CmoCh14G001580 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh14G001580
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionHistone H2B
LocationCmo_Chr14: 693481 .. 693900 (-)
RNA-Seq ExpressionCmoCh14G001580
SyntenyCmoCh14G001580
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGCCAACCAAAGCAGAAAAGAAGCCCGCAGAGAAAAAGCCAGCCGAGAAGACCCCAGCTTCGTCGGAGAAGAAGCTTAAGGCCGAGAAGAAGATCGCTAAAGACGGCGGCGACAAGAAGAAGAAGAAGGTCAAAAAGAGCACCGAAACTTACAAGATCTATATCTTCAAGGTCTTGAAACAGGTTCATCCTGACATTGGGATCTCCAGCAAGGCCATGGGCATTATGAACAGTTTCATCAACGATATCTTTGAAAAACTTGCTCAAGAGGCTTCCAAGTTAGCGAGATATAACAAGAAGCCTACGATCACCTCACGCGAGATCCAGACCGCCGTTCGATTGGTGTTGCCTGGCGAGTTAGCGAAGCATGCCGTATCTGAGGGAACTAAGGCCGTAACCAAATTTACGAGCTCTTAG

mRNA sequence

ATGGCGCCAACCAAAGCAGAAAAGAAGCCCGCAGAGAAAAAGCCAGCCGAGAAGACCCCAGCTTCGTCGGAGAAGAAGCTTAAGGCCGAGAAGAAGATCGCTAAAGACGGCGGCGACAAGAAGAAGAAGAAGGTCAAAAAGAGCACCGAAACTTACAAGATCTATATCTTCAAGGTCTTGAAACAGGTTCATCCTGACATTGGGATCTCCAGCAAGGCCATGGGCATTATGAACAGTTTCATCAACGATATCTTTGAAAAACTTGCTCAAGAGGCTTCCAAGTTAGCGAGATATAACAAGAAGCCTACGATCACCTCACGCGAGATCCAGACCGCCGTTCGATTGGTGTTGCCTGGCGAGTTAGCGAAGCATGCCGTATCTGAGGGAACTAAGGCCGTAACCAAATTTACGAGCTCTTAG

Coding sequence (CDS)

ATGGCGCCAACCAAAGCAGAAAAGAAGCCCGCAGAGAAAAAGCCAGCCGAGAAGACCCCAGCTTCGTCGGAGAAGAAGCTTAAGGCCGAGAAGAAGATCGCTAAAGACGGCGGCGACAAGAAGAAGAAGAAGGTCAAAAAGAGCACCGAAACTTACAAGATCTATATCTTCAAGGTCTTGAAACAGGTTCATCCTGACATTGGGATCTCCAGCAAGGCCATGGGCATTATGAACAGTTTCATCAACGATATCTTTGAAAAACTTGCTCAAGAGGCTTCCAAGTTAGCGAGATATAACAAGAAGCCTACGATCACCTCACGCGAGATCCAGACCGCCGTTCGATTGGTGTTGCCTGGCGAGTTAGCGAAGCATGCCGTATCTGAGGGAACTAAGGCCGTAACCAAATTTACGAGCTCTTAG

Protein sequence

MAPTKAEKKPAEKKPAEKTPASSEKKLKAEKKIAKDGGDKKKKKVKKSTETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Homology
BLAST of CmoCh14G001580 vs. ExPASy Swiss-Prot
Match: Q1SU99 (Probable histone H2B.3 OS=Medicago truncatula OX=3880 PE=3 SV=3)

HSP 1 Score: 219.5 bits (558), Expect = 2.3e-56
Identity = 125/140 (89.29%), Postives = 131/140 (93.57%), Query Frame = 0

Query: 1   MAPTKAEKKPAEKKPAEKTPASSEKKLKAEKKIAKDG-GDKKKKKVKKSTETYKIYIFKV 60
           M PTKAEKKPAEKKPAEK PA  EKK KAEKKI+K+G  DKKKK+ KKS ETYKIYIFKV
Sbjct: 1   MPPTKAEKKPAEKKPAEKAPA--EKKPKAEKKISKEGSSDKKKKRTKKSVETYKIYIFKV 60

Query: 61  LKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPG 120
           LKQVHPDIG+SSKAMGIMNSFINDIFEKLAQE+S+LARYNKKPTITSREIQTAVRLVLPG
Sbjct: 61  LKQVHPDIGVSSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPG 120

Query: 121 ELAKHAVSEGTKAVTKFTSS 140
           ELAKHAVSEGTKAVTKFTSS
Sbjct: 121 ELAKHAVSEGTKAVTKFTSS 138

BLAST of CmoCh14G001580 vs. ExPASy Swiss-Prot
Match: Q9ZUS0 (Histone H2B.4 OS=Arabidopsis thaliana OX=3702 GN=At2g37470 PE=1 SV=3)

HSP 1 Score: 209.9 bits (533), Expect = 1.8e-53
Identity = 122/140 (87.14%), Postives = 126/140 (90.00%), Query Frame = 0

Query: 1   MAPTKAEKKPAEKKPAEKTPASSEKKLKAEKKIAKD--GGDKKKKKVKKSTETYKIYIFK 60
           MAP  AEKKPAEKKPA K PA  EK  KAEKKI+KD  G +KKKKK KKS ETYKIYIFK
Sbjct: 1   MAPKAAEKKPAEKKPAGKAPA--EKLPKAEKKISKDAGGSEKKKKKSKKSVETYKIYIFK 60

Query: 61  VLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLP 120
           VLKQVHPD+GIS KAMGIMNSFINDIFEKLAQE+SKLARYNKKPTITSREIQTAVRLVLP
Sbjct: 61  VLKQVHPDVGISGKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLP 120

Query: 121 GELAKHAVSEGTKAVTKFTS 139
           GELAKHAVSEGTKAVTKFTS
Sbjct: 121 GELAKHAVSEGTKAVTKFTS 138

BLAST of CmoCh14G001580 vs. ExPASy Swiss-Prot
Match: Q9LFF6 (Histone H2B.8 OS=Arabidopsis thaliana OX=3702 GN=At3g53650 PE=1 SV=3)

HSP 1 Score: 208.4 bits (529), Expect = 5.3e-53
Identity = 121/140 (86.43%), Postives = 127/140 (90.71%), Query Frame = 0

Query: 1   MAPTKAEKKPAEKKPAEKTPASSEKKLKAEKKIAKDGG-DKKKKKVKKSTETYKIYIFKV 60
           MAP  AEKKPA KKPAEK PA  EK  KAEKKI K+GG +KKKKK KK+ ETYKIYIFKV
Sbjct: 1   MAPKAAEKKPAGKKPAEKAPA--EKLPKAEKKITKEGGSEKKKKKSKKNIETYKIYIFKV 60

Query: 61  LKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPG 120
           LKQVHPDIGIS KAMGIMNSFINDIFEKLAQE+S+LARYNKKPTITSREIQTAVRLVLPG
Sbjct: 61  LKQVHPDIGISGKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPG 120

Query: 121 ELAKHAVSEGTKAVTKFTSS 140
           EL+KHAVSEGTKAVTKFTSS
Sbjct: 121 ELSKHAVSEGTKAVTKFTSS 138

BLAST of CmoCh14G001580 vs. ExPASy Swiss-Prot
Match: O22582 (Histone H2B OS=Gossypium hirsutum OX=3635 GN=HIS2B PE=2 SV=3)

HSP 1 Score: 208.4 bits (529), Expect = 5.3e-53
Identity = 125/148 (84.46%), Postives = 131/148 (88.51%), Query Frame = 0

Query: 1   MAPTKAEKKPAEKKPAEK-----TPASSEKKLKAEKKIAKDG----GDKKKKKVKKSTET 60
           MAP KAEKKPAEKKPAE+       A +EKK KA KK+ K+G    GDKKKK+VKKS ET
Sbjct: 1   MAP-KAEKKPAEKKPAEEKKAVAEKAPAEKKPKAGKKLPKEGGAAAGDKKKKRVKKSVET 60

Query: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQT 120
           YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEAS+LARYNKKPTITSREIQT
Sbjct: 61  YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQT 120

Query: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 140
           AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 AVRLVLPGELAKHAVSEGTKAVTKFTSS 147

BLAST of CmoCh14G001580 vs. ExPASy Swiss-Prot
Match: Q9SI96 (Histone H2B.3 OS=Arabidopsis thaliana OX=3702 GN=At2g28720 PE=1 SV=3)

HSP 1 Score: 207.6 bits (527), Expect = 9.0e-53
Identity = 126/152 (82.89%), Postives = 131/152 (86.18%), Query Frame = 0

Query: 1   MAPTKAEKKPAEKKPAEKTPAS---------SEKKLKAEKKIAKD----GGDKKKKKVKK 60
           MAP KA KKPAEKKPAEK PA          +EKK KA KK+ K+    G +KKKK+VKK
Sbjct: 1   MAP-KAGKKPAEKKPAEKAPAEEEKVAEKAPAEKKPKAGKKLPKEAVTGGVEKKKKRVKK 60

Query: 61  STETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSR 120
           STETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSR
Sbjct: 61  STETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSR 120

Query: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 140
           EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 151

BLAST of CmoCh14G001580 vs. ExPASy TrEMBL
Match: A0A6J1IZM1 (Histone H2B OS=Cucurbita maxima OX=3661 GN=LOC111481391 PE=3 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 3.4e-63
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0

Query: 1   MAPTKAEKKPAEKKPAEKTPASSEKKLKAEKKIAKDGGDKKKKKVKKSTETYKIYIFKVL 60
           MAPTKAEKKPAEKKPAEKTPASSEKKLKAEKKIAKDGGDKKKKKVKKSTETYKIYIFKVL
Sbjct: 1   MAPTKAEKKPAEKKPAEKTPASSEKKLKAEKKIAKDGGDKKKKKVKKSTETYKIYIFKVL 60

Query: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGE 120
           KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGE
Sbjct: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGE 120

Query: 121 LAKHAVSEGTKAVTKFTSS 140
           LAKHAVSEGTKAVTKFTSS
Sbjct: 121 LAKHAVSEGTKAVTKFTSS 139

BLAST of CmoCh14G001580 vs. ExPASy TrEMBL
Match: A0A6J1F4F8 (Histone H2B OS=Cucurbita moschata OX=3662 GN=LOC111442021 PE=3 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 3.4e-63
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0

Query: 1   MAPTKAEKKPAEKKPAEKTPASSEKKLKAEKKIAKDGGDKKKKKVKKSTETYKIYIFKVL 60
           MAPTKAEKKPAEKKPAEKTPASSEKKLKAEKKIAKDGGDKKKKKVKKSTETYKIYIFKVL
Sbjct: 1   MAPTKAEKKPAEKKPAEKTPASSEKKLKAEKKIAKDGGDKKKKKVKKSTETYKIYIFKVL 60

Query: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGE 120
           KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGE
Sbjct: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGE 120

Query: 121 LAKHAVSEGTKAVTKFTSS 140
           LAKHAVSEGTKAVTKFTSS
Sbjct: 121 LAKHAVSEGTKAVTKFTSS 139

BLAST of CmoCh14G001580 vs. ExPASy TrEMBL
Match: A0A5D3DN75 (Histone H2B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001870 PE=3 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 7.2e-61
Identity = 134/139 (96.40%), Postives = 137/139 (98.56%), Query Frame = 0

Query: 1   MAPTKAEKKPAEKKPAEKTPASSEKKLKAEKKIAKDGGDKKKKKVKKSTETYKIYIFKVL 60
           MAPTKAEKKPAEKKPAEKTP+S+EKK KAEKKIAKD GDKKKKK+KKSTETYKIYIFKVL
Sbjct: 1   MAPTKAEKKPAEKKPAEKTPSSAEKKPKAEKKIAKDSGDKKKKKIKKSTETYKIYIFKVL 60

Query: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGE 120
           KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGE
Sbjct: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGE 120

Query: 121 LAKHAVSEGTKAVTKFTSS 140
           LAKHAVSEGTKAVTKFTSS
Sbjct: 121 LAKHAVSEGTKAVTKFTSS 139

BLAST of CmoCh14G001580 vs. ExPASy TrEMBL
Match: A0A1S3B6N1 (Histone H2B OS=Cucumis melo OX=3656 GN=LOC103486408 PE=3 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 7.2e-61
Identity = 134/139 (96.40%), Postives = 137/139 (98.56%), Query Frame = 0

Query: 1   MAPTKAEKKPAEKKPAEKTPASSEKKLKAEKKIAKDGGDKKKKKVKKSTETYKIYIFKVL 60
           MAPTKAEKKPAEKKPAEKTP+S+EKK KAEKKIAKD GDKKKKK+KKSTETYKIYIFKVL
Sbjct: 1   MAPTKAEKKPAEKKPAEKTPSSAEKKPKAEKKIAKDSGDKKKKKIKKSTETYKIYIFKVL 60

Query: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGE 120
           KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGE
Sbjct: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGE 120

Query: 121 LAKHAVSEGTKAVTKFTSS 140
           LAKHAVSEGTKAVTKFTSS
Sbjct: 121 LAKHAVSEGTKAVTKFTSS 139

BLAST of CmoCh14G001580 vs. ExPASy TrEMBL
Match: A0A6J1KUE6 (Histone H2B OS=Cucurbita maxima OX=3661 GN=LOC111498762 PE=3 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 2.1e-60
Identity = 133/139 (95.68%), Postives = 136/139 (97.84%), Query Frame = 0

Query: 1   MAPTKAEKKPAEKKPAEKTPASSEKKLKAEKKIAKDGGDKKKKKVKKSTETYKIYIFKVL 60
           MAPTKAEKKPAEKKPAEKTP S+EKK KAEKKIAKD GDKKKKK+KKSTETYKIYIFKVL
Sbjct: 1   MAPTKAEKKPAEKKPAEKTPTSAEKKPKAEKKIAKDSGDKKKKKIKKSTETYKIYIFKVL 60

Query: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGE 120
           KQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SKLARYNKKPTITSREIQTAVRLVLPGE
Sbjct: 61  KQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGE 120

Query: 121 LAKHAVSEGTKAVTKFTSS 140
           LAKHAVSEGTKAVTKFTSS
Sbjct: 121 LAKHAVSEGTKAVTKFTSS 139

BLAST of CmoCh14G001580 vs. TAIR 10
Match: AT2G37470.1 (Histone superfamily protein )

HSP 1 Score: 209.9 bits (533), Expect = 1.3e-54
Identity = 122/140 (87.14%), Postives = 126/140 (90.00%), Query Frame = 0

Query: 1   MAPTKAEKKPAEKKPAEKTPASSEKKLKAEKKIAKD--GGDKKKKKVKKSTETYKIYIFK 60
           MAP  AEKKPAEKKPA K PA  EK  KAEKKI+KD  G +KKKKK KKS ETYKIYIFK
Sbjct: 1   MAPKAAEKKPAEKKPAGKAPA--EKLPKAEKKISKDAGGSEKKKKKSKKSVETYKIYIFK 60

Query: 61  VLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLP 120
           VLKQVHPD+GIS KAMGIMNSFINDIFEKLAQE+SKLARYNKKPTITSREIQTAVRLVLP
Sbjct: 61  VLKQVHPDVGISGKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLP 120

Query: 121 GELAKHAVSEGTKAVTKFTS 139
           GELAKHAVSEGTKAVTKFTS
Sbjct: 121 GELAKHAVSEGTKAVTKFTS 138

BLAST of CmoCh14G001580 vs. TAIR 10
Match: AT3G53650.1 (Histone superfamily protein )

HSP 1 Score: 208.4 bits (529), Expect = 3.8e-54
Identity = 121/140 (86.43%), Postives = 127/140 (90.71%), Query Frame = 0

Query: 1   MAPTKAEKKPAEKKPAEKTPASSEKKLKAEKKIAKDGG-DKKKKKVKKSTETYKIYIFKV 60
           MAP  AEKKPA KKPAEK PA  EK  KAEKKI K+GG +KKKKK KK+ ETYKIYIFKV
Sbjct: 1   MAPKAAEKKPAGKKPAEKAPA--EKLPKAEKKITKEGGSEKKKKKSKKNIETYKIYIFKV 60

Query: 61  LKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPG 120
           LKQVHPDIGIS KAMGIMNSFINDIFEKLAQE+S+LARYNKKPTITSREIQTAVRLVLPG
Sbjct: 61  LKQVHPDIGISGKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPG 120

Query: 121 ELAKHAVSEGTKAVTKFTSS 140
           EL+KHAVSEGTKAVTKFTSS
Sbjct: 121 ELSKHAVSEGTKAVTKFTSS 138

BLAST of CmoCh14G001580 vs. TAIR 10
Match: AT2G28720.1 (Histone superfamily protein )

HSP 1 Score: 207.6 bits (527), Expect = 6.4e-54
Identity = 126/152 (82.89%), Postives = 131/152 (86.18%), Query Frame = 0

Query: 1   MAPTKAEKKPAEKKPAEKTPAS---------SEKKLKAEKKIAKD----GGDKKKKKVKK 60
           MAP KA KKPAEKKPAEK PA          +EKK KA KK+ K+    G +KKKK+VKK
Sbjct: 1   MAP-KAGKKPAEKKPAEKAPAEEEKVAEKAPAEKKPKAGKKLPKEAVTGGVEKKKKRVKK 60

Query: 61  STETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSR 120
           STETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSR
Sbjct: 61  STETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSR 120

Query: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 140
           EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 151

BLAST of CmoCh14G001580 vs. TAIR 10
Match: AT5G22880.1 (histone B2 )

HSP 1 Score: 206.1 bits (523), Expect = 1.9e-53
Identity = 120/143 (83.92%), Postives = 128/143 (89.51%), Query Frame = 0

Query: 5   KAEKKPAEKKPAEKTP-----ASSEKKLKAEKKIAKD---GGDKKKKKVKKSTETYKIYI 64
           KA+KKPAEKKPAEKTP     A++EKK KA KK+ K+    GDKKKK+ KK+ ETYKIYI
Sbjct: 3   KADKKPAEKKPAEKTPAAEPAAAAEKKPKAGKKLPKEPAGAGDKKKKRSKKNVETYKIYI 62

Query: 65  FKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLV 124
           FKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA E+SKLARYNKKPTITSREIQTAVRLV
Sbjct: 63  FKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAGESSKLARYNKKPTITSREIQTAVRLV 122

Query: 125 LPGELAKHAVSEGTKAVTKFTSS 140
           LPGELAKHAVSEGTKAVTKFTSS
Sbjct: 123 LPGELAKHAVSEGTKAVTKFTSS 145

BLAST of CmoCh14G001580 vs. TAIR 10
Match: AT5G59910.1 (Histone superfamily protein )

HSP 1 Score: 206.1 bits (523), Expect = 1.9e-53
Identity = 125/151 (82.78%), Postives = 129/151 (85.43%), Query Frame = 0

Query: 1   MAPTKAEKKPAEKKPAEKTP---------ASSEKKLKAEKKIAKD---GGDKKKKKVKKS 60
           MAP KAEKKPAEKKPA + P         A +EKK KA KK+ K+   GGDKKKK  KKS
Sbjct: 1   MAP-KAEKKPAEKKPASEKPVEEKSKAEKAPAEKKPKAGKKLPKEAGAGGDKKKKMKKKS 60

Query: 61  TETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSRE 120
            ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSRE
Sbjct: 61  VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSRE 120

Query: 121 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 140
           IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 150

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q1SU992.3e-5689.29Probable histone H2B.3 OS=Medicago truncatula OX=3880 PE=3 SV=3[more]
Q9ZUS01.8e-5387.14Histone H2B.4 OS=Arabidopsis thaliana OX=3702 GN=At2g37470 PE=1 SV=3[more]
Q9LFF65.3e-5386.43Histone H2B.8 OS=Arabidopsis thaliana OX=3702 GN=At3g53650 PE=1 SV=3[more]
O225825.3e-5384.46Histone H2B OS=Gossypium hirsutum OX=3635 GN=HIS2B PE=2 SV=3[more]
Q9SI969.0e-5382.89Histone H2B.3 OS=Arabidopsis thaliana OX=3702 GN=At2g28720 PE=1 SV=3[more]
Match NameE-valueIdentityDescription
A0A6J1IZM13.4e-63100.00Histone H2B OS=Cucurbita maxima OX=3661 GN=LOC111481391 PE=3 SV=1[more]
A0A6J1F4F83.4e-63100.00Histone H2B OS=Cucurbita moschata OX=3662 GN=LOC111442021 PE=3 SV=1[more]
A0A5D3DN757.2e-6196.40Histone H2B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001870 P... [more]
A0A1S3B6N17.2e-6196.40Histone H2B OS=Cucumis melo OX=3656 GN=LOC103486408 PE=3 SV=1[more]
A0A6J1KUE62.1e-6095.68Histone H2B OS=Cucurbita maxima OX=3661 GN=LOC111498762 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
AT2G37470.11.3e-5487.14Histone superfamily protein [more]
AT3G53650.13.8e-5486.43Histone superfamily protein [more]
AT2G28720.16.4e-5482.89Histone superfamily protein [more]
AT5G22880.11.9e-5383.92histone B2 [more]
AT5G59910.11.9e-5382.78Histone superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000558Histone H2BPRINTSPR00621HISTONEH2Bcoord: 123..136
score: 92.65
coord: 93..110
score: 76.51
coord: 71..91
score: 75.74
coord: 110..123
score: 92.45
coord: 52..70
score: 80.55
IPR000558Histone H2BSMARTSM00427h2b3coord: 42..138
e-value: 2.8E-73
score: 259.5
IPR000558Histone H2BPANTHERPTHR23428HISTONE H2Bcoord: 5..139
IPR000558Histone H2BPROSITEPS00357HISTONE_H2Bcoord: 107..129
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 5..115
e-value: 1.6E-22
score: 80.3
IPR009072Histone-foldGENE3D1.10.20.10Histone, subunit Acoord: 2..139
e-value: 3.7E-60
score: 203.5
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 24..139
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..45
NoneNo IPR availablePANTHERPTHR23428:SF273HISTONE H2B.4coord: 5..139

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh14G001580.1CmoCh14G001580.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006334 nucleosome assembly
cellular_component GO:0000786 nucleosome
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0046982 protein heterodimerization activity