RHPIYKGIRQRTTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQD
Sbjct: 1   MSSSGRHPIYKGIRQRTTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQD 60

Query: 61  AELNFPNSAASLPVPASRSASDIQAAAASAAAALGAAAAAMEARNNNGRARSNFSGTNSS 120
           AELNFPNSAASLPVPASRSASDIQAAAASAAAALGAAAAA+EARNNNGR RSNFSGTNSS
Sbjct: 61  AELNFPNSAASLPVPASRSASDIQAAAASAAAALGAAAAAIEARNNNGRRRSNFSGTNSS 120

Query: 121 YGTRYNENELGNQFVDEDLIFDMPNVLMNMAEGMLLSPPRFNVHGNDDRDDGGDQNLWNF 180
           YGTRY+ENELGN+FVDEDLIFDMPNVL+NMAEGMLLSPPRFNVHGNDDRDD G+QNLWNF
Sbjct: 121 YGTRYDENELGNEFVDEDLIFDMPNVLINMAEGMLLSPPRFNVHGNDDRDD-GNQNLWNF 180

Query: 181 P 182
           P
Sbjct: 181 P 180

[Close]

BLAST of CmoCh14G002760 vs. ExPASy TrEMBL
Match: A0A0A0LBA2 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G751430 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 1.7e-70
Identity = 151/182 (82.97%), Postives = 160/182 (87.91%), Query Frame = 0


Query: 2   SSSARHPIYKGIRQRTTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQDA 61
           SSS RHP+Y+G+R+R TGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQDA
Sbjct: 3   SSSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQDA 62

Query: 62  ELNFPNSAASLPVPASRSASDIQAAAASAAAALGAAAAAMEARNNNGRARSNFSGTNSSY 121
           ELNFPNSA+SLP+PASRS SDIQAAAASAAAALGAAAAAMEARNN    R + S  +  Y
Sbjct: 63  ELNFPNSASSLPIPASRSPSDIQAAAASAAAALGAAAAAMEARNNISSRRGSHS-EDVMY 122

Query: 122 GTRY-NENELGNQFVDEDLIFDMPNVLMNMAEGMLLSPPRFNVHGNDD-RDDGGDQNLWN 181
           G RY  E ELGNQF+DEDLIFDMPNVLMNMAEGMLLSPPRFN HG DD RD G DQNLWN
Sbjct: 123 GARYGQEYELGNQFMDEDLIFDMPNVLMNMAEGMLLSPPRFNNHGGDDNRDFGTDQNLWN 182

[Close]

BLAST of CmoCh14G002760 vs. ExPASy TrEMBL
Match: A0A6J1CUD0 (ethylene-responsive transcription factor ERF024 OS=Momordica charantia OX=3673 GN=LOC111014369 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 3.8e-70
Identity = 147/187 (78.61%), Postives = 163/187 (87.17%), Query Frame = 0


Query: 1   MSSSARHPIYKGIRQRTTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQD 60
           M+SS RHP+Y+G+R+R T KWVSEIREPRKPNRIWLGTFPT EMAAVAYDVAALALKGQD
Sbjct: 1   MASSGRHPVYRGVRRRNTSKWVSEIREPRKPNRIWLGTFPTPEMAAVAYDVAALALKGQD 60

Query: 61  AELNFPNSAASLPVPASRSASDIQAAAASAAAALGAAAAAMEARNNNGRARSNFSGTNSS 120
           AELNFPNSA+SLPVPASRS SDIQAAAASAAAALGAAAAAMEA N++ R   N+S + + 
Sbjct: 61  AELNFPNSASSLPVPASRSPSDIQAAAASAAAALGAAAAAMEAGNSHPR---NYSSSGTH 120

Query: 121 Y----GTRYNENELGNQFVDEDLIFDMPNVLMNMAEGMLLSPPRFNVHG--NDDRDDGGD 180
           Y    G RY++ E G++F+DEDLIFDMPNVLMNMAEGMLLSPPRFNVHG  NDD DD GD
Sbjct: 121 YGDVRGARYDQGESGSEFIDEDLIFDMPNVLMNMAEGMLLSPPRFNVHGGDNDDGDDDGD 180

Query: 181 QNLWNFP 182
           QNLWNFP
Sbjct: 181 QNLWNFP 184

[Close]

BLAST of CmoCh14G002760 vs. ExPASy TrEMBL
Match: A0A5A7TQS0 (Ethylene-responsive transcription factor ERF024-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G003560 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 1.2e-68
Identity = 148/182 (81.32%), Postives = 159/182 (87.36%), Query Frame = 0


Query: 2   SSSARHPIYKGIRQRTTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQDA 61
           SSS RHP+Y+G+R+R TGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQD 
Sbjct: 3   SSSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQDT 62

Query: 62  ELNFPNSAASLPVPASRSASDIQAAAASAAAALGAAAAAMEARNNNGRARSNFSGTNSSY 121
           ELNFPNSA+SLP+PASRS SDIQAAAASAAAALGAAAAAMEARNN+G  R + S  +  Y
Sbjct: 63  ELNFPNSASSLPIPASRSPSDIQAAAASAAAALGAAAAAMEARNNSGSRRGSHS-DDVVY 122

Query: 122 GTRY-NENELGNQFVDEDLIFDMPNVLMNMAEGMLLSPPRFNVHGND-DRDDGGDQNLWN 181
             RY  E EL +QF+DEDLIFDMPNVLMNMAEGMLLSPPRFN HG D DRD G DQNLWN
Sbjct: 123 EARYGQEYELESQFMDEDLIFDMPNVLMNMAEGMLLSPPRFNNHGGDEDRDFGTDQNLWN 182

[Close]

BLAST of CmoCh14G002760 vs. TAIR 10
Match: AT2G36450.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 203.4 bits (516), Expect = 1.6e-52
Identity = 119/183 (65.03%), Postives = 135/183 (73.77%), Query Frame = 0


Query: 3   SSARHPIYKGIRQR-TTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQDA 62
           +  RHP+Y+G+RQR  + KWVSEIREPRKPNRIWLGTF T EMAA+AYDVAALALKG  A
Sbjct: 8   NGGRHPLYRGVRQRKNSNKWVSEIREPRKPNRIWLGTFSTPEMAAIAYDVAALALKGSQA 67

Query: 63  ELNFPNSAASLPVPASRSASDIQAAAASAAAALGAAAAAMEARNNNGRARSNFSGTNSSY 122
           ELNFPNS +SLP P S S +DIQAAAASAAAA GAA  A+   NNN +  S  +  NSSY
Sbjct: 68  ELNFPNSVSSLPAPTSMSPADIQAAAASAAAAFGAARDAIVMANNNSQT-SGVACMNSSY 127

Query: 123 GTRYNENELGNQFVDEDLIFDMPNVLMNMAEGMLLSPPR---FNVHGNDDRDDGGDQNLW 182
                +N   N F+DEDL+FDMPNVLMNMAEGMLLSPPR   F+   + D   GGD  LW
Sbjct: 128 -----DNTNMNGFMDEDLVFDMPNVLMNMAEGMLLSPPRPTVFDAAYDADGFPGGDDYLW 184

[Close]

BLAST of CmoCh14G002760 vs. TAIR 10
Match: AT1G12630.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 150.2 bits (378), Expect = 1.6e-36
Identity = 88/187 (47.06%), Postives = 128/187 (68.45%), Query Frame = 0


Query: 1   MSSSARHPIYKGIRQRTTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQD 60
           + S  + P+Y+GIR R +GKWVSEIREPRK  RIWLGT+P AEMAA AYDVAA+ALKG++
Sbjct: 10  LGSRRKDPVYRGIRCR-SGKWVSEIREPRKTTRIWLGTYPMAEMAAAAYDVAAMALKGRE 69

Query: 61  AELNFPNSAASLPVPASRSASDIQAAAASAAAALGAAAA-----AMEARNNNGRARSNFS 120
           A LNFP S  S PVP S SA+DI+AAAA+AAA  G         A E ++++ ++R+   
Sbjct: 70  AVLNFPGSVGSYPVPESTSAADIRAAAAAAAAMKGCEEGEEEKKAKEKKSSSSKSRAREC 129

Query: 121 GTNSSYGTRYNENELGNQFVDEDLIFDMPNVLMNMAEGMLLSPPRF--NVHGNDDRDDGG 180
             ++  G   + +  G +F+DE+ + +MPN+L NMAEGM+++PP +  +   +D  ++  
Sbjct: 130 HVDNDVG---SSSWCGTEFMDEEEVLNMPNLLANMAEGMMVAPPSWMGSRPSDDSPENSN 189

[Close]

BLAST of CmoCh14G002760 vs. TAIR 10
Match: AT4G25490.1 (C-repeat/DRE binding factor 1 )

HSP 1 Score: 138.3 bits (347), Expect = 6.2e-33
Identity = 86/175 (49.14%), Postives = 108/175 (61.71%), Query Frame = 0


Query: 6   RHPIYKGIRQRTTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQDAELNF 65
           RHPIY+G+RQR +GKWVSE+REP K  RIWLGTF TAEMAA A+DVAALAL+G+ A LNF
Sbjct: 44  RHPIYRGVRQRNSGKWVSEVREPNKKTRIWLGTFQTAEMAARAHDVAALALRGRSACLNF 103

Query: 66  PNSAASLPVPASRSASDIQAAAASAAAALGAAAAAMEARNNNGRARSNFSGTNSSYGTRY 125
            +SA  L +P S  A DIQ AAA AA A           N+            + Y    
Sbjct: 104 ADSAWRLRIPESTCAKDIQKAAAEAALAFQDETCDTTTTNHGLDMEETM--VEAIYTPEQ 163

Query: 126 NENELGNQFVDEDLIFDMPNVLMNMAEGMLLSPPRFNVHGNDDRDDGGDQNLWNF 181
           +E   G  ++DE+ +F MP +L NMAEGMLL PP    + N D +  GD +LW++
Sbjct: 164 SE---GAFYMDEETMFGMPTLLDNMAEGMLLPPPSVQWNHNYDGEGDGDVSLWSY 213

[Close]

BLAST of CmoCh14G002760 vs. TAIR 10
Match: AT5G51990.1 (C-repeat-binding factor 4 )

HSP 1 Score: 132.1 bits (331), Expect = 4.5e-31
Identity = 83/176 (47.16%), Postives = 107/176 (60.80%), Query Frame = 0


Query: 6   RHPIYKGIRQRTTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQDAELNF 65
           RHPIY+G+RQR +GKWV E+REP K +RIWLGTFPT EMAA A+DVAALAL+G+ A LNF
Sbjct: 50  RHPIYRGVRQRNSGKWVCEVREPNKKSRIWLGTFPTVEMAARAHDVAALALRGRSACLNF 109

Query: 66  PNSAASLPVPASRSASDIQAAAASAAAALGAAAAAMEARNNNGRARSNFSGTNSSYGTRY 125
            +SA  L +P +    +IQ AA+ AA A         ++          +G     G R 
Sbjct: 110 ADSAWRLRIPETTCPKEIQKAASEAAMAFQNETTTEGSK--TAAEAEEAAGEGVREGERR 169

Query: 126 NENELGNQF-VDEDLIFDMPNVLMNMAEGMLLSPPRFNVHGNDDRDDGGDQNLWNF 181
            E + G  F +D++ +  MPN   NMAEGMLL PP    + N D D  GD +LW+F
Sbjct: 170 AEEQNGGVFYMDDEALLGMPNFFENMAEGMLLPPPEVGWNHN-DFDGVGDVSLWSF 222

[Close]

BLAST of CmoCh14G002760 vs. TAIR 10
Match: AT5G52020.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 129.0 bits (323), Expect = 3.8e-30
Identity = 81/180 (45.00%), Postives = 106/180 (58.89%), Query Frame = 0


Query: 4   SARHPIYKGIRQRTTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQDAEL 63
           S +H I++GIR R  GKWVSEIREPRK  RIWLGT+P  EMAA AYDVAALALKG DA L
Sbjct: 59  SGKHSIFRGIRLR-NGKWVSEIREPRKTTRIWLGTYPVPEMAAAAYDVAALALKGPDAVL 118

Query: 64  NFPNSAASLPVPASRSASDIQAAAASAAAALGAAAAAMEARNNNGRARSNFSGTNSSYGT 123
           NFP  A +   P S SA+DI+AAA+       AA      +  + +              
Sbjct: 119 NFPGLALTYVAPVSNSAADIRAAASR------AAEMKQPDQGGDEKVLEPVQPGKEEELE 178

Query: 124 RYNENELGNQFVDEDLIFDMPNVLMNMAEGMLLSPPRFNVH---GNDDRDDGGDQNLWNF 181
             + N    +F+DE+ + +MP +L  MAEGML+SPPR  +H    +D  ++    NLW++
Sbjct: 179 EVSCNSCSLEFMDEEAMLNMPTLLTEMAEGMLMSPPRMMIHPTMEDDSPENHEGDNLWSY 231

The following BLAST results are available for this feature:

BLAST of CmoCh14G002760 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SJR0	2.2e-51	65.03	Ethylene-responsive transcription factor ERF024 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q38Q39	2.2e-35	47.06	Ethylene-responsive transcription factor ERF027 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9CAN9	6.7e-32	46.96	Ethylene-responsive transcription factor ERF026 OS=Arabidopsis thaliana OX=3702 ...	[more]
P93835	8.8e-32	49.14	Dehydration-responsive element-binding protein 1B OS=Arabidopsis thaliana OX=370...	[more]
Q9FJ93	6.3e-30	47.16	Dehydration-responsive element-binding protein 1D OS=Arabidopsis thaliana OX=370...	[more]

BLAST of CmoCh14G002760 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F5U1	1.6e-92	100.00	ethylene-responsive transcription factor ERF024-like OS=Cucurbita moschata OX=36...	[more]
A0A6J1J6V1	5.8e-87	95.58	ethylene-responsive transcription factor ERF024-like OS=Cucurbita maxima OX=3661...	[more]
A0A0A0LBA2	1.7e-70	82.97	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G751430 PE=...	[more]
A0A6J1CUD0	3.8e-70	78.61	ethylene-responsive transcription factor ERF024 OS=Momordica charantia OX=3673 G...	[more]
A0A5A7TQS0	1.2e-68	81.32	Ethylene-responsive transcription factor ERF024-like protein OS=Cucumis melo var...	[more]

BLAST of CmoCh14G002760 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G36450.1	1.6e-52	65.03	Integrase-type DNA-binding superfamily protein	[more]
AT1G12630.1	1.6e-36	47.06	Integrase-type DNA-binding superfamily protein	[more]
AT4G25490.1	6.2e-33	49.14	C-repeat/DRE binding factor 1	[more]
AT5G51990.1	4.5e-31	47.16	C-repeat-binding factor 4	[more]
AT5G52020.1	3.8e-30	45.00	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 32..48 score: 66.42 coord: 10..21 score: 51.67
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 9..72 e-value: 1.6E-33 score: 127.4
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 8..58 e-value: 2.0E-11 score: 44.0
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 9..66 score: 22.207401
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 8..68 e-value: 2.10577E-30 score: 103.891
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 9..68 e-value: 1.9E-23 score: 84.3
None	No IPR available	PANTHER	PTHR31985	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED	coord: 3..181
None	No IPR available	PANTHER	PTHR31985:SF121	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF024	coord: 3..181
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 9..68

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh14G002760.1	CmoCh14G002760.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity