
CmoCh14G001580 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGCCAACCAAAGCAGAAAAGAAGCCCGCAGAGAAAAAGCCAGCCGAGAAGACCCCAGCTTCGTCGGAGAAGAAGCTTAAGGCCGAGAAGAAGATCGCTAAAGACGGCGGCGACAAGAAGAAGAAGAAGGTCAAAAAGAGCACCGAAACTTACAAGATCTATATCTTCAAGGTCTTGAAACAGGTTCATCCTGACATTGGGATCTCCAGCAAGGCCATGGGCATTATGAACAGTTTCATCAACGATATCTTTGAAAAACTTGCTCAAGAGGCTTCCAAGTTAGCGAGATATAACAAGAAGCCTACGATCACCTCACGCGAGATCCAGACCGCCGTTCGATTGGTGTTGCCTGGCGAGTTAGCGAAGCATGCCGTATCTGAGGGAACTAAGGCCGTAACCAAATTTACGAGCTCTTAG ATGGCGCCAACCAAAGCAGAAAAGAAGCCCGCAGAGAAAAAGCCAGCCGAGAAGACCCCAGCTTCGTCGGAGAAGAAGCTTAAGGCCGAGAAGAAGATCGCTAAAGACGGCGGCGACAAGAAGAAGAAGAAGGTCAAAAAGAGCACCGAAACTTACAAGATCTATATCTTCAAGGTCTTGAAACAGGTTCATCCTGACATTGGGATCTCCAGCAAGGCCATGGGCATTATGAACAGTTTCATCAACGATATCTTTGAAAAACTTGCTCAAGAGGCTTCCAAGTTAGCGAGATATAACAAGAAGCCTACGATCACCTCACGCGAGATCCAGACCGCCGTTCGATTGGTGTTGCCTGGCGAGTTAGCGAAGCATGCCGTATCTGAGGGAACTAAGGCCGTAACCAAATTTACGAGCTCTTAG ATGGCGCCAACCAAAGCAGAAAAGAAGCCCGCAGAGAAAAAGCCAGCCGAGAAGACCCCAGCTTCGTCGGAGAAGAAGCTTAAGGCCGAGAAGAAGATCGCTAAAGACGGCGGCGACAAGAAGAAGAAGAAGGTCAAAAAGAGCACCGAAACTTACAAGATCTATATCTTCAAGGTCTTGAAACAGGTTCATCCTGACATTGGGATCTCCAGCAAGGCCATGGGCATTATGAACAGTTTCATCAACGATATCTTTGAAAAACTTGCTCAAGAGGCTTCCAAGTTAGCGAGATATAACAAGAAGCCTACGATCACCTCACGCGAGATCCAGACCGCCGTTCGATTGGTGTTGCCTGGCGAGTTAGCGAAGCATGCCGTATCTGAGGGAACTAAGGCCGTAACCAAATTTACGAGCTCTTAG MAPTKAEKKPAEKKPAEKTPASSEKKLKAEKKIAKDGGDKKKKKVKKSTETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS Homology
BLAST of CmoCh14G001580 vs. ExPASy Swiss-Prot
Match: Q1SU99 (Probable histone H2B.3 OS=Medicago truncatula OX=3880 PE=3 SV=3) HSP 1 Score: 219.5 bits (558), Expect = 2.3e-56 Identity = 125/140 (89.29%), Postives = 131/140 (93.57%), Query Frame = 0
BLAST of CmoCh14G001580 vs. ExPASy Swiss-Prot
Match: Q9ZUS0 (Histone H2B.4 OS=Arabidopsis thaliana OX=3702 GN=At2g37470 PE=1 SV=3) HSP 1 Score: 209.9 bits (533), Expect = 1.8e-53 Identity = 122/140 (87.14%), Postives = 126/140 (90.00%), Query Frame = 0
BLAST of CmoCh14G001580 vs. ExPASy Swiss-Prot
Match: Q9LFF6 (Histone H2B.8 OS=Arabidopsis thaliana OX=3702 GN=At3g53650 PE=1 SV=3) HSP 1 Score: 208.4 bits (529), Expect = 5.3e-53 Identity = 121/140 (86.43%), Postives = 127/140 (90.71%), Query Frame = 0
BLAST of CmoCh14G001580 vs. ExPASy Swiss-Prot
Match: O22582 (Histone H2B OS=Gossypium hirsutum OX=3635 GN=HIS2B PE=2 SV=3) HSP 1 Score: 208.4 bits (529), Expect = 5.3e-53 Identity = 125/148 (84.46%), Postives = 131/148 (88.51%), Query Frame = 0
BLAST of CmoCh14G001580 vs. ExPASy Swiss-Prot
Match: Q9SI96 (Histone H2B.3 OS=Arabidopsis thaliana OX=3702 GN=At2g28720 PE=1 SV=3) HSP 1 Score: 207.6 bits (527), Expect = 9.0e-53 Identity = 126/152 (82.89%), Postives = 131/152 (86.18%), Query Frame = 0
BLAST of CmoCh14G001580 vs. ExPASy TrEMBL
Match: A0A6J1IZM1 (Histone H2B OS=Cucurbita maxima OX=3661 GN=LOC111481391 PE=3 SV=1) HSP 1 Score: 250.8 bits (639), Expect = 3.4e-63 Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0
BLAST of CmoCh14G001580 vs. ExPASy TrEMBL
Match: A0A6J1F4F8 (Histone H2B OS=Cucurbita moschata OX=3662 GN=LOC111442021 PE=3 SV=1) HSP 1 Score: 250.8 bits (639), Expect = 3.4e-63 Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0
BLAST of CmoCh14G001580 vs. ExPASy TrEMBL
Match: A0A5D3DN75 (Histone H2B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001870 PE=3 SV=1) HSP 1 Score: 243.0 bits (619), Expect = 7.2e-61 Identity = 134/139 (96.40%), Postives = 137/139 (98.56%), Query Frame = 0
BLAST of CmoCh14G001580 vs. ExPASy TrEMBL
Match: A0A1S3B6N1 (Histone H2B OS=Cucumis melo OX=3656 GN=LOC103486408 PE=3 SV=1) HSP 1 Score: 243.0 bits (619), Expect = 7.2e-61 Identity = 134/139 (96.40%), Postives = 137/139 (98.56%), Query Frame = 0
BLAST of CmoCh14G001580 vs. ExPASy TrEMBL
Match: A0A6J1KUE6 (Histone H2B OS=Cucurbita maxima OX=3661 GN=LOC111498762 PE=3 SV=1) HSP 1 Score: 241.5 bits (615), Expect = 2.1e-60 Identity = 133/139 (95.68%), Postives = 136/139 (97.84%), Query Frame = 0
BLAST of CmoCh14G001580 vs. TAIR 10
Match: AT2G37470.1 (Histone superfamily protein ) HSP 1 Score: 209.9 bits (533), Expect = 1.3e-54 Identity = 122/140 (87.14%), Postives = 126/140 (90.00%), Query Frame = 0
BLAST of CmoCh14G001580 vs. TAIR 10
Match: AT3G53650.1 (Histone superfamily protein ) HSP 1 Score: 208.4 bits (529), Expect = 3.8e-54 Identity = 121/140 (86.43%), Postives = 127/140 (90.71%), Query Frame = 0
BLAST of CmoCh14G001580 vs. TAIR 10
Match: AT2G28720.1 (Histone superfamily protein ) HSP 1 Score: 207.6 bits (527), Expect = 6.4e-54 Identity = 126/152 (82.89%), Postives = 131/152 (86.18%), Query Frame = 0
BLAST of CmoCh14G001580 vs. TAIR 10
Match: AT5G22880.1 (histone B2 ) HSP 1 Score: 206.1 bits (523), Expect = 1.9e-53 Identity = 120/143 (83.92%), Postives = 128/143 (89.51%), Query Frame = 0
BLAST of CmoCh14G001580 vs. TAIR 10
Match: AT5G59910.1 (Histone superfamily protein ) HSP 1 Score: 206.1 bits (523), Expect = 1.9e-53 Identity = 125/151 (82.78%), Postives = 129/151 (85.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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