
CmoCh14G001560 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATATTCCTTCCGTTCACCAGAAGTTGGCTCTCCTAGACGTAGACGGGTTGGATGATCTGCAATCGTCTTTGAAAGAAATTGATGCTGCATTGTTTAGTGATCTTGATGGATTTTTTAAAAAGTCCTTGAGCATTGAAGATACTCAAAGTTCAGAATGTAAACTCAGTGTGAATTGCTGCTATGATTCAAATGATAGATACAAACAAAAAGGGCTTGAACTTCCCGAGAACAACTCAGCTAATAAGTGTTTAAGCAAATCCAAGTCCTTCCCCATCCCTGCTGTAACATCCCCTCCTAAGGAATCTTCAGACAATGAGAAGAAACCACAAGTAGCGACGGGTGATGTGTCCTGTAATGAGTCTATGCATCAAGCCTTTGCAAGATCCATATCTTTACCTGTAAGTAATCTTCTCTTCAAAACTAAAAAGGGAGAATGTTGCAGTTCTGTCTTGTGTTTATGATTTCTTGTTTTAGTTAAAAGCTACTAATGTTCTAATTATTTTTTTGTCACGAAGGCAAATATGGTGTGGGCATTGAAACTTCTAAGGAACGGCTTTACGAGTTTGGCTGACATGATCCTAGAGATTATGTTACAATTCAATTTTGTTAATATAGATACTGCTTGTCTATTTGTTTCCTTTTTGCGAGTATTTTCTTTTTAAGTATGTCATGTTTTTGTGTTCTTGTGGAGCCCAATCCCGCTGTGGCGGCTGTAAGTATACTTTGCTTGCTATGTTGCATGGCTTTGTGTGTAACACGGAAGAGTGTTCTTAATTTGTTCTGCTGTTTTCTCATTTTAATTTCATTAAGAGTTTTCTGTCAACGTTGTTTGTCGTGAGCAGCATTATCTACATTTTTTGTTTACTCACCCTCTGTGCAGATTTGAGTTTGTTAGTTAAAACAGCACATTATCTGAACTTGCTTGTGGTTTTATACAATTACAAATAATGAATTAGTGAAAAGTGAATGTTAGTGACGCTATTGCACATTTGCGTTTCATCTTATCCCTACTGTTTGCTGACATAACTTCTAATGTCCAGGCTCCTGTGAGGCTCGTATCTGCTATGAAAGGTAGCCGAGTACAACACTATGGGGAGTCACCTAAGATGACTGTGACATGGGCTCCCGACGTGTACGATCCTCCTCAGACATCGTTGTGCCATAGTGTCAAAAACAACAAGAAACAGCAGAAATCTAAGAACAGGAAGAATGGAAAGAAAGGACAGAAGGGCAGCAACTCTTCACGTGGAAGTGGTGGTGGTGGTGGTAGGGACAAAAGGCAGGCTCGTAAAGCCGCTAGTTCTGATCGGTATCAAAAATCATTTAACCCTCACGAAAGTCTGGTTAGTACTCTCAATGAGTATGAGAATTTCGACGATGGTAGCTCAGACTCTCACTGTGGAAGCATCTTCCTGAAGACATCGCTCACCAAGGTGCACTACTCTGTTACTGAAGCCTTGTGAGCGTAGCGTTACTTGTCCAAGTTTCATCTTCTCTCACAGTTTCTGTAAATAAATAAGATGTTTTTGCTTCTTTTGTGATTGTGGATAACCGAGAATCTTGGACCAAAGGATTGTACGACGTTAACTCGTTTGTTGTTTGTTCGAGGATTTATAGACCATTTTGTTATATGATGATTTTGAAATTCGCTTTTTTTTTTATTGAACACTGTTTTTGGATATGGGTGACTACTTGGATGTAGTTATGAATATGGTTGACTGCTTATAGTGAGAGGTTTGTTTGAAAATTTTGTTTTAGAACTTCGTAAATGACTAATTGAATGTAGAAGTTGATGTTAAG ATGGATATTCCTTCCGTTCACCAGAAGTTGGCTCTCCTAGACGTAGACGGGTTGGATGATCTGCAATCGTCTTTGAAAGAAATTGATGCTGCATTGTTTAGTGATCTTGATGGATTTTTTAAAAAGTCCTTGAGCATTGAAGATACTCAAAGTTCAGAATGTAAACTCAGTGTGAATTGCTGCTATGATTCAAATGATAGATACAAACAAAAAGGGCTTGAACTTCCCGAGAACAACTCAGCTAATAAGTGTTTAAGCAAATCCAAGTCCTTCCCCATCCCTGCTGTAACATCCCCTCCTAAGGAATCTTCAGACAATGAGAAGAAACCACAAGTAGCGACGGGTGATGTGTCCTGTAATGAGTCTATGCATCAAGCCTTTGCAAGATCCATATCTTTACCTGCTCCTGTGAGGCTCGTATCTGCTATGAAAGGTAGCCGAGTACAACACTATGGGGAGTCACCTAAGATGACTGTGACATGGGCTCCCGACGTGTACGATCCTCCTCAGACATCGTTGTGCCATAGTGTCAAAAACAACAAGAAACAGCAGAAATCTAAGAACAGGAAGAATGGAAAGAAAGGACAGAAGGGCAGCAACTCTTCACGTGGAAGTGGTGGTGGTGGTGGTAGGGACAAAAGGCAGGCTCGTAAAGCCGCTAGTTCTGATCGGTATCAAAAATCATTTAACCCTCACGAAAGTCTGGTTAGTACTCTCAATGAGTATGAGAATTTCGACGATGGTAGCTCAGACTCTCACTGTGGAAGCATCTTCCTGAAGACATCGCTCACCAAGGTGCACTACTCTGTTACTGAAGCCTTGTGAGCGTAGCGTTACTTGTCCAAGTTTCATCTTCTCTCACAGTTTCTGTAAATAAATAAGATGTTTTTGCTTCTTTTGTGATTGTGGATAACCGAGAATCTTGGACCAAAGGATTGTACGACGTTAACTCGTTTGTTGTTTGTTCGAGGATTTATAGACCATTTTGTTATATGATGATTTTGAAATTCGCTTTTTTTTTTATTGAACACTGTTTTTGGATATGGGTGACTACTTGGATGTAGTTATGAATATGGTTGACTGCTTATAGTGAGAGGTTTGTTTGAAAATTTTGTTTTAGAACTTCGTAAATGACTAATTGAATGTAGAAGTTGATGTTAAG ATGGATATTCCTTCCGTTCACCAGAAGTTGGCTCTCCTAGACGTAGACGGGTTGGATGATCTGCAATCGTCTTTGAAAGAAATTGATGCTGCATTGTTTAGTGATCTTGATGGATTTTTTAAAAAGTCCTTGAGCATTGAAGATACTCAAAGTTCAGAATGTAAACTCAGTGTGAATTGCTGCTATGATTCAAATGATAGATACAAACAAAAAGGGCTTGAACTTCCCGAGAACAACTCAGCTAATAAGTGTTTAAGCAAATCCAAGTCCTTCCCCATCCCTGCTGTAACATCCCCTCCTAAGGAATCTTCAGACAATGAGAAGAAACCACAAGTAGCGACGGGTGATGTGTCCTGTAATGAGTCTATGCATCAAGCCTTTGCAAGATCCATATCTTTACCTGCTCCTGTGAGGCTCGTATCTGCTATGAAAGGTAGCCGAGTACAACACTATGGGGAGTCACCTAAGATGACTGTGACATGGGCTCCCGACGTGTACGATCCTCCTCAGACATCGTTGTGCCATAGTGTCAAAAACAACAAGAAACAGCAGAAATCTAAGAACAGGAAGAATGGAAAGAAAGGACAGAAGGGCAGCAACTCTTCACGTGGAAGTGGTGGTGGTGGTGGTAGGGACAAAAGGCAGGCTCGTAAAGCCGCTAGTTCTGATCGGTATCAAAAATCATTTAACCCTCACGAAAGTCTGGTTAGTACTCTCAATGAGTATGAGAATTTCGACGATGGTAGCTCAGACTCTCACTGTGGAAGCATCTTCCTGAAGACATCGCTCACCAAGGTGCACTACTCTGTTACTGAAGCCTTGTGA MDIPSVHQKLALLDVDGLDDLQSSLKEIDAALFSDLDGFFKKSLSIEDTQSSECKLSVNCCYDSNDRYKQKGLELPENNSANKCLSKSKSFPIPAVTSPPKESSDNEKKPQVATGDVSCNESMHQAFARSISLPAPVRLVSAMKGSRVQHYGESPKMTVTWAPDVYDPPQTSLCHSVKNNKKQQKSKNRKNGKKGQKGSNSSRGSGGGGGRDKRQARKAASSDRYQKSFNPHESLVSTLNEYENFDDGSSDSHCGSIFLKTSLTKVHYSVTEAL Homology
BLAST of CmoCh14G001560 vs. ExPASy TrEMBL
Match: A0A6J1F8B3 (uncharacterized protein LOC111441794 OS=Cucurbita moschata OX=3662 GN=LOC111441794 PE=4 SV=1) HSP 1 Score: 527.7 bits (1358), Expect = 2.9e-146 Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 0
BLAST of CmoCh14G001560 vs. ExPASy TrEMBL
Match: A0A6J1J4W0 (uncharacterized protein LOC111481389 OS=Cucurbita maxima OX=3661 GN=LOC111481389 PE=4 SV=1) HSP 1 Score: 510.4 bits (1313), Expect = 4.7e-141 Identity = 268/275 (97.45%), Postives = 270/275 (98.18%), Query Frame = 0
BLAST of CmoCh14G001560 vs. ExPASy TrEMBL
Match: A0A1S3B607 (uncharacterized protein LOC103486407 OS=Cucumis melo OX=3656 GN=LOC103486407 PE=4 SV=1) HSP 1 Score: 421.8 bits (1083), Expect = 2.2e-114 Identity = 228/276 (82.61%), Postives = 247/276 (89.49%), Query Frame = 0
BLAST of CmoCh14G001560 vs. ExPASy TrEMBL
Match: A0A5D3DN94 (BRI1-KD interacting protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001860 PE=4 SV=1) HSP 1 Score: 404.1 bits (1037), Expect = 4.8e-109 Identity = 219/267 (82.02%), Postives = 238/267 (89.14%), Query Frame = 0
BLAST of CmoCh14G001560 vs. ExPASy TrEMBL
Match: A0A0A0LFL9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G734920 PE=4 SV=1) HSP 1 Score: 403.7 bits (1036), Expect = 6.3e-109 Identity = 222/276 (80.43%), Postives = 243/276 (88.04%), Query Frame = 0
BLAST of CmoCh14G001560 vs. TAIR 10
Match: AT3G53670.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G37480.1); Has 176 Blast hits to 173 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 13; Plants - 154; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). ) HSP 1 Score: 65.9 bits (159), Expect = 5.9e-11 Identity = 61/190 (32.11%), Postives = 95/190 (50.00%), Query Frame = 0
BLAST of CmoCh14G001560 vs. TAIR 10
Match: AT3G53670.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G37480.1). ) HSP 1 Score: 65.9 bits (159), Expect = 5.9e-11 Identity = 61/190 (32.11%), Postives = 95/190 (50.00%), Query Frame = 0
BLAST of CmoCh14G001560 vs. TAIR 10
Match: AT2G37480.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G53670.2); Has 186 Blast hits to 186 proteins in 35 species: Archae - 0; Bacteria - 2; Metazoa - 14; Fungi - 7; Plants - 154; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). ) HSP 1 Score: 61.2 bits (147), Expect = 1.5e-09 Identity = 44/114 (38.60%), Postives = 66/114 (57.89%), Query Frame = 0
BLAST of CmoCh14G001560 vs. TAIR 10
Match: AT2G37480.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G53670.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 60.8 bits (146), Expect = 1.9e-09 Identity = 41/98 (41.84%), Postives = 60/98 (61.22%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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