CmoCh14G001850 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh14G001850
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	ribonuclease P protein subunit p29
Location	Cmo_Chr14: 849291 .. 853274 (-)
RNA-Seq Expression	CmoCh14G001850
Synteny	CmoCh14G001850

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCGCCACCGACGAATCGCCACCGCCTCTCCTCTCCTTCTCATCAATTTATTTATTTCACCGTTCGAACAAGCCTATTTCCCGTTGCCGCCCCTCCCTCGCATAGTCCGCCACTGCACCTCTCTCACCGCGCCGCTCGCTGCTCGCTGCTCGCCGATCCTGCTGGACATCGTCTCAGCGGCTGTCGCAGCACGCTGCAGTCTCATCTTTTCCGACTCCAAGGTCTGTTTTATCTGGGCATGTTATGTTAGTTTGTACATACACAATACTGAGAAGAAAATCAAGAGTGTTTGTTTAAGTTCTTCATCACTGTAAGTTCAATCAGTCTAAATGAAAATAGATGAAATAGAAAAAAAGAAAAAAAAAGCAGGTTGACTGGGTGCCGTTGTGTTTGCTTGAATAAATAAGAAGCTGCGTAATATAGAAGAAATTACTGGGAGGCAATCTGATTCCATTATTTTCTTACATGCCTAAATTCAATATCCTTCAAATTCGACCAATTTCGAAAGAATGGAGTAGCTGTTATGATTTTTTTTTGTTTTTTTTTTCGCAACGATAGCCGAATAGCCACTATAGAAACAGCCCTGCGACAAATTTGAACTGCCATGTGCTACCCTCTGCCTTTTGATTTGTTGCATATGTAAGTCAATTGAGGCTTTGATAATCTGTATAACGCTTTGGTCTCTACGGAAAATTGGCTTGTCTCTAAGATCATGACTTTTCTGTCAACACAATTATCAATCAAAGTAGTGTTCATGGACCTCTACCTTTGTTTTCTTTGCATGTTTTTTCAAGTTCTATGTATTAAAAAATCGTATATTGTTTCAGGAAGGGTTAATCAACTGTCCATTTCCAATGGCGGGCAATGTAGCTTCTCAAGATTTAAGGAAACACGCTTTGGAGGCATTGGAGAGGAGGTGTGCTGCTGCGAAAGTCGAACTTCTTCAACAACAGAAGAAGACTGGTTCTACAGAGAAATTAAAGAAAGAATTTAAGGGAAAAGCTACTTTGAACGACTCCTCTTCAACTGTTGTTTCGGGAAATCAGTATGATTCTTCAATTCTTTTGCCGTCTGAAGGGAAACCCTCAAATAAAGGTCCCCTCGTCGTAACTATGGTTTTAATATTTTCGTTTGCTGGGAAGGCAGTATGTTTTAGTTTGCTTATTATTAGTTGATTTCTTTCATGTGCAGATGTGAATGAAAGCGACCCTATATATTTCACCCTCTCAGCTGCTGTGAATGAAAATTTGATGTTTACAAATATGGATGTAAGTTGGCATCACTGGAAACTTAAAAGGGCCTTTCAACGTTTATAACTTGGTTTTCTGTTTCTTAAAAATTAAGCTTATAAATGTTATTTCATCCACACATTTGTATGTCTGCATCCAGCTTTTTGAAAGCAATTTGTGAATGAAAATTTGATGTTTACAAATATGGATGTAAGTTGGCATCACTGGAAACTTAAAAGGGCCTTTCAACGTTTATAACTTGGTTTTCTGTTTCTTAAAAATTAAGCTTATAAATGTTATTTCATCCACACATTTGTATGTCTGCATCCAGCTTTTTGAAAGCAATTTCAATATCTTAGCAAAATTTTGAAAACTGAAAAAGGTAGTCTTTAAAAATTTGTTTTTGAGATTTAGTTAAGAAATTAAACGGGGTATGAAAAAGATGAAAAAATACAGTAAAAATTGTGAGGAAATAAGCATCATTTTTAAAACATTAAACTAAAAAAGGAAACCGTTTATCAAACGAGAACTAATAAAACTCATACTGAATCTCACGTCTTCTGTAGGTTTCAAGTAATAGAGGAAGAGTGGTTGATAAGATTTGTCACGAGCTAAGAACTAGCGGTTACATTAAGCGGTCAAGAGAATTGAAAGTTGATGCTTGGATCCTTCTTGATAACTTTGTTCCCAAACGTGCTGAAATGATTGGCTCTCGGAAGAGAGCTTTGCAGAGCAGTTCAAAACGATCCAAAAGGCATATGTCCATGAAGCAACATAAAAAGTGTGGAACATTTGATCTGCCTTCTGATTTCCATAAGTGAGTTCCATTTTTCTCCTTGGTTTAGAGCTCTCATCACCATCTCCTCGCCCCATTTTATCCCATATAGGATTGAATAAGAAAATGATGCCGAATATGTCTGTTTATCCTGAAATTAGAATTAGAATTTAGTAGTTGATCGATATCCATGGAACATGAAATTTGGAAGGTTATTGAGTAAAGTCATGTTTGTTGCATTCTACTGAATGTTATACTTGTTCTTCATAAGCATCCATTGAAATGAGTTTTCTTCAGCTGCCACGATCATTTATGTTTGACAATGGATTATTTTGTTTGGAACAAGGCTGATGAAAGTGTCTAATTCTCCTGAAATTAGAATTAGAATCTATTTGTTGGTTATTATCCATCAAAACAGGATTAAGAAGGTTATTCATCAAAAGGGAATTAGAATCTCAAGAGTTCTAAGTTTGTTCTTCATAAGCATCCCATTGAAATGGGTTTTCTTTTGCTGTCACTATCATTTATGTTTGACCATAAATTATTGCGCTTTCTATTTCAGGTTTGAAATCTTTTGGCCAATGCACGATATGTGGAAAAGCTACATGAAACAACGGCTGTGCCATGTTGGGTTAGATTTTTACTTTTTGTTACATCAATGGTTTGCCTGTATTAGTGGTATGTTATCTATTTGATTGGGTGAGCGGAGTTTCAAATCTTGCAGGCCAGATACATTAGCTCGAAATCTTCTCGTCGTAGACCTTCATGGTGCCATGATCCTAGGTAAAACCATTCTTTTCTCCTATTGAATTGTTTGCATTCATATCATATTTATATAAATTCCTTGTTCATCAAATAAACCAATTTTCATACCACGAAAGAAAGCACAAAAAACAAGACCCAACCAACAAGAAGGCTACAGAAAGAAACAAAACAAGAACAATTAGAGAATTTTGTTGACAAGAACCATTAAAATGGTTCTGTAATAAGAGCATGAGGTTTCATACTAGTGTTTCTCTATCTCATATTGGCTATTTTATCATTTGATGATATCCACTGCAGTTGTTGAGTGTAAAATACCTGCTTTTACTGGAATAAGCGGCATCATGATTCGTGAAACTGCAGAAACATTTGGAATTTTTACTAAAGATGAGAAGTTTCGAGGTAACTCCTCCTTATGAATCTTAAATCTGTTGCATTTTCTGTGATCAAAACCAATTAAGTTCTATGAATTTGGGCAGGTTTTTCTAACAAATGACCTTGAATGTTTCTTTATTTGGTGGTTTTGATCTTGCAGTTGTGCCAAAGAAGTCTTCTGTGTTTATTTTCCAATGGGATTGTTGGAAAATTACCTTGCTCGGAGATAAACTCAGTTCAAGAATCCCCAGTTTGCCATCTAAAAATTGATTTCAGTCAATGATCTTCAATTATACAGTAATATTTACAGTGTACAGGTAATTCTCTGCTATTTAACCCATTAAAATGGGTTTTTTTTGGGGGTAGTTCATAAATATATTTAATTCTTTTTAAAATTTTAAATACTCAAATATAAATTTATAGTTTAATTAAATTGTAGAGGTGGTGGTCCATTATGCAGCAAGAAGCAGACAACGAGAAAGGGTTTGTTTGATGTCGAGACAAACATTAATTGACACCGACCACAATATGGCATAAGCCTTTCCTCTCTGCAACAGGATAGCCGCCGCGTTACGGTGGTTCCGCCGTACGTGCCTTCTCAGGTCCACCGTGTCGCTCTCTCTCTCCCCCACGGTTCCTCCGCCGGTACGGCCGCCCCACACCTACTCCCATGTGCGGCACTAACCCAGTTGTTTCACAACGCAATAAAACTTGTAATATTTTTATATTGATTATTTGCTTTATTTATTGGAATTTGAACTTTCTAGCTCTAAGAAAATAATATATATAAAAACTACCACCGAATTATATTCATTTTGAAAAAATTAATCATGATAATATTAT

mRNA sequence

CCCGCCACCGACGAATCGCCACCGCCTCTCCTCTCCTTCTCATCAATTTATTTATTTCACCGTTCGAACAAGCCTATTTCCCGTTGCCGCCCCTCCCTCGCATAGTCCGCCACTGCACCTCTCTCACCGCGCCGCTCGCTGCTCGCTGCTCGCCGATCCTGCTGGACATCGTCTCAGCGGCTGTCGCAGCACGCTGCAGTCTCATCTTTTCCGACTCCAAGGAAGGGTTAATCAACTGTCCATTTCCAATGGCGGGCAATGTAGCTTCTCAAGATTTAAGGAAACACGCTTTGGAGGCATTGGAGAGGAGGTGTGCTGCTGCGAAAGTCGAACTTCTTCAACAACAGAAGAAGACTGGTTCTACAGAGAAATTAAAGAAAGAATTTAAGGGAAAAGCTACTTTGAACGACTCCTCTTCAACTGTTGTTTCGGGAAATCAGTATGATTCTTCAATTCTTTTGCCGTCTGAAGGGAAACCCTCAAATAAAGATGTGAATGAAAGCGACCCTATATATTTCACCCTCTCAGCTGCTGTGAATGAAAATTTGATGTTTACAAATATGGATGTTTCAAGTAATAGAGGAAGAGTGGTTGATAAGATTTGTCACGAGCTAAGAACTAGCGGTTACATTAAGCGGTCAAGAGAATTGAAAGTTGATGCTTGGATCCTTCTTGATAACTTTGTTCCCAAACGTGCTGAAATGATTGGCTCTCGGAAGAGAGCTTTGCAGAGCAGTTCAAAACGATCCAAAAGGCATATGTCCATGAAGCAACATAAAAAGTGTGGAACATTTGATCTGCCTTCTGATTTCCATAAGTTTGAAATCTTTTGGCCAATGCACGATATGTGGAAAAGCTACATGAAACAACGGCTGTGCCATGTTGGGCCAGATACATTAGCTCGAAATCTTCTCGTCGTAGACCTTCATGGTGCCATGATCCTAGTTGTTGAGTGTAAAATACCTGCTTTTACTGGAATAAGCGGCATCATGATTCGTGAAACTGCAGAAACATTTGGAATTTTTACTAAAGATGAGAAGTTTCGAGTTGTGCCAAAGAAGTCTTCTGTGTTTATTTTCCAATGGGATTGTTGGAAAATTACCTTGCTCGGAGATAAACTCAGTTCAAGAATCCCCAGTTTGCCATCTAAAAATTGATTTCAGTCAATGATCTTCAATTATACAGTAATATTTACAGTGTACAGAGGTGGTGGTCCATTATGCAGCAAGAAGCAGACAACGAGAAAGGGTTTGTTTGATGTCGAGACAAACATTAATTGACACCGACCACAATATGGCATAAGCCTTTCCTCTCTGCAACAGGATAGCCGCCGCGTTACGGTGGTTCCGCCGTACGTGCCTTCTCAGGTCCACCGTGTCGCTCTCTCTCTCCCCCACGGTTCCTCCGCCGGTACGGCCGCCCCACACCTACTCCCATGTGCGGCACTAACCCAGTTGTTTCACAACGCAATAAAACTTGTAATATTTTTATATTGATTATTTGCTTTATTTATTGGAATTTGAACTTTCTAGCTCTAAGAAAATAATATATATAAAAACTACCACCGAATTATATTCATTTTGAAAAAATTAATCATGATAATATTAT

Coding sequence (CDS)

ATGGCGGGCAATGTAGCTTCTCAAGATTTAAGGAAACACGCTTTGGAGGCATTGGAGAGGAGGTGTGCTGCTGCGAAAGTCGAACTTCTTCAACAACAGAAGAAGACTGGTTCTACAGAGAAATTAAAGAAAGAATTTAAGGGAAAAGCTACTTTGAACGACTCCTCTTCAACTGTTGTTTCGGGAAATCAGTATGATTCTTCAATTCTTTTGCCGTCTGAAGGGAAACCCTCAAATAAAGATGTGAATGAAAGCGACCCTATATATTTCACCCTCTCAGCTGCTGTGAATGAAAATTTGATGTTTACAAATATGGATGTTTCAAGTAATAGAGGAAGAGTGGTTGATAAGATTTGTCACGAGCTAAGAACTAGCGGTTACATTAAGCGGTCAAGAGAATTGAAAGTTGATGCTTGGATCCTTCTTGATAACTTTGTTCCCAAACGTGCTGAAATGATTGGCTCTCGGAAGAGAGCTTTGCAGAGCAGTTCAAAACGATCCAAAAGGCATATGTCCATGAAGCAACATAAAAAGTGTGGAACATTTGATCTGCCTTCTGATTTCCATAAGTTTGAAATCTTTTGGCCAATGCACGATATGTGGAAAAGCTACATGAAACAACGGCTGTGCCATGTTGGGCCAGATACATTAGCTCGAAATCTTCTCGTCGTAGACCTTCATGGTGCCATGATCCTAGTTGTTGAGTGTAAAATACCTGCTTTTACTGGAATAAGCGGCATCATGATTCGTGAAACTGCAGAAACATTTGGAATTTTTACTAAAGATGAGAAGTTTCGAGTTGTGCCAAAGAAGTCTTCTGTGTTTATTTTCCAATGGGATTGTTGGAAAATTACCTTGCTCGGAGATAAACTCAGTTCAAGAATCCCCAGTTTGCCATCTAAAAATTGA

Protein sequence

MAGNVASQDLRKHALEALERRCAAAKVELLQQQKKTGSTEKLKKEFKGKATLNDSSSTVVSGNQYDSSILLPSEGKPSNKDVNESDPIYFTLSAAVNENLMFTNMDVSSNRGRVVDKICHELRTSGYIKRSRELKVDAWILLDNFVPKRAEMIGSRKRALQSSSKRSKRHMSMKQHKKCGTFDLPSDFHKFEIFWPMHDMWKSYMKQRLCHVGPDTLARNLLVVDLHGAMILVVECKIPAFTGISGIMIRETAETFGIFTKDEKFRVVPKKSSVFIFQWDCWKITLLGDKLSSRIPSLPSKN

Homology

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BLAST of CmoCh14G001850 vs. ExPASy Swiss-Prot
Match: Q9ZW76 (Ribonuclease MRP protein subunit POP4 OS=Arabidopsis thaliana OX=3702 GN=POP4 PE=2 SV=2)

HSP 1 Score: 243.0 bits (619), Expect = 4.2e-63
Identity = 144/302 (47.68%), Postives = 186/302 (61.59%), Query Frame = 0


Query: 1   MAGNVASQDLRKHALEALERRCAAAKVELLQQQKKTGSTEKLKKEFKGKATLNDSSSTVV 60
           M       D  + A+ A+ERR A AK +LLQQQ+        +K  K K   +D   ++ 
Sbjct: 1   MGTETVVHDQARWAMAAMERRLAVAKAQLLQQQQ--------QKNEKDKKGTSDVDVSMK 60

Query: 61  SGNQYDSSILLPSEGKPSNKDVNESDP---IYFTLSAAVNENLMFTNMDVSSNRGRVVDK 120
             +Q DS   LP+  K S K V+  D     Y  LS  V+ENL+ TN+  SS +G +VDK
Sbjct: 61  ESHQADS---LPTPSKTSIKKVDPKDDDSVAYTKLSHPVDENLLATNVKFSSAKGTIVDK 120

Query: 121 ICHELRTSG-----YIKRSRELKVDAWILLDNFVPKRAEMIGSRKRALQSSSKRSKRHMS 180
           + H L  SG     Y++ ++ +K+D +ILLDNFV  R+   GS K+A Q  SKRSK  MS
Sbjct: 121 VLHNLLRSGDSAQKYLQGTKSVKLDNYILLDNFVQSRSSASGS-KKASQKDSKRSKSRMS 180

Query: 181 MKQHKKCGTFDLPSDFHKFEIFWPMHDMWKSYMKQRLCHVGPDTLARNLLVVDLHGAMIL 240
           MK+ KK G   +P D  KF++F PMH MW+SYM + +   G   L+  LL  DLHGA + 
Sbjct: 181 MKRLKKSGALHIPKDLQKFDLFKPMHGMWESYMMKLIKVTGKIQLSLTLLSADLHGAFMF 240

Query: 241 VVECKIPAFTGISGIMIRETAETFGIFTKDEKFRVVPKKSSVFIFQWDCWKITLLGDKLS 295
           V ECKI +FTG+ GIM+RET+ETFGI T+D+KFRVVPKK SVFI Q DCWKITL GDK  
Sbjct: 241 VAECKIASFTGVQGIMVRETSETFGIITRDDKFRVVPKKLSVFIIQLDCWKITLHGDKFI 290

[Close]

BLAST of CmoCh14G001850 vs. ExPASy Swiss-Prot
Match: Q5M882 (Ribonuclease P protein subunit p29 OS=Rattus norvegicus OX=10116 GN=Pop4 PE=2 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 8.3e-19
Identity = 45/141 (31.91%), Postives = 81/141 (57.45%), Query Frame = 0


Query: 165 KRSKRHMSMKQHKKCGTFDLPSDFHKFEIFWPMHDMWKSYMKQRLCHVGPDT----LARN 224
           K+  + +S KQ ++   FD+  +  ++ +F P+H++WK Y++     + PDT    +   
Sbjct: 71  KKKSKGLSAKQRRELRLFDIKPEQQRYSLFLPLHELWKQYIRDLCNGLKPDTQPQMIQAK 130

Query: 225 LLVVDLHGAMILVVECKIPAFTGISGIMIRETAETFGIFTKDEKFRVVPKKSSVFIFQWD 284
           LL  DLHGA+I V + K P++ G++GI+++ET   F I TK++  +V+PK++ VF  + D
Sbjct: 131 LLKADLHGAVISVTKSKCPSYVGVTGILLQETKHVFKIITKEDHLKVIPKQNCVFTIEID 190

Query: 285 CWKITLLGDKLSSRIPSLPSK 302
            +   + G K   R     +K
Sbjct: 191 DFISYIYGSKFQLRASERSAK 211

[Close]

BLAST of CmoCh14G001850 vs. ExPASy Swiss-Prot
Match: Q2KIB9 (Ribonuclease P protein subunit p29 OS=Bos taurus OX=9913 GN=POP4 PE=2 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 1.1e-18
Identity = 45/157 (28.66%), Postives = 89/157 (56.69%), Query Frame = 0


Query: 142 LDNFVPKRAEMIGSRKRALQSSSKRSKRHMSMKQHKKCGTFDLPSDFHKFEIFWPMHDMW 201
           L++ + ++A ++       Q   ++  + +S KQ ++   FD+  +  ++ +F P+H++W
Sbjct: 47  LEDHLQRKAVVLEYFTHRKQKEKRKKSKGLSAKQRRELRLFDIKPEQQRYSLFLPLHELW 106

Query: 202 KSYMKQRLCHVGPDT----LARNLLVVDLHGAMILVVECKIPAFTGISGIMIRETAETFG 261
           K Y++     + PDT    +   LL  DLHGA++ V + K P++ G++GI+++ET   F 
Sbjct: 107 KQYIRDLCNGLKPDTQPQMIQAKLLKADLHGAIVSVTKSKCPSYVGVTGILLQETKHVFK 166

Query: 262 IFTKDEKFRVVPKKSSVFIFQWDCWKITLLGDKLSSR 295
           I TK+++ +V+PK + VF  + D +   + G K   R
Sbjct: 167 IITKEDRLKVIPKLNCVFTVEIDGFISYIYGSKFQLR 203

[Close]

BLAST of CmoCh14G001850 vs. ExPASy Swiss-Prot
Match: O95707 (Ribonuclease P protein subunit p29 OS=Homo sapiens OX=9606 GN=POP4 PE=1 SV=2)

HSP 1 Score: 94.0 bits (232), Expect = 3.2e-18
Identity = 46/151 (30.46%), Postives = 86/151 (56.95%), Query Frame = 0


Query: 148 KRAEMIGSRKRALQSSSKRSKRHMSMKQHKKCGTFDLPSDFHKFEIFWPMHDMWKSYMKQ 207
           ++A ++    R  +   K+  + +S +Q ++   FD+  +  ++ +F P+H++WK Y++ 
Sbjct: 53  RKAVVLEYFTRHKRKEKKKKAKGLSARQRRELRLFDIKPEQQRYSLFLPLHELWKQYIRD 112

Query: 208 RLCHVGPDT----LARNLLVVDLHGAMILVVECKIPAFTGISGIMIRETAETFGIFTKDE 267
               + PDT    +   LL  DLHGA+I V + K P++ GI+GI+++ET   F I TK++
Sbjct: 113 LCSGLKPDTQPQMIQAKLLKADLHGAIISVTKSKCPSYVGITGILLQETKHIFKIITKED 172

Query: 268 KFRVVPKKSSVFIFQWDCWKITLLGDKLSSR 295
           + +V+PK + VF  + D +   + G K   R
Sbjct: 173 RLKVIPKLNCVFTVETDGFISYIYGSKFQLR 203

[Close]

BLAST of CmoCh14G001850 vs. ExPASy Swiss-Prot
Match: Q9CR08 (Ribonuclease P protein subunit p29 OS=Mus musculus OX=10090 GN=Pop4 PE=2 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 7.0e-18
Identity = 44/141 (31.21%), Postives = 79/141 (56.03%), Query Frame = 0


Query: 165 KRSKRHMSMKQHKKCGTFDLPSDFHKFEIFWPMHDMWKSYMKQRLCHVGPDT----LARN 224
           K+  + +S KQ +    FD+  +  ++ +F P+H++WK Y++     + PDT    +   
Sbjct: 71  KKKSKGLSAKQRRDMRLFDIKPEQQRYSLFLPLHELWKQYIRDLCNGLKPDTQPQMIQAK 130

Query: 225 LLVVDLHGAMILVVECKIPAFTGISGIMIRETAETFGIFTKDEKFRVVPKKSSVFIFQWD 284
           LL  DLHGA+I V + K P++ G++GI+++ET   F I T+++  +V+PK + VF  + D
Sbjct: 131 LLKADLHGAIISVTKSKCPSYVGVTGILLQETKHVFKIITREDHLKVIPKLNCVFTIEID 190

Query: 285 CWKITLLGDKLSSRIPSLPSK 302
            +   + G K   R     +K
Sbjct: 191 DFISYIYGSKFQLRASERSAK 211

[Close]

BLAST of CmoCh14G001850 vs. ExPASy TrEMBL
Match: A0A6J1F2W6 (ribonuclease P protein subunit p29 OS=Cucurbita moschata OX=3662 GN=LOC111441684 PE=3 SV=1)

HSP 1 Score: 599.4 bits (1544), Expect = 8.6e-168
Identity = 302/302 (100.00%), Postives = 302/302 (100.00%), Query Frame = 0


Query: 1   MAGNVASQDLRKHALEALERRCAAAKVELLQQQKKTGSTEKLKKEFKGKATLNDSSSTVV 60
           MAGNVASQDLRKHALEALERRCAAAKVELLQQQKKTGSTEKLKKEFKGKATLNDSSSTVV
Sbjct: 1   MAGNVASQDLRKHALEALERRCAAAKVELLQQQKKTGSTEKLKKEFKGKATLNDSSSTVV 60

Query: 61  SGNQYDSSILLPSEGKPSNKDVNESDPIYFTLSAAVNENLMFTNMDVSSNRGRVVDKICH 120
           SGNQYDSSILLPSEGKPSNKDVNESDPIYFTLSAAVNENLMFTNMDVSSNRGRVVDKICH
Sbjct: 61  SGNQYDSSILLPSEGKPSNKDVNESDPIYFTLSAAVNENLMFTNMDVSSNRGRVVDKICH 120

Query: 121 ELRTSGYIKRSRELKVDAWILLDNFVPKRAEMIGSRKRALQSSSKRSKRHMSMKQHKKCG 180
           ELRTSGYIKRSRELKVDAWILLDNFVPKRAEMIGSRKRALQSSSKRSKRHMSMKQHKKCG
Sbjct: 121 ELRTSGYIKRSRELKVDAWILLDNFVPKRAEMIGSRKRALQSSSKRSKRHMSMKQHKKCG 180

Query: 181 TFDLPSDFHKFEIFWPMHDMWKSYMKQRLCHVGPDTLARNLLVVDLHGAMILVVECKIPA 240
           TFDLPSDFHKFEIFWPMHDMWKSYMKQRLCHVGPDTLARNLLVVDLHGAMILVVECKIPA
Sbjct: 181 TFDLPSDFHKFEIFWPMHDMWKSYMKQRLCHVGPDTLARNLLVVDLHGAMILVVECKIPA 240

Query: 241 FTGISGIMIRETAETFGIFTKDEKFRVVPKKSSVFIFQWDCWKITLLGDKLSSRIPSLPS 300
           FTGISGIMIRETAETFGIFTKDEKFRVVPKKSSVFIFQWDCWKITLLGDKLSSRIPSLPS
Sbjct: 241 FTGISGIMIRETAETFGIFTKDEKFRVVPKKSSVFIFQWDCWKITLLGDKLSSRIPSLPS 300

Query: 301 KN 303
           KN
Sbjct: 301 KN 302

[Close]

BLAST of CmoCh14G001850 vs. ExPASy TrEMBL
Match: A0A6J1J0L0 (uncharacterized protein LOC111482383 OS=Cucurbita maxima OX=3661 GN=LOC111482383 PE=3 SV=1)

HSP 1 Score: 580.1 bits (1494), Expect = 5.4e-162
Identity = 292/302 (96.69%), Postives = 296/302 (98.01%), Query Frame = 0


Query: 1   MAGNVASQDLRKHALEALERRCAAAKVELLQQQKKTGSTEKLKKEFKGKATLNDSSSTVV 60
           MAGNVASQDLRKHALEALERRCAAAKVELLQQQKKTGSTEKLKKEFKGKATLNDSSS+VV
Sbjct: 1   MAGNVASQDLRKHALEALERRCAAAKVELLQQQKKTGSTEKLKKEFKGKATLNDSSSSVV 60

Query: 61  SGNQYDSSILLPSEGKPSNKDVNESDPIYFTLSAAVNENLMFTNMDVSSNRGRVVDKICH 120
           SGNQYDSSILLPSEGKPSNKDVNESDPIYFTLSAAVNENLM TNMDVSSNRGRVVDKICH
Sbjct: 61  SGNQYDSSILLPSEGKPSNKDVNESDPIYFTLSAAVNENLMSTNMDVSSNRGRVVDKICH 120

Query: 121 ELRTSGYIKRSRELKVDAWILLDNFVPKRAEMIGSRKRALQSSSKRSKRHMSMKQHKKCG 180
           +LRTSGYIKRSRELKVDAWILLDNFVPKRA  IGSRKRALQS+SKRSKRHMSMKQHKKCG
Sbjct: 121 KLRTSGYIKRSRELKVDAWILLDNFVPKRAGKIGSRKRALQSNSKRSKRHMSMKQHKKCG 180

Query: 181 TFDLPSDFHKFEIFWPMHDMWKSYMKQRLCHVGPDTLARNLLVVDLHGAMILVVECKIPA 240
           TFDLPSDFHKFEIFWPMHDMWKSYMKQRLCHVGPDTLARNLLV DLHGAMILVVECKIPA
Sbjct: 181 TFDLPSDFHKFEIFWPMHDMWKSYMKQRLCHVGPDTLARNLLVADLHGAMILVVECKIPA 240

Query: 241 FTGISGIMIRETAETFGIFTKDEKFRVVPKKSSVFIFQWDCWKITLLGDKLSSRIPSLPS 300
           FTGISGIMIRETAETFGI TKD+KFRVVPKKSS FIFQWDCWKITLLGDKLSSRIPSLPS
Sbjct: 241 FTGISGIMIRETAETFGIVTKDDKFRVVPKKSSAFIFQWDCWKITLLGDKLSSRIPSLPS 300

Query: 301 KN 303
           KN
Sbjct: 301 KN 302

[Close]

BLAST of CmoCh14G001850 vs. ExPASy TrEMBL
Match: A0A1S3B6Y6 (uncharacterized protein LOC103486457 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486457 PE=3 SV=1)

HSP 1 Score: 495.4 bits (1274), Expect = 1.7e-136
Identity = 255/302 (84.44%), Postives = 272/302 (90.07%), Query Frame = 0


Query: 1   MAGNVASQDLRKHALEALERRCAAAKVELLQQQKKTGSTEKLKKEFKGKATLNDSSSTVV 60
           M+   ASQDLRKHALEALERRCAAAKVELLQQQ K  STEK KKE KGK++LND +S VV
Sbjct: 1   MSDKKASQDLRKHALEALERRCAAAKVELLQQQ-KISSTEKSKKEVKGKSSLNDPTS-VV 60

Query: 61  SGNQYDSSILLPSEGKPSNKDVNESDPIYFTLSAAVNENLMFTNMDVSSNRGRVVDKICH 120
           S NQY+SSI LPSEGKP NKDVNESDPIYFTLSAAVNE LM ++MDVS NRGRVVDKICH
Sbjct: 61  SRNQYNSSITLPSEGKPPNKDVNESDPIYFTLSAAVNEKLMASSMDVSKNRGRVVDKICH 120

Query: 121 ELRTSGYIKRSRELKVDAWILLDNFVPKRAEMIGSRKRALQSSSKRSKRHMSMKQHKKCG 180
           EL+ SGY+KRS+ELKVDA ILLDNFVPKRA MIGSR R L+S SKRSKRHMSMKQHKKCG
Sbjct: 121 ELKNSGYMKRSKELKVDASILLDNFVPKRAGMIGSRMRDLRSISKRSKRHMSMKQHKKCG 180

Query: 181 TFDLPSDFHKFEIFWPMHDMWKSYMKQRLCHVGPDTLARNLLVVDLHGAMILVVECKIPA 240
           TFDLPSD HK+EIFWPMHDMWKSYMKQRL +VGPD LARNLL+ DLHGAMI VVECKIPA
Sbjct: 181 TFDLPSDCHKYEIFWPMHDMWKSYMKQRLHNVGPDALARNLLIADLHGAMIRVVECKIPA 240

Query: 241 FTGISGIMIRETAETFGIFTKDEKFRVVPKKSSVFIFQWDCWKITLLGDKLSSRIPSLPS 300
           FTG SG+MIRETAETFGI TKD+KFRVVPKKSSVFIFQWDCWK+TLLGDKLSSRIPSLPS
Sbjct: 241 FTGTSGVMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKVTLLGDKLSSRIPSLPS 300

Query: 301 KN 303
            N
Sbjct: 301 SN 300

[Close]

BLAST of CmoCh14G001850 vs. ExPASy TrEMBL
Match: A0A5A7TR23 (Ribonuclease P protein subunit p29 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G003780 PE=3 SV=1)

HSP 1 Score: 495.4 bits (1274), Expect = 1.7e-136
Identity = 255/302 (84.44%), Postives = 272/302 (90.07%), Query Frame = 0


Query: 1   MAGNVASQDLRKHALEALERRCAAAKVELLQQQKKTGSTEKLKKEFKGKATLNDSSSTVV 60
           M+   ASQDLRKHALEALERRCAAAKVELLQQQ K  STEK KKE KGK++LND +S VV
Sbjct: 1   MSDKKASQDLRKHALEALERRCAAAKVELLQQQ-KISSTEKSKKEVKGKSSLNDPTS-VV 60

Query: 61  SGNQYDSSILLPSEGKPSNKDVNESDPIYFTLSAAVNENLMFTNMDVSSNRGRVVDKICH 120
           S NQY+SSI LPSEGKP NKDVNESDPIYFTLSAAVNE LM ++MDVS NRGRVVDKICH
Sbjct: 61  SRNQYNSSITLPSEGKPPNKDVNESDPIYFTLSAAVNEKLMASSMDVSKNRGRVVDKICH 120

Query: 121 ELRTSGYIKRSRELKVDAWILLDNFVPKRAEMIGSRKRALQSSSKRSKRHMSMKQHKKCG 180
           EL+ SGY+KRS+ELKVDA ILLDNFVPKRA MIGSR R L+S SKRSKRHMSMKQHKKCG
Sbjct: 121 ELKNSGYMKRSKELKVDASILLDNFVPKRAGMIGSRMRDLRSISKRSKRHMSMKQHKKCG 180

Query: 181 TFDLPSDFHKFEIFWPMHDMWKSYMKQRLCHVGPDTLARNLLVVDLHGAMILVVECKIPA 240
           TFDLPSD HK+EIFWPMHDMWKSYMKQRL +VGPD LARNLL+ DLHGAMI VVECKIPA
Sbjct: 181 TFDLPSDCHKYEIFWPMHDMWKSYMKQRLHNVGPDALARNLLIADLHGAMIRVVECKIPA 240

Query: 241 FTGISGIMIRETAETFGIFTKDEKFRVVPKKSSVFIFQWDCWKITLLGDKLSSRIPSLPS 300
           FTG SG+MIRETAETFGI TKD+KFRVVPKKSSVFIFQWDCWK+TLLGDKLSSRIPSLPS
Sbjct: 241 FTGTSGVMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKVTLLGDKLSSRIPSLPS 300

Query: 301 KN 303
            N
Sbjct: 301 SN 300

[Close]

BLAST of CmoCh14G001850 vs. ExPASy TrEMBL
Match: A0A1S3B674 (Ribonuclease P protein subunit p29 OS=Cucumis melo OX=3656 GN=LOC103486457 PE=3 SV=1)

HSP 1 Score: 495.4 bits (1274), Expect = 1.7e-136
Identity = 255/302 (84.44%), Postives = 272/302 (90.07%), Query Frame = 0


Query: 1   MAGNVASQDLRKHALEALERRCAAAKVELLQQQKKTGSTEKLKKEFKGKATLNDSSSTVV 60
           M+   ASQDLRKHALEALERRCAAAKVELLQQQ K  STEK KKE KGK++LND +S VV
Sbjct: 14  MSDKKASQDLRKHALEALERRCAAAKVELLQQQ-KISSTEKSKKEVKGKSSLNDPTS-VV 73

Query: 61  SGNQYDSSILLPSEGKPSNKDVNESDPIYFTLSAAVNENLMFTNMDVSSNRGRVVDKICH 120
           S NQY+SSI LPSEGKP NKDVNESDPIYFTLSAAVNE LM ++MDVS NRGRVVDKICH
Sbjct: 74  SRNQYNSSITLPSEGKPPNKDVNESDPIYFTLSAAVNEKLMASSMDVSKNRGRVVDKICH 133

Query: 121 ELRTSGYIKRSRELKVDAWILLDNFVPKRAEMIGSRKRALQSSSKRSKRHMSMKQHKKCG 180
           EL+ SGY+KRS+ELKVDA ILLDNFVPKRA MIGSR R L+S SKRSKRHMSMKQHKKCG
Sbjct: 134 ELKNSGYMKRSKELKVDASILLDNFVPKRAGMIGSRMRDLRSISKRSKRHMSMKQHKKCG 193

Query: 181 TFDLPSDFHKFEIFWPMHDMWKSYMKQRLCHVGPDTLARNLLVVDLHGAMILVVECKIPA 240
           TFDLPSD HK+EIFWPMHDMWKSYMKQRL +VGPD LARNLL+ DLHGAMI VVECKIPA
Sbjct: 194 TFDLPSDCHKYEIFWPMHDMWKSYMKQRLHNVGPDALARNLLIADLHGAMIRVVECKIPA 253

Query: 241 FTGISGIMIRETAETFGIFTKDEKFRVVPKKSSVFIFQWDCWKITLLGDKLSSRIPSLPS 300
           FTG SG+MIRETAETFGI TKD+KFRVVPKKSSVFIFQWDCWK+TLLGDKLSSRIPSLPS
Sbjct: 254 FTGTSGVMIRETAETFGIVTKDDKFRVVPKKSSVFIFQWDCWKVTLLGDKLSSRIPSLPS 313

Query: 301 KN 303
            N
Sbjct: 314 SN 313

[Close]

BLAST of CmoCh14G001850 vs. TAIR 10
Match: AT2G43190.3 (ribonuclease P family protein )

HSP 1 Score: 243.8 bits (621), Expect = 1.8e-64
Identity = 144/301 (47.84%), Postives = 188/301 (62.46%), Query Frame = 0


Query: 1   MAGNVASQDLRKHALEALERRCAAAKVELLQQQKKTGSTEKLKKEFKGKATLNDSSSTVV 60
           M       D  + A+ A+ERR A AK +LLQQQ+        +K  K K   +D   ++ 
Sbjct: 1   MGTETVVHDQARWAMAAMERRLAVAKAQLLQQQQ--------QKNEKDKKGTSDVDVSMK 60

Query: 61  SGNQYDSSILLPSEGKPS-NKDVNESDPIYFT-LSAAVNENLMFTNMDVSSNRGRVVDKI 120
             +Q DS   LP+  K S  KD  + D + +T LS  V+ENL+ TN+  SS +G +VDK+
Sbjct: 61  ESHQADS---LPTPSKTSIKKDPKDDDSVAYTKLSHPVDENLLATNVKFSSAKGTIVDKV 120

Query: 121 CHELRTSG-----YIKRSRELKVDAWILLDNFVPKRAEMIGSRKRALQSSSKRSKRHMSM 180
            H L  SG     Y++ ++ +K+D +ILLDNFV  R+   GS K+A Q  SKRSK  MSM
Sbjct: 121 LHNLLRSGDSAQKYLQGTKSVKLDNYILLDNFVQSRSSASGS-KKASQKDSKRSKSRMSM 180

Query: 181 KQHKKCGTFDLPSDFHKFEIFWPMHDMWKSYMKQRLCHVGPDTLARNLLVVDLHGAMILV 240
           K+ KK G   +P D  KF++F PMH MW+SYM + +   G   L+  LL  DLHGA + V
Sbjct: 181 KRLKKSGALHIPKDLQKFDLFKPMHGMWESYMMKLIKVTGKIQLSLTLLSADLHGAFMFV 240

Query: 241 VECKIPAFTGISGIMIRETAETFGIFTKDEKFRVVPKKSSVFIFQWDCWKITLLGDKLSS 295
            ECKI +FTG+ GIM+RET+ETFGI T+D+KFRVVPKK SVFI Q DCWKITL GDK  S
Sbjct: 241 AECKIASFTGVQGIMVRETSETFGIITRDDKFRVVPKKLSVFIIQLDCWKITLHGDKFIS 289

[Close]

BLAST of CmoCh14G001850 vs. TAIR 10
Match: AT2G43190.2 (ribonuclease P family protein )

HSP 1 Score: 243.8 bits (621), Expect = 1.8e-64
Identity = 144/301 (47.84%), Postives = 188/301 (62.46%), Query Frame = 0


Query: 1   MAGNVASQDLRKHALEALERRCAAAKVELLQQQKKTGSTEKLKKEFKGKATLNDSSSTVV 60
           M       D  + A+ A+ERR A AK +LLQQQ+        +K  K K   +D   ++ 
Sbjct: 1   MGTETVVHDQARWAMAAMERRLAVAKAQLLQQQQ--------QKNEKDKKGTSDVDVSMK 60

Query: 61  SGNQYDSSILLPSEGKPS-NKDVNESDPIYFT-LSAAVNENLMFTNMDVSSNRGRVVDKI 120
             +Q DS   LP+  K S  KD  + D + +T LS  V+ENL+ TN+  SS +G +VDK+
Sbjct: 61  ESHQADS---LPTPSKTSIKKDPKDDDSVAYTKLSHPVDENLLATNVKFSSAKGTIVDKV 120

Query: 121 CHELRTSG-----YIKRSRELKVDAWILLDNFVPKRAEMIGSRKRALQSSSKRSKRHMSM 180
            H L  SG     Y++ ++ +K+D +ILLDNFV  R+   GS K+A Q  SKRSK  MSM
Sbjct: 121 LHNLLRSGDSAQKYLQGTKSVKLDNYILLDNFVQSRSSASGS-KKASQKDSKRSKSRMSM 180

Query: 181 KQHKKCGTFDLPSDFHKFEIFWPMHDMWKSYMKQRLCHVGPDTLARNLLVVDLHGAMILV 240
           K+ KK G   +P D  KF++F PMH MW+SYM + +   G   L+  LL  DLHGA + V
Sbjct: 181 KRLKKSGALHIPKDLQKFDLFKPMHGMWESYMMKLIKVTGKIQLSLTLLSADLHGAFMFV 240

Query: 241 VECKIPAFTGISGIMIRETAETFGIFTKDEKFRVVPKKSSVFIFQWDCWKITLLGDKLSS 295
            ECKI +FTG+ GIM+RET+ETFGI T+D+KFRVVPKK SVFI Q DCWKITL GDK  S
Sbjct: 241 AECKIASFTGVQGIMVRETSETFGIITRDDKFRVVPKKLSVFIIQLDCWKITLHGDKFIS 289

[Close]

BLAST of CmoCh14G001850 vs. TAIR 10
Match: AT2G43190.1 (ribonuclease P family protein )

HSP 1 Score: 243.0 bits (619), Expect = 3.0e-64
Identity = 144/302 (47.68%), Postives = 186/302 (61.59%), Query Frame = 0


Query: 1   MAGNVASQDLRKHALEALERRCAAAKVELLQQQKKTGSTEKLKKEFKGKATLNDSSSTVV 60
           M       D  + A+ A+ERR A AK +LLQQQ+        +K  K K   +D   ++ 
Sbjct: 1   MGTETVVHDQARWAMAAMERRLAVAKAQLLQQQQ--------QKNEKDKKGTSDVDVSMK 60

Query: 61  SGNQYDSSILLPSEGKPSNKDVNESDP---IYFTLSAAVNENLMFTNMDVSSNRGRVVDK 120
             +Q DS   LP+  K S K V+  D     Y  LS  V+ENL+ TN+  SS +G +VDK
Sbjct: 61  ESHQADS---LPTPSKTSIKKVDPKDDDSVAYTKLSHPVDENLLATNVKFSSAKGTIVDK 120

Query: 121 ICHELRTSG-----YIKRSRELKVDAWILLDNFVPKRAEMIGSRKRALQSSSKRSKRHMS 180
           + H L  SG     Y++ ++ +K+D +ILLDNFV  R+   GS K+A Q  SKRSK  MS
Sbjct: 121 VLHNLLRSGDSAQKYLQGTKSVKLDNYILLDNFVQSRSSASGS-KKASQKDSKRSKSRMS 180

Query: 181 MKQHKKCGTFDLPSDFHKFEIFWPMHDMWKSYMKQRLCHVGPDTLARNLLVVDLHGAMIL 240
           MK+ KK G   +P D  KF++F PMH MW+SYM + +   G   L+  LL  DLHGA + 
Sbjct: 181 MKRLKKSGALHIPKDLQKFDLFKPMHGMWESYMMKLIKVTGKIQLSLTLLSADLHGAFMF 240

Query: 241 VVECKIPAFTGISGIMIRETAETFGIFTKDEKFRVVPKKSSVFIFQWDCWKITLLGDKLS 295
           V ECKI +FTG+ GIM+RET+ETFGI T+D+KFRVVPKK SVFI Q DCWKITL GDK  
Sbjct: 241 VAECKIASFTGVQGIMVRETSETFGIITRDDKFRVVPKKLSVFIIQLDCWKITLHGDKFI 290

[Close]

BLAST of CmoCh14G001850 vs. TAIR 10
Match: AT2G43190.4 (ribonuclease P family protein )

HSP 1 Score: 201.8 bits (512), Expect = 7.7e-52
Identity = 130/297 (43.77%), Postives = 164/297 (55.22%), Query Frame = 0


Query: 1   MAGNVASQDLRKHALEALERRCAAAKVELLQQQKKTGSTEKLKKEFKGKATLNDSSSTVV 60
           M       D  + A+ A+ERR A AK +LLQQQ+        +K  K K   +D   ++ 
Sbjct: 1   MGTETVVHDQARWAMAAMERRLAVAKAQLLQQQQ--------QKNEKDKKGTSDVDVSMK 60

Query: 61  SGNQYDSSILLPSEGKPSNKDVNESDP---IYFTLSAAVNENLMFTNMDVSSNRGRVVDK 120
             +Q DS   LP+  K S K V+  D     Y  LS  V+ENL+ TN+  SS +G +VDK
Sbjct: 61  ESHQADS---LPTPSKTSIKKVDPKDDDSVAYTKLSHPVDENLLATNVKFSSAKGTIVDK 120

Query: 121 ICHELRTSGYIKRSRELKVDAWILLDNFVPKRAEMIGSRKRALQSSSKRSKRHMSMKQHK 180
                                          R+   GS K+A Q  SKRSK  MSMK+ K
Sbjct: 121 ------------------------------SRSSASGS-KKASQKDSKRSKSRMSMKRLK 180

Query: 181 KCGTFDLPSDFHKFEIFWPMHDMWKSYMKQRLCHVGPDTLARNLLVVDLHGAMILVVECK 240
           K G   +P D  KF++F PMH MW+SYM + +   G   L+  LL  DLHGA + V ECK
Sbjct: 181 KSGALHIPKDLQKFDLFKPMHGMWESYMMKLIKVTGKIQLSLTLLSADLHGAFMFVAECK 240

Query: 241 IPAFTGISGIMIRETAETFGIFTKDEKFRVVPKKSSVFIFQWDCWKITLLGDKLSSR 295
           I +FTG+ GIM+RET+ETFGI T+D+KFRVVPKK SVFI Q DCWKITL GDK  SR
Sbjct: 241 IASFTGVQGIMVRETSETFGIITRDDKFRVVPKKLSVFIIQLDCWKITLHGDKFISR 255

The following BLAST results are available for this feature:

BLAST of CmoCh14G001850 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZW76	4.2e-63	47.68	Ribonuclease MRP protein subunit POP4 OS=Arabidopsis thaliana OX=3702 GN=POP4 PE...	[more]
Q5M882	8.3e-19	31.91	Ribonuclease P protein subunit p29 OS=Rattus norvegicus OX=10116 GN=Pop4 PE=2 SV...	[more]
Q2KIB9	1.1e-18	28.66	Ribonuclease P protein subunit p29 OS=Bos taurus OX=9913 GN=POP4 PE=2 SV=1	[more]
O95707	3.2e-18	30.46	Ribonuclease P protein subunit p29 OS=Homo sapiens OX=9606 GN=POP4 PE=1 SV=2	[more]
Q9CR08	7.0e-18	31.21	Ribonuclease P protein subunit p29 OS=Mus musculus OX=10090 GN=Pop4 PE=2 SV=1	[more]

BLAST of CmoCh14G001850 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F2W6	8.6e-168	100.00	ribonuclease P protein subunit p29 OS=Cucurbita moschata OX=3662 GN=LOC111441684...	[more]
A0A6J1J0L0	5.4e-162	96.69	uncharacterized protein LOC111482383 OS=Cucurbita maxima OX=3661 GN=LOC111482383...	[more]
A0A1S3B6Y6	1.7e-136	84.44	uncharacterized protein LOC103486457 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5A7TR23	1.7e-136	84.44	Ribonuclease P protein subunit p29 isoform X1 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A1S3B674	1.7e-136	84.44	Ribonuclease P protein subunit p29 OS=Cucumis melo OX=3656 GN=LOC103486457 PE=3 ...	[more]

BLAST of CmoCh14G001850 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G43190.3	1.8e-64	47.84	ribonuclease P family protein	[more]
AT2G43190.2	1.8e-64	47.84	ribonuclease P family protein	[more]
AT2G43190.1	3.0e-64	47.68	ribonuclease P family protein	[more]
AT2G43190.4	7.7e-52	43.77	ribonuclease P family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 15..35
IPR002730	Ribonuclease P protein subunit Rpp29/RNP1	SMART	SM00538	pop4_2	coord: 215..298 e-value: 1.1E-9 score: 48.1
IPR002730	Ribonuclease P protein subunit Rpp29/RNP1	PFAM	PF01868	UPF0086	coord: 220..294 e-value: 1.6E-18 score: 66.4
IPR036980	Ribonuclease P/MRP subunit Rpp29 superfamily	GENE3D	2.30.30.210	Ribonuclease P/MRP, subunit p29	coord: 215..297 e-value: 4.9E-20 score: 73.0
IPR016848	Ribonuclease P/MRP subunit Rpp29	PANTHER	PTHR13348	RIBONUCLEASE P SUBUNIT P29	coord: 17..296
IPR023534	Rof/RNase P-like	SUPERFAMILY	101744	Rof/RNase P subunit-like	coord: 224..294

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh14G001850.1	CmoCh14G001850.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
biological_process	GO:0006364	rRNA processing
biological_process	GO:0001682	tRNA 5'-leader removal
biological_process	GO:0006396	RNA processing
biological_process	GO:0008033	tRNA processing
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0000172	ribonuclease MRP complex
cellular_component	GO:0030677	ribonuclease P complex
molecular_function	GO:0004526	ribonuclease P activity
molecular_function	GO:0033204	ribonuclease P RNA binding
molecular_function	GO:0003723	RNA binding