CmoCh14G000840 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCGGACCAGACTCTGTTCCACAACAGCCTTCTCGCCCTGTACCTCATCGGACCACCGACCGCCGTCTCCCTGAGGTTTCTTCAGGCGCCCTACGGGAAGCACAACCGCCCGGGGTGGGGCCCGACCATGTCGGTTCCGTTGGCGTGGTTCCTCATGGAAAGTCCCACCCTATGGCTGACTCTCCTACTCTTCCCCTCCGGTGATAACTCCTCCAACTACAAGTCTCTCCTTCTCATCTCCCTCTTCCTCCTCCACTATCTCAATCGCACCTGTCTCTACCCGATTCGCCTTCTCCGGAGTGGGACTCGACGGAATTCCGCCACCGGTTTCCCGGTGGTTATGGCGCTCATGGCATTCGTGTTCAATTTGCTCAACTCTTACCTGCAGACCAGATCTGTGTCTCACTACATGGATTACGACAGAGACGAGTGGTTTTGGTGGCGGTTTTTCGGTGGGGCGGTGGTTTTTCTGCTGGGGATGGCAGTGAATATTTGGTCGGATGGTGTTCTGGTAAAATTGAAGATGGCGGGCGGCGGATATAAGGTGCCGACGGGAGGGTGGTTTGAGTTGGTGAGTTGCCCTAATTATTTGGGAGAGATTGCGGAGTGGCTGGGCTGGGCGGTGATGTGCGGGTCATGGGCTGGGCTAGGGTTTTTTCTTTACACGTGTGCCAATTTAGTGCCCAGGGCACGTGCGAACCACACGTGGTACTTGAACAAGTTCGGGGAGGATTATCCCCGAGATAGGAAGGCCGTTATTCCCTTCCTGTATTAAGTGTCTGTATCAAAAATTAAAATTAATAAATAATCTTAAATTCTCTTATTTTAATTGATTAAAAAAAATGAAAATTATTTATATTTAAAGAAATGGATGAAATTGTATTGGAACTTAGTTTTGCCGGGCAGCGCCTCCCTCTTCGTAGCTTGCTTCTTTTCCATGGATATTATGGCGGAGAAACCTCAAAATGGTGAGACCTTCTTCATTCCTATGGATCTTCTTCTCATTGTCTCTCTGTTTTTCTTCGTTATTTTTCCTTTTCGAATTATTGTCGGTTTGTTCATCTCGTAGTGGCGATTCTCGAGCAATTGCGACTAGGAATTGCTCGATTTGAGCTCGTATCTTCGCCTGTAAATTCAATTTCACCTTCCAACTCAGTCGCTCCTTCTTTCCCTTTTTCTATGAATCGCGGCCGCCCACTCTTTGCTAAAATTGGACCCATGCTGTAAGTTCATTCATTCTCTTTTAGTTGGGCGAAAGTTTTTGATATCCGTGTCTTTTCGGAATTCATAAATTGTTGTTCTTAGGCGCGCTGAATCGCCTGCATTGAGGAAAGCTGAGCACTACAAAGTCCAGAAAGTTACTGGAGATGGACGCTGCCTATTCCGTGCGCTTGTAACCTATCTTCCCTTATTCTTTTCTTGTGTTCTCTCTTGAATTTATTTTGTGATTCCCTCTGTTTATTATAATTTATGTTTCAAATTATCTAATTGTGGATTTTTGTTTTTCACTTTCTTTGCTATGCTTTTGATGCCACTTCATTTTCGGTCTAAAAAGCAAATTTTAAAAACAAAATTTATGAAGTGAAACACAAATAAATTTTTAGAAACAAGGATAATCTTCAGAAATAAGATTAAGGACAGTGATTCGCAAGTATTTGTATTCCTGCTTACTGGCTGTCTCAAGGAAGTGGGGGCAATCTTTATTGCCTTTTAAACTAACTTCCTCTTAATAAAATCAGGCCAAAGGAATGGCTTTCAACAAGGGGATTCCTCTTCGTCCATTTGAGGAGAAAAATGATGCAGGTAAGCTCTGATATATCATCTCTTATAGGCACAATGCGAGTGCAGACATATCTTCTTGGATAATTGAGTGCGGAACATAATCTTCATGTTGATTGAACAAGTAGGAAGATTGTGCAAATATTCTGTTTACTATATCAACCAAATGTTTTTGGGTGCTCCAGTTGTCTACTAAGGTTACCATGAACATCAAAGCTAGAGTCTTTTTTTTCTTTTGTCTTGAATTAGTGTTTCATTTTGACAAGCCCACTTCGACACTCAGGTGACCTTGACGAGTGAGTTGTGCTTGTAGCACAAAAATATGTTTATCAGTCACACAACAAAAGGCGTATGGGACTGTGGACATCTATCCTCTTTCTAATTGTGAGATCCTATATCGGTTGGGGAGGAGAACGAAACATTCTTTATACGGGTGTGGAAACCTCTCCTTAGCATATGCGTTTTAAAAACCTGAAGGGAAGTCTAAAAGGGAAAGCCCAAAGAGGACAATATCTTCTAGCGGTGGATTTGGGTTGTTATACTAATAGTTTTCAAGTGTTTGTAATCATATGAGTATACATTCTGGAGTTTGTGTATGAATGATCTAAAGTTCTAATTTTCATAAATCATTGATGTTGGTAGCTTAAACATGCAGATGATTTACGCATGGCTGTGAAAGAAGTTATCTGTGATAATGGCAAAGAAAGACGGCAGTATGAAGAAGCTCTCATTGCAATTACTGCTGAGGAGCCATTAGAACGGTTGGTTGGTTTCCCTTTTTACTTTTTTATTCTTTCTATTCATGTTAAGTTGTCCTCTTAGATTTTGGATTTCCACATGTCTTTGATTGCTGTCTGATAATGAGAACTTACAAAAATAAATTCAGCTACTGCCGACGAATTCGTACACCTAATTTCTGGGGAGGAGAGTCAGAGCTATTGGTTAGTTCTCTTCTTCTGGCGTATCTTCACAAGCTATACTCAGATTTTTGTTAAATCTATTTTGCATTTACGCGCCATGTGTAAAGCCACCGTTCGTTCACATCACGTATGAATCATGATCTGTATTAACCTCTATCAGGTATTGTCAAAGCTCTGTAAGCAACCTATCATTGTCTACATACCAGAGCATGAGGTATACTTTTCTCAACTAAGATACCTAAATCAATACCCATACAAATGTTGGTGTCTAAACTGAGGTCGAGTATATTCTCTGATAGTCTTGGGCAATTTCTGAGATAGGAACAGGATTAGGTGGTGTTACTCCCTTTAAGTTTAACTGCACAAATTTAATTCAGCCCTCTCTGATATAACGATTTCATTTGTGTCGACGTTTGAAAAGAATAGGAGAAATTAACATGTTCTCTACTTAATTTTCAGCACAGAATGGGTTCGCGTAGCTCTAGCTTTATTCCTATTGCAGAATATGGAGCTGAGTTCAAGGGAGGAAAACCCAAGAAACCTGTGAGGTTGCTTTACAGCGGTAGGAACCACTACGATCTGCTTGTTTGAGGACCTTATTTTAGGGGTGATGTGACCTTGTTGCCATCTAAAGATGAGCCAACGGAGACATGCTCGACCAACCATGAATGGTCGGAGGCACCCAATAACACAACACCCAAAGCTCTCTTATTGGTCAATCAATGCCAAGCTCTTCTAATCTAATTTTTTTGTAAAAGCTTTTGCATTGTGAGCGTGAGTTCCAAACTTTTGAGTTGTTTAAACATTGATTTTTTATGAAGAAATAAATGAATTGATGACACTTTAAGAGAAATGGGACATAAAGGTTGGATTTTTGTTGAAATTTGTTGCTTTTGGGAGATTTGTTTAATGGTCTGTCTATCTTTCACGTTAGCAAGCAATATTTTATTTTGTG ATGGCTTCGGACCAGACTCTGTTCCACAACAGCCTTCTCGCCCTGTACCTCATCGGACCACCGACCGCCGTCTCCCTGAGGTTTCTTCAGGCGCCCTACGGGAAGCACAACCGCCCGGGGTGGGGCCCGACCATGTCGGTTCCGTTGGCGTGGTTCCTCATGGAAAGTCCCACCCTATGGCTGACTCTCCTACTCTTCCCCTCCGGTGATAACTCCTCCAACTACAAGTCTCTCCTTCTCATCTCCCTCTTCCTCCTCCACTATCTCAATCGCACCTGTCTCTACCCGATTCGCCTTCTCCGGAGTGGGACTCGACGGAATTCCGCCACCGGTTTCCCGGTGGTTATGGCGCTCATGGCATTCGTGTTCAATTTGCTCAACTCTTACCTGCAGACCAGATCTGTGTCTCACTACATGGATTACGACAGAGACGAGTGGTTTTGGTGGCGGTTTTTCGGTGGGGCGGTGGTTTTTCTGCTGGGGATGGCAGTGAATATTTGGTCGGATGGTGTTCTGGTAAAATTGAAGATGGCGGGCGGCGGATATAAGGTGCCGACGGGAGGGTGGTTTGAGTTGGTGAGTTGCCCTAATTATTTGGGAGAGATTGCGGAGTGGCTGGGCTGGGCGGTGATGTGCGGGTCATGGGCTGGGCTAGGGTTTTTTCTTTACACGTGTGCCAATTTAGTGCCCAGGGCACGTGCGAACCACACGTGCGCCTCCCTCTTCGTAGCTTGCTTCTTTTCCATGGATATTATGGCGGAGAAACCTCAAAATGTGGCGATTCTCGAGCAATTGCGACTAGGAATTGCTCGATTTGAGCTCGTATCTTCGCCTGTAAATTCAATTTCACCTTCCAACTCAGTCGCTCCTTCTTTCCCTTTTTCTATGAATCGCGGCCGCCCACTCTTTGCTAAAATTGGACCCATGCTGCGCGCTGAATCGCCTGCATTGAGGAAAGCTGAGCACTACAAAGTCCAGAAAGTTACTGGAGATGGACGCTGCCTATTCCGTGCGCTTGCCAAAGGAATGGCTTTCAACAAGGGGATTCCTCTTCGTCCATTTGAGGAGAAAAATGATGCAGATGATTTACGCATGGCTGTGAAAGAAGTTATCTGTGATAATGGCAAAGAAAGACGGCAGTATGAAGAAGCTCTCATTGCAATTACTGCTGAGGAGCCATTAGAACGGTTGGTATTGTCAAAGCTCTGTAAGCAACCTATCATTGTCTACATACCAGAGCATGAGCACAGAATGGGTTCGCGTAGCTCTAGCTTTATTCCTATTGCAGAATATGGAGCTGAGTTCAAGGGAGGAAAACCCAAGAAACCTGTGAGGTTGCTTTACAGCGGTAGGAACCACTACGATCTGCTTGTTTGAGGACCTTATTTTAGGGGTGATGTGACCTTGTTGCCATCTAAAGATGAGCCAACGGAGACATGCTCGACCAACCATGAATGGTCGGAGGCACCCAATAACACAACACCCAAAGCTCTCTTATTGGTCAATCAATGCCAAGCTCTTCTAATCTAATTTTTTTGTAAAAGCTTTTGCATTGTGAGCGTGAGTTCCAAACTTTTGAGTTGTTTAAACATTGATTTTTTATGAAGAAATAAATGAATTGATGACACTTTAAGAGAAATGGGACATAAAGGTTGGATTTTTGTTGAAATTTGTTGCTTTTGGGAGATTTGTTTAATGGTCTGTCTATCTTTCACGTTAGCAAGCAATATTTTATTTTGTG ATGGCTTCGGACCAGACTCTGTTCCACAACAGCCTTCTCGCCCTGTACCTCATCGGACCACCGACCGCCGTCTCCCTGAGGTTTCTTCAGGCGCCCTACGGGAAGCACAACCGCCCGGGGTGGGGCCCGACCATGTCGGTTCCGTTGGCGTGGTTCCTCATGGAAAGTCCCACCCTATGGCTGACTCTCCTACTCTTCCCCTCCGGTGATAACTCCTCCAACTACAAGTCTCTCCTTCTCATCTCCCTCTTCCTCCTCCACTATCTCAATCGCACCTGTCTCTACCCGATTCGCCTTCTCCGGAGTGGGACTCGACGGAATTCCGCCACCGGTTTCCCGGTGGTTATGGCGCTCATGGCATTCGTGTTCAATTTGCTCAACTCTTACCTGCAGACCAGATCTGTGTCTCACTACATGGATTACGACAGAGACGAGTGGTTTTGGTGGCGGTTTTTCGGTGGGGCGGTGGTTTTTCTGCTGGGGATGGCAGTGAATATTTGGTCGGATGGTGTTCTGGTAAAATTGAAGATGGCGGGCGGCGGATATAAGGTGCCGACGGGAGGGTGGTTTGAGTTGGTGAGTTGCCCTAATTATTTGGGAGAGATTGCGGAGTGGCTGGGCTGGGCGGTGATGTGCGGGTCATGGGCTGGGCTAGGGTTTTTTCTTTACACGTGTGCCAATTTAGTGCCCAGGGCACGTGCGAACCACACGTGCGCCTCCCTCTTCGTAGCTTGCTTCTTTTCCATGGATATTATGGCGGAGAAACCTCAAAATGTGGCGATTCTCGAGCAATTGCGACTAGGAATTGCTCGATTTGAGCTCGTATCTTCGCCTGTAAATTCAATTTCACCTTCCAACTCAGTCGCTCCTTCTTTCCCTTTTTCTATGAATCGCGGCCGCCCACTCTTTGCTAAAATTGGACCCATGCTGCGCGCTGAATCGCCTGCATTGAGGAAAGCTGAGCACTACAAAGTCCAGAAAGTTACTGGAGATGGACGCTGCCTATTCCGTGCGCTTGCCAAAGGAATGGCTTTCAACAAGGGGATTCCTCTTCGTCCATTTGAGGAGAAAAATGATGCAGATGATTTACGCATGGCTGTGAAAGAAGTTATCTGTGATAATGGCAAAGAAAGACGGCAGTATGAAGAAGCTCTCATTGCAATTACTGCTGAGGAGCCATTAGAACGGTTGGTATTGTCAAAGCTCTGTAAGCAACCTATCATTGTCTACATACCAGAGCATGAGCACAGAATGGGTTCGCGTAGCTCTAGCTTTATTCCTATTGCAGAATATGGAGCTGAGTTCAAGGGAGGAAAACCCAAGAAACCTGTGAGGTTGCTTTACAGCGGTAGGAACCACTACGATCTGCTTGTTTGA MASDQTLFHNSLLALYLIGPPTAVSLRFLQAPYGKHNRPGWGPTMSVPLAWFLMESPTLWLTLLLFPSGDNSSNYKSLLLISLFLLHYLNRTCLYPIRLLRSGTRRNSATGFPVVMALMAFVFNLLNSYLQTRSVSHYMDYDRDEWFWWRFFGGAVVFLLGMAVNIWSDGVLVKLKMAGGGYKVPTGGWFELVSCPNYLGEIAEWLGWAVMCGSWAGLGFFLYTCANLVPRARANHTCASLFVACFFSMDIMAEKPQNVAILEQLRLGIARFELVSSPVNSISPSNSVAPSFPFSMNRGRPLFAKIGPMLRAESPALRKAEHYKVQKVTGDGRCLFRALAKGMAFNKGIPLRPFEEKNDADDLRMAVKEVICDNGKERRQYEEALIAITAEEPLERLVLSKLCKQPIIVYIPEHEHRMGSRSSSFIPIAEYGAEFKGGKPKKPVRLLYSGRNHYDLLV Homology
BLAST of CmoCh14G000840 vs. ExPASy Swiss-Prot
Match: Q2QDF6 (Steroid 5-alpha-reductase DET2 OS=Gossypium hirsutum OX=3635 GN=DET2 PE=1 SV=1) HSP 1 Score: 327.0 bits (837), Expect = 3.4e-88 Identity = 163/236 (69.07%), Postives = 181/236 (76.69%), Query Frame = 0
BLAST of CmoCh14G000840 vs. ExPASy Swiss-Prot
Match: Q38944 (Steroid 5-alpha-reductase DET2 OS=Arabidopsis thaliana OX=3702 GN=DET2 PE=1 SV=2) HSP 1 Score: 316.6 bits (810), Expect = 4.6e-85 Identity = 152/236 (64.41%), Postives = 177/236 (75.00%), Query Frame = 0
BLAST of CmoCh14G000840 vs. ExPASy Swiss-Prot
Match: Q5K2N1 (Steroid 5-alpha-reductase DET2 OS=Solanum lycopersicum OX=4081 GN=DET2 PE=1 SV=1) HSP 1 Score: 265.8 bits (678), Expect = 9.2e-70 Identity = 129/236 (54.66%), Postives = 168/236 (71.19%), Query Frame = 0
BLAST of CmoCh14G000840 vs. ExPASy Swiss-Prot
Match: Q8GYW0 (OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 3 OS=Arabidopsis thaliana OX=3702 GN=OTU3 PE=1 SV=1) HSP 1 Score: 221.9 bits (564), Expect = 1.5e-56 Identity = 130/227 (57.27%), Postives = 151/227 (66.52%), Query Frame = 0
BLAST of CmoCh14G000840 vs. ExPASy Swiss-Prot
Match: P24008 (3-oxo-5-alpha-steroid 4-dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Srd5a1 PE=1 SV=2) HSP 1 Score: 127.1 bits (318), Expect = 5.1e-28 Identity = 81/218 (37.16%), Postives = 127/218 (58.26%), Query Frame = 0
BLAST of CmoCh14G000840 vs. ExPASy TrEMBL
Match: A0A6J1F1U8 (Steroid 5-alpha-reductase DET2 OS=Cucurbita moschata OX=3662 GN=LOC111441400 PE=3 SV=1) HSP 1 Score: 498.4 bits (1282), Expect = 3.1e-137 Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0
BLAST of CmoCh14G000840 vs. ExPASy TrEMBL
Match: A0A6J1J7F2 (Steroid 5-alpha-reductase DET2 OS=Cucurbita maxima OX=3661 GN=LOC111481932 PE=3 SV=1) HSP 1 Score: 493.8 bits (1270), Expect = 7.7e-136 Identity = 233/237 (98.31%), Postives = 236/237 (99.58%), Query Frame = 0
BLAST of CmoCh14G000840 vs. ExPASy TrEMBL
Match: A0A0A0LAB3 (Steroid 5-alpha-reductase DET2 OS=Cucumis sativus OX=3659 GN=Csa_3G732550 PE=3 SV=1) HSP 1 Score: 434.1 bits (1115), Expect = 7.2e-118 Identity = 204/237 (86.08%), Postives = 216/237 (91.14%), Query Frame = 0
BLAST of CmoCh14G000840 vs. ExPASy TrEMBL
Match: A0A6J1F6U0 (Ubiquitin thioesterase OTU1 OS=Cucurbita moschata OX=3662 GN=LOC111441401 PE=4 SV=1) HSP 1 Score: 429.1 bits (1102), Expect = 2.3e-116 Identity = 220/237 (92.83%), Postives = 220/237 (92.83%), Query Frame = 0
BLAST of CmoCh14G000840 vs. ExPASy TrEMBL
Match: A0A5D3DNY2 (Steroid 5-alpha-reductase DET2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001080 PE=3 SV=1) HSP 1 Score: 427.9 bits (1099), Expect = 5.2e-116 Identity = 200/237 (84.39%), Postives = 214/237 (90.30%), Query Frame = 0
BLAST of CmoCh14G000840 vs. TAIR 10
Match: AT2G38050.1 (3-oxo-5-alpha-steroid 4-dehydrogenase family protein ) HSP 1 Score: 316.6 bits (810), Expect = 3.2e-86 Identity = 152/236 (64.41%), Postives = 177/236 (75.00%), Query Frame = 0
BLAST of CmoCh14G000840 vs. TAIR 10
Match: AT2G38025.1 (Cysteine proteinases superfamily protein ) HSP 1 Score: 221.9 bits (564), Expect = 1.1e-57 Identity = 130/227 (57.27%), Postives = 151/227 (66.52%), Query Frame = 0
BLAST of CmoCh14G000840 vs. TAIR 10
Match: AT3G57810.1 (Cysteine proteinases superfamily protein ) HSP 1 Score: 63.2 bits (152), Expect = 6.4e-10 Identity = 48/148 (32.43%), Postives = 70/148 (47.30%), Query Frame = 0
BLAST of CmoCh14G000840 vs. TAIR 10
Match: AT3G57810.2 (Cysteine proteinases superfamily protein ) HSP 1 Score: 63.2 bits (152), Expect = 6.4e-10 Identity = 48/148 (32.43%), Postives = 70/148 (47.30%), Query Frame = 0
BLAST of CmoCh14G000840 vs. TAIR 10
Match: AT3G57810.3 (Cysteine proteinases superfamily protein ) HSP 1 Score: 63.2 bits (152), Expect = 6.4e-10 Identity = 48/148 (32.43%), Postives = 70/148 (47.30%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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