CmoCh14G000990 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh14G000990
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	17.3 kDa class I heat shock protein-like
Location	Cmo_Chr14: 460488 .. 461081 (+)
RNA-Seq Expression	CmoCh14G000990
Synteny	CmoCh14G000990

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGATCCCTTTCAGAAACTTCTTCCCTAGCGATCGGAAGGAACGCTACTACGTGGAGGAGCGGTCTTCATACGACAACTCCCCTGAGAATCGGAAAGAACGCAACTACGTCCAGGGTCGGCGCTTATTCGACAACTTACATCAGGACCGAAAGGATCGCTACTACGTTGAGGATCGGCCTTCTTACGATCATATCCGTGAGAAAGACGCCGTGGCCGATCCCTTCCGTACTTCCATGGCCTCAAATTCCTCGGCCGTCAACGCTCAGATCGACTGGAAGGAGACTGCGGATGCGCACGTGTTGAGGTTAGAGCTTCCCGGAGTGAAGAAGCAGGCAGTTAAACTGGAGATTGAAGAGAGTGGAGCTATCTGCATCAGCGTCGAAATTAGGGCTGAGAAAGAAGAGACAACCGATATCTGGCGCCGTGTTGAACGAAGCAGTGGAAAGTTCTACCGGCGTATCGTCCTGCCGGACGGCGCTGATGTGGATAAGGTGAAGGCGGAAATGTATAACGGAGTACTAACTGTGACCGTGCCTAAATACCAGTTCAAGAAGCCCATGGCCAGAATGGTCCAGATTTCTGGCCATTAA

mRNA sequence

ATGTCGATCCCTTTCAGAAACTTCTTCCCTAGCGATCGGAAGGAACGCTACTACGTGGAGGAGCGGTCTTCATACGACAACTCCCCTGAGAATCGGAAAGAACGCAACTACGTCCAGGGTCGGCGCTTATTCGACAACTTACATCAGGACCGAAAGGATCGCTACTACGTTGAGGATCGGCCTTCTTACGATCATATCCGTGAGAAAGACGCCGTGGCCGATCCCTTCCGTACTTCCATGGCCTCAAATTCCTCGGCCGTCAACGCTCAGATCGACTGGAAGGAGACTGCGGATGCGCACGTGTTGAGGTTAGAGCTTCCCGGAGTGAAGAAGCAGGCAGTTAAACTGGAGATTGAAGAGAGTGGAGCTATCTGCATCAGCGTCGAAATTAGGGCTGAGAAAGAAGAGACAACCGATATCTGGCGCCGTGTTGAACGAAGCAGTGGAAAGTTCTACCGGCGTATCGTCCTGCCGGACGGCGCTGATGTGGATAAGGTGAAGGCGGAAATGTATAACGGAGTACTAACTGTGACCGTGCCTAAATACCAGTTCAAGAAGCCCATGGCCAGAATGGTCCAGATTTCTGGCCATTAA

Coding sequence (CDS)

ATGTCGATCCCTTTCAGAAACTTCTTCCCTAGCGATCGGAAGGAACGCTACTACGTGGAGGAGCGGTCTTCATACGACAACTCCCCTGAGAATCGGAAAGAACGCAACTACGTCCAGGGTCGGCGCTTATTCGACAACTTACATCAGGACCGAAAGGATCGCTACTACGTTGAGGATCGGCCTTCTTACGATCATATCCGTGAGAAAGACGCCGTGGCCGATCCCTTCCGTACTTCCATGGCCTCAAATTCCTCGGCCGTCAACGCTCAGATCGACTGGAAGGAGACTGCGGATGCGCACGTGTTGAGGTTAGAGCTTCCCGGAGTGAAGAAGCAGGCAGTTAAACTGGAGATTGAAGAGAGTGGAGCTATCTGCATCAGCGTCGAAATTAGGGCTGAGAAAGAAGAGACAACCGATATCTGGCGCCGTGTTGAACGAAGCAGTGGAAAGTTCTACCGGCGTATCGTCCTGCCGGACGGCGCTGATGTGGATAAGGTGAAGGCGGAAATGTATAACGGAGTACTAACTGTGACCGTGCCTAAATACCAGTTCAAGAAGCCCATGGCCAGAATGGTCCAGATTTCTGGCCATTAA

Protein sequence

MSIPFRNFFPSDRKERYYVEERSSYDNSPENRKERNYVQGRRLFDNLHQDRKDRYYVEDRPSYDHIREKDAVADPFRTSMASNSSAVNAQIDWKETADAHVLRLELPGVKKQAVKLEIEESGAICISVEIRAEKEETTDIWRRVERSSGKFYRRIVLPDGADVDKVKAEMYNGVLTVTVPKYQFKKPMARMVQISGH

Homology

[Close]

BLAST of CmoCh14G000990 vs. ExPASy Swiss-Prot
Match: P30221 (17.8 kDa class I heat shock protein OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 8.1e-31
Identity = 68/131 (51.91%), Postives = 90/131 (68.70%), Query Frame = 0


Query: 72  VADPFR------TSMASNSSAVNAQIDWKETADAHVLRLELPGVKKQAVKLEIEESGAIC 131
           V DPFR      T+   +S+  N +IDWKET + HV +++LPG+KK+ VK+E+EE   + 
Sbjct: 24  VFDPFRELGFPSTNSGESSAFANTRIDWKETPEPHVFKVDLPGLKKEEVKVEVEEDRVLQ 83

Query: 132 ISVEIRAEKEETTDIWRRVERSSGKFYRRIVLPDGADVDKVKAEMYNGVLTVTVPKYQFK 191
           IS E   EKE+  D W R+ERSSGKF RR  LP+ A +D+VKA M NGVLTVTVPK + K
Sbjct: 84  ISGERNVEKEDKNDKWHRMERSSGKFMRRFRLPENAKMDQVKASMENGVLTVTVPKEEVK 143

Query: 192 KPMARMVQISG 197
           KP  + ++ISG
Sbjct: 144 KPEVKSIEISG 154

[Close]

BLAST of CmoCh14G000990 vs. ExPASy Swiss-Prot
Match: O82011 (17.7 kDa class I heat shock protein OS=Solanum peruvianum OX=4082 PE=2 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.4e-30
Identity = 69/131 (52.67%), Postives = 89/131 (67.94%), Query Frame = 0


Query: 72  VADPFR------TSMASNSSAVNAQIDWKETADAHVLRLELPGVKKQAVKLEIEESGAIC 131
           V DPFR      T+    S+  N +IDWKET +AHV + +LPG+K + VK+E+EE   + 
Sbjct: 24  VFDPFRELGFPGTNSGETSAFANTRIDWKETPEAHVFKADLPGLKLEEVKVEVEEDRVLQ 83

Query: 132 ISVEIRAEKEETTDIWRRVERSSGKFYRRIVLPDGADVDKVKAEMYNGVLTVTVPKYQFK 191
           IS E   EKE+  D W+RVERSSGKF RR  LP+ A +D+VKA M NGVLTVTVPK + K
Sbjct: 84  ISGERNMEKEDKNDKWQRVERSSGKFMRRFRLPENAKMDQVKASMENGVLTVTVPKEEMK 143

Query: 192 KPMARMVQISG 197
           KP  + ++ISG
Sbjct: 144 KPDVKSIEISG 154

[Close]

BLAST of CmoCh14G000990 vs. ExPASy Swiss-Prot
Match: P02519 (17.3 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.3-B PE=3 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.4e-30
Identity = 67/123 (54.47%), Postives = 88/123 (71.54%), Query Frame = 0


Query: 75  PFRTSM-ASNSSAVNAQIDWKETADAHVLRLELPGVKKQAVKLEIEESGAICISVEIRAE 134
           PF +S+ A NS+ V+ ++DWKET +AHV + ++PG+KK+ VKLEI++   + IS E   E
Sbjct: 31  PFPSSLSAENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKLEIQDGRVLQISGERNVE 90

Query: 135 KEETTDIWRRVERSSGKFYRRIVLPDGADVDKVKAEMYNGVLTVTVPKYQFKKPMARMVQ 194
           KE+  D W RVERSSGK  RR  LP+ A VD+VKA M NGVLTVTVPK + KKP  + + 
Sbjct: 91  KEDKNDTWHRVERSSGKLVRRFRLPENAKVDQVKASMENGVLTVTVPKEEIKKPDVKAID 150

Query: 195 ISG 197
           ISG
Sbjct: 151 ISG 153

[Close]

BLAST of CmoCh14G000990 vs. ExPASy Swiss-Prot
Match: Q9ZW31 (17.6 kDa class I heat shock protein 2 OS=Arabidopsis thaliana OX=3702 GN=HSP17.6B PE=2 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.8e-30
Identity = 69/130 (53.08%), Postives = 90/130 (69.23%), Query Frame = 0


Query: 72  VADPFRTSMAS-----NSSAVNAQIDWKETADAHVLRLELPGVKKQAVKLEIEESGAICI 131
           V DPF+   +S     NS+ VNA++DW+ET +AHV + +LPG+KK+ VK+EIEE   + I
Sbjct: 24  VWDPFKELTSSSLSRENSAIVNARVDWRETPEAHVFKADLPGLKKEEVKVEIEEDSVLKI 83

Query: 132 SVEIRAEKEETTDIWRRVERSSGKFYRRIVLPDGADVDKVKAEMYNGVLTVTVPKYQFKK 191
           S E   EKE+  D W RVERSSG+F RR  LP+   +D+VKA M NGVLTVTVPK + KK
Sbjct: 84  SGERHVEKEDKNDTWHRVERSSGQFTRRFRLPENVKMDQVKAAMENGVLTVTVPKAETKK 143

Query: 192 PMARMVQISG 197
              + +QISG
Sbjct: 144 ADVKSIQISG 153

[Close]

BLAST of CmoCh14G000990 vs. ExPASy Swiss-Prot
Match: P27396 (17.8 kDa class I heat shock protein OS=Daucus carota OX=4039 PE=3 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 3.1e-30
Identity = 73/135 (54.07%), Postives = 89/135 (65.93%), Query Frame = 0


Query: 72  VADPFR-----TSMAS-----NSSAVNAQIDWKETADAHVLRLELPGVKKQAVKLEIEES 131
           V DPF+     TS AS      ++ VN  IDWKET  AHV + +LPG+KK+ VK+E+EE 
Sbjct: 23  VWDPFKDFPLVTSSASEFGKETAAFVNTHIDWKETPQAHVFKADLPGLKKEEVKVELEEG 82

Query: 132 GAICISVEIRAEKEETTDIWRRVERSSGKFYRRIVLPDGADVDKVKAEMYNGVLTVTVPK 191
             + IS E   EKEE  D W RVERSSGKF RR  LP+ A VD+VKA M NGV+TVTVPK
Sbjct: 83  KVLQISGERNKEKEEKNDKWHRVERSSGKFLRRFRLPENAKVDEVKAAMANGVVTVTVPK 142

Query: 192 YQFKKPMARMVQISG 197
            + KKP  + + ISG
Sbjct: 143 VEIKKPEVKAIDISG 157

[Close]

BLAST of CmoCh14G000990 vs. ExPASy TrEMBL
Match: A0A6J1F916 (18.1 kDa class I heat shock protein-like OS=Cucurbita moschata OX=3662 GN=LOC111441940 PE=3 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 5.1e-105
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0


Query: 1   MSIPFRNFFPSDRKERYYVEERSSYDNSPENRKERNYVQGRRLFDNLHQDRKDRYYVEDR 60
           MSIPFRNFFPSDRKERYYVEERSSYDNSPENRKERNYVQGRRLFDNLHQDRKDRYYVEDR
Sbjct: 1   MSIPFRNFFPSDRKERYYVEERSSYDNSPENRKERNYVQGRRLFDNLHQDRKDRYYVEDR 60

Query: 61  PSYDHIREKDAVADPFRTSMASNSSAVNAQIDWKETADAHVLRLELPGVKKQAVKLEIEE 120
           PSYDHIREKDAVADPFRTSMASNSSAVNAQIDWKETADAHVLRLELPGVKKQAVKLEIEE
Sbjct: 61  PSYDHIREKDAVADPFRTSMASNSSAVNAQIDWKETADAHVLRLELPGVKKQAVKLEIEE 120

Query: 121 SGAICISVEIRAEKEETTDIWRRVERSSGKFYRRIVLPDGADVDKVKAEMYNGVLTVTVP 180
           SGAICISVEIRAEKEETTDIWRRVERSSGKFYRRIVLPDGADVDKVKAEMYNGVLTVTVP
Sbjct: 121 SGAICISVEIRAEKEETTDIWRRVERSSGKFYRRIVLPDGADVDKVKAEMYNGVLTVTVP 180

Query: 181 KYQFKKPMARMVQISGH 198
           KYQFKKPMARMVQISGH
Sbjct: 181 KYQFKKPMARMVQISGH 197

[Close]

BLAST of CmoCh14G000990 vs. ExPASy TrEMBL
Match: A0A6J1FM77 (18.1 kDa class I heat shock protein-like OS=Cucurbita moschata OX=3662 GN=LOC111447079 PE=3 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 5.2e-73
Identity = 142/197 (72.08%), Postives = 169/197 (85.79%), Query Frame = 0


Query: 1   MSIPFRNFFPSDRKERYYVEERSSYDNSPENRKERNYVQGRRLFDNLHQDRKDRYYVEDR 60
           MSI F +FFP+DRKERYYVE+R S   S E+ K R YV+ RR FD   +++K+RYY++DR
Sbjct: 1   MSIRFNDFFPTDRKERYYVEDRPSGGKSAEDWKGRYYVEDRRSFDKFPEEQKERYYIKDR 60

Query: 61  PSYDHIREKDAVADPFRTSMASNSSAVNAQIDWKETADAHVLRLELPGVKKQAVKLEIEE 120
            SYD   EKDA+A PFRTSMASNSSA+NAQ+D+KETADAHVLRLELPG+KK  VKLEIE+
Sbjct: 61  NSYDQFHEKDALAGPFRTSMASNSSAMNAQVDFKETADAHVLRLELPGMKKHEVKLEIED 120

Query: 121 SGAICISVEIRAEKEETTDIWRRVERSSGKFYRRIVLPDGADVDKVKAEMYNGVLTVTVP 180
           +G +CIS EIRAEKEE +DIWRRVERSSG+FYRR+VLP+ ADVDKVKAEM NG+LTVTVP
Sbjct: 121 NGGLCISTEIRAEKEEISDIWRRVERSSGRFYRRVVLPESADVDKVKAEMNNGILTVTVP 180

Query: 181 KYQFKKPMARMVQISGH 198
           K+ FKKP+AR+VQISGH
Sbjct: 181 KHHFKKPIARIVQISGH 197

[Close]

BLAST of CmoCh14G000990 vs. ExPASy TrEMBL
Match: A0A6J1I321 (17.3 kDa class I heat shock protein-like OS=Cucurbita maxima OX=3661 GN=LOC111470089 PE=3 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 1.2e-72
Identity = 143/197 (72.59%), Postives = 167/197 (84.77%), Query Frame = 0


Query: 1   MSIPFRNFFPSDRKERYYVEERSSYDNSPENRKERNYVQGRRLFDNLHQDRKDRYYVEDR 60
           MSI F NFFP+DRKERY VE+R S   SPE+ K R YV+ RR FD   +++K+RYY++DR
Sbjct: 1   MSIRFNNFFPTDRKERYCVEDRPSGGKSPEDWKGRYYVEDRRSFDKFPEEQKERYYIKDR 60

Query: 61  PSYDHIREKDAVADPFRTSMASNSSAVNAQIDWKETADAHVLRLELPGVKKQAVKLEIEE 120
            SYD   EKDA+A PFRTSMASNSSA+NAQ D+KETADAHVLRLELPGVKK  VKLEIE+
Sbjct: 61  NSYDQFHEKDALARPFRTSMASNSSAMNAQFDFKETADAHVLRLELPGVKKHEVKLEIED 120

Query: 121 SGAICISVEIRAEKEETTDIWRRVERSSGKFYRRIVLPDGADVDKVKAEMYNGVLTVTVP 180
           +G +CIS EIRAEKEE +DIWRRVERSSG+ YRR+VLP+ ADVDKVKAEM NG+LTVTVP
Sbjct: 121 NGGLCISTEIRAEKEEISDIWRRVERSSGRLYRRVVLPESADVDKVKAEMNNGILTVTVP 180

Query: 181 KYQFKKPMARMVQISGH 198
           K+ FKKP+AR+VQISGH
Sbjct: 181 KHHFKKPIARIVQISGH 197

[Close]

BLAST of CmoCh14G000990 vs. ExPASy TrEMBL
Match: H6TB36 (HSP22.8 OS=Citrullus lanatus OX=3654 PE=2 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 6.3e-71
Identity = 143/198 (72.22%), Postives = 161/198 (81.31%), Query Frame = 0


Query: 1   MSIPFRNFFPSDRKERYYVEERSSYDNSPENRKERNYVQGRRLFDNLHQDRKDRYYVEDR 60
           MS+ F NFFP+DRKERYYVE+R      PE+RKE  + + RR+FD    DRK+RYYVEDR
Sbjct: 1   MSLRFSNFFPTDRKERYYVEDRPGCQKCPEDRKEHYHGEDRRVFDKFVDDRKERYYVEDR 60

Query: 61  PSYDHIREKDAV-ADPFRTSMASNSSAVNAQIDWKETADAHVLRLELPGVKKQAVKLEIE 120
            SY    EKD + ADPFR     NSSAVNAQIDWKETADAHV +L+LPGVKK  VKLEIE
Sbjct: 61  HSYGQFHEKDVIAADPFR-----NSSAVNAQIDWKETADAHVFKLDLPGVKKHEVKLEIE 120

Query: 121 ESGAICISVEIRAEKEETTDIWRRVERSSGKFYRRIVLPDGADVDKVKAEMYNGVLTVTV 180
           ESG +CIS EIRAE+EE TDIWRRVERSSG+FYRRIVLP+GADVDKV+AEM NGVLTVTV
Sbjct: 121 ESGVLCISTEIRAEREERTDIWRRVERSSGRFYRRIVLPEGADVDKVRAEMSNGVLTVTV 180

Query: 181 PKYQFKKPMARMVQISGH 198
           PKY FKKP AR+VQI+GH
Sbjct: 181 PKYHFKKPTARVVQIAGH 193

[Close]

BLAST of CmoCh14G000990 vs. ExPASy TrEMBL
Match: A0A0A0LDJ8 (SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G733220 PE=3 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 3.9e-68
Identity = 137/193 (70.98%), Postives = 162/193 (83.94%), Query Frame = 0


Query: 7   NFFPSDRKERYYVEERSSYDNSP-ENRKERNYVQGRRLFDNLHQDRKDRYYVEDRPSYDH 66
           +FFP++RKE+YYVE+RS  +  P E+RKER   + RR+FD    DRK+RYYVE+R SY  
Sbjct: 8   SFFPTNRKEQYYVEDRSGCEKCPTEDRKERYQGEDRRMFDKFFDDRKERYYVENRHSYRQ 67

Query: 67  IREKDAV-ADPFRTSMASNSSAVNAQIDWKETADAHVLRLELPGVKKQAVKLEIEESGAI 126
             EKD V AD FR+S+A NSSA+NAQIDWKET DA+V +L+LPGVKK  VKLEIEE+GA+
Sbjct: 68  FPEKDVVSADSFRSSVAPNSSAINAQIDWKETGDAYVFKLDLPGVKKHEVKLEIEENGAL 127

Query: 127 CISVEIRAEKEETTDIWRRVERSSGKFYRRIVLPDGADVDKVKAEMYNGVLTVTVPKYQF 186
           CIS EIRAE+EE TDIW R+ERSSG+ YRRIVLPDGADVDKV+AEMYNGVL VTVPKYQF
Sbjct: 128 CISTEIRAEREERTDIWHRMERSSGRIYRRIVLPDGADVDKVRAEMYNGVLNVTVPKYQF 187

Query: 187 KKPMARMVQISGH 198
           +KPMAR+VQISGH
Sbjct: 188 RKPMARVVQISGH 200

[Close]

BLAST of CmoCh14G000990 vs. TAIR 10
Match: AT2G29500.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 134.0 bits (336), Expect = 1.3e-31
Identity = 69/130 (53.08%), Postives = 90/130 (69.23%), Query Frame = 0


Query: 72  VADPFRTSMAS-----NSSAVNAQIDWKETADAHVLRLELPGVKKQAVKLEIEESGAICI 131
           V DPF+   +S     NS+ VNA++DW+ET +AHV + +LPG+KK+ VK+EIEE   + I
Sbjct: 24  VWDPFKELTSSSLSRENSAIVNARVDWRETPEAHVFKADLPGLKKEEVKVEIEEDSVLKI 83

Query: 132 SVEIRAEKEETTDIWRRVERSSGKFYRRIVLPDGADVDKVKAEMYNGVLTVTVPKYQFKK 191
           S E   EKE+  D W RVERSSG+F RR  LP+   +D+VKA M NGVLTVTVPK + KK
Sbjct: 84  SGERHVEKEDKNDTWHRVERSSGQFTRRFRLPENVKMDQVKAAMENGVLTVTVPKAETKK 143

Query: 192 PMARMVQISG 197
              + +QISG
Sbjct: 144 ADVKSIQISG 153

[Close]

BLAST of CmoCh14G000990 vs. TAIR 10
Match: AT1G07400.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 127.9 bits (320), Expect = 9.2e-30
Identity = 68/133 (51.13%), Postives = 92/133 (69.17%), Query Frame = 0


Query: 72  VADPFR-----TSMASNSSAV-NAQIDWKETADAHVLRLELPGVKKQAVKLEIEESGAIC 131
           V DPF+     +S++  +SA+ NA++DWKETA+AHV + +LPG+KK+ VK+EIE+   + 
Sbjct: 25  VWDPFKELQFPSSLSGETSAITNARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLK 84

Query: 132 ISVEIRAEKEETTDIWRRVERSSGKFYRRIVLPDGADVDKVKAEMYNGVLTVTVPKYQ-- 191
           IS E   EKEE  D W RVERSSG+F R+  LP+   +D+VKA M NGVLTVTVPK +  
Sbjct: 85  ISGERHVEKEEKQDTWHRVERSSGQFSRKFKLPENVKMDQVKASMENGVLTVTVPKVEEA 144

Query: 192 FKKPMARMVQISG 197
            KK   + + ISG
Sbjct: 145 KKKAQVKSIDISG 157

[Close]

BLAST of CmoCh14G000990 vs. TAIR 10
Match: AT1G59860.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 127.1 bits (318), Expect = 1.6e-29
Identity = 67/130 (51.54%), Postives = 88/130 (67.69%), Query Frame = 0


Query: 72  VADPFRT---SMASNSSAVNAQIDWKETADAHVLRLELPGVKKQAVKLEIEESGAICISV 131
           V DPF+      +S+S+  NA++DWKETA+AHV + +LPG+KK+ VK+EIE+   + IS 
Sbjct: 26  VWDPFKELQFPSSSSSAIANARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISG 85

Query: 132 EIRAEKEETTDIWRRVERSSGKFYRRIVLPDGADVDKVKAEMYNGVLTVTVPKYQF--KK 191
           E   EKEE  D W RVERSSG F R+  LP+   +D+VKA M NGVLTVTVPK +   KK
Sbjct: 86  ERHVEKEEKQDTWHRVERSSGGFSRKFRLPENVKMDQVKASMENGVLTVTVPKVETNKKK 145

Query: 192 PMARMVQISG 197
              + + ISG
Sbjct: 146 AQVKSIDISG 155

[Close]

BLAST of CmoCh14G000990 vs. TAIR 10
Match: AT3G46230.1 (heat shock protein 17.4 )

HSP 1 Score: 125.9 bits (315), Expect = 3.5e-29
Identity = 60/109 (55.05%), Postives = 80/109 (73.39%), Query Frame = 0


Query: 88  NAQIDWKETADAHVLRLELPGVKKQAVKLEIEESGAICISVEIRAEKEETTDIWRRVERS 147
           NA++DW+ET +AHV + ++PG+KK+ VK+E+E+   + IS E  +E EE +D W RVERS
Sbjct: 48  NAKVDWRETPEAHVFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERS 107

Query: 148 SGKFYRRIVLPDGADVDKVKAEMYNGVLTVTVPKYQFKKPMARMVQISG 197
           SGKF RR  LP+ A V++VKA M NGVL+VTVPK Q  KP  + V ISG
Sbjct: 108 SGKFMRRFRLPENAKVEEVKASMENGVLSVTVPKVQESKPEVKSVDISG 156

[Close]

BLAST of CmoCh14G000990 vs. TAIR 10
Match: AT1G53540.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 120.9 bits (302), Expect = 1.1e-27
Identity = 57/109 (52.29%), Postives = 78/109 (71.56%), Query Frame = 0


Query: 88  NAQIDWKETADAHVLRLELPGVKKQAVKLEIEESGAICISVEIRAEKEETTDIWRRVERS 147
           NA++DW+ET +AHV + +LPG++K+ VK+E+E+   + IS E   E EE  D W RVERS
Sbjct: 49  NAKVDWRETPEAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERS 108

Query: 148 SGKFYRRIVLPDGADVDKVKAEMYNGVLTVTVPKYQFKKPMARMVQISG 197
           SGKF RR  LP+ A ++++KA M NGVL+VTVPK   KKP  + + ISG
Sbjct: 109 SGKFTRRFRLPENAKMEEIKASMENGVLSVTVPKVPEKKPEVKSIDISG 157

The following BLAST results are available for this feature:

BLAST of CmoCh14G000990 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P30221	8.1e-31	51.91	17.8 kDa class I heat shock protein OS=Solanum lycopersicum OX=4081 PE=2 SV=1	[more]
O82011	1.4e-30	52.67	17.7 kDa class I heat shock protein OS=Solanum peruvianum OX=4082 PE=2 SV=1	[more]
P02519	1.4e-30	54.47	17.3 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.3-B PE=3 SV=...	[more]
Q9ZW31	1.8e-30	53.08	17.6 kDa class I heat shock protein 2 OS=Arabidopsis thaliana OX=3702 GN=HSP17.6...	[more]
P27396	3.1e-30	54.07	17.8 kDa class I heat shock protein OS=Daucus carota OX=4039 PE=3 SV=1	[more]

BLAST of CmoCh14G000990 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F916	5.1e-105	100.00	18.1 kDa class I heat shock protein-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1FM77	5.2e-73	72.08	18.1 kDa class I heat shock protein-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1I321	1.2e-72	72.59	17.3 kDa class I heat shock protein-like OS=Cucurbita maxima OX=3661 GN=LOC11147...	[more]
H6TB36	6.3e-71	72.22	HSP22.8 OS=Citrullus lanatus OX=3654 PE=2 SV=1	[more]
A0A0A0LDJ8	3.9e-68	70.98	SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G733220 PE=3 S...	[more]

BLAST of CmoCh14G000990 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G29500.1	1.3e-31	53.08	HSP20-like chaperones superfamily protein	[more]
AT1G07400.1	9.2e-30	51.13	HSP20-like chaperones superfamily protein	[more]
AT1G59860.1	1.6e-29	51.54	HSP20-like chaperones superfamily protein	[more]
AT3G46230.1	3.5e-29	55.05	heat shock protein 17.4	[more]
AT1G53540.1	1.1e-27	52.29	HSP20-like chaperones superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 92..195 e-value: 1.4E-22 score: 79.7
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 82..197 score: 24.305016
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 43..196 e-value: 2.1E-36 score: 126.9
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 70..195
None	No IPR available	PANTHER	PTHR11527:SF305	17.6 KDA CLASS I HEAT SHOCK PROTEIN 1-RELATED	coord: 65..196
IPR031107	Small heat shock protein HSP20	PANTHER	PTHR11527	HEAT-SHOCK PROTEIN 20 FAMILY MEMBER	coord: 65..196

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh14G000990.1	CmoCh14G000990.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051259	protein complex oligomerization
biological_process	GO:0006457	protein folding
biological_process	GO:0009408	response to heat
biological_process	GO:0042542	response to hydrogen peroxide
biological_process	GO:0009651	response to salt stress
molecular_function	GO:0043621	protein self-association
molecular_function	GO:0051082	unfolded protein binding