CmoCh14G002310 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh14G002310
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	thaumatin-like protein 1b
Location	Cmo_Chr14: 1063909 .. 1064890 (+)
RNA-Seq Expression	CmoCh14G002310
Synteny	CmoCh14G002310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCAGTTTACAAATTGAAGGTGTCGGAAATGGCGAGCCAAGCAGTCCTTGTTGCAACGTTCTTGTTCTTCGTCCTCCGTTTTGGTACGATATTGTTTCTTTCTCGAGATGTTAGTAATAATAATGTTTAGTTCGTTTGATCACGTCATTATATTATTTCAGGGGCGGAAGCTGCTACGATAACGGTGAGGAACAATTGTCCGAGAACCATATGGCCAGCAACATTAACAAGCGGTCCAGGACAACCTCAACTATCAACAACTGGATTCGAATTAGCTCCCGGAGCGTCAAGGTCGTTTAACGTCCCAGCGCCATGGACCGGTCGAGTATGGGCAAGAACCCGATGCTCCAACAACGGTGGACGTTTCACTTGCTTGACAGGAGATTGCGGTCGTGGGCTCTCATGCAATGGCGCAGGAGGAGTCCCACCAGCGACGTTAGCTGAATTCACGGTCGCCCCGAACGGCGGGCAAGATTTCTATGATGTCAGCCTCGTCGATGGCTTCAACATTCCAACCACCATCGTGGCCCAAGGCGGGACAGGGCCATGCAGATCCTCCAACTGCCGTAATGACGTGAATAGGGTATGTCCAGGGGAATTGCAAGTGAGATCGGGCAACGAAGTGATTGGTTGCAAGAGTGCTTGCTTTGCATTCAACCAGCCTCAGTATTGCTGCACCGGAGCGTTCAATGACCCTAACAAGTGCAGGCCAACAAACTACTCAATGATTTTCGAGAACCAATGCCCGGATGCTTATAGCTACGCATATGATGATAAGAACAGCACTTTCACTTGCAACAACAGGCCAAATTATGTCATCACATTCTGCGGTTGAGAACAATAACTACAAATAATTAAGAATAAAGATATAACACCGTACAGTGTTATATGAACAAACTTGACAAAGTCTTATCTTATGTCAAGTCCATATTTCTGCATTAAATATTAATAAAGAAAGAAAATAAAATCCAACTTCCAATTTA

mRNA sequence

TCAGTTTACAAATTGAAGGTGTCGGAAATGGCGAGCCAAGCAGTCCTTGTTGCAACGTTCTTGTTCTTCGTCCTCCGTTTTGGGGCGGAAGCTGCTACGATAACGGTGAGGAACAATTGTCCGAGAACCATATGGCCAGCAACATTAACAAGCGGTCCAGGACAACCTCAACTATCAACAACTGGATTCGAATTAGCTCCCGGAGCGTCAAGGTCGTTTAACGTCCCAGCGCCATGGACCGGTCGAGTATGGGCAAGAACCCGATGCTCCAACAACGGTGGACGTTTCACTTGCTTGACAGGAGATTGCGGTCGTGGGCTCTCATGCAATGGCGCAGGAGGAGTCCCACCAGCGACGTTAGCTGAATTCACGGTCGCCCCGAACGGCGGGCAAGATTTCTATGATGTCAGCCTCGTCGATGGCTTCAACATTCCAACCACCATCGTGGCCCAAGGCGGGACAGGGCCATGCAGATCCTCCAACTGCCGTAATGACGTGAATAGGGTATGTCCAGGGGAATTGCAAGTGAGATCGGGCAACGAAGTGATTGGTTGCAAGAGTGCTTGCTTTGCATTCAACCAGCCTCAGTATTGCTGCACCGGAGCGTTCAATGACCCTAACAAGTGCAGGCCAACAAACTACTCAATGATTTTCGAGAACCAATGCCCGGATGCTTATAGCTACGCATATGATGATAAGAACAGCACTTTCACTTGCAACAACAGGCCAAATTATGTCATCACATTCTGCGGTTGAGAACAATAACTACAAATAATTAAGAATAAAGATATAACACCGTACAGTGTTATATGAACAAACTTGACAAAGTCTTATCTTATGTCAAGTCCATATTTCTGCATTAAATATTAATAAAGAAAGAAAATAAAATCCAACTTCCAATTTA

Coding sequence (CDS)

ATGGCGAGCCAAGCAGTCCTTGTTGCAACGTTCTTGTTCTTCGTCCTCCGTTTTGGGGCGGAAGCTGCTACGATAACGGTGAGGAACAATTGTCCGAGAACCATATGGCCAGCAACATTAACAAGCGGTCCAGGACAACCTCAACTATCAACAACTGGATTCGAATTAGCTCCCGGAGCGTCAAGGTCGTTTAACGTCCCAGCGCCATGGACCGGTCGAGTATGGGCAAGAACCCGATGCTCCAACAACGGTGGACGTTTCACTTGCTTGACAGGAGATTGCGGTCGTGGGCTCTCATGCAATGGCGCAGGAGGAGTCCCACCAGCGACGTTAGCTGAATTCACGGTCGCCCCGAACGGCGGGCAAGATTTCTATGATGTCAGCCTCGTCGATGGCTTCAACATTCCAACCACCATCGTGGCCCAAGGCGGGACAGGGCCATGCAGATCCTCCAACTGCCGTAATGACGTGAATAGGGTATGTCCAGGGGAATTGCAAGTGAGATCGGGCAACGAAGTGATTGGTTGCAAGAGTGCTTGCTTTGCATTCAACCAGCCTCAGTATTGCTGCACCGGAGCGTTCAATGACCCTAACAAGTGCAGGCCAACAAACTACTCAATGATTTTCGAGAACCAATGCCCGGATGCTTATAGCTACGCATATGATGATAAGAACAGCACTTTCACTTGCAACAACAGGCCAAATTATGTCATCACATTCTGCGGTTGA

Protein sequence

MASQAVLVATFLFFVLRFGAEAATITVRNNCPRTIWPATLTSGPGQPQLSTTGFELAPGASRSFNVPAPWTGRVWARTRCSNNGGRFTCLTGDCGRGLSCNGAGGVPPATLAEFTVAPNGGQDFYDVSLVDGFNIPTTIVAQGGTGPCRSSNCRNDVNRVCPGELQVRSGNEVIGCKSACFAFNQPQYCCTGAFNDPNKCRPTNYSMIFENQCPDAYSYAYDDKNSTFTCNNRPNYVITFCG

Homology

[Close]

BLAST of CmoCh14G002310 vs. ExPASy Swiss-Prot
Match: Q9FSG7 (Thaumatin-like protein 1a OS=Malus domestica OX=3750 GN=TL1 PE=1 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 3.2e-82
Identity = 151/244 (61.89%), Postives = 176/244 (72.13%), Query Frame = 0


Query: 1   MASQAVLVATFLFFVLRFGAEAATITVRNNCPRTIWPATLTSGPGQPQLSTTGFELAPGA 60
           +AS   L    LFF    GA AA IT  NNCP T+WP TLT G  +PQLS TGFELA  A
Sbjct: 6   VASLLGLTLAILFF---SGAHAAKITFTNNCPNTVWPGTLT-GDQKPQLSLTGFELASKA 65

Query: 61  SRSFNVPAPWTGRVWARTRCSNN-GGRFTCLTGDCGRG-LSCNGAGGVPPATLAEFTVAP 120
           SRS + P+PW+GR W RTRCS +  G+FTC T DCG G ++CNGAG VPPATL E T+A 
Sbjct: 66  SRSVDAPSPWSGRFWGRTRCSTDAAGKFTCETADCGSGQVACNGAGAVPPATLVEITIAA 125

Query: 121 NGGQDFYDVSLVDGFNIPTTIVAQGGTGPCRSSNCRNDVNRVCPGELQVRSGN-EVIGCK 180
           NGGQD+YDVSLVDGFN+P ++  QGGTG C+ S+C  +VN+VCP  LQV++ +  VI CK
Sbjct: 126 NGGQDYYDVSLVDGFNLPMSVAPQGGTGECKPSSCPANVNKVCPAPLQVKAADGSVISCK 185

Query: 181 SACFAFNQPQYCCTGAFNDPNKCRPTNYSMIFENQCPDAYSYAYDDKNSTFTCNNRPNYV 240
           SAC AF   +YCCT   N P  C PT YS IFE QCP AYSYAYDDKNSTFTC+  P+YV
Sbjct: 186 SACLAFGDSKYCCTPPNNTPETCPPTEYSEIFEKQCPQAYSYAYDDKNSTFTCSGGPDYV 245

Query: 241 ITFC 242
           ITFC
Sbjct: 246 ITFC 245

[Close]

BLAST of CmoCh14G002310 vs. ExPASy Swiss-Prot
Match: P83332 (Thaumatin-like protein 1 OS=Prunus persica OX=3760 PE=2 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 8.0e-81
Identity = 148/245 (60.41%), Postives = 176/245 (71.84%), Query Frame = 0


Query: 1   MASQAVLVATFLFFVLRF-GAEAATITVRNNCPRTIWPATLTSGPGQPQLSTTGFELAPG 60
           M SQA L+      +L F GA AA IT  N C  T+WP TLT G  +PQLS TGFELA G
Sbjct: 2   MKSQAALLGLTTLAILFFSGAHAAKITFTNKCSYTVWPGTLT-GDQKPQLSLTGFELATG 61

Query: 61  ASRSFNVPAPWTGRVWARTRCSNN-GGRFTCLTGDCGRG-LSCNGAGGVPPATLAEFTVA 120
            SRS + P+PW+GR + RTRCS +  G+FTC T DCG G +SCNG G  PPATL E T+A
Sbjct: 62  ISRSVDAPSPWSGRFFGRTRCSTDASGKFTCATADCGSGQVSCNGNGAAPPATLVEITIA 121

Query: 121 PNGGQDFYDVSLVDGFNIPTTIVAQGGTGPCRSSNCRNDVNRVCPGELQVR-SGNEVIGC 180
            NGGQDFYDVSLVDGFN+P ++  QGGTG C++S C  D+N+VCP  LQV+ S   VI C
Sbjct: 122 SNGGQDFYDVSLVDGFNLPMSVAPQGGTGKCKASTCPADINKVCPAPLQVKGSDGSVIAC 181

Query: 181 KSACFAFNQPQYCCTGAFNDPNKCRPTNYSMIFENQCPDAYSYAYDDKNSTFTCNNRPNY 240
           KSAC AFNQP+YCCT   + P  C P +YS +F+ QCP AYSYAYDDK+STFTC+ RP Y
Sbjct: 182 KSACLAFNQPKYCCTPPNDKPETCPPPDYSKLFKTQCPQAYSYAYDDKSSTFTCSGRPAY 241

Query: 241 VITFC 242
           +ITFC
Sbjct: 242 LITFC 245

[Close]

BLAST of CmoCh14G002310 vs. ExPASy Swiss-Prot
Match: O80327 (Thaumatin-like protein 1 OS=Pyrus pyrifolia OX=3767 GN=TL1 PE=1 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 8.9e-80
Identity = 142/244 (58.20%), Postives = 173/244 (70.90%), Query Frame = 0


Query: 1   MASQAVLVATFLFFVLRFGAEAATITVRNNCPRTIWPATLTSGPGQPQLSTTGFELAPGA 60
           M  +A++    +F     G  +A  T  N CP T+WP TLT G G PQL +TGFELA GA
Sbjct: 1   MKFEALIGLVLVFLSEHAGVYSAKFTFTNKCPNTVWPGTLTGG-GGPQLLSTGFELASGA 60

Query: 61  SRSFNVPAPWTGRVWARTRCS-NNGGRFTCLTGDCGRG-LSCNGAGGVPPATLAEFTVAP 120
           S S  V APW+GR W R+ CS ++ G+F C TGDCG G +SCNGAG  PPA+L E T+A 
Sbjct: 61  STSLTVQAPWSGRFWGRSHCSIDSSGKFKCSTGDCGSGQISCNGAGASPPASLVELTLAT 120

Query: 121 NGGQDFYDVSLVDGFNIPTTIVAQGGTGPCRSSNCRNDVNRVCPGELQVR-SGNEVIGCK 180
           NGGQDFYDVSLVDGFN+P  +  +GG+G C S++C  ++N VCP EL  + S   VIGCK
Sbjct: 121 NGGQDFYDVSLVDGFNLPIKLAPRGGSGDCNSTSCAANINTVCPAELSDKGSDGSVIGCK 180

Query: 181 SACFAFNQPQYCCTGAFNDPNKCRPTNYSMIFENQCPDAYSYAYDDKNSTFTCNNRPNYV 240
           SAC A NQPQYCCTGA+  P+ C PT++S +F+NQCP AYSYAYDDK+STFTC   PNY 
Sbjct: 181 SACLALNQPQYCCTGAYGTPDTCPPTDFSKVFKNQCPQAYSYAYDDKSSTFTCFGGPNYE 240

Query: 241 ITFC 242
           ITFC
Sbjct: 241 ITFC 243

[Close]

BLAST of CmoCh14G002310 vs. ExPASy Swiss-Prot
Match: Q9SMH2 (Thaumatin-like protein 1 OS=Castanea sativa OX=21020 GN=TL1 PE=2 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 7.5e-79
Identity = 143/243 (58.85%), Postives = 171/243 (70.37%), Query Frame = 0


Query: 1   MASQAVLVATFLFFVLRFGAEAATITVRNNCPRTIWPATLTSGPGQPQLSTTGFELAPGA 60
           M + A+   T   F L  GA +A IT  NNCPRTIWP TLTS   +PQL  TGF LA  A
Sbjct: 2   MKTLALYGLTLALFFLS-GAHSAKITFTNNCPRTIWPGTLTSDQ-KPQLPNTGFVLASKA 61

Query: 61  SRSFNVPAPWTGRVWARTRCSNNGGRFTCLTGDCGRG-LSCNGAGGVPPATLAEFTVAPN 120
           S +  V APW GR WARTRC+ N G+FTC T DC  G ++CNG G +PPA+L E  +A N
Sbjct: 62  SLTLGVQAPWKGRFWARTRCTTNSGKFTCETADCSTGQVACNGNGAIPPASLVEINIAAN 121

Query: 121 GGQDFYDVSLVDGFNIPTTIVAQGGTGPCRSSNCRNDVNRVCPGELQVR-SGNEVIGCKS 180
            G DFYDVSLVDG+N+P ++  +GGTG C++++CR +VN VCP ELQV+ S   V+ CKS
Sbjct: 122 RGMDFYDVSLVDGYNLPVSVATRGGTGDCKATSCRANVNAVCPAELQVKGSDASVLACKS 181

Query: 181 ACFAFNQPQYCCTGAFNDPNKCRPTNYSMIFENQCPDAYSYAYDDKNSTFTCNNRPNYVI 240
           AC AFNQPQYCCTGAF+    C  T YS IF+ QCP AYSYAYDD  STFTC+  P+YVI
Sbjct: 182 ACTAFNQPQYCCTGAFDTARTCPATKYSRIFKQQCPQAYSYAYDDSTSTFTCSGAPDYVI 241

Query: 241 TFC 242
           TFC
Sbjct: 242 TFC 242

[Close]

BLAST of CmoCh14G002310 vs. ExPASy Swiss-Prot
Match: P50694 (Glucan endo-1,3-beta-glucosidase OS=Prunus avium OX=42229 PE=1 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 8.3e-78
Identity = 143/245 (58.37%), Postives = 166/245 (67.76%), Query Frame = 0


Query: 1   MASQAVLVATFLFFVLRF-GAEAATITVRNNCPRTIWPATLTSGPGQPQLSTTGFELAPG 60
           M    V+V +    +L F GA AATI+ +NNCP  +WP TLTS   +PQLSTTGFELA  
Sbjct: 1   MMKTLVVVLSLSLTILSFGGAHAATISFKNNCPYMVWPGTLTSDQ-KPQLSTTGFELASQ 60

Query: 61  ASRSFNVPAPWTGRVWARTRCSNN-GGRFTCLTGDCGRG-LSCNGAGGVPPATLAEFTVA 120
           AS   + P PW GR WART CS +  G+F C T DC  G + CNG G +PPATLAEF + 
Sbjct: 61  ASFQLDTPVPWNGRFWARTGCSTDASGKFVCATADCASGQVMCNGNGAIPPATLAEFNIP 120

Query: 121 PNGGQDFYDVSLVDGFNIPTTIVAQGGTGPCRSSNCRNDVNRVCPGELQVR-SGNEVIGC 180
             GGQDFYDVSLVDGFN+P ++  QGGTG C++++C  +VN VCP ELQ + S   V+ C
Sbjct: 121 AGGGQDFYDVSLVDGFNLPMSVTPQGGTGDCKTASCPANVNAVCPSELQKKGSDGSVVAC 180

Query: 181 KSACFAFNQPQYCCTGAFNDPNKCRPTNYSMIFENQCPDAYSYAYDDKNSTFTCNNRPNY 240
            SAC  F  PQYCCT   N P  C PTNYS IF N CPDAYSYAYDDK  TFTCN  PNY
Sbjct: 181 LSACVKFGTPQYCCTPPQNTPETCPPTNYSEIFHNACPDAYSYAYDDKRGTFTCNGGPNY 240

Query: 241 VITFC 242
            ITFC
Sbjct: 241 AITFC 244

[Close]

BLAST of CmoCh14G002310 vs. ExPASy TrEMBL
Match: A0A6J1FAR1 (thaumatin-like protein 1b OS=Cucurbita moschata OX=3662 GN=LOC111442363 PE=3 SV=1)

HSP 1 Score: 516.2 bits (1328), Expect = 7.6e-143
Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 0


Query: 1   MASQAVLVATFLFFVLRFGAEAATITVRNNCPRTIWPATLTSGPGQPQLSTTGFELAPGA 60
           MASQAVLVATFLFFVLRFGAEAATITVRNNCPRTIWPATLTSGPGQPQLSTTGFELAPGA
Sbjct: 1   MASQAVLVATFLFFVLRFGAEAATITVRNNCPRTIWPATLTSGPGQPQLSTTGFELAPGA 60

Query: 61  SRSFNVPAPWTGRVWARTRCSNNGGRFTCLTGDCGRGLSCNGAGGVPPATLAEFTVAPNG 120
           SRSFNVPAPWTGRVWARTRCSNNGGRFTCLTGDCGRGLSCNGAGGVPPATLAEFTVAPNG
Sbjct: 61  SRSFNVPAPWTGRVWARTRCSNNGGRFTCLTGDCGRGLSCNGAGGVPPATLAEFTVAPNG 120

Query: 121 GQDFYDVSLVDGFNIPTTIVAQGGTGPCRSSNCRNDVNRVCPGELQVRSGNEVIGCKSAC 180
           GQDFYDVSLVDGFNIPTTIVAQGGTGPCRSSNCRNDVNRVCPGELQVRSGNEVIGCKSAC
Sbjct: 121 GQDFYDVSLVDGFNIPTTIVAQGGTGPCRSSNCRNDVNRVCPGELQVRSGNEVIGCKSAC 180

Query: 181 FAFNQPQYCCTGAFNDPNKCRPTNYSMIFENQCPDAYSYAYDDKNSTFTCNNRPNYVITF 240
           FAFNQPQYCCTGAFNDPNKCRPTNYSMIFENQCPDAYSYAYDDKNSTFTCNNRPNYVITF
Sbjct: 181 FAFNQPQYCCTGAFNDPNKCRPTNYSMIFENQCPDAYSYAYDDKNSTFTCNNRPNYVITF 240

Query: 241 CG 243
           CG
Sbjct: 241 CG 242

[Close]

BLAST of CmoCh14G002310 vs. ExPASy TrEMBL
Match: A0A6J1J147 (thaumatin-like protein 1b OS=Cucurbita maxima OX=3661 GN=LOC111481738 PE=3 SV=1)

HSP 1 Score: 496.1 bits (1276), Expect = 8.2e-137
Identity = 230/242 (95.04%), Postives = 235/242 (97.11%), Query Frame = 0


Query: 1   MASQAVLVATFLFFVLRFGAEAATITVRNNCPRTIWPATLTSGPGQPQLSTTGFELAPGA 60
           MASQ VLVA+FLF +L FGAEAATITVRNNCP+TIWPATLTSGPGQPQLSTTGFELAPGA
Sbjct: 1   MASQVVLVASFLFLLLSFGAEAATITVRNNCPKTIWPATLTSGPGQPQLSTTGFELAPGA 60

Query: 61  SRSFNVPAPWTGRVWARTRCSNNGGRFTCLTGDCGRGLSCNGAGGVPPATLAEFTVAPNG 120
           SRSFNVPAPWTGRVWARTRCSNNGGRFTCLTGDCGRGLSCNGAGGVPPATLAEFTVAPNG
Sbjct: 61  SRSFNVPAPWTGRVWARTRCSNNGGRFTCLTGDCGRGLSCNGAGGVPPATLAEFTVAPNG 120

Query: 121 GQDFYDVSLVDGFNIPTTIVAQGGTGPCRSSNCRNDVNRVCPGELQVRSGNEVIGCKSAC 180
           GQDFYDVSLVDGFNIP +I  QGGTGPCRSSNCRNDVNRVCPGELQVRSGNEVIGCKSAC
Sbjct: 121 GQDFYDVSLVDGFNIPASITTQGGTGPCRSSNCRNDVNRVCPGELQVRSGNEVIGCKSAC 180

Query: 181 FAFNQPQYCCTGAFNDPNKCRPTNYSMIFENQCPDAYSYAYDDKNSTFTCNNRPNYVITF 240
           FAFNQP+YCCTG FNDPNKCRPTNYSMIFENQCPDAYSYAYDDKNSTFTCNNRPNYVITF
Sbjct: 181 FAFNQPRYCCTGEFNDPNKCRPTNYSMIFENQCPDAYSYAYDDKNSTFTCNNRPNYVITF 240

Query: 241 CG 243
           CG
Sbjct: 241 CG 242

[Close]

BLAST of CmoCh14G002310 vs. ExPASy TrEMBL
Match: A0A1S3B6E5 (thaumatin-like protein 1b OS=Cucumis melo OX=3656 GN=LOC103486525 PE=3 SV=1)

HSP 1 Score: 464.2 bits (1193), Expect = 3.4e-127
Identity = 213/242 (88.02%), Postives = 224/242 (92.56%), Query Frame = 0


Query: 1   MASQAVLVATFLFFVLRFGAEAATITVRNNCPRTIWPATLTSGPGQPQLSTTGFELAPGA 60
           MA+ A+L+++F FF+L FGAEAATITVRNNCP TIWPATLTSGPGQPQLSTTGFELA GA
Sbjct: 1   MANHALLLSSFFFFLLHFGAEAATITVRNNCPTTIWPATLTSGPGQPQLSTTGFELARGA 60

Query: 61  SRSFNVPAPWTGRVWARTRCSNNGGRFTCLTGDCGRGLSCNGAGGVPPATLAEFTVAPNG 120
           SRSF VPAPWTGRVWART CSNNGGRF CLTGDCGRGLSCNGAGGVPPATLAEFT+AP G
Sbjct: 61  SRSFTVPAPWTGRVWARTHCSNNGGRFNCLTGDCGRGLSCNGAGGVPPATLAEFTIAPGG 120

Query: 121 GQDFYDVSLVDGFNIPTTIVAQGGTGPCRSSNCRNDVNRVCPGELQVRSGNEVIGCKSAC 180
           GQDFYDVSLVDGFN+P +I  QGGTGPCRSSNCR DVNRVCPGELQV+SGNEVI CKSAC
Sbjct: 121 GQDFYDVSLVDGFNVPASITIQGGTGPCRSSNCRADVNRVCPGELQVKSGNEVIACKSAC 180

Query: 181 FAFNQPQYCCTGAFNDPNKCRPTNYSMIFENQCPDAYSYAYDDKNSTFTCNNRPNYVITF 240
            AFNQP+YCCTG FNDPNKC PTNYSMIFE QCPDAYSYAYDDKNSTFTCNNRPNYVITF
Sbjct: 181 VAFNQPRYCCTGEFNDPNKCTPTNYSMIFERQCPDAYSYAYDDKNSTFTCNNRPNYVITF 240

Query: 241 CG 243
           CG
Sbjct: 241 CG 242

[Close]

BLAST of CmoCh14G002310 vs. ExPASy TrEMBL
Match: A0A5D3DNI8 (Thaumatin-like protein 1b OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G002970 PE=3 SV=1)

HSP 1 Score: 447.2 bits (1149), Expect = 4.4e-122
Identity = 204/224 (91.07%), Postives = 209/224 (93.30%), Query Frame = 0


Query: 19  GAEAATITVRNNCPRTIWPATLTSGPGQPQLSTTGFELAPGASRSFNVPAPWTGRVWART 78
           GAEAATITVRNNCP TIWPATLTSGPGQPQLSTTGFELA GASRSF VPAPWTGRVWART
Sbjct: 9   GAEAATITVRNNCPTTIWPATLTSGPGQPQLSTTGFELARGASRSFTVPAPWTGRVWART 68

Query: 79  RCSNNGGRFTCLTGDCGRGLSCNGAGGVPPATLAEFTVAPNGGQDFYDVSLVDGFNIPTT 138
            CSNNGGRF CLTGDCGRGLSCNGAGGVPPATLAEFT+AP GGQDFYDVSLVDGFN+P +
Sbjct: 69  HCSNNGGRFNCLTGDCGRGLSCNGAGGVPPATLAEFTIAPGGGQDFYDVSLVDGFNVPAS 128

Query: 139 IVAQGGTGPCRSSNCRNDVNRVCPGELQVRSGNEVIGCKSACFAFNQPQYCCTGAFNDPN 198
           I  QGGTGPCRSSNCR DVNRVCPGELQV+SGNEVI CKSAC AFNQP+YCCTG FNDPN
Sbjct: 129 ITIQGGTGPCRSSNCRADVNRVCPGELQVKSGNEVIACKSACVAFNQPRYCCTGEFNDPN 188

Query: 199 KCRPTNYSMIFENQCPDAYSYAYDDKNSTFTCNNRPNYVITFCG 243
           KC PTNYSMIFE QCPDAYSYAYDDKNSTFTCNNRPNYVITFCG
Sbjct: 189 KCTPTNYSMIFERQCPDAYSYAYDDKNSTFTCNNRPNYVITFCG 232

[Close]

BLAST of CmoCh14G002310 vs. ExPASy TrEMBL
Match: A0A0A0LDS2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G743950 PE=3 SV=1)

HSP 1 Score: 438.7 bits (1127), Expect = 1.5e-119
Identity = 199/242 (82.23%), Postives = 220/242 (90.91%), Query Frame = 0


Query: 1   MASQAVLVATFLFFVLRFGAEAATITVRNNCPRTIWPATLTSGPGQPQLSTTGFELAPGA 60
           MA+ A L+++F FF+L FG EAA +TV+NNC  +IWPATLTSGPGQPQLSTTGF+LAPG 
Sbjct: 1   MANHAFLLSSFFFFLLHFGVEAAKMTVKNNCGISIWPATLTSGPGQPQLSTTGFKLAPGE 60

Query: 61  SRSFNVPAPWTGRVWARTRCSNNGGRFTCLTGDCGRGLSCNGAGGVPPATLAEFTVAPNG 120
           S+SFNVPAPWTGRVWARTRCSNN GRFTC+TGDCGRGLSCNGAGGVPP TLAEFT+AP+G
Sbjct: 61  SKSFNVPAPWTGRVWARTRCSNN-GRFTCMTGDCGRGLSCNGAGGVPPVTLAEFTIAPDG 120

Query: 121 GQDFYDVSLVDGFNIPTTIVAQGGTGPCRSSNCRNDVNRVCPGELQVRSGNEVIGCKSAC 180
           GQDFYDVSLVDGFN+P TI  QGG GPCRSSNCR DVN+VCP ELQV+SGNEVI CKSAC
Sbjct: 121 GQDFYDVSLVDGFNLPVTITIQGGKGPCRSSNCRADVNKVCPAELQVKSGNEVIACKSAC 180

Query: 181 FAFNQPQYCCTGAFNDPNKCRPTNYSMIFENQCPDAYSYAYDDKNSTFTCNNRPNYVITF 240
            AFN+P+YCCTG FNDP KC+PTNYSMIFE QCP+AYSYAYDDKNSTFTCNNRPNY+ITF
Sbjct: 181 LAFNKPEYCCTGEFNDPKKCKPTNYSMIFERQCPEAYSYAYDDKNSTFTCNNRPNYLITF 240

Query: 241 CG 243
           CG
Sbjct: 241 CG 241

[Close]

BLAST of CmoCh14G002310 vs. TAIR 10
Match: AT1G75040.1 (pathogenesis-related gene 5 )

HSP 1 Score: 259.2 bits (661), Expect = 3.2e-69
Identity = 135/243 (55.56%), Postives = 163/243 (67.08%), Query Frame = 0


Query: 1   MASQAVLVATFLFFVLRFGAEAAT-ITVRNNCPRTIWPATLTSGPGQPQLSTTGFELAPG 60
           MA+ + +   FL F+    A  AT  T+RNNCP T+W  TL +G G P+L   GFEL PG
Sbjct: 1   MANISSIHILFLVFITSGIAVMATDFTLRNNCPTTVWAGTL-AGQG-PKLGDGGFELTPG 60

Query: 61  ASRSFNVPAPWTGRVWARTRCS-NNGGRFTCLTGDCGRGLSCNGAGGVPPATLAEFTVAP 120
           ASR    PA W+GR WART C+ +  G   C+TGDCG GL CNG GGVPP TLAEFT+  
Sbjct: 61  ASRQLTAPAGWSGRFWARTGCNFDASGNGRCVTGDCG-GLRCNG-GGVPPVTLAEFTLVG 120

Query: 121 NGGQDFYDVSLVDGFNIPTTIVAQGGTGPCRSSNCRNDVNRVCPGELQVRSGNEVIGCKS 180
           +GG+DFYDVSLVDG+N+   I   GG+G C+ + C +D+N  CP  L+V   N V+ CKS
Sbjct: 121 DGGKDFYDVSLVDGYNVKLGIRPSGGSGDCKYAGCVSDLNAACPDMLKVMDQNNVVACKS 180

Query: 181 ACFAFNQPQYCCTGAFNDPNKCRPTNYSMIFENQCPDAYSYAYDDKNSTFTCNNRPNYVI 240
           AC  FN  QYCC GA + P  C PT+YS IF+N CPDAYSYAYDD+ STFTC    NY I
Sbjct: 181 ACERFNTDQYCCRGANDKPETCPPTDYSRIFKNACPDAYSYAYDDETSTFTCTG-ANYEI 238

Query: 241 TFC 242
           TFC
Sbjct: 241 TFC 238

[Close]

BLAST of CmoCh14G002310 vs. TAIR 10
Match: AT1G20030.2 (Pathogenesis-related thaumatin superfamily protein )

HSP 1 Score: 258.5 bits (659), Expect = 5.5e-69
Identity = 130/245 (53.06%), Postives = 162/245 (66.12%), Query Frame = 0


Query: 7   LVATFLFFVLRF---GAEAATITVRNNCPRTIWPATLTSGPGQPQLSTTGFELAPGASRS 66
           +  TF F +      G  + + T  N C  T+WP  L S  G   L TTGF L  G +R+
Sbjct: 1   MALTFFFLLSNLFFSGVMSRSFTFSNKCDYTVWPGIL-SNAGVSPLPTTGFVLLKGETRT 60

Query: 67  FNVPAPWTGRVWARTRCS-NNGGRFTCLTGDCGRG-LSCNGAGGVPPATLAEFTVAPNGG 126
            N P+ W GR W RT CS ++ G+F+C TGDCG G + C+GAG  PPATLAEFT+  +GG
Sbjct: 61  INAPSSWGGRFWGRTLCSTDSDGKFSCATGDCGSGKIECSGAGAAPPATLAEFTLDGSGG 120

Query: 127 QDFYDVSLVDGFNIPTTIVAQGGTGP-CRSSNCRNDVNRVCPGELQVRS--GNEVI--GC 186
            DFYDVSLVDG+N+   +V QGG+G  C S+ C  D+N  CP EL+V S  G E +   C
Sbjct: 121 LDFYDVSLVDGYNVQMLVVPQGGSGQNCSSTGCVVDLNGSCPSELRVNSVDGKEAVAMAC 180

Query: 187 KSACFAFNQPQYCCTGAFNDPNKCRPTNYSMIFENQCPDAYSYAYDDKNSTFTCNNRPNY 242
           KSAC AF QP+YCC+GAF  P+ C+P+ YS IF++ CP AYSYAYDDK+STFTC   PNY
Sbjct: 181 KSACEAFRQPEYCCSGAFGSPDTCKPSTYSRIFKSACPRAYSYAYDDKSSTFTCAKSPNY 240

[Close]

BLAST of CmoCh14G002310 vs. TAIR 10
Match: AT1G20030.1 (Pathogenesis-related thaumatin superfamily protein )

HSP 1 Score: 257.7 bits (657), Expect = 9.4e-69
Identity = 126/225 (56.00%), Postives = 155/225 (68.89%), Query Frame = 0


Query: 24  TITVRNNCPRTIWPATLTSGPGQPQLSTTGFELAPGASRSFNVPAPWTGRVWARTRCS-N 83
           + T  N C  T+WP  L S  G   L TTGF L  G +R+ N P+ W GR W RT CS +
Sbjct: 4   SFTFSNKCDYTVWPGIL-SNAGVSPLPTTGFVLLKGETRTINAPSSWGGRFWGRTLCSTD 63

Query: 84  NGGRFTCLTGDCGRG-LSCNGAGGVPPATLAEFTVAPNGGQDFYDVSLVDGFNIPTTIVA 143
           + G+F+C TGDCG G + C+GAG  PPATLAEFT+  +GG DFYDVSLVDG+N+   +V 
Sbjct: 64  SDGKFSCATGDCGSGKIECSGAGAAPPATLAEFTLDGSGGLDFYDVSLVDGYNVQMLVVP 123

Query: 144 QGGTGP-CRSSNCRNDVNRVCPGELQVRS--GNEVI--GCKSACFAFNQPQYCCTGAFND 203
           QGG+G  C S+ C  D+N  CP EL+V S  G E +   CKSAC AF QP+YCC+GAF  
Sbjct: 124 QGGSGQNCSSTGCVVDLNGSCPSELRVNSVDGKEAVAMACKSACEAFRQPEYCCSGAFGS 183

Query: 204 PNKCRPTNYSMIFENQCPDAYSYAYDDKNSTFTCNNRPNYVITFC 242
           P+ C+P+ YS IF++ CP AYSYAYDDK+STFTC   PNYVITFC
Sbjct: 184 PDTCKPSTYSRIFKSACPRAYSYAYDDKSSTFTCAKSPNYVITFC 227

[Close]

BLAST of CmoCh14G002310 vs. TAIR 10
Match: AT1G75800.1 (Pathogenesis-related thaumatin superfamily protein )

HSP 1 Score: 257.3 bits (656), Expect = 1.2e-68
Identity = 127/240 (52.92%), Postives = 160/240 (66.67%), Query Frame = 0


Query: 11  FLFFVLRF--GAEAATITVRNNCPRTIWPATLTSGPGQPQLSTTGFELAPGASRSFNVPA 70
           FL F   F  G  + +  + N C  T+WP  L S  G P L TTGF L  G  R+ + P 
Sbjct: 9   FLIFSHLFVSGVRSTSFIMVNKCEYTVWPG-LLSNAGVPPLPTTGFVLQKGEERTISAPT 68

Query: 71  PWTGRVWARTRCS-NNGGRFTCLTGDCGRG-LSCNGAGGVPPATLAEFTVAPNGGQDFYD 130
            W GR W RT+CS +  G+FTCLTGDCG G L C+G+G  PPATLAEFT+  + G DFYD
Sbjct: 69  SWGGRFWGRTQCSTDTDGKFTCLTGDCGSGTLECSGSGATPPATLAEFTLDGSNGLDFYD 128

Query: 131 VSLVDGFNIPTTIVAQGGTG-PCRSSNCRNDVNRVCPGELQVRS----GNEVIGCKSACF 190
           VSLVDG+N+P  +  QGG+G  C S+ C  D+N  CP EL+V S    G + +GCKSAC 
Sbjct: 129 VSLVDGYNVPMLVAPQGGSGLNCSSTGCVVDLNGSCPSELKVTSLDGRGKQSMGCKSACE 188

Query: 191 AFNQPQYCCTGAFNDPNKCRPTNYSMIFENQCPDAYSYAYDDKNSTFTCNNRPNYVITFC 242
           AF  P+YCC+GA   P+ C+P++YS++F+  CP AYSYAYDD++STFTC   PNYVITFC
Sbjct: 189 AFRTPEYCCSGAHGTPDTCKPSSYSLMFKTACPRAYSYAYDDQSSTFTCAESPNYVITFC 247

[Close]

BLAST of CmoCh14G002310 vs. TAIR 10
Match: AT1G19320.1 (Pathogenesis-related thaumatin superfamily protein )

HSP 1 Score: 253.8 bits (647), Expect = 1.4e-67
Identity = 127/241 (52.70%), Postives = 156/241 (64.73%), Query Frame = 0


Query: 6   VLVATFLFFVLRFGAEAATITVRNNCPRTIWPATLTSGPGQPQLSTTGFELAPGASRSFN 65
           +L  +F+           T T+ N+C  TIWP  LT+     QL   GF LA G+S +F 
Sbjct: 9   LLFISFIIATCTISVSGTTFTLTNHCGSTIWPGILTANGA--QLGDGGFALASGSSVTFT 68

Query: 66  VPAPWTGRVWARTRCS-NNGGRFTCLTGDCGRGLSCNGAGGVPPATLAEFTVAPNGG--- 125
           V   W+GR WART C+ +  G   C TGDCG  L C GAGG PPATLAEFT+  +G    
Sbjct: 69  VSPGWSGRFWARTYCNFDASGSGKCGTGDCGSKLKCAGAGGAPPATLAEFTIGSSGKKNA 128

Query: 126 -QDFYDVSLVDGFNIPTTIVAQGGTGPCRSSNCRNDVNRVCPGELQVRSGNEVIGCKSAC 185
            QDFYDVSLVDG+N+   I  QGG+G C+++ C +DVN +CP ELQV   + V  CKSAC
Sbjct: 129 VQDFYDVSLVDGYNVQMKITPQGGSGDCKTAGCVSDVNAICPKELQVTGPSGVAACKSAC 188

Query: 186 FAFNQPQYCCTGAFNDPNKCRPTNYSMIFENQCPDAYSYAYDDKNSTFTCNNRPNYVITF 242
            AFN+P+YCCTGA++ P  C PTNYS IF+  CP AYSYAYDD +STFTC N  NY I+F
Sbjct: 189 EAFNKPEYCCTGAYSTPATCPPTNYSKIFKQACPSAYSYAYDDASSTFTCTN-ANYEISF 246

The following BLAST results are available for this feature:

BLAST of CmoCh14G002310 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FSG7	3.2e-82	61.89	Thaumatin-like protein 1a OS=Malus domestica OX=3750 GN=TL1 PE=1 SV=1	[more]
P83332	8.0e-81	60.41	Thaumatin-like protein 1 OS=Prunus persica OX=3760 PE=2 SV=1	[more]
O80327	8.9e-80	58.20	Thaumatin-like protein 1 OS=Pyrus pyrifolia OX=3767 GN=TL1 PE=1 SV=1	[more]
Q9SMH2	7.5e-79	58.85	Thaumatin-like protein 1 OS=Castanea sativa OX=21020 GN=TL1 PE=2 SV=1	[more]
P50694	8.3e-78	58.37	Glucan endo-1,3-beta-glucosidase OS=Prunus avium OX=42229 PE=1 SV=1	[more]

BLAST of CmoCh14G002310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FAR1	7.6e-143	100.00	thaumatin-like protein 1b OS=Cucurbita moschata OX=3662 GN=LOC111442363 PE=3 SV=...	[more]
A0A6J1J147	8.2e-137	95.04	thaumatin-like protein 1b OS=Cucurbita maxima OX=3661 GN=LOC111481738 PE=3 SV=1	[more]
A0A1S3B6E5	3.4e-127	88.02	thaumatin-like protein 1b OS=Cucumis melo OX=3656 GN=LOC103486525 PE=3 SV=1	[more]
A0A5D3DNI8	4.4e-122	91.07	Thaumatin-like protein 1b OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A0A0LDS2	1.5e-119	82.23	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G743950 PE=3 SV=1	[more]

BLAST of CmoCh14G002310 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G75040.1	3.2e-69	55.56	pathogenesis-related gene 5	[more]
AT1G20030.2	5.5e-69	53.06	Pathogenesis-related thaumatin superfamily protein	[more]
AT1G20030.1	9.4e-69	56.00	Pathogenesis-related thaumatin superfamily protein	[more]
AT1G75800.1	1.2e-68	52.92	Pathogenesis-related thaumatin superfamily protein	[more]
AT1G19320.1	1.4e-67	52.70	Pathogenesis-related thaumatin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001938	Thaumatin family	PRINTS	PR00347	THAUMATIN	coord: 73..84 score: 55.47 coord: 24..36 score: 50.96 coord: 123..139 score: 58.82 coord: 85..114 score: 39.58 coord: 232..241 score: 45.94
IPR001938	Thaumatin family	SMART	SM00205	tha2	coord: 25..242 e-value: 2.0E-113 score: 392.8
IPR001938	Thaumatin family	PIRSF	PIRSF002703	PR5	coord: 1..242 e-value: 1.9E-96 score: 321.9
IPR001938	Thaumatin family	PFAM	PF00314	Thaumatin	coord: 29..241 e-value: 2.3E-82 score: 275.8
IPR001938	Thaumatin family	PANTHER	PTHR31048	OS03G0233200 PROTEIN	coord: 6..241
IPR001938	Thaumatin family	PROSITE	PS51367	THAUMATIN_2	coord: 22..242 score: 49.009743
IPR037176	Osmotin/thaumatin-like superfamily	GENE3D	2.60.110.10	Thaumatin	coord: 23..241 e-value: 1.2E-91 score: 308.6
IPR037176	Osmotin/thaumatin-like superfamily	SUPERFAMILY	49870	Osmotin, thaumatin-like protein	coord: 23..241
None	No IPR available	PANTHER	PTHR31048:SF132	PRU PROTEIN, PUTATIVE-RELATED	coord: 6..241
None	No IPR available	CDD	cd09218	TLP-PA	coord: 24..241 e-value: 3.55599E-121 score: 341.913
IPR017949	Thaumatin, conserved site	PROSITE	PS00316	THAUMATIN_1	coord: 85..100

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh14G002310.1	CmoCh14G002310.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006952	defense response
cellular_component	GO:0016020	membrane