CmoCh14G002550 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGCAATCGACGGGAAGGAGAAGGTGACGATTCGAGACGTCAGCCACGACGAGGAAGGAATAAAGCTAATCGAAAAGGCGAAGATCGACTCTCGCAACATCGACACCATTAGGTACGTTGAGAGGAAGCTCATTGACAAGGGATTCCAGCGTCTTGAACGCCAGCCGGTTCAACCGCCGCCCAAGTCCGGCCATGGCGGCAAGTTCACTTGGGAAGGACCCCGCGATTCCATTCAGAACGAGCTCTTCCCCGCCCCGGCTGCCATTGATGAGAACGATCCGAACTATGTGGATGAAGTGAAGGAGAAGGAGGAGGAGGTCGCCGGATTGGTGGTCGGTGAAGTGGAGGTGGCCAAGGCGGCGGAGGTCACGGAGGGGGTTGGGAGAGTGGAGGTGGATCCTCGGCTTCAACTGCAGTGA ATGGAGGCAATCGACGGGAAGGAGAAGGTGACGATTCGAGACGTCAGCCACGACGAGGAAGGAATAAAGCTAATCGAAAAGGCGAAGATCGACTCTCGCAACATCGACACCATTAGGTACGTTGAGAGGAAGCTCATTGACAAGGGATTCCAGCGTCTTGAACGCCAGCCGGTTCAACCGCCGCCCAAGTCCGGCCATGGCGGCAAGTTCACTTGGGAAGGACCCCGCGATTCCATTCAGAACGAGCTCTTCCCCGCCCCGGCTGCCATTGATGAGAACGATCCGAACTATGTGGATGAAGTGAAGGAGAAGGAGGAGGAGGTCGCCGGATTGGTGGTCGGTGAAGTGGAGGTGGCCAAGGCGGCGGAGGTCACGGAGGGGGTTGGGAGAGTGGAGGTGGATCCTCGGCTTCAACTGCAGTGA ATGGAGGCAATCGACGGGAAGGAGAAGGTGACGATTCGAGACGTCAGCCACGACGAGGAAGGAATAAAGCTAATCGAAAAGGCGAAGATCGACTCTCGCAACATCGACACCATTAGGTACGTTGAGAGGAAGCTCATTGACAAGGGATTCCAGCGTCTTGAACGCCAGCCGGTTCAACCGCCGCCCAAGTCCGGCCATGGCGGCAAGTTCACTTGGGAAGGACCCCGCGATTCCATTCAGAACGAGCTCTTCCCCGCCCCGGCTGCCATTGATGAGAACGATCCGAACTATGTGGATGAAGTGAAGGAGAAGGAGGAGGAGGTCGCCGGATTGGTGGTCGGTGAAGTGGAGGTGGCCAAGGCGGCGGAGGTCACGGAGGGGGTTGGGAGAGTGGAGGTGGATCCTCGGCTTCAACTGCAGTGA MEAIDGKEKVTIRDVSHDEEGIKLIEKAKIDSRNIDTIRYVERKLIDKGFQRLERQPVQPPPKSGHGGKFTWEGPRDSIQNELFPAPAAIDENDPNYVDEVKEKEEEVAGLVVGEVEVAKAAEVTEGVGRVEVDPRLQLQ Homology
BLAST of CmoCh14G002550 vs. ExPASy TrEMBL
Match: A0A6J1F3B2 (uncharacterized protein LOC111441751 OS=Cucurbita moschata OX=3662 GN=LOC111441751 PE=4 SV=1) HSP 1 Score: 273.9 bits (699), Expect = 3.8e-70 Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0
BLAST of CmoCh14G002550 vs. ExPASy TrEMBL
Match: A0A6J1J5N9 (uncharacterized protein LOC111481977 OS=Cucurbita maxima OX=3661 GN=LOC111481977 PE=4 SV=1) HSP 1 Score: 241.1 bits (614), Expect = 2.7e-60 Identity = 124/128 (96.88%), Postives = 125/128 (97.66%), Query Frame = 0
BLAST of CmoCh14G002550 vs. ExPASy TrEMBL
Match: A0A6J1F9T7 (uncharacterized protein LOC111442115 OS=Cucurbita moschata OX=3662 GN=LOC111442115 PE=4 SV=1) HSP 1 Score: 213.4 bits (542), Expect = 6.1e-52 Identity = 115/143 (80.42%), Postives = 123/143 (86.01%), Query Frame = 0
BLAST of CmoCh14G002550 vs. ExPASy TrEMBL
Match: A0A6J1J6Y7 (uncharacterized protein LOC111481791 OS=Cucurbita maxima OX=3661 GN=LOC111481791 PE=4 SV=1) HSP 1 Score: 213.0 bits (541), Expect = 8.0e-52 Identity = 116/143 (81.12%), Postives = 123/143 (86.01%), Query Frame = 0
BLAST of CmoCh14G002550 vs. ExPASy TrEMBL
Match: A0A5A7TM42 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G003410 PE=4 SV=1) HSP 1 Score: 194.1 bits (492), Expect = 3.8e-46 Identity = 108/148 (72.97%), Postives = 120/148 (81.08%), Query Frame = 0
BLAST of CmoCh14G002550 vs. TAIR 10
Match: AT3G10020.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress, anaerobic respiration; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 47 Blast hits to 47 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 118.6 bits (296), Expect = 4.0e-27 Identity = 72/139 (51.80%), Postives = 93/139 (66.91%), Query Frame = 0
BLAST of CmoCh14G002550 vs. TAIR 10
Match: AT3G10020.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress, anaerobic respiration; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 99.8 bits (247), Expect = 1.9e-21 Identity = 58/119 (48.74%), Postives = 79/119 (66.39%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|