CmoCh14G001050 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh14G001050
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	protein RETICULATA, chloroplastic-like
Location	Cmo_Chr14: 483952 .. 487698 (-)
RNA-Seq Expression	CmoCh14G001050
Synteny	CmoCh14G001050

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAACCTCACAAATATATATATATATATATTATATATATATGGCTCCGTTGCCATGCGGGGGACCGCTGGTTTGTTGCCACTGCTACTCAACGAACTTATAGCGCCACTGTCGACTTAAAAAGAGAGGCACAGGAAAACCAACATATATGGTATAACCTCTTCATAACTTCTGCCGCTTTGCTCCTCCGCCGCCTCCAATATACCTTATTCCCTGCCTACATCTGCATACCGCCGACTTCCTTAATCGAATTTGTTATCGCTCCCGCAGAGGTATACTCATTCCCCGGCATAACTTATAGATTCTGTATCTTTGTTTTCCTGTTGAAGTTCTTCGCTTGTTAATCGGAAGAACAACGATAATATGACTGTCTAATCCTGCTTTCTACAGCGTGATGCCTAAAACAACTTCTTATGTTGTTGCATGTTGATTACAAGTTTAGGCGCGATTACATTCGTTAATCTGTTTTTTTTTTTTTTTTTTGTTGCCTTGTGGTTTTCTCTGGTGAAGTTGTAAATTTGTCAACAATTCGTAGTTGGATTCTCTACATGGCGGTATTTGGAACATCCTGTTCTGTGGATTTCGGGAATGAAGTAATTTTGGGGAAGATGTGGAGTCGGGGGGTGGCTTTTGGCTGCAGAGCCTTTAGAAATGTGGTGAAGGAGGTTGCTTATCCAGCATCGGCTAGAAAAAGTATTGGCAGATGCATCACTATAAAGAGGAAAAATAAATTCTCGGTAATGATGGATTTTTCTCAGTCGCATTTGGACTCAGACGCTCCTGCAGCTGCTATTCCTGTTTCGAAGGAAGAAGATGAGACCATTAGGGGAAAGGATTTTAGAATTTCGGAGATATCAAAAGTGGACAATGATAACGGTGGTAATGGAAATTATAATAACGGTGAAGGAGGTGGCCGCGGCGGTGGCGGGGGTAATGGCGATGACAATAAGGGAGACAAAGAAGAAGAGGAATTTGGTCCAATTATGAAATTTGATGAGGTGATGAAAGAGGTGGAATCAAGAGGGGTAAGTCTGCCTTCAGATATGTTGGAGGCAGCGAAGAGCAAGGGAATTCGCAAGCTGCTGCTGCTTAGATATTTGGAGATGCAGGTAAGAACTTATCTTCCCTAACATCTTTTGCCACTTCTGCTAAGCAATTTCCTTTTTGGTTATTGAAGGGTTTAGGTTGGCCTCTTGGCTTTTTGATGAAGTCTTGTGCTATGCTTCGAAACCGGATGCTGGCTGATCCATCATTTTTCTTCAAAGTTGGCGTCGAGGTCTATTACCTCATCCTCTTACCATATTTCACTATTTATAGTTTTGACATAACTCCCGATGTCATACACATTTTTTTAAATCACTGATTCAATATTTGCAGTTAGTTATTGATTCTTGCTGCGCTACTTTTGCGGAAGTTCAAAAGAGAGGCAAAGATTTCTGGACAGAATTTGAGCTTTATCTTGCTGATATTTTGGTGGGCGTGGGTGTTAACTTTGCTTTGGTTGCCCTTTTGGCACCTTATGCTCGTTTTGGGCAACCGTCTGTGTCAAAAGGTTTCCTTGGACGCACTCTTCGTGCTTGTGAAGCACTACCAAGCAGGTTTAGAAGCTGAGTTGTGTTGCTTGTAAGTTATCATCATTCCTTATGAAACCAATATGTTTAGAAGCCGTCTTCTTCATGTGTAGTGTTTTTGAAGCTGAACGACCAGGATGTAGATTTTCTGTACAACAAAGAATTCTTACATTTTTCTATAAGGTGAGGGTTATAAGATACTTTTACCCAAACTTATTTTTATCTCTTAGTGTGAGATCCCACATCGGTTGGAGATGAGAATGAAGCATTCCTTGTAAGAGTGTAGAAACTTCTCCCTTGCAAACGTGAGAGGCTGACAACGATATATAACAAGTCAAAGCGGACAATATCTGCTAGCTGTGGGCTAAAACTCTTATACTTGAGAACTTATTTTTATGCTTATTGCTTTAGGGACTCATGTATGGTGCAATAGGATTTGGATGTGGTATAATCGGCCAAGGCATTGCAAATTTAATAATGATCTCAAAAAGGTTATATCTATTCCACGAATTTTGCTCTCGCACATTTCGTTTACAACGTTGATTGTTGTTGTTTCTTTTTTTATGTGATCCTTACCCATTTCTTTTGGCATACATCAGGAGCATAAAGAAATCTGAAGATGAAGTACCAGTTCCACCTCTCTTAAAGAGCGCGGCTCTTTGGGGTACTTCTCGCTTGTTTATATTATTTCAATTTTATTTGATCGATTTTCCCTGGGTCATGTGAATGTTGCTACTTTGCTTATTGCTTTACTCTCACTAGATAATGGCTGTGTATGTCTACAATGAAGTATATGTTGCATGTTTATTATTTGTTTTTCTTGCATTCCAGACATTTGTGATGCTTGTGCTTGCTGCTTCTTTCAGACAGTAGAACTTATCTGATATTCTGATTTGATCAAATGCACTATGCTTGGGTTGATAAGTTTACCACCACACTCGATCAACTTGATCAGGATTTACTTTGTAATTTGTTCATCAATTTCCCAATACAGATAGATTCTATTTACGTTGAGATATCAGTTTGATATGTTGTTGGATTCATGAGCTTGTGAAAGATTAAATGGTTACCTTATTTCACTTGATATACTTACTAAACAGAGAAGTTACTCTCTAGCCTGTGGCATTGTGTGATACCTAGAACAAAAAAATGATCATTCGAAAGATCTCGAGTGCAAGCGAAGACGCTTGGTCCCAAAAGAGGTGGATTTTGAGATCCCACATCAATTAGAGAGGGAAACGAGTGCCAGCGAGGACACTGAGCCCCGAAGGGGGTAGATTGTGAAATCTCACGTCGGTTGGAGAGGGGAACAGTGTGAAAACCTCTCCATACTAGATTTGTTTTAAAACGTTGAGAGGAAGCCCAGAAGGAAAAGAAAGGAAAAGCCTAAAGTGGGCTGTTACACTCTTGCAGTGTTATTTGATTTTCTTTTGCCTGCTAGTTATCCTGTTAAGAACCACTCTATAATGATCAGGCCAATTGCCTTGGGAGTTTTGAGATTGTTTTTCATTTGGAGTTCTCTTCTCTATAACTATGTTTTCTTGTACCCGAACTCTTCATTATTGGTATTTTTTGTTTCTGTTTCTTCTCACTAAAATATGTTTTCTTTGTTACGGCCAAACTTGCAGGAGTTTTTCTTGCAGTATCTTCAAACACGCGTTACCAGATCATCAATGGACTGGAACGCGTAGTGGAATCATCAGCATTAGCAAAGTATATTCCAACAGTTGCTTTGGCTTTCACGGTAGGTATTCGATTTGGCAATAACGTGTACGCTGGAATGCAATTTATCGACTGGGCTAGATGGAGTGGAGTCCAGTAACACCATCTATACAACTTTGAGATATCATTTCTATCTCCTAGGACTCCACAAAAGTGCTCATAGCAAAACAAAAGGTCATCATCCTCTTAACTTAAGCTTCGACATTTACTGTAATATCTAGACAAGGAAAACGGGTCCTTTTGTTGCAATAATAGATTGAAAAGATTCATTTTTGTTACCCGTAAAAGTTATAGGCACCCTTTTATGATATAAAGAAGATATGCCTCATAATTCAATGAAGTTCTGTTCGCCAGAAAAGCACACTAACCTTGCAGGAGAATTGATAATCTGATTGCGAAATCCAGCATTGTTGGAAGGGAAGAGGTAATCTGCAACCCGAGGCCTAGAAAAGGAG

mRNA sequence

TAAACCTCACAAATATATATATATATATATTATATATATATGGCTCCGTTGCCATGCGGGGGACCGCTGGTTTGTTGCCACTGCTACTCAACGAACTTATAGCGCCACTGTCGACTTAAAAAGAGAGGCACAGGAAAACCAACATATATGGTATAACCTCTTCATAACTTCTGCCGCTTTGCTCCTCCGCCGCCTCCAATATACCTTATTCCCTGCCTACATCTGCATACCGCCGACTTCCTTAATCGAATTTGTTATCGCTCCCGCAGAGTTGTAAATTTGTCAACAATTCGTAGTTGGATTCTCTACATGGCGGTATTTGGAACATCCTGTTCTGTGGATTTCGGGAATGAAGTAATTTTGGGGAAGATGTGGAGTCGGGGGGTGGCTTTTGGCTGCAGAGCCTTTAGAAATGTGGTGAAGGAGGTTGCTTATCCAGCATCGGCTAGAAAAAGTATTGGCAGATGCATCACTATAAAGAGGAAAAATAAATTCTCGGTAATGATGGATTTTTCTCAGTCGCATTTGGACTCAGACGCTCCTGCAGCTGCTATTCCTGTTTCGAAGGAAGAAGATGAGACCATTAGGGGAAAGGATTTTAGAATTTCGGAGATATCAAAAGTGGACAATGATAACGGTGGTAATGGAAATTATAATAACGGTGAAGGAGGTGGCCGCGGCGGTGGCGGGGGTAATGGCGATGACAATAAGGGAGACAAAGAAGAAGAGGAATTTGGTCCAATTATGAAATTTGATGAGGTGATGAAAGAGGTGGAATCAAGAGGGGTAAGTCTGCCTTCAGATATGTTGGAGGCAGCGAAGAGCAAGGGAATTCGCAAGCTGCTGCTGCTTAGATATTTGGAGATGCAGGGTTTAGGTTGGCCTCTTGGCTTTTTGATGAAGTCTTGTGCTATGCTTCGAAACCGGATGCTGGCTGATCCATCATTTTTCTTCAAAGTTGGCGTCGAGTTAGTTATTGATTCTTGCTGCGCTACTTTTGCGGAAGTTCAAAAGAGAGGCAAAGATTTCTGGACAGAATTTGAGCTTTATCTTGCTGATATTTTGGTGGGCGTGGGTGTTAACTTTGCTTTGGTTGCCCTTTTGGCACCTTATGCTCGTTTTGGGCAACCGTCTGTGTCAAAAGGTTTCCTTGGACGCACTCTTCGTGCTTGTGAAGCACTACCAAGCAGTGTTTTTGAAGCTGAACGACCAGGATGTAGATTTTCTGTACAACAAAGAATTCTTACATTTTTCTATAAGGGACTCATGTATGGTGCAATAGGATTTGGATGTGGTATAATCGGCCAAGGCATTGCAAATTTAATAATGATCTCAAAAAGGAGCATAAAGAAATCTGAAGATGAAGTACCAGTTCCACCTCTCTTAAAGAGCGCGGCTCTTTGGGGAGTTTTTCTTGCAGTATCTTCAAACACGCGTTACCAGATCATCAATGGACTGGAACGCGTAGTGGAATCATCAGCATTAGCAAAGTATATTCCAACAGTTGCTTTGGCTTTCACGGTAGGTATTCGATTTGGCAATAACGTGTACGCTGGAATGCAATTTATCGACTGGGCTAGATGGAGTGGAGTCCAGTAACACCATCTATACAACTTTGAGATATCATTTCTATCTCCTAGGACTCCACAAAAGTGCTCATAGCAAAACAAAAGGTCATCATCCTCTTAACTTAAGCTTCGACATTTACTGTAATATCTAGACAAGGAAAACGGGTCCTTTTGTTGCAATAATAGATTGAAAAGATTCATTTTTGTTACCCGTAAAAGTTATAGGCACCCTTTTATGATATAAAGAAGATATGCCTCATAATTCAATGAAGTTCTGTTCGCCAGAAAAGCACACTAACCTTGCAGGAGAATTGATAATCTGATTGCGAAATCCAGCATTGTTGGAAGGGAAGAGGTAATCTGCAACCCGAGGCCTAGAAAAGGAG

Coding sequence (CDS)

ATGGCGGTATTTGGAACATCCTGTTCTGTGGATTTCGGGAATGAAGTAATTTTGGGGAAGATGTGGAGTCGGGGGGTGGCTTTTGGCTGCAGAGCCTTTAGAAATGTGGTGAAGGAGGTTGCTTATCCAGCATCGGCTAGAAAAAGTATTGGCAGATGCATCACTATAAAGAGGAAAAATAAATTCTCGGTAATGATGGATTTTTCTCAGTCGCATTTGGACTCAGACGCTCCTGCAGCTGCTATTCCTGTTTCGAAGGAAGAAGATGAGACCATTAGGGGAAAGGATTTTAGAATTTCGGAGATATCAAAAGTGGACAATGATAACGGTGGTAATGGAAATTATAATAACGGTGAAGGAGGTGGCCGCGGCGGTGGCGGGGGTAATGGCGATGACAATAAGGGAGACAAAGAAGAAGAGGAATTTGGTCCAATTATGAAATTTGATGAGGTGATGAAAGAGGTGGAATCAAGAGGGGTAAGTCTGCCTTCAGATATGTTGGAGGCAGCGAAGAGCAAGGGAATTCGCAAGCTGCTGCTGCTTAGATATTTGGAGATGCAGGGTTTAGGTTGGCCTCTTGGCTTTTTGATGAAGTCTTGTGCTATGCTTCGAAACCGGATGCTGGCTGATCCATCATTTTTCTTCAAAGTTGGCGTCGAGTTAGTTATTGATTCTTGCTGCGCTACTTTTGCGGAAGTTCAAAAGAGAGGCAAAGATTTCTGGACAGAATTTGAGCTTTATCTTGCTGATATTTTGGTGGGCGTGGGTGTTAACTTTGCTTTGGTTGCCCTTTTGGCACCTTATGCTCGTTTTGGGCAACCGTCTGTGTCAAAAGGTTTCCTTGGACGCACTCTTCGTGCTTGTGAAGCACTACCAAGCAGTGTTTTTGAAGCTGAACGACCAGGATGTAGATTTTCTGTACAACAAAGAATTCTTACATTTTTCTATAAGGGACTCATGTATGGTGCAATAGGATTTGGATGTGGTATAATCGGCCAAGGCATTGCAAATTTAATAATGATCTCAAAAAGGAGCATAAAGAAATCTGAAGATGAAGTACCAGTTCCACCTCTCTTAAAGAGCGCGGCTCTTTGGGGAGTTTTTCTTGCAGTATCTTCAAACACGCGTTACCAGATCATCAATGGACTGGAACGCGTAGTGGAATCATCAGCATTAGCAAAGTATATTCCAACAGTTGCTTTGGCTTTCACGGTAGGTATTCGATTTGGCAATAACGTGTACGCTGGAATGCAATTTATCGACTGGGCTAGATGGAGTGGAGTCCAGTAA

Protein sequence

MAVFGTSCSVDFGNEVILGKMWSRGVAFGCRAFRNVVKEVAYPASARKSIGRCITIKRKNKFSVMMDFSQSHLDSDAPAAAIPVSKEEDETIRGKDFRISEISKVDNDNGGNGNYNNGEGGGRGGGGGNGDDNKGDKEEEEFGPIMKFDEVMKEVESRGVSLPSDMLEAAKSKGIRKLLLLRYLEMQGLGWPLGFLMKSCAMLRNRMLADPSFFFKVGVELVIDSCCATFAEVQKRGKDFWTEFELYLADILVGVGVNFALVALLAPYARFGQPSVSKGFLGRTLRACEALPSSVFEAERPGCRFSVQQRILTFFYKGLMYGAIGFGCGIIGQGIANLIMISKRSIKKSEDEVPVPPLLKSAALWGVFLAVSSNTRYQIINGLERVVESSALAKYIPTVALAFTVGIRFGNNVYAGMQFIDWARWSGVQ

Homology

[Close]

BLAST of CmoCh14G001050 vs. ExPASy Swiss-Prot
Match: B9DFK5 (Protein RETICULATA, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RE PE=1 SV=1)

HSP 1 Score: 473.4 bits (1217), Expect = 2.7e-132
Identity = 258/434 (59.45%), Postives = 311/434 (71.66%), Query Frame = 0


Query: 5   GTSCSVDFGNEV-ILGKMWSRGVAFGCRAFRNVVKEVAYPA-SARKSIGRCITIKRKNKF 64
           G + ++ F + V +  ++ S G+      FR++ K +  P    R   GR    +R   F
Sbjct: 3   GCAMNLQFSSVVKVRNEISSFGICNRDFVFRDLAKAMKVPVLRIRGGSGR----QRSRLF 62

Query: 65  SVMMDFSQSHLDSDAPAAAIPVSKEEDETIRGKD----FRISEISKVDNDNGGNGNYNNG 124
            V M  S     S   AA   +  E D +I GKD        ++  +D D      +N  
Sbjct: 63  VVNMSQSPIEPQSGGFAATEQIKGEGDNSILGKDNVRNLGTDQLENLDIDGNVGDGFNGS 122

Query: 125 EGGGRGGGGGNGDDNKG---DKEEEEFGPIMKFDEVMKEVESRGVSLPSDMLEAAKSKGI 184
           +G G GGGGGNG +  G   D EE+EFGPI+KF+EVMKE E+RG +LPSDMLEAAK+ GI
Sbjct: 123 DGNGGGGGGGNGGEGDGEGEDYEEKEFGPILKFEEVMKETEARGATLPSDMLEAAKNYGI 182

Query: 185 RKLLLLRYLEMQGLGWPLGFLMKSCAMLRNRMLADPSFFFKVGVELVIDSCCATFAEVQK 244
           RK+LLLRYL++Q     LGF ++S AMLRNRMLADPSF FK+G E+VIDSCCAT AEVQK
Sbjct: 183 RKVLLLRYLDLQSSAGLLGFAIRSWAMLRNRMLADPSFLFKIGAEIVIDSCCATVAEVQK 242

Query: 245 RGKDFWTEFELYLADILVGVGVNFALVALLAPYARFGQPSVSKGFLGRTLRACEALPSSV 304
           RGKDFW EFELY+AD+LVG  VN ALV +LAPY RFGQPS S GFLGR + A  ALPSSV
Sbjct: 243 RGKDFWAEFELYVADLLVGTVVNIALVGMLAPYVRFGQPSASPGFLGRMVFAYNALPSSV 302

Query: 305 FEAERPGCRFSVQQRILTFFYKGLMYGAIGFGCGIIGQGIANLIMISKRSIKKSEDEVPV 364
           FEAERPGCRFS QQR+ T+FYKG+MYGA+GFGCGI+GQGIANLIM +KR+I KSE+ +PV
Sbjct: 303 FEAERPGCRFSAQQRLATYFYKGIMYGAVGFGCGIVGQGIANLIMTAKRNINKSEENIPV 362

Query: 365 PPLLKSAALWGVFLAVSSNTRYQIINGLERVVESSALAKYIPTVALAFTVGIRFGNNVYA 424
           PPL+KSAALWGVFL+VSSNTRYQIINGLERVVE+S  AK  P  A+AFTVG+R  NN+Y 
Sbjct: 363 PPLIKSAALWGVFLSVSSNTRYQIINGLERVVEASPFAKKFPPAAMAFTVGVRLANNIYG 422

Query: 425 GMQFIDWARWSGVQ 430
           GMQF+DWAR SG Q
Sbjct: 423 GMQFVDWARLSGCQ 432

[Close]

BLAST of CmoCh14G001050 vs. ExPASy Swiss-Prot
Match: Q9FGP9 (Protein RETICULATA-RELATED 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RER1 PE=1 SV=1)

HSP 1 Score: 470.3 bits (1209), Expect = 2.3e-131
Identity = 237/325 (72.92%), Postives = 273/325 (84.00%), Query Frame = 0


Query: 106 DNDNGGNGNYNNGEGGGRGGGGGNGDDNKGDKEEEEFGPIMKFDEVMKEVESRGVSLPSD 165
           +ND GGNG   +G GGG  G G +G+D     EE+EFGPI+KF+EVMKE E RG++LP D
Sbjct: 109 NNDGGGNGGNGDGGGGGGDGEGDDGEDEADKAEEKEFGPILKFEEVMKETERRGITLPED 168

Query: 166 MLEAAKSKGIRKLLLLRYLEMQGLGWPLGFLMKSCAMLRNRMLADPSFFFKVGVELVIDS 225
           MLEAAKS GIRKL LLRYL++QG  WPLGFLM+SCAMLRNRMLADPSF FKVG E+ IDS
Sbjct: 169 MLEAAKSVGIRKLFLLRYLDLQGSVWPLGFLMRSCAMLRNRMLADPSFLFKVGTEVAIDS 228

Query: 226 CCATFAEVQKRGKDFWTEFELYLADILVGVGVNFALVALLAPYARFGQPSV-SKGFLGRT 285
           CCATFAEVQKRG+DFW+EFELY AD+LVG+ V+ ALV LLAPYAR G+PSV S G     
Sbjct: 229 CCATFAEVQKRGEDFWSEFELYAADLLVGLVVDVALVGLLAPYARIGKPSVASTGLFKDL 288

Query: 286 LRACEALPSSVFEAERPGCRFSVQQRILTFFYKGLMYGAIGFGCGIIGQGIANLIMISKR 345
            RAC +LPSSVFEAERPGC+FSV QRI TFFYKGL+YG++GFGCG+IGQGIANLIM +KR
Sbjct: 289 KRACASLPSSVFEAERPGCKFSVNQRIATFFYKGLLYGSVGFGCGLIGQGIANLIMTAKR 348

Query: 346 SIKKSEDEVPVPPLLKSAALWGVFLAVSSNTRYQIINGLERVVESSALAKYIPTVALAFT 405
           S+KKSE++VP+PPL +SAALWGVFL +SSN RYQIINGLERVVE S  AK IP VA+AFT
Sbjct: 349 SVKKSEEDVPIPPLFESAALWGVFLGLSSNARYQIINGLERVVEGSTAAKRIPVVAMAFT 408

Query: 406 VGIRFGNNVYAGMQFIDWARWSGVQ 430
           VG+RF NNVY GMQF+DWA+ SGVQ
Sbjct: 409 VGVRFANNVYGGMQFVDWAKLSGVQ 433

[Close]

BLAST of CmoCh14G001050 vs. ExPASy Swiss-Prot
Match: Q94CJ5 (Protein RETICULATA-RELATED 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RER4 PE=2 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 5.3e-27
Identity = 99/331 (29.91%), Postives = 170/331 (51.36%), Query Frame = 0


Query: 109 NGGNGNYNNGEGGGRGGGGGNGDDNKGDKEEEEFGPIMKFDEVMKEVESRGV---SLPSD 168
           +G  G+ NNG G   GGGGG+G  N GD   +E     + +E M  ++  G+   SLP D
Sbjct: 64  SGNGGSDNNGGGLSGGGGGGDGGKNDGDGHGDEDRDRNR-NEAMLLLKESGIELESLPKD 123

Query: 169 MLEAAKSKGIRKLLLLRYLEMQG---LGWPLGFLMKSCAMLRNRMLADPSFFFKVGVELV 228
           +  A ++  I   ++ R+LE+Q    + W + F        R R+LAD  F  K+ +E  
Sbjct: 124 LAAAIEAGRIPGSVITRFLELQKSAVMRWLMQF-----GGFRERLLADDLFMAKLAMECG 183

Query: 229 IDSCCATFAEVQKRGKDFWTEFELYLADILVGVGVNFALVALLAPYARFGQP-SVSKGFL 288
           +     T AE ++R ++F+ E E+  AD+ + +  +F LV L AP      P +++ G +
Sbjct: 184 VGIFTKTAAEYERRRENFFNELEVVFADVAMAIIADFMLVYLPAPTVSLRPPLALTAGGI 243

Query: 289 GRTLRACEALPSSVFEAERPGCRFSVQQRILTFFYKGLMYGAIGFGCGIIGQGIANLIMI 348
            +    C   P + F+    G  +++ QR+      G    A+G    ++G  I N  + 
Sbjct: 244 SKFFHNC---PDNAFQVALSGTSYTLLQRLGAITRNGAKLFAVGTTSSLVGTAITNAFIK 303

Query: 349 SKRSI-KKSEDEVPVPPLLKSAALWGVFLAVSSNTRYQIINGL--ERVVESSALAKYIPT 408
           +++++ + SE EV   P++ ++  +GV++AVSSN RYQI+ G+  +R++E       +  
Sbjct: 304 ARKAVDQNSEGEVETVPIVSTSVAYGVYMAVSSNLRYQIVAGVIEQRLLEPMLHQHKLAL 363

Query: 409 VALAFTVGIRFGNNVYAGMQFIDWARWSGVQ 430
            AL F V  R GN     + ++D+AR  G+Q
Sbjct: 364 SALCFAV--RTGNTFLGSLLWVDYARLIGIQ 383

[Close]

BLAST of CmoCh14G001050 vs. ExPASy Swiss-Prot
Match: Q9C9Z2 (Protein RETICULATA-RELATED 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RER3 PE=1 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 1.4e-19
Identity = 91/323 (28.17%), Postives = 136/323 (42.11%), Query Frame = 0


Query: 110 GGNGNYNNGEGGGRGGGGGNGDDNKGDKEEEEFGPIMKFDEVMKEVESRGVSLPSDMLEA 169
           G  GN   G G G GGGG  G   +  +E   +GPI  F +                   
Sbjct: 66  GSTGNNGGGSGSGGGGGGFGGSGGEASEESSPWGPIGLFIQ------------------- 125

Query: 170 AKSKGIRKLLLLRYLEMQGLGWPLGFLMKSCAMLRNRMLADPSFFFKVGVELVIDSCCAT 229
                               GW            R+R+ ADP F FKV +E ++      
Sbjct: 126 --------------------GW------------RSRVAADPQFPFKVLMEEIVGLSACV 185

Query: 230 FAEVQKRGKDFWTEFELYLADILVGVGVNFALVALLAP-YARFGQPSVSKGFLGRTLRAC 289
             ++  R      E +   + ++VG  +NF L+ +LAP  A  G      G      R C
Sbjct: 186 LGDMASRPNFGLNELDFVFSTLVVGSILNFVLMYMLAPTAATLGSSQTLPGI----FRNC 245

Query: 290 EALPSSVFEAERPGCRFSVQQRILTFFYKGLMYGAIGFGCGIIGQGIAN-LIMISKRSIK 349
            +  S +FE       F+V  R  T  YKG+++ ++G   G++G  I+N LIM+ K+   
Sbjct: 246 PS--SHMFEQG----SFTVMNRFGTLVYKGMVFASVGLAAGLVGTAISNGLIMLRKKMDP 305

Query: 350 KSEDEVPVPPLLKSAALWGVFLAVSSNTRYQIINGLERVVESSALAKYIPTVALAFTV-G 409
             E     PP + ++  W   + VS+N RYQ +NG+E +     LAK +P +    +V  
Sbjct: 306 SFETPNKPPPTVLNSLTWATHMGVSANARYQTLNGIEFL-----LAKVLPPLVFKTSVIV 322

Query: 410 IRFGNNVYAGMQFIDWARWSGVQ 430
           +R  NNV  GM F+  AR +G Q
Sbjct: 366 LRCANNVAGGMSFVLLARMTGSQ 322

[Close]

BLAST of CmoCh14G001050 vs. ExPASy Swiss-Prot
Match: Q9C9Z3 (Protein RETICULATA-RELATED 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RER2 PE=2 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 3.1e-19
Identity = 89/321 (27.73%), Postives = 134/321 (41.74%), Query Frame = 0


Query: 110 GGNGNYNNGEGGGRGGGGGNGDDNKGDKEEEEFGPIMKFDEVMKEVESRGVSLPSDMLEA 169
           GG G+  N  GG   GGGG G     ++E   +GP+  F +                   
Sbjct: 63  GGGGSIGNHGGGSGSGGGGGGYGGSEEEESSPWGPLGLFIQ------------------- 122

Query: 170 AKSKGIRKLLLLRYLEMQGLGWPLGFLMKSCAMLRNRMLADPSFFFKVGVELVIDSCCAT 229
                               GW            R+R+ AD  F FKV +E+++      
Sbjct: 123 --------------------GW------------RSRVAADSQFPFKVLMEMLVGVSANV 182

Query: 230 FAEVQKRGKDFWTEFELYLADILVGVGVNFALVALLAPYARFGQPSVSKGFLGRTLRACE 289
             ++  R      E +   + ++VG  +NF L+ LLAP A       S   L    R+C 
Sbjct: 183 LGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPSA---ISHGSSNLLPGIFRSCP 242

Query: 290 ALPSSVFEAERPGCRFSVQQRILTFFYKGLMYGAIGFGCGIIGQGIAN-LIMISKRSIKK 349
           +  S +FE       F++  R  T  YKG+++  +G   G++G  I+N LIM+ K+    
Sbjct: 243 S--SHMFEQG----NFTLMNRFGTLVYKGMVFATVGLAAGLVGTAISNGLIMLRKKIDPS 302

Query: 350 SEDEVPVPPLLKSAALWGVFLAVSSNTRYQIINGLERVVESSALAKYIPTVALAFTVGIR 409
            E     PP L ++  W   + VS+N RYQ +NG E ++E S      P V     + +R
Sbjct: 303 FETPNKPPPTLLNSLTWATHMGVSANVRYQTLNGAEFLLEKS----LPPLVFKTSVIALR 319

Query: 410 FGNNVYAGMQFIDWARWSGVQ 430
             NNV  GM F+  AR +G Q
Sbjct: 363 VVNNVLGGMSFVTLARMTGSQ 319

[Close]

BLAST of CmoCh14G001050 vs. ExPASy TrEMBL
Match: A0A6J1F8K8 (protein RETICULATA, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111441846 PE=3 SV=1)

HSP 1 Score: 840.9 bits (2171), Expect = 2.4e-240
Identity = 429/429 (100.00%), Postives = 429/429 (100.00%), Query Frame = 0


Query: 1   MAVFGTSCSVDFGNEVILGKMWSRGVAFGCRAFRNVVKEVAYPASARKSIGRCITIKRKN 60
           MAVFGTSCSVDFGNEVILGKMWSRGVAFGCRAFRNVVKEVAYPASARKSIGRCITIKRKN
Sbjct: 1   MAVFGTSCSVDFGNEVILGKMWSRGVAFGCRAFRNVVKEVAYPASARKSIGRCITIKRKN 60

Query: 61  KFSVMMDFSQSHLDSDAPAAAIPVSKEEDETIRGKDFRISEISKVDNDNGGNGNYNNGEG 120
           KFSVMMDFSQSHLDSDAPAAAIPVSKEEDETIRGKDFRISEISKVDNDNGGNGNYNNGEG
Sbjct: 61  KFSVMMDFSQSHLDSDAPAAAIPVSKEEDETIRGKDFRISEISKVDNDNGGNGNYNNGEG 120

Query: 121 GGRGGGGGNGDDNKGDKEEEEFGPIMKFDEVMKEVESRGVSLPSDMLEAAKSKGIRKLLL 180
           GGRGGGGGNGDDNKGDKEEEEFGPIMKFDEVMKEVESRGVSLPSDMLEAAKSKGIRKLLL
Sbjct: 121 GGRGGGGGNGDDNKGDKEEEEFGPIMKFDEVMKEVESRGVSLPSDMLEAAKSKGIRKLLL 180

Query: 181 LRYLEMQGLGWPLGFLMKSCAMLRNRMLADPSFFFKVGVELVIDSCCATFAEVQKRGKDF 240
           LRYLEMQGLGWPLGFLMKSCAMLRNRMLADPSFFFKVGVELVIDSCCATFAEVQKRGKDF
Sbjct: 181 LRYLEMQGLGWPLGFLMKSCAMLRNRMLADPSFFFKVGVELVIDSCCATFAEVQKRGKDF 240

Query: 241 WTEFELYLADILVGVGVNFALVALLAPYARFGQPSVSKGFLGRTLRACEALPSSVFEAER 300
           WTEFELYLADILVGVGVNFALVALLAPYARFGQPSVSKGFLGRTLRACEALPSSVFEAER
Sbjct: 241 WTEFELYLADILVGVGVNFALVALLAPYARFGQPSVSKGFLGRTLRACEALPSSVFEAER 300

Query: 301 PGCRFSVQQRILTFFYKGLMYGAIGFGCGIIGQGIANLIMISKRSIKKSEDEVPVPPLLK 360
           PGCRFSVQQRILTFFYKGLMYGAIGFGCGIIGQGIANLIMISKRSIKKSEDEVPVPPLLK
Sbjct: 301 PGCRFSVQQRILTFFYKGLMYGAIGFGCGIIGQGIANLIMISKRSIKKSEDEVPVPPLLK 360

Query: 361 SAALWGVFLAVSSNTRYQIINGLERVVESSALAKYIPTVALAFTVGIRFGNNVYAGMQFI 420
           SAALWGVFLAVSSNTRYQIINGLERVVESSALAKYIPTVALAFTVGIRFGNNVYAGMQFI
Sbjct: 361 SAALWGVFLAVSSNTRYQIINGLERVVESSALAKYIPTVALAFTVGIRFGNNVYAGMQFI 420

Query: 421 DWARWSGVQ 430
           DWARWSGVQ
Sbjct: 421 DWARWSGVQ 429

[Close]

BLAST of CmoCh14G001050 vs. ExPASy TrEMBL
Match: A0A6J1J3N1 (protein RETICULATA, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111481511 PE=3 SV=1)

HSP 1 Score: 810.4 bits (2092), Expect = 3.5e-231
Identity = 412/429 (96.04%), Postives = 419/429 (97.67%), Query Frame = 0


Query: 1   MAVFGTSCSVDFGNEVILGKMWSRGVAFGCRAFRNVVKEVAYPASARKSIGRCITIKRKN 60
           M +FGTS SVDFGNEVILGKMWSRGV FGCR FRNVVKEVAYPASARKS GRCI IKRKN
Sbjct: 1   MTLFGTSYSVDFGNEVILGKMWSRGVVFGCRTFRNVVKEVAYPASARKSFGRCIAIKRKN 60

Query: 61  KFSVMMDFSQSHLDSDAPAAAIPVSKEEDETIRGKDFRISEISKVDNDNGGNGNYNNGEG 120
           KFSVMMDFSQSHLDSDAPAAAIPVSK+EDET+RGKDFRISEISKV+NDNGGNGNYNNG+G
Sbjct: 61  KFSVMMDFSQSHLDSDAPAAAIPVSKDEDETMRGKDFRISEISKVENDNGGNGNYNNGKG 120

Query: 121 GGRGGGGGNGDDNKGDKEEEEFGPIMKFDEVMKEVESRGVSLPSDMLEAAKSKGIRKLLL 180
           GG GG GG GDDNKGDKEEEEFGPIMKFDEVMKEVESRGVSLPSDMLEAAKS+GIRKLLL
Sbjct: 121 GGGGGSGGTGDDNKGDKEEEEFGPIMKFDEVMKEVESRGVSLPSDMLEAAKSEGIRKLLL 180

Query: 181 LRYLEMQGLGWPLGFLMKSCAMLRNRMLADPSFFFKVGVELVIDSCCATFAEVQKRGKDF 240
           LRYLEMQGLGWPLGFLMKSCAM+RNRMLADPSFFFKVGVELVIDSCCATFAEVQKRGKDF
Sbjct: 181 LRYLEMQGLGWPLGFLMKSCAMIRNRMLADPSFFFKVGVELVIDSCCATFAEVQKRGKDF 240

Query: 241 WTEFELYLADILVGVGVNFALVALLAPYARFGQPSVSKGFLGRTLRACEALPSSVFEAER 300
           WTEFELYLADILVGVGVNFALVALLAPYARFGQPSVSKGFLGRTL ACEALPSSVFEAER
Sbjct: 241 WTEFELYLADILVGVGVNFALVALLAPYARFGQPSVSKGFLGRTLHACEALPSSVFEAER 300

Query: 301 PGCRFSVQQRILTFFYKGLMYGAIGFGCGIIGQGIANLIMISKRSIKKSEDEVPVPPLLK 360
           PGCRFSVQQRILTFFYKGLMYGAIGFGCGIIGQGIANLIMISKRSIKKSEDEVPVPPLLK
Sbjct: 301 PGCRFSVQQRILTFFYKGLMYGAIGFGCGIIGQGIANLIMISKRSIKKSEDEVPVPPLLK 360

Query: 361 SAALWGVFLAVSSNTRYQIINGLERVVESSALAKYIPTVALAFTVGIRFGNNVYAGMQFI 420
           SAALWGVFLAVSSNTRYQIINGLERVVESSALAKYIPTVALAFTVGIRFGNNVYAGMQFI
Sbjct: 361 SAALWGVFLAVSSNTRYQIINGLERVVESSALAKYIPTVALAFTVGIRFGNNVYAGMQFI 420

Query: 421 DWARWSGVQ 430
           DWARWSGVQ
Sbjct: 421 DWARWSGVQ 429

[Close]

BLAST of CmoCh14G001050 vs. ExPASy TrEMBL
Match: A0A5A7TKU7 (Protein RETICULATA OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001340 PE=3 SV=1)

HSP 1 Score: 722.6 bits (1864), Expect = 9.5e-205
Identity = 371/441 (84.13%), Postives = 401/441 (90.93%), Query Frame = 0


Query: 1   MAVFGTSCSVDFGNEVILGK-MWSRGVAFGCRAFRNVVKEVAYPASARKSIGRCITIKRK 60
           MAVFGTSCSV+FGNEV+LGK MWS+GVAFGC +FR+VVKEV YP S RK IGR I +KRK
Sbjct: 1   MAVFGTSCSVEFGNEVVLGKMMWSKGVAFGCGSFRSVVKEVGYPLSDRKGIGRSIAVKRK 60

Query: 61  NKFSVMMDFSQSHLDSDAPAAAIPV--SKEEDETIRGKDFRISEISKVDND--------- 120
           NKFSV+M+FSQSHL+SDAPAAA+ V  SKEE++ IRGKDFR  E+S+VD D         
Sbjct: 61  NKFSVVMNFSQSHLNSDAPAAAVSVTLSKEEEDAIRGKDFRSMEMSEVDKDKHDGELIDG 120

Query: 121 NGGNGNYNNGEGGGRGGGGGNGDDNKGDKEEEEFGPIMKFDEVMKEVESRGVSLPSDMLE 180
           +GGNG YNNG GGG GGGG  GDD++GDKEEEEFGPIMKF+EVMKE+ESRGV+LPSDMLE
Sbjct: 121 DGGNGTYNNGGGGGGGGGGDGGDDSRGDKEEEEFGPIMKFEEVMKELESRGVTLPSDMLE 180

Query: 181 AAKSKGIRKLLLLRYLEMQGLGWPLGFLMKSCAMLRNRMLADPSFFFKVGVELVIDSCCA 240
           AAKS+GIRKLLLLRYLEMQGLGWPLGFLM+SCA++RNR+LADPSFFFKVGVELVIDSCCA
Sbjct: 181 AAKSEGIRKLLLLRYLEMQGLGWPLGFLMRSCALIRNRVLADPSFFFKVGVELVIDSCCA 240

Query: 241 TFAEVQKRGKDFWTEFELYLADILVGVGVNFALVALLAPYARFGQPSVSKGFLGRTLRAC 300
           TFAEVQKRGKDFWTEFELYLADILVGV VNFALVALLAPYARFGQPSVSKGFLGR   AC
Sbjct: 241 TFAEVQKRGKDFWTEFELYLADILVGVAVNFALVALLAPYARFGQPSVSKGFLGRIQHAC 300

Query: 301 EALPSSVFEAERPGCRFSVQQRILTFFYKGLMYGAIGFGCGIIGQGIANLIMISKRSIKK 360
           EALPSSVFEAERPGCRFSVQQRI TFFYKGL+YG +GFGCGIIGQGIANLIM +KRSIKK
Sbjct: 301 EALPSSVFEAERPGCRFSVQQRIATFFYKGLVYGVVGFGCGIIGQGIANLIMTAKRSIKK 360

Query: 361 SEDEVPVPPLLKSAALWGVFLAVSSNTRYQIINGLERVVESSALAKYIPTVALAFTVGIR 420
           SEDEVPVPPL KSAALWGVFLA+SSNTRYQIINGLERVVESS LAK IP VA+AFTVGIR
Sbjct: 361 SEDEVPVPPLFKSAALWGVFLALSSNTRYQIINGLERVVESSPLAKNIPAVAMAFTVGIR 420

Query: 421 FGNNVYAGMQFIDWARWSGVQ 430
           FGNNVYAGMQFIDWARWSGVQ
Sbjct: 421 FGNNVYAGMQFIDWARWSGVQ 441

[Close]

BLAST of CmoCh14G001050 vs. ExPASy TrEMBL
Match: A0A1S3B6H2 (protein RETICULATA, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103486354 PE=3 SV=1)

HSP 1 Score: 722.6 bits (1864), Expect = 9.5e-205
Identity = 371/441 (84.13%), Postives = 401/441 (90.93%), Query Frame = 0


Query: 1   MAVFGTSCSVDFGNEVILGK-MWSRGVAFGCRAFRNVVKEVAYPASARKSIGRCITIKRK 60
           MAVFGTSCSV+FGNEV+LGK MWS+GVAFGC +FR+VVKEV YP S RK IGR I +KRK
Sbjct: 1   MAVFGTSCSVEFGNEVVLGKMMWSKGVAFGCGSFRSVVKEVGYPLSDRKGIGRSIAVKRK 60

Query: 61  NKFSVMMDFSQSHLDSDAPAAAIPV--SKEEDETIRGKDFRISEISKVDND--------- 120
           NKFSV+M+FSQSHL+SDAPAAA+ V  SKEE++ IRGKDFR  E+S+VD D         
Sbjct: 61  NKFSVVMNFSQSHLNSDAPAAAVSVTLSKEEEDAIRGKDFRSMEMSEVDKDKHDGELIDG 120

Query: 121 NGGNGNYNNGEGGGRGGGGGNGDDNKGDKEEEEFGPIMKFDEVMKEVESRGVSLPSDMLE 180
           +GGNG YNNG GGG GGGG  GDD++GDKEEEEFGPIMKF+EVMKE+ESRGV+LPSDMLE
Sbjct: 121 DGGNGTYNNGGGGGGGGGGDGGDDSRGDKEEEEFGPIMKFEEVMKELESRGVTLPSDMLE 180

Query: 181 AAKSKGIRKLLLLRYLEMQGLGWPLGFLMKSCAMLRNRMLADPSFFFKVGVELVIDSCCA 240
           AAKS+GIRKLLLLRYLEMQGLGWPLGFLM+SCA++RNR+LADPSFFFKVGVELVIDSCCA
Sbjct: 181 AAKSEGIRKLLLLRYLEMQGLGWPLGFLMRSCALIRNRVLADPSFFFKVGVELVIDSCCA 240

Query: 241 TFAEVQKRGKDFWTEFELYLADILVGVGVNFALVALLAPYARFGQPSVSKGFLGRTLRAC 300
           TFAEVQKRGKDFWTEFELYLADILVGV VNFALVALLAPYARFGQPSVSKGFLGR   AC
Sbjct: 241 TFAEVQKRGKDFWTEFELYLADILVGVAVNFALVALLAPYARFGQPSVSKGFLGRIQHAC 300

Query: 301 EALPSSVFEAERPGCRFSVQQRILTFFYKGLMYGAIGFGCGIIGQGIANLIMISKRSIKK 360
           EALPSSVFEAERPGCRFSVQQRI TFFYKGL+YG +GFGCGIIGQGIANLIM +KRSIKK
Sbjct: 301 EALPSSVFEAERPGCRFSVQQRIATFFYKGLVYGVVGFGCGIIGQGIANLIMTAKRSIKK 360

Query: 361 SEDEVPVPPLLKSAALWGVFLAVSSNTRYQIINGLERVVESSALAKYIPTVALAFTVGIR 420
           SEDEVPVPPL KSAALWGVFLA+SSNTRYQIINGLERVVESS LAK IP VA+AFTVGIR
Sbjct: 361 SEDEVPVPPLFKSAALWGVFLALSSNTRYQIINGLERVVESSPLAKNIPAVAMAFTVGIR 420

Query: 421 FGNNVYAGMQFIDWARWSGVQ 430
           FGNNVYAGMQFIDWARWSGVQ
Sbjct: 421 FGNNVYAGMQFIDWARWSGVQ 441

[Close]

BLAST of CmoCh14G001050 vs. ExPASy TrEMBL
Match: A0A0A0LFH3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G733360 PE=3 SV=1)

HSP 1 Score: 721.1 bits (1860), Expect = 2.8e-204
Identity = 370/439 (84.28%), Postives = 400/439 (91.12%), Query Frame = 0


Query: 1   MAVFGTSCSVDFGNEVILGKM-WSRGVAFGCRAFRNVVKEVAYPASARKSIGRCITIKRK 60
           MAVFGT  SV+FGNEV+LGKM WS+GVAFGCR+FR+VVKEVAYP S RK IGRCI +KRK
Sbjct: 1   MAVFGTLYSVEFGNEVVLGKMVWSQGVAFGCRSFRSVVKEVAYPISDRKGIGRCIGVKRK 60

Query: 61  NKFSVMMDFSQSHLDSDAPAAAIPVSKEEDETIRGKDFRISEISKVDND---------NG 120
           NKFSV+M FSQSHL+SDAPAAA+ VSKEED+ IRG+DFR  E+S+V +D         NG
Sbjct: 61  NKFSVVMSFSQSHLNSDAPAAAVTVSKEEDDAIRGRDFRSMEMSEVVSDKHDAELIDGNG 120

Query: 121 GNGNYNNGEGGGRGGGGGNGDDNKGDKEEEEFGPIMKFDEVMKEVESRGVSLPSDMLEAA 180
           GNG YNNG GGG G GG  GDD++GD+EEEEFGPIMKF+EVMKE+ESRGV+LPSDMLEAA
Sbjct: 121 GNGAYNNGGGGGGGRGGDGGDDSRGDREEEEFGPIMKFEEVMKELESRGVTLPSDMLEAA 180

Query: 181 KSKGIRKLLLLRYLEMQGLGWPLGFLMKSCAMLRNRMLADPSFFFKVGVELVIDSCCATF 240
           KS+GIRKLLLLRYLEMQGLGWPLGFLM+SCAM+RNR+LADPSFFFKVGVELVIDSCCATF
Sbjct: 181 KSEGIRKLLLLRYLEMQGLGWPLGFLMRSCAMIRNRVLADPSFFFKVGVELVIDSCCATF 240

Query: 241 AEVQKRGKDFWTEFELYLADILVGVGVNFALVALLAPYARFGQPSVSKGFLGRTLRACEA 300
           AEVQKRGKDFWTEFELYLADILVGV VNFALVALLAPYARFGQPSVSKGFLGR   ACEA
Sbjct: 241 AEVQKRGKDFWTEFELYLADILVGVAVNFALVALLAPYARFGQPSVSKGFLGRIQHACEA 300

Query: 301 LPSSVFEAERPGCRFSVQQRILTFFYKGLMYGAIGFGCGIIGQGIANLIMISKRSIKKSE 360
           LPSSVFEAERPGCRFSVQQRI TFFYKGL+YG +GFGCGIIGQGIANLIM +KRSIKKSE
Sbjct: 301 LPSSVFEAERPGCRFSVQQRIATFFYKGLVYGVVGFGCGIIGQGIANLIMTAKRSIKKSE 360

Query: 361 DEVPVPPLLKSAALWGVFLAVSSNTRYQIINGLERVVESSALAKYIPTVALAFTVGIRFG 420
           +EVPVPPL KSAALWGVFLA+SSNTRYQIINGLERVVESS LAK IP VA+AFTVGIRFG
Sbjct: 361 NEVPVPPLFKSAALWGVFLALSSNTRYQIINGLERVVESSPLAKNIPAVAMAFTVGIRFG 420

Query: 421 NNVYAGMQFIDWARWSGVQ 430
           NNVYAGMQFIDWARWSGVQ
Sbjct: 421 NNVYAGMQFIDWARWSGVQ 439

[Close]

BLAST of CmoCh14G001050 vs. TAIR 10
Match: AT2G37860.3 (Protein of unknown function (DUF3411) )

HSP 1 Score: 473.4 bits (1217), Expect = 1.9e-133
Identity = 258/434 (59.45%), Postives = 311/434 (71.66%), Query Frame = 0


Query: 5   GTSCSVDFGNEV-ILGKMWSRGVAFGCRAFRNVVKEVAYPA-SARKSIGRCITIKRKNKF 64
           G + ++ F + V +  ++ S G+      FR++ K +  P    R   GR    +R   F
Sbjct: 3   GCAMNLQFSSVVKVRNEISSFGICNRDFVFRDLAKAMKVPVLRIRGGSGR----QRSRLF 62

Query: 65  SVMMDFSQSHLDSDAPAAAIPVSKEEDETIRGKD----FRISEISKVDNDNGGNGNYNNG 124
            V M  S     S   AA   +  E D +I GKD        ++  +D D      +N  
Sbjct: 63  VVNMSQSPIEPQSGGFAATEQIKGEGDNSILGKDNVRNLGTDQLENLDIDGNVGDGFNGS 122

Query: 125 EGGGRGGGGGNGDDNKG---DKEEEEFGPIMKFDEVMKEVESRGVSLPSDMLEAAKSKGI 184
           +G G GGGGGNG +  G   D EE+EFGPI+KF+EVMKE E+RG +LPSDMLEAAK+ GI
Sbjct: 123 DGNGGGGGGGNGGEGDGEGEDYEEKEFGPILKFEEVMKETEARGATLPSDMLEAAKNYGI 182

Query: 185 RKLLLLRYLEMQGLGWPLGFLMKSCAMLRNRMLADPSFFFKVGVELVIDSCCATFAEVQK 244
           RK+LLLRYL++Q     LGF ++S AMLRNRMLADPSF FK+G E+VIDSCCAT AEVQK
Sbjct: 183 RKVLLLRYLDLQSSAGLLGFAIRSWAMLRNRMLADPSFLFKIGAEIVIDSCCATVAEVQK 242

Query: 245 RGKDFWTEFELYLADILVGVGVNFALVALLAPYARFGQPSVSKGFLGRTLRACEALPSSV 304
           RGKDFW EFELY+AD+LVG  VN ALV +LAPY RFGQPS S GFLGR + A  ALPSSV
Sbjct: 243 RGKDFWAEFELYVADLLVGTVVNIALVGMLAPYVRFGQPSASPGFLGRMVFAYNALPSSV 302

Query: 305 FEAERPGCRFSVQQRILTFFYKGLMYGAIGFGCGIIGQGIANLIMISKRSIKKSEDEVPV 364
           FEAERPGCRFS QQR+ T+FYKG+MYGA+GFGCGI+GQGIANLIM +KR+I KSE+ +PV
Sbjct: 303 FEAERPGCRFSAQQRLATYFYKGIMYGAVGFGCGIVGQGIANLIMTAKRNINKSEENIPV 362

Query: 365 PPLLKSAALWGVFLAVSSNTRYQIINGLERVVESSALAKYIPTVALAFTVGIRFGNNVYA 424
           PPL+KSAALWGVFL+VSSNTRYQIINGLERVVE+S  AK  P  A+AFTVG+R  NN+Y 
Sbjct: 363 PPLIKSAALWGVFLSVSSNTRYQIINGLERVVEASPFAKKFPPAAMAFTVGVRLANNIYG 422

Query: 425 GMQFIDWARWSGVQ 430
           GMQF+DWAR SG Q
Sbjct: 423 GMQFVDWARLSGCQ 432

[Close]

BLAST of CmoCh14G001050 vs. TAIR 10
Match: AT5G22790.1 (reticulata-related 1 )

HSP 1 Score: 470.3 bits (1209), Expect = 1.6e-132
Identity = 237/325 (72.92%), Postives = 273/325 (84.00%), Query Frame = 0


Query: 106 DNDNGGNGNYNNGEGGGRGGGGGNGDDNKGDKEEEEFGPIMKFDEVMKEVESRGVSLPSD 165
           +ND GGNG   +G GGG  G G +G+D     EE+EFGPI+KF+EVMKE E RG++LP D
Sbjct: 109 NNDGGGNGGNGDGGGGGGDGEGDDGEDEADKAEEKEFGPILKFEEVMKETERRGITLPED 168

Query: 166 MLEAAKSKGIRKLLLLRYLEMQGLGWPLGFLMKSCAMLRNRMLADPSFFFKVGVELVIDS 225
           MLEAAKS GIRKL LLRYL++QG  WPLGFLM+SCAMLRNRMLADPSF FKVG E+ IDS
Sbjct: 169 MLEAAKSVGIRKLFLLRYLDLQGSVWPLGFLMRSCAMLRNRMLADPSFLFKVGTEVAIDS 228

Query: 226 CCATFAEVQKRGKDFWTEFELYLADILVGVGVNFALVALLAPYARFGQPSV-SKGFLGRT 285
           CCATFAEVQKRG+DFW+EFELY AD+LVG+ V+ ALV LLAPYAR G+PSV S G     
Sbjct: 229 CCATFAEVQKRGEDFWSEFELYAADLLVGLVVDVALVGLLAPYARIGKPSVASTGLFKDL 288

Query: 286 LRACEALPSSVFEAERPGCRFSVQQRILTFFYKGLMYGAIGFGCGIIGQGIANLIMISKR 345
            RAC +LPSSVFEAERPGC+FSV QRI TFFYKGL+YG++GFGCG+IGQGIANLIM +KR
Sbjct: 289 KRACASLPSSVFEAERPGCKFSVNQRIATFFYKGLLYGSVGFGCGLIGQGIANLIMTAKR 348

Query: 346 SIKKSEDEVPVPPLLKSAALWGVFLAVSSNTRYQIINGLERVVESSALAKYIPTVALAFT 405
           S+KKSE++VP+PPL +SAALWGVFL +SSN RYQIINGLERVVE S  AK IP VA+AFT
Sbjct: 349 SVKKSEEDVPIPPLFESAALWGVFLGLSSNARYQIINGLERVVEGSTAAKRIPVVAMAFT 408

Query: 406 VGIRFGNNVYAGMQFIDWARWSGVQ 430
           VG+RF NNVY GMQF+DWA+ SGVQ
Sbjct: 409 VGVRFANNVYGGMQFVDWAKLSGVQ 433

[Close]

BLAST of CmoCh14G001050 vs. TAIR 10
Match: AT2G37860.2 (Protein of unknown function (DUF3411) )

HSP 1 Score: 342.4 bits (877), Expect = 5.2e-94
Identity = 196/349 (56.16%), Postives = 239/349 (68.48%), Query Frame = 0


Query: 5   GTSCSVDFGNEV-ILGKMWSRGVAFGCRAFRNVVKEVAYPA-SARKSIGRCITIKRKNKF 64
           G + ++ F + V +  ++ S G+      FR++ K +  P    R   GR    +R   F
Sbjct: 3   GCAMNLQFSSVVKVRNEISSFGICNRDFVFRDLAKAMKVPVLRIRGGSGR----QRSRLF 62

Query: 65  SVMMDFSQSHLDSDAPAAAIPVSKEEDETIRGKD----FRISEISKVDNDNGGNGNYNNG 124
            V M  S     S   AA   +  E D +I GKD        ++  +D D      +N  
Sbjct: 63  VVNMSQSPIEPQSGGFAATEQIKGEGDNSILGKDNVRNLGTDQLENLDIDGNVGDGFNGS 122

Query: 125 EGGGRGGGGGNGDDNKG---DKEEEEFGPIMKFDEVMKEVESRGVSLPSDMLEAAKSKGI 184
           +G G GGGGGNG +  G   D EE+EFGPI+KF+EVMKE E+RG +LPSDMLEAAK+ GI
Sbjct: 123 DGNGGGGGGGNGGEGDGEGEDYEEKEFGPILKFEEVMKETEARGATLPSDMLEAAKNYGI 182

Query: 185 RKLLLLRYLEMQGLGWPLGFLMKSCAMLRNRMLADPSFFFKVGVELVIDSCCATFAEVQK 244
           RK+LLLRYL++Q     LGF ++S AMLRNRMLADPSF FK+G E+VIDSCCAT AEVQK
Sbjct: 183 RKVLLLRYLDLQSSAGLLGFAIRSWAMLRNRMLADPSFLFKIGAEIVIDSCCATVAEVQK 242

Query: 245 RGKDFWTEFELYLADILVGVGVNFALVALLAPYARFGQPSVSKGFLGRTLRACEALPSSV 304
           RGKDFW EFELY+AD+LVG  VN ALV +LAPY RFGQPS S GFLGR + A  ALPSSV
Sbjct: 243 RGKDFWAEFELYVADLLVGTVVNIALVGMLAPYVRFGQPSASPGFLGRMVFAYNALPSSV 302

Query: 305 FEAERPGCRFSVQQRILTFFYKGLMYGAIGFGCGIIGQGIANLIMISKR 345
           FEAERPGCRFS QQR+ T+FYKG+MYGA+GFGCGI+GQGIANLIM +KR
Sbjct: 303 FEAERPGCRFSAQQRLATYFYKGIMYGAVGFGCGIVGQGIANLIMTAKR 347

[Close]

BLAST of CmoCh14G001050 vs. TAIR 10
Match: AT2G37860.1 (Protein of unknown function (DUF3411) )

HSP 1 Score: 342.4 bits (877), Expect = 5.2e-94
Identity = 196/349 (56.16%), Postives = 239/349 (68.48%), Query Frame = 0


Query: 5   GTSCSVDFGNEV-ILGKMWSRGVAFGCRAFRNVVKEVAYPA-SARKSIGRCITIKRKNKF 64
           G + ++ F + V +  ++ S G+      FR++ K +  P    R   GR    +R   F
Sbjct: 3   GCAMNLQFSSVVKVRNEISSFGICNRDFVFRDLAKAMKVPVLRIRGGSGR----QRSRLF 62

Query: 65  SVMMDFSQSHLDSDAPAAAIPVSKEEDETIRGKD----FRISEISKVDNDNGGNGNYNNG 124
            V M  S     S   AA   +  E D +I GKD        ++  +D D      +N  
Sbjct: 63  VVNMSQSPIEPQSGGFAATEQIKGEGDNSILGKDNVRNLGTDQLENLDIDGNVGDGFNGS 122

Query: 125 EGGGRGGGGGNGDDNKG---DKEEEEFGPIMKFDEVMKEVESRGVSLPSDMLEAAKSKGI 184
           +G G GGGGGNG +  G   D EE+EFGPI+KF+EVMKE E+RG +LPSDMLEAAK+ GI
Sbjct: 123 DGNGGGGGGGNGGEGDGEGEDYEEKEFGPILKFEEVMKETEARGATLPSDMLEAAKNYGI 182

Query: 185 RKLLLLRYLEMQGLGWPLGFLMKSCAMLRNRMLADPSFFFKVGVELVIDSCCATFAEVQK 244
           RK+LLLRYL++Q     LGF ++S AMLRNRMLADPSF FK+G E+VIDSCCAT AEVQK
Sbjct: 183 RKVLLLRYLDLQSSAGLLGFAIRSWAMLRNRMLADPSFLFKIGAEIVIDSCCATVAEVQK 242

Query: 245 RGKDFWTEFELYLADILVGVGVNFALVALLAPYARFGQPSVSKGFLGRTLRACEALPSSV 304
           RGKDFW EFELY+AD+LVG  VN ALV +LAPY RFGQPS S GFLGR + A  ALPSSV
Sbjct: 243 RGKDFWAEFELYVADLLVGTVVNIALVGMLAPYVRFGQPSASPGFLGRMVFAYNALPSSV 302

Query: 305 FEAERPGCRFSVQQRILTFFYKGLMYGAIGFGCGIIGQGIANLIMISKR 345
           FEAERPGCRFS QQR+ T+FYKG+MYGA+GFGCGI+GQGIANLIM +KR
Sbjct: 303 FEAERPGCRFSAQQRLATYFYKGIMYGAVGFGCGIVGQGIANLIMTAKR 347

[Close]

BLAST of CmoCh14G001050 vs. TAIR 10
Match: AT5G12470.1 (Protein of unknown function (DUF3411) )

HSP 1 Score: 123.6 bits (309), Expect = 3.8e-28
Identity = 99/331 (29.91%), Postives = 170/331 (51.36%), Query Frame = 0


Query: 109 NGGNGNYNNGEGGGRGGGGGNGDDNKGDKEEEEFGPIMKFDEVMKEVESRGV---SLPSD 168
           +G  G+ NNG G   GGGGG+G  N GD   +E     + +E M  ++  G+   SLP D
Sbjct: 64  SGNGGSDNNGGGLSGGGGGGDGGKNDGDGHGDEDRDRNR-NEAMLLLKESGIELESLPKD 123

Query: 169 MLEAAKSKGIRKLLLLRYLEMQG---LGWPLGFLMKSCAMLRNRMLADPSFFFKVGVELV 228
           +  A ++  I   ++ R+LE+Q    + W + F        R R+LAD  F  K+ +E  
Sbjct: 124 LAAAIEAGRIPGSVITRFLELQKSAVMRWLMQF-----GGFRERLLADDLFMAKLAMECG 183

Query: 229 IDSCCATFAEVQKRGKDFWTEFELYLADILVGVGVNFALVALLAPYARFGQP-SVSKGFL 288
           +     T AE ++R ++F+ E E+  AD+ + +  +F LV L AP      P +++ G +
Sbjct: 184 VGIFTKTAAEYERRRENFFNELEVVFADVAMAIIADFMLVYLPAPTVSLRPPLALTAGGI 243

Query: 289 GRTLRACEALPSSVFEAERPGCRFSVQQRILTFFYKGLMYGAIGFGCGIIGQGIANLIMI 348
            +    C   P + F+    G  +++ QR+      G    A+G    ++G  I N  + 
Sbjct: 244 SKFFHNC---PDNAFQVALSGTSYTLLQRLGAITRNGAKLFAVGTTSSLVGTAITNAFIK 303

Query: 349 SKRSI-KKSEDEVPVPPLLKSAALWGVFLAVSSNTRYQIINGL--ERVVESSALAKYIPT 408
           +++++ + SE EV   P++ ++  +GV++AVSSN RYQI+ G+  +R++E       +  
Sbjct: 304 ARKAVDQNSEGEVETVPIVSTSVAYGVYMAVSSNLRYQIVAGVIEQRLLEPMLHQHKLAL 363

Query: 409 VALAFTVGIRFGNNVYAGMQFIDWARWSGVQ 430
            AL F V  R GN     + ++D+AR  G+Q
Sbjct: 364 SALCFAV--RTGNTFLGSLLWVDYARLIGIQ 383

The following BLAST results are available for this feature:

BLAST of CmoCh14G001050 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B9DFK5	2.7e-132	59.45	Protein RETICULATA, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RE PE=1 SV=...	[more]
Q9FGP9	2.3e-131	72.92	Protein RETICULATA-RELATED 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=R...	[more]
Q94CJ5	5.3e-27	29.91	Protein RETICULATA-RELATED 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=R...	[more]
Q9C9Z2	1.4e-19	28.17	Protein RETICULATA-RELATED 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=R...	[more]
Q9C9Z3	3.1e-19	27.73	Protein RETICULATA-RELATED 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=R...	[more]

BLAST of CmoCh14G001050 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F8K8	2.4e-240	100.00	protein RETICULATA, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1J3N1	3.5e-231	96.04	protein RETICULATA, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC1114815...	[more]
A0A5A7TKU7	9.5e-205	84.13	Protein RETICULATA OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G0...	[more]
A0A1S3B6H2	9.5e-205	84.13	protein RETICULATA, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103486354 P...	[more]
A0A0A0LFH3	2.8e-204	84.28	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G733360 PE=3 SV=1	[more]

BLAST of CmoCh14G001050 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37860.3	1.9e-133	59.45	Protein of unknown function (DUF3411)	[more]
AT5G22790.1	1.6e-132	72.92	reticulata-related 1	[more]
AT2G37860.2	5.2e-94	56.16	Protein of unknown function (DUF3411)	[more]
AT2G37860.1	5.2e-94	56.16	Protein of unknown function (DUF3411)	[more]
AT5G12470.1	3.8e-28	29.91	Protein of unknown function (DUF3411)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021825	Protein RETICULATA-related	PFAM	PF11891	RETICULATA-like	coord: 205..383 e-value: 1.2E-63 score: 214.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..143
None	No IPR available	PANTHER	PTHR31038	EXPRESSED PROTEIN-RELATED	coord: 89..429
None	No IPR available	PANTHER	PTHR31038:SF18	PROTEIN RETICULATA-RELATED 1, CHLOROPLASTIC	coord: 89..429

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh14G001050.1	CmoCh14G001050.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0099402	plant organ development
cellular_component	GO:0031969	chloroplast membrane
cellular_component	GO:0016021	integral component of membrane