CmoCh14G001950 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh14G001950
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	t-SNARE coiled-coil homology domain-containing protein
Location	Cmo_Chr14: 879672 .. 881721 (+)
RNA-Seq Expression	CmoCh14G001950
Synteny	CmoCh14G001950

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTTATTTGTTTGTTTGTTTTGTGAGAATATAGTCGTAATTTTATCATAAATTTAAAGCTTTTAAACTGAAAGTTTGCCTCGGTGAGTAGAACAATCAGCGGGAATTTTGTTCAATCAGCGGCGGTACTGGCACTGGCGCACAACTTTTGTAGATATTCGGAACCGCGTTCACCGTTGAAGCTCACCGGAAACCCTATCGAAGCACGGAGGCGAATAATCGAAGATGAGTGTGATCGACCTTTTGACCAGAGTAGACGCGATCTGCCAGAAGTACGACAAATATGATGTAGAGAAGCAGAGAGATCTCAATGTCTCTGGTGACGATGCTTTCGCTCGACTCTATGACACCGTCGAAGCCGACATTGAAGCCGCTCTCCAGGTTTGACACTGATCCCTCAGTCAATTTCTCAGTTCCTACTCGTTCTGTTGCTGGATAGGGAAATGAAGGTTATCATATTGGTTGCTTGTTGCTTTTCTGATCTAGATTTAATTCAGTGGTTGAATCGTCATTTTTAGTGATTCGTAGATGATTTTGCATTTTACTTTGTCGGCGTGGAGGATTGGATTCTATTTTAGGAGCTATTTTGTTGTGTAGAAAGCGGAGGATGCTTCCAGAGAGAAGAATAGGGCATCGGTTGTGGCGTTGAATGCGGAGATTCGTCATACCAAGGCTCGATTACTAGAGGAGATCCCCAAGTTGCAGAGATTAGCTGTAAAGAGGGTTTGTATTCACTGTCTTCACTGATTTTGTTTGAAATTTCACTTTCATTGCTCAAATTCCAGCTTAACCCTGGATGTTTCCTATGAATTGATGAGAGTATTGTGATGAATCGATTAGTTTCCTAAATTCATTCTGCATTTAGGATGGTTTTGGAATTTTTATACTCTTGTTGAAGTTGAGCGACTGGATTTGAATTGTGTTGCTTCTTCCTATATGTTGCATCGGATGGTCACATAATCTATTTACAGGTTAAAGGACTATCAACTGAAGATCTTACCACTAGAAATGATTTGGTGCTTGCATTGCCGGATAGGATTCAAGCTATACCAGATGGAACTACTTCTTCCTCAAAGAAGAATGGGGGTTGGAACTCCTCAACTTCACGTGCTGAAATCAAATTTGACTCGGGTGATGCTTTAAATCTAGCTGAATTTCGATCAACCATTGTTGTGAAAATTTCTTTTTACTTTTAGTTGCGAGTACCTTGCATTAATCGTATTTTTGACCTGCACATTTGAATTGATAAAAGATGGGCGATTTGATAATGAGTACTTCCAACACACTGAGGAGTCGAGTCAATTCAGACAAGAGTATGAAATGCGGAAAATGAAGCAGGTAAACTATATGTATAGTGTAGTCTCTTTATTCAAGAACGAAGGCTGCATGCTTACTGGTCAATGGCTGTGGTTTAAACCCCTTGTTTTGCGCACATGCAGGATCAAGGATTAGACATGATATCAGAGGGGTTGGATACTCTGAAGAACATGGCGCATGATATGAATGAGGTTATTTATCTTCTATGCCCCGTTTTTTTTTTCATTATCAGTATATTAGTTGATAGTGACTGTCGCATGTTATTTGCAGGAAATAGACAGGCAAGTTCCTTTGATGGACGAGATTGACACTAAGGTATTTGTATCTTTATTTATTCATACATATATGTATATATGTACTTGCAGTCTCGATATTCATGTTTATAATCATCACCAAAATTACCTTTTGAATCATGTCAGGTGGACAAGGCTGCATCTGACCTTAAGAACACCAACGTTAGATTAAGGGACACAGTTAACCAGGTTTTGCTTTGTTCCTCTAATCTTCATTATTTAACCTTTGTTGTCGGTTCCTGAAGTGTATATCCCTGTGCACATATGTGCTTATCCTTGTGCATGCACAATACCTTGATTTATATGTATATTTGTAGGACGTTTGTATGTGTATCTAATGTGGGTTTTATTTGCTACAGCTAAGGTCCAGCAGAAATTTCTGCATTGATATCATTTTGTTGTGTATAATCTTGGGTATTGCTGCCTATTTATACAAGTAA

mRNA sequence

GTTTTATTTGTTTGTTTGTTTTGTGAGAATATAGTCGTAATTTTATCATAAATTTAAAGCTTTTAAACTGAAAGTTTGCCTCGGTGAGTAGAACAATCAGCGGGAATTTTGTTCAATCAGCGGCGGTACTGGCACTGGCGCACAACTTTTGTAGATATTCGGAACCGCGTTCACCGTTGAAGCTCACCGGAAACCCTATCGAAGCACGGAGGCGAATAATCGAAGATGAGTGTGATCGACCTTTTGACCAGAGTAGACGCGATCTGCCAGAAGTACGACAAATATGATGTAGAGAAGCAGAGAGATCTCAATGTCTCTGGTGACGATGCTTTCGCTCGACTCTATGACACCGTCGAAGCCGACATTGAAGCCGCTCTCCAGAAAGCGGAGGATGCTTCCAGAGAGAAGAATAGGGCATCGGTTGTGGCGTTGAATGCGGAGATTCGTCATACCAAGGCTCGATTACTAGAGGAGATCCCCAAGTTGCAGAGATTAGCTGTAAAGAGGGTTAAAGGACTATCAACTGAAGATCTTACCACTAGAAATGATTTGGTGCTTGCATTGCCGGATAGGATTCAAGCTATACCAGATGGAACTACTTCTTCCTCAAAGAAGAATGGGGGTTGGAACTCCTCAACTTCACGTGCTGAAATCAAATTTGACTCGGATGGGCGATTTGATAATGAGTACTTCCAACACACTGAGGAGTCGAGTCAATTCAGACAAGAGTATGAAATGCGGAAAATGAAGCAGGATCAAGGATTAGACATGATATCAGAGGGGTTGGATACTCTGAAGAACATGGCGCATGATATGAATGAGGAAATAGACAGGCAAGTTCCTTTGATGGACGAGATTGACACTAAGGTGGACAAGGCTGCATCTGACCTTAAGAACACCAACGTTAGATTAAGGGACACAGTTAACCAGCTAAGGTCCAGCAGAAATTTCTGCATTGATATCATTTTGTTGTGTATAATCTTGGGTATTGCTGCCTATTTATACAAGTAA

Coding sequence (CDS)

ATGAGTGTGATCGACCTTTTGACCAGAGTAGACGCGATCTGCCAGAAGTACGACAAATATGATGTAGAGAAGCAGAGAGATCTCAATGTCTCTGGTGACGATGCTTTCGCTCGACTCTATGACACCGTCGAAGCCGACATTGAAGCCGCTCTCCAGAAAGCGGAGGATGCTTCCAGAGAGAAGAATAGGGCATCGGTTGTGGCGTTGAATGCGGAGATTCGTCATACCAAGGCTCGATTACTAGAGGAGATCCCCAAGTTGCAGAGATTAGCTGTAAAGAGGGTTAAAGGACTATCAACTGAAGATCTTACCACTAGAAATGATTTGGTGCTTGCATTGCCGGATAGGATTCAAGCTATACCAGATGGAACTACTTCTTCCTCAAAGAAGAATGGGGGTTGGAACTCCTCAACTTCACGTGCTGAAATCAAATTTGACTCGGATGGGCGATTTGATAATGAGTACTTCCAACACACTGAGGAGTCGAGTCAATTCAGACAAGAGTATGAAATGCGGAAAATGAAGCAGGATCAAGGATTAGACATGATATCAGAGGGGTTGGATACTCTGAAGAACATGGCGCATGATATGAATGAGGAAATAGACAGGCAAGTTCCTTTGATGGACGAGATTGACACTAAGGTGGACAAGGCTGCATCTGACCTTAAGAACACCAACGTTAGATTAAGGGACACAGTTAACCAGCTAAGGTCCAGCAGAAATTTCTGCATTGATATCATTTTGTTGTGTATAATCTTGGGTATTGCTGCCTATTTATACAAGTAA

Protein sequence

MSVIDLLTRVDAICQKYDKYDVEKQRDLNVSGDDAFARLYDTVEADIEAALQKAEDASREKNRASVVALNAEIRHTKARLLEEIPKLQRLAVKRVKGLSTEDLTTRNDLVLALPDRIQAIPDGTTSSSKKNGGWNSSTSRAEIKFDSDGRFDNEYFQHTEESSQFRQEYEMRKMKQDQGLDMISEGLDTLKNMAHDMNEEIDRQVPLMDEIDTKVDKAASDLKNTNVRLRDTVNQLRSSRNFCIDIILLCIILGIAAYLYK

Homology

[Close]

BLAST of CmoCh14G001950 vs. ExPASy Swiss-Prot
Match: Q9SF29 (Syntaxin-71 OS=Arabidopsis thaliana OX=3702 GN=SYP71 PE=1 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 3.1e-107
Identity = 202/262 (77.10%), Postives = 231/262 (88.17%), Query Frame = 0


Query: 1   MSVIDLLTRVDAICQKYDKYDVEKQRDLNVSGDDAFARLYDTVEADIEAALQKAEDASRE 60
           M+VID+LTRVD+IC+KYDKYDV+KQR+ N+SGDDAFARLY   E  IE AL+KAE  ++E
Sbjct: 1   MTVIDILTRVDSICKKYDKYDVDKQREANISGDDAFARLYGAFETQIETALEKAELVTKE 60

Query: 61  KNRASVVALNAEIRHTKARLLEEIPKLQRLAVKRVKGLSTEDLTTRNDLVLALPDRIQAI 120
           KNRA+ VA+NAEIR TKARL EE+PKLQRLAVKRVKGL+TE+L  RNDLVLALP RI+AI
Sbjct: 61  KNRAAAVAMNAEIRRTKARLSEEVPKLQRLAVKRVKGLTTEELAARNDLVLALPARIEAI 120

Query: 121 PDGTTSSSKKNGGW--NSSTSRAEIKFDSDGRFDNEYFQHTEESSQFRQEYEMRKMKQDQ 180
           PDGT    K    W  +S+TSR +IKFDSDGRFD++YFQ + ESSQFRQEYEMRK+KQ+Q
Sbjct: 121 PDGTAGGPKSTSAWTPSSTTSRPDIKFDSDGRFDDDYFQESNESSQFRQEYEMRKIKQEQ 180

Query: 181 GLDMISEGLDTLKNMAHDMNEEIDRQVPLMDEIDTKVDKAASDLKNTNVRLRDTVNQLRS 240
           GLDMISEGLD LKNMA DMNEE+DRQVPLMDEIDTKVD+A SDLKNTNVRL+DTVNQLRS
Sbjct: 181 GLDMISEGLDALKNMASDMNEELDRQVPLMDEIDTKVDRATSDLKNTNVRLKDTVNQLRS 240

Query: 241 SRNFCIDIILLCIILGIAAYLY 261
           SRNFCIDI+LLCI+LGIAAYLY
Sbjct: 241 SRNFCIDIVLLCIVLGIAAYLY 262

[Close]

BLAST of CmoCh14G001950 vs. ExPASy Swiss-Prot
Match: Q94KK5 (Syntaxin-73 OS=Arabidopsis thaliana OX=3702 GN=SYP73 PE=2 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 1.0e-89
Identity = 179/263 (68.06%), Postives = 218/263 (82.89%), Query Frame = 0


Query: 1   MSVIDLLTRVDAICQKYDKYDVEKQRDLNVSGDDAFARLYDTVEADIEAALQKAEDASRE 60
           M VIDL+TRVD+IC+KY+KYD+ +QRD NVSGDDAF+RLY  VE  +E  LQK ED S E
Sbjct: 1   MGVIDLITRVDSICKKYEKYDINRQRDANVSGDDAFSRLYSAVEYALETVLQKTEDLSSE 60

Query: 61  KNRASVVALNAEIRHTKARLLEEIPKLQRLAVKRVKGLSTEDLTTRNDLVLALPDRIQAI 120
            N+A  VA+NAEIR TKARLLE IPKLQRL++K+VKGLS E+L  RNDLVL+L D+I+AI
Sbjct: 61  TNKAKAVAMNAEIRRTKARLLEGIPKLQRLSLKKVKGLSKEELDARNDLVLSLRDKIEAI 120

Query: 121 PDGTTSSSKKNGGWNSSTSRAEIKFD---SDGRFDNEYFQHTEESSQFRQEYEMRKMKQD 180
           P+   SS+   GGW +STS + I+FD   SD R  +EYFQ T ES QF+QEYEM+++KQ 
Sbjct: 121 PE---SSAPVVGGWEASTSYSNIRFDTNVSDDRIGSEYFQPTGESDQFKQEYEMKRIKQA 180

Query: 181 QGLDMISEGLDTLKNMAHDMNEEIDRQVPLMDEIDTKVDKAASDLKNTNVRLRDTVNQLR 240
           + LD I+EGLDTLKNMA D+NEE+DRQ PLMDEIDTK+DKAA+DLK+TNVRL+DTV +LR
Sbjct: 181 R-LDYIAEGLDTLKNMAQDINEELDRQEPLMDEIDTKIDKAATDLKSTNVRLKDTVTKLR 240

Query: 241 SSRNFCIDIILLCIILGIAAYLY 261
           SSRNFCIDIILLCI+LGIAA++Y
Sbjct: 241 SSRNFCIDIILLCILLGIAAFIY 259

[Close]

BLAST of CmoCh14G001950 vs. ExPASy Swiss-Prot
Match: Q94KK6 (Syntaxin-72 OS=Arabidopsis thaliana OX=3702 GN=SYP72 PE=2 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 5.8e-85
Identity = 166/263 (63.12%), Postives = 215/263 (81.75%), Query Frame = 0


Query: 1   MSVIDLLTRVDAICQKYDKYDVEKQRDLNVSGDDAFARLYDTVEADIEAALQKAEDASRE 60
           M VID++ RVD IC+KYDKYD++K R++  SGDDAF+RL+ ++++DIEA L+KAE AS E
Sbjct: 1   MPVIDIIFRVDEICKKYDKYDIDKHREIGASGDDAFSRLFTSIDSDIEAVLRKAELASTE 60

Query: 61  KNRASVVALNAEIRHTKARLLEEIPKLQRLAVKRVKGLSTEDLTTRNDLVLALPDRIQAI 120
           KNRA+ VA+NAE+R TKARL E++ KLQ+LAVK++KGL+ E+  +R DLV+AL DR+QAI
Sbjct: 61  KNRAAAVAMNAEVRRTKARLAEDVVKLQKLAVKKIKGLTREERESRCDLVIALADRLQAI 120

Query: 121 PDGTTSSSKK-NGGW-NSSTSRAEIKFD-SDGRFDNEYFQHTEESSQFRQEYEMRKMKQD 180
           PDG    +K+ N  W  +S     IKFD S+   D+ +FQ +EESSQFRQEYEMR+ KQD
Sbjct: 121 PDGNEHGAKQANSDWGGASAPNKNIKFDMSEEDMDDGFFQQSEESSQFRQEYEMRRKKQD 180

Query: 181 QGLDMISEGLDTLKNMAHDMNEEIDRQVPLMDEIDTKVDKAASDLKNTNVRLRDTVNQLR 240
           +GLD+ISEGLD LKN+A DMNEE+D+QVPLM+E++TKVD A SDLKNTNVRL+  + Q+R
Sbjct: 181 EGLDIISEGLDALKNLARDMNEELDKQVPLMEEMETKVDGATSDLKNTNVRLKKQLVQMR 240

Query: 241 SSRNFCIDIILLCIILGIAAYLY 261
           SSRNFCIDIILLC+ILGI +Y+Y
Sbjct: 241 SSRNFCIDIILLCVILGIVSYIY 263

[Close]

BLAST of CmoCh14G001950 vs. ExPASy Swiss-Prot
Match: Q54IX6 (Probable syntaxin-8B OS=Dictyostelium discoideum OX=44689 GN=syn8B PE=3 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 2.0e-05
Identity = 59/236 (25.00%), Postives = 119/236 (50.42%), Query Frame = 0


Query: 34  DAFARLYDTVEADIEAALQKAEDASREKNRASVVALN--AEIRHTKARLLEEIPKLQ-RL 93
           D   +L +++ ADI+      E + +++N   +V  N  A++R+    +  EI +LQ  L
Sbjct: 10  DNIVKLINSLTADIK------EYSIQQRNNPGIVQKNTPAKLRNGLVHITNEILRLQDSL 69

Query: 94  AVKRVKGLSTEDLTTRNDLVLALPDRIQAIPDGTTSSSKKNGGWNSSTSRAEIKFDSDG- 153
                + +  ++L  R + V +L      I      +S  +   N+++ + E+  +++G 
Sbjct: 70  TYGNNRNIQEKELLRRKNKVESL------ISMKNQLNSTLDAAINNTSQKNELMGNNNGV 129

Query: 154 --RFDNEYF---QHTEESSQF-------RQEYEMRKMKQDQGLDMISEGLDTLKNMAHDM 213
              + N  F   + TE + QF        Q++ MR  +QD+ LD++S+ +   KNMAH M
Sbjct: 130 GIGYSNRQFGKPKETEATKQFDNQQLFTNQQHIMR--EQDESLDLLSQSIMRQKNMAHAM 189

Query: 214 NEEIDRQVPLMDEIDTKVDKAASDLKNTNVRLRDTVNQLRSSRNFCIDIILLCIIL 254
           + E+D+   ++D+++   D  +  L+N N R+ +T+ Q   S    + I++L I++
Sbjct: 190 SNELDQHNEMLDDVEIGTDAVSMRLRNANRRM-ETIKQNAGSTCMIVCIVILIILI 230

[Close]

BLAST of CmoCh14G001950 vs. ExPASy TrEMBL
Match: A0A6J1FB72 (syntaxin-71-like OS=Cucurbita moschata OX=3662 GN=LOC111442467 PE=3 SV=1)

HSP 1 Score: 490.3 bits (1261), Expect = 4.8e-135
Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 1   MSVIDLLTRVDAICQKYDKYDVEKQRDLNVSGDDAFARLYDTVEADIEAALQKAEDASRE 60
           MSVIDLLTRVDAICQKYDKYDVEKQRDLNVSGDDAFARLYDTVEADIEAALQKAEDASRE
Sbjct: 1   MSVIDLLTRVDAICQKYDKYDVEKQRDLNVSGDDAFARLYDTVEADIEAALQKAEDASRE 60

Query: 61  KNRASVVALNAEIRHTKARLLEEIPKLQRLAVKRVKGLSTEDLTTRNDLVLALPDRIQAI 120
           KNRASVVALNAEIRHTKARLLEEIPKLQRLAVKRVKGLSTEDLTTRNDLVLALPDRIQAI
Sbjct: 61  KNRASVVALNAEIRHTKARLLEEIPKLQRLAVKRVKGLSTEDLTTRNDLVLALPDRIQAI 120

Query: 121 PDGTTSSSKKNGGWNSSTSRAEIKFDSDGRFDNEYFQHTEESSQFRQEYEMRKMKQDQGL 180
           PDGTTSSSKKNGGWNSSTSRAEIKFDSDGRFDNEYFQHTEESSQFRQEYEMRKMKQDQGL
Sbjct: 121 PDGTTSSSKKNGGWNSSTSRAEIKFDSDGRFDNEYFQHTEESSQFRQEYEMRKMKQDQGL 180

Query: 181 DMISEGLDTLKNMAHDMNEEIDRQVPLMDEIDTKVDKAASDLKNTNVRLRDTVNQLRSSR 240
           DMISEGLDTLKNMAHDMNEEIDRQVPLMDEIDTKVDKAASDLKNTNVRLRDTVNQLRSSR
Sbjct: 181 DMISEGLDTLKNMAHDMNEEIDRQVPLMDEIDTKVDKAASDLKNTNVRLRDTVNQLRSSR 240

Query: 241 NFCIDIILLCIILGIAAYLY 261
           NFCIDIILLCIILGIAAYLY
Sbjct: 241 NFCIDIILLCIILGIAAYLY 260

[Close]

BLAST of CmoCh14G001950 vs. ExPASy TrEMBL
Match: A0A6J1J7V9 (syntaxin-71 OS=Cucurbita maxima OX=3661 GN=LOC111482157 PE=3 SV=1)

HSP 1 Score: 481.1 bits (1237), Expect = 2.9e-132
Identity = 255/260 (98.08%), Postives = 257/260 (98.85%), Query Frame = 0


Query: 1   MSVIDLLTRVDAICQKYDKYDVEKQRDLNVSGDDAFARLYDTVEADIEAALQKAEDASRE 60
           MSVIDLLTRVDAICQKYDKYDVEKQRDLNVSGDDAFARL+ TVEADIEAALQKAEDASRE
Sbjct: 1   MSVIDLLTRVDAICQKYDKYDVEKQRDLNVSGDDAFARLFATVEADIEAALQKAEDASRE 60

Query: 61  KNRASVVALNAEIRHTKARLLEEIPKLQRLAVKRVKGLSTEDLTTRNDLVLALPDRIQAI 120
           KNRASVVALNAEIRHTKARLLEE+PKLQRLAVKRVKGLSTEDLTTRNDLVLALPDRIQAI
Sbjct: 61  KNRASVVALNAEIRHTKARLLEEVPKLQRLAVKRVKGLSTEDLTTRNDLVLALPDRIQAI 120

Query: 121 PDGTTSSSKKNGGWNSSTSRAEIKFDSDGRFDNEYFQHTEESSQFRQEYEMRKMKQDQGL 180
           PDGT SSSKKNGGW SSTSRAEIKFDSDGRFDNEYFQHTEESSQFRQEYEMRKMKQDQGL
Sbjct: 121 PDGTASSSKKNGGWTSSTSRAEIKFDSDGRFDNEYFQHTEESSQFRQEYEMRKMKQDQGL 180

Query: 181 DMISEGLDTLKNMAHDMNEEIDRQVPLMDEIDTKVDKAASDLKNTNVRLRDTVNQLRSSR 240
           DMISEGLDTLKNMAHDMNEEIDRQVPLMDEIDTKVDKAASDLKNTNVRLRDTVNQLRSSR
Sbjct: 181 DMISEGLDTLKNMAHDMNEEIDRQVPLMDEIDTKVDKAASDLKNTNVRLRDTVNQLRSSR 240

Query: 241 NFCIDIILLCIILGIAAYLY 261
           NFCIDIILLCIILGIAAYLY
Sbjct: 241 NFCIDIILLCIILGIAAYLY 260

[Close]

BLAST of CmoCh14G001950 vs. ExPASy TrEMBL
Match: A0A5A7TS26 (Syntaxin-71 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G002460 PE=3 SV=1)

HSP 1 Score: 467.6 bits (1202), Expect = 3.4e-128
Identity = 245/261 (93.87%), Postives = 254/261 (97.32%), Query Frame = 0


Query: 1   MSVIDLLTRVDAICQKYDKYDVEKQRDLNVSGDDAFARLYDTVEADIEAALQKAEDASRE 60
           MSVIDLLTRVDAICQKYDKYD+EKQRDLNVSGDDAFARLY TVEADIEAALQKAEDAS+E
Sbjct: 1   MSVIDLLTRVDAICQKYDKYDIEKQRDLNVSGDDAFARLYATVEADIEAALQKAEDASKE 60

Query: 61  KNRASVVALNAEIRHTKARLLEEIPKLQRLAVKRVKGLSTEDLTTRNDLVLALPDRIQAI 120
           KNRASVVALNAEIR TKARLLEE+PKLQRLAVKRVKGLSTEDLTTRNDLVLALPDRIQAI
Sbjct: 61  KNRASVVALNAEIRRTKARLLEEVPKLQRLAVKRVKGLSTEDLTTRNDLVLALPDRIQAI 120

Query: 121 PDGTTSSSKKNGGWNSSTSRAEIKFDSDGRFDNEYFQHTEESSQFRQEYEMRKMKQDQGL 180
           PDGT +++K NGGW SS SR EIKFDSDGRFD+EYFQHTE+SSQFRQEYEMRKMKQDQGL
Sbjct: 121 PDGTVTTTKNNGGWTSSASRTEIKFDSDGRFDDEYFQHTEQSSQFRQEYEMRKMKQDQGL 180

Query: 181 DMISEGLDTLKNMAHDMNEEIDRQVPLMDEIDTKVDKAASDLKNTNVRLRDTVNQLRSSR 240
           DMISEGLDTLKNMAHDMNEEIDRQVPLMDEIDTKVDKAASDLKNTNVRL+DTVNQLRSSR
Sbjct: 181 DMISEGLDTLKNMAHDMNEEIDRQVPLMDEIDTKVDKAASDLKNTNVRLKDTVNQLRSSR 240

Query: 241 NFCIDIILLCIILGIAAYLYK 262
           NFCIDIILLCIILGIAAYLYK
Sbjct: 241 NFCIDIILLCIILGIAAYLYK 261

[Close]

BLAST of CmoCh14G001950 vs. ExPASy TrEMBL
Match: A0A1S3CFA3 (syntaxin-71-like OS=Cucumis melo OX=3656 GN=LOC103500265 PE=3 SV=1)

HSP 1 Score: 466.5 bits (1199), Expect = 7.5e-128
Identity = 246/260 (94.62%), Postives = 253/260 (97.31%), Query Frame = 0


Query: 1   MSVIDLLTRVDAICQKYDKYDVEKQRDLNVSGDDAFARLYDTVEADIEAALQKAEDASRE 60
           MSVIDLLTRVDAICQKYDKYDVEKQRDLNVSGDDAFARLY TVEADIEAALQKAEDAS+E
Sbjct: 1   MSVIDLLTRVDAICQKYDKYDVEKQRDLNVSGDDAFARLYATVEADIEAALQKAEDASKE 60

Query: 61  KNRASVVALNAEIRHTKARLLEEIPKLQRLAVKRVKGLSTEDLTTRNDLVLALPDRIQAI 120
           KNRASVVALNAEIR TKARLLE++PKLQRLAVKRVKGLSTEDLTTRNDLVLALPDRIQAI
Sbjct: 61  KNRASVVALNAEIRRTKARLLEDVPKLQRLAVKRVKGLSTEDLTTRNDLVLALPDRIQAI 120

Query: 121 PDGTTSSSKKNGGWNSSTSRAEIKFDSDGRFDNEYFQHTEESSQFRQEYEMRKMKQDQGL 180
           PDGT +++K NGGW SS SR EIKFDSDGRFD+EYFQHTEESSQFRQEYEMRKMKQDQGL
Sbjct: 121 PDGTVTTTKNNGGWTSSASRTEIKFDSDGRFDDEYFQHTEESSQFRQEYEMRKMKQDQGL 180

Query: 181 DMISEGLDTLKNMAHDMNEEIDRQVPLMDEIDTKVDKAASDLKNTNVRLRDTVNQLRSSR 240
           DMISEGLDTLKNMAHDMNEEIDRQVPLMDEIDTKVDKAASDLKNTNVRLRDTVNQLRSSR
Sbjct: 181 DMISEGLDTLKNMAHDMNEEIDRQVPLMDEIDTKVDKAASDLKNTNVRLRDTVNQLRSSR 240

Query: 241 NFCIDIILLCIILGIAAYLY 261
           NFCIDIILLCIILGIAAYLY
Sbjct: 241 NFCIDIILLCIILGIAAYLY 260

[Close]

BLAST of CmoCh14G001950 vs. ExPASy TrEMBL
Match: A0A6J1FSW5 (syntaxin-71-like OS=Cucurbita moschata OX=3662 GN=LOC111446575 PE=3 SV=1)

HSP 1 Score: 465.7 bits (1197), Expect = 1.3e-127
Identity = 247/260 (95.00%), Postives = 253/260 (97.31%), Query Frame = 0


Query: 1   MSVIDLLTRVDAICQKYDKYDVEKQRDLNVSGDDAFARLYDTVEADIEAALQKAEDASRE 60
           MSVIDLLTRVDAICQKYDKYDVEKQRDLNVSGDDAFARLY TVEADIEAALQKAEDASRE
Sbjct: 1   MSVIDLLTRVDAICQKYDKYDVEKQRDLNVSGDDAFARLYATVEADIEAALQKAEDASRE 60

Query: 61  KNRASVVALNAEIRHTKARLLEEIPKLQRLAVKRVKGLSTEDLTTRNDLVLALPDRIQAI 120
           KNRASVVALNAEIR TKARLLEEIPKLQRLA+KRVKGLSTEDLTTRNDLVLALP+RIQAI
Sbjct: 61  KNRASVVALNAEIRRTKARLLEEIPKLQRLALKRVKGLSTEDLTTRNDLVLALPERIQAI 120

Query: 121 PDGTTSSSKKNGGWNSSTSRAEIKFDSDGRFDNEYFQHTEESSQFRQEYEMRKMKQDQGL 180
           PDGT +S+KKNGGW SS SR EIKFDSDGRFD+EYFQHTEESSQFRQEYEMRKMKQDQGL
Sbjct: 121 PDGTATSTKKNGGWTSSASRTEIKFDSDGRFDDEYFQHTEESSQFRQEYEMRKMKQDQGL 180

Query: 181 DMISEGLDTLKNMAHDMNEEIDRQVPLMDEIDTKVDKAASDLKNTNVRLRDTVNQLRSSR 240
           DMISEGLDTLKNMAHDMNEEIDRQVPLMDEIDTKVDKAASDLKNTNVRL+ TVNQLRSSR
Sbjct: 181 DMISEGLDTLKNMAHDMNEEIDRQVPLMDEIDTKVDKAASDLKNTNVRLKHTVNQLRSSR 240

Query: 241 NFCIDIILLCIILGIAAYLY 261
           NFCIDIILLCIILGIAAYLY
Sbjct: 241 NFCIDIILLCIILGIAAYLY 260

[Close]

BLAST of CmoCh14G001950 vs. TAIR 10
Match: AT3G09740.1 (syntaxin of plants 71 )

HSP 1 Score: 389.4 bits (999), Expect = 2.2e-108
Identity = 202/262 (77.10%), Postives = 231/262 (88.17%), Query Frame = 0


Query: 1   MSVIDLLTRVDAICQKYDKYDVEKQRDLNVSGDDAFARLYDTVEADIEAALQKAEDASRE 60
           M+VID+LTRVD+IC+KYDKYDV+KQR+ N+SGDDAFARLY   E  IE AL+KAE  ++E
Sbjct: 1   MTVIDILTRVDSICKKYDKYDVDKQREANISGDDAFARLYGAFETQIETALEKAELVTKE 60

Query: 61  KNRASVVALNAEIRHTKARLLEEIPKLQRLAVKRVKGLSTEDLTTRNDLVLALPDRIQAI 120
           KNRA+ VA+NAEIR TKARL EE+PKLQRLAVKRVKGL+TE+L  RNDLVLALP RI+AI
Sbjct: 61  KNRAAAVAMNAEIRRTKARLSEEVPKLQRLAVKRVKGLTTEELAARNDLVLALPARIEAI 120

Query: 121 PDGTTSSSKKNGGW--NSSTSRAEIKFDSDGRFDNEYFQHTEESSQFRQEYEMRKMKQDQ 180
           PDGT    K    W  +S+TSR +IKFDSDGRFD++YFQ + ESSQFRQEYEMRK+KQ+Q
Sbjct: 121 PDGTAGGPKSTSAWTPSSTTSRPDIKFDSDGRFDDDYFQESNESSQFRQEYEMRKIKQEQ 180

Query: 181 GLDMISEGLDTLKNMAHDMNEEIDRQVPLMDEIDTKVDKAASDLKNTNVRLRDTVNQLRS 240
           GLDMISEGLD LKNMA DMNEE+DRQVPLMDEIDTKVD+A SDLKNTNVRL+DTVNQLRS
Sbjct: 181 GLDMISEGLDALKNMASDMNEELDRQVPLMDEIDTKVDRATSDLKNTNVRLKDTVNQLRS 240

Query: 241 SRNFCIDIILLCIILGIAAYLY 261
           SRNFCIDI+LLCI+LGIAAYLY
Sbjct: 241 SRNFCIDIVLLCIVLGIAAYLY 262

[Close]

BLAST of CmoCh14G001950 vs. TAIR 10
Match: AT3G61450.2 (syntaxin of plants 73 )

HSP 1 Score: 342.8 bits (878), Expect = 2.4e-94
Identity = 182/263 (69.20%), Postives = 220/263 (83.65%), Query Frame = 0


Query: 1   MSVIDLLTRVDAICQKYDKYDVEKQRDLNVSGDDAFARLYDTVEADIEAALQKAEDASRE 60
           M VIDL+TRVD+IC+KY+KYD+ +QRD NVSGDDAF+RLY  VE  +E  LQK ED S E
Sbjct: 1   MGVIDLITRVDSICKKYEKYDINRQRDANVSGDDAFSRLYSAVEYALETVLQKTEDLSSE 60

Query: 61  KNRASVVALNAEIRHTKARLLEEIPKLQRLAVKRVKGLSTEDLTTRNDLVLALPDRIQAI 120
            N+A  VA+NAEIR TKARLLE IPKLQRL++K+VKGLS E+L  RNDLVL+L D+I+AI
Sbjct: 61  TNKAKAVAMNAEIRRTKARLLEGIPKLQRLSLKKVKGLSKEELDARNDLVLSLRDKIEAI 120

Query: 121 PDGTTSSSKKNGGWNSSTSRAEIKFD---SDGRFDNEYFQHTEESSQFRQEYEMRKMKQD 180
           P+   SS+   GGW +STS + I+FD   SD R  +EYFQ T ES QF+QEYEM+++KQD
Sbjct: 121 PE---SSAPVVGGWEASTSYSNIRFDTNVSDDRIGSEYFQPTGESDQFKQEYEMKRIKQD 180

Query: 181 QGLDMISEGLDTLKNMAHDMNEEIDRQVPLMDEIDTKVDKAASDLKNTNVRLRDTVNQLR 240
           QGLD I+EGLDTLKNMA D+NEE+DRQ PLMDEIDTK+DKAA+DLK+TNVRL+DTV +LR
Sbjct: 181 QGLDYIAEGLDTLKNMAQDINEELDRQEPLMDEIDTKIDKAATDLKSTNVRLKDTVTKLR 240

Query: 241 SSRNFCIDIILLCIILGIAAYLY 261
           SSRNFCIDIILLCI+LGIAA++Y
Sbjct: 241 SSRNFCIDIILLCILLGIAAFIY 260

[Close]

BLAST of CmoCh14G001950 vs. TAIR 10
Match: AT3G61450.1 (syntaxin of plants 73 )

HSP 1 Score: 331.3 bits (848), Expect = 7.2e-91
Identity = 179/263 (68.06%), Postives = 218/263 (82.89%), Query Frame = 0


Query: 1   MSVIDLLTRVDAICQKYDKYDVEKQRDLNVSGDDAFARLYDTVEADIEAALQKAEDASRE 60
           M VIDL+TRVD+IC+KY+KYD+ +QRD NVSGDDAF+RLY  VE  +E  LQK ED S E
Sbjct: 1   MGVIDLITRVDSICKKYEKYDINRQRDANVSGDDAFSRLYSAVEYALETVLQKTEDLSSE 60

Query: 61  KNRASVVALNAEIRHTKARLLEEIPKLQRLAVKRVKGLSTEDLTTRNDLVLALPDRIQAI 120
            N+A  VA+NAEIR TKARLLE IPKLQRL++K+VKGLS E+L  RNDLVL+L D+I+AI
Sbjct: 61  TNKAKAVAMNAEIRRTKARLLEGIPKLQRLSLKKVKGLSKEELDARNDLVLSLRDKIEAI 120

Query: 121 PDGTTSSSKKNGGWNSSTSRAEIKFD---SDGRFDNEYFQHTEESSQFRQEYEMRKMKQD 180
           P+   SS+   GGW +STS + I+FD   SD R  +EYFQ T ES QF+QEYEM+++KQ 
Sbjct: 121 PE---SSAPVVGGWEASTSYSNIRFDTNVSDDRIGSEYFQPTGESDQFKQEYEMKRIKQA 180

Query: 181 QGLDMISEGLDTLKNMAHDMNEEIDRQVPLMDEIDTKVDKAASDLKNTNVRLRDTVNQLR 240
           + LD I+EGLDTLKNMA D+NEE+DRQ PLMDEIDTK+DKAA+DLK+TNVRL+DTV +LR
Sbjct: 181 R-LDYIAEGLDTLKNMAQDINEELDRQEPLMDEIDTKIDKAATDLKSTNVRLKDTVTKLR 240

Query: 241 SSRNFCIDIILLCIILGIAAYLY 261
           SSRNFCIDIILLCI+LGIAA++Y
Sbjct: 241 SSRNFCIDIILLCILLGIAAFIY 259

[Close]

BLAST of CmoCh14G001950 vs. TAIR 10
Match: AT3G45280.1 (syntaxin of plants 72 )

HSP 1 Score: 315.5 bits (807), Expect = 4.1e-86
Identity = 166/263 (63.12%), Postives = 215/263 (81.75%), Query Frame = 0


Query: 1   MSVIDLLTRVDAICQKYDKYDVEKQRDLNVSGDDAFARLYDTVEADIEAALQKAEDASRE 60
           M VID++ RVD IC+KYDKYD++K R++  SGDDAF+RL+ ++++DIEA L+KAE AS E
Sbjct: 1   MPVIDIIFRVDEICKKYDKYDIDKHREIGASGDDAFSRLFTSIDSDIEAVLRKAELASTE 60

Query: 61  KNRASVVALNAEIRHTKARLLEEIPKLQRLAVKRVKGLSTEDLTTRNDLVLALPDRIQAI 120
           KNRA+ VA+NAE+R TKARL E++ KLQ+LAVK++KGL+ E+  +R DLV+AL DR+QAI
Sbjct: 61  KNRAAAVAMNAEVRRTKARLAEDVVKLQKLAVKKIKGLTREERESRCDLVIALADRLQAI 120

Query: 121 PDGTTSSSKK-NGGW-NSSTSRAEIKFD-SDGRFDNEYFQHTEESSQFRQEYEMRKMKQD 180
           PDG    +K+ N  W  +S     IKFD S+   D+ +FQ +EESSQFRQEYEMR+ KQD
Sbjct: 121 PDGNEHGAKQANSDWGGASAPNKNIKFDMSEEDMDDGFFQQSEESSQFRQEYEMRRKKQD 180

Query: 181 QGLDMISEGLDTLKNMAHDMNEEIDRQVPLMDEIDTKVDKAASDLKNTNVRLRDTVNQLR 240
           +GLD+ISEGLD LKN+A DMNEE+D+QVPLM+E++TKVD A SDLKNTNVRL+  + Q+R
Sbjct: 181 EGLDIISEGLDALKNLARDMNEELDKQVPLMEEMETKVDGATSDLKNTNVRLKKQLVQMR 240

Query: 241 SSRNFCIDIILLCIILGIAAYLY 261
           SSRNFCIDIILLC+ILGI +Y+Y
Sbjct: 241 SSRNFCIDIILLCVILGIVSYIY 263

[Close]

BLAST of CmoCh14G001950 vs. TAIR 10
Match: AT1G13890.1 (soluble N-ethylmaleimide-sensitive factor adaptor protein 30 )

HSP 1 Score: 42.4 bits (98), Expect = 6.7e-04
Identity = 56/206 (27.18%), Postives = 92/206 (44.66%), Query Frame = 0


Query: 42  TVEADIEAALQKAEDASREKNRASVVALNAEIRHTKARLL-------EEIPKLQRLAVKR 101
           T E   + A+ KAE+ ++  N    +A   +IR   AR L       E+I +   +AV  
Sbjct: 62  TTEELEKYAVYKAEETTKGVNNCLKIA--EDIRSDGARTLEMLHQQGEQINRTHEMAVDM 121

Query: 102 VKGLST-EDLTTRNDLVLALPDRIQAIPDGT----TSSSKKNGGWNSSTSRAEIKFDSDG 161
            K LS  E L      + + P + +   + T    T         N    R ++   + G
Sbjct: 122 DKDLSRGEKLLNNLGGMFSKPWKPKKTKNITGPMITPDKPSKKSENHKEEREKLGLGAKG 181

Query: 162 RFDNEYFQHTEESSQFRQEYEMRKMKQDQGLDMISEGLDTLKNMAHDMNEEIDRQVPLMD 221
           R  ++     ++ +   Q+ E  K KQD GL  +S+ L  LK+MA DM  EID+Q   +D
Sbjct: 182 RSSSQ--PALDQPTNALQKVEQEKAKQDDGLSDLSDILGDLKSMAVDMGSEIDKQNKALD 241

Query: 222 EIDTKVDKAASDLKNTNVRLRDTVNQ 236
            +   VD+  S ++  N R R  +++
Sbjct: 242 HLGDDVDELNSRVQGANQRARHLLSK 263

The following BLAST results are available for this feature:

BLAST of CmoCh14G001950 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SF29	3.1e-107	77.10	Syntaxin-71 OS=Arabidopsis thaliana OX=3702 GN=SYP71 PE=1 SV=1	[more]
Q94KK5	1.0e-89	68.06	Syntaxin-73 OS=Arabidopsis thaliana OX=3702 GN=SYP73 PE=2 SV=1	[more]
Q94KK6	5.8e-85	63.12	Syntaxin-72 OS=Arabidopsis thaliana OX=3702 GN=SYP72 PE=2 SV=1	[more]
Q54IX6	2.0e-05	25.00	Probable syntaxin-8B OS=Dictyostelium discoideum OX=44689 GN=syn8B PE=3 SV=1	[more]

BLAST of CmoCh14G001950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FB72	4.8e-135	100.00	syntaxin-71-like OS=Cucurbita moschata OX=3662 GN=LOC111442467 PE=3 SV=1	[more]
A0A6J1J7V9	2.9e-132	98.08	syntaxin-71 OS=Cucurbita maxima OX=3661 GN=LOC111482157 PE=3 SV=1	[more]
A0A5A7TS26	3.4e-128	93.87	Syntaxin-71 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G002460 P...	[more]
A0A1S3CFA3	7.5e-128	94.62	syntaxin-71-like OS=Cucumis melo OX=3656 GN=LOC103500265 PE=3 SV=1	[more]
A0A6J1FSW5	1.3e-127	95.00	syntaxin-71-like OS=Cucurbita moschata OX=3662 GN=LOC111446575 PE=3 SV=1	[more]

BLAST of CmoCh14G001950 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G09740.1	2.2e-108	77.10	syntaxin of plants 71	[more]
AT3G61450.2	2.4e-94	69.20	syntaxin of plants 73	[more]
AT3G61450.1	7.2e-91	68.06	syntaxin of plants 73	[more]
AT3G45280.1	4.1e-86	63.12	syntaxin of plants 72	[more]
AT1G13890.1	6.7e-04	27.18	soluble N-ethylmaleimide-sensitive factor adaptor protein 30	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 40..67
None	No IPR available	COILS	Coil	Coil	coord: 219..239
None	No IPR available	GENE3D	1.20.5.110		coord: 170..231 e-value: 1.7E-17 score: 65.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 120..139
None	No IPR available	PANTHER	PTHR19957:SF264	SYNTAXIN-73	coord: 1..260
None	No IPR available	PANTHER	PTHR19957	SYNTAXIN	coord: 1..260
None	No IPR available	CDD	cd15841	SNARE_Qc	coord: 175..230 e-value: 3.41833E-15 score: 66.428
None	No IPR available	SUPERFAMILY	58038	SNARE fusion complex	coord: 163..230
IPR000727	Target SNARE coiled-coil homology domain	SMART	SM00397	tSNARE_6	coord: 165..232 e-value: 2.7E-6 score: 36.9
IPR000727	Target SNARE coiled-coil homology domain	PFAM	PF05739	SNARE	coord: 207..256 e-value: 7.3E-12 score: 45.1
IPR000727	Target SNARE coiled-coil homology domain	PROSITE	PS50192	T_SNARE	coord: 170..232 score: 14.997039
IPR006012	Syntaxin/epimorphin, conserved site	PROSITE	PS00914	SYNTAXIN	coord: 176..215

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh14G001950.1	CmoCh14G001950.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0048278	vesicle docking
biological_process	GO:0006906	vesicle fusion
cellular_component	GO:0012505	endomembrane system
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0031201	SNARE complex
cellular_component	GO:0016020	membrane
molecular_function	GO:0005484	SNAP receptor activity
molecular_function	GO:0000149	SNARE binding