CmoCh13G011150 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh13G011150
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Unknown protein
Location	Cmo_Chr13: 9115489 .. 9115869 (-)
RNA-Seq Expression	CmoCh13G011150
Synteny	CmoCh13G011150

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCAAAGCTTCTTCCTCCTTCTTCCAAACCCTAAAGCGCTACATCAAGAAGCCTTGGGAGATCACCGGCCCGTGTGCAGATCCAGAGTACAAATTGGCCGTCCCGAGTGCCATAGAGTACAGGGTCTTTTGCCCCGCCACTACGAAGGAGAAAGCGATTGTCCCTACCTCCAATCCCGAGACCGTCTTTGATATTAAGTATTACACCCGCGACCAGCGTCGCAATCGCCCTCCAATTCGACGCACCATCCTCAAGAAACCTGACGTCGAGAAGATGATGAAGGAGACCAAGTTCGACCCTGCTGACTTCCCCAAAGTCTATCTGACTGCCGCGATCGAGGAGGATATGAATGCCCGTGGAGGTGGTTATCAAAAGTAG

mRNA sequence

ATGGCCAAAGCTTCTTCCTCCTTCTTCCAAACCCTAAAGCGCTACATCAAGAAGCCTTGGGAGATCACCGGCCCGTGTGCAGATCCAGAGTACAAATTGGCCGTCCCGAGTGCCATAGAGTACAGGGTCTTTTGCCCCGCCACTACGAAGGAGAAAGCGATTGTCCCTACCTCCAATCCCGAGACCGTCTTTGATATTAAGTATTACACCCGCGACCAGCGTCGCAATCGCCCTCCAATTCGACGCACCATCCTCAAGAAACCTGACGTCGAGAAGATGATGAAGGAGACCAAGTTCGACCCTGCTGACTTCCCCAAAGTCTATCTGACTGCCGCGATCGAGGAGGATATGAATGCCCGTGGAGGTGGTTATCAAAAGTAG

Coding sequence (CDS)

ATGGCCAAAGCTTCTTCCTCCTTCTTCCAAACCCTAAAGCGCTACATCAAGAAGCCTTGGGAGATCACCGGCCCGTGTGCAGATCCAGAGTACAAATTGGCCGTCCCGAGTGCCATAGAGTACAGGGTCTTTTGCCCCGCCACTACGAAGGAGAAAGCGATTGTCCCTACCTCCAATCCCGAGACCGTCTTTGATATTAAGTATTACACCCGCGACCAGCGTCGCAATCGCCCTCCAATTCGACGCACCATCCTCAAGAAACCTGACGTCGAGAAGATGATGAAGGAGACCAAGTTCGACCCTGCTGACTTCCCCAAAGTCTATCTGACTGCCGCGATCGAGGAGGATATGAATGCCCGTGGAGGTGGTTATCAAAAGTAG

Protein sequence

MAKASSSFFQTLKRYIKKPWEITGPCADPEYKLAVPSAIEYRVFCPATTKEKAIVPTSNPETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKETKFDPADFPKVYLTAAIEEDMNARGGGYQK

Homology

[Close]

BLAST of CmoCh13G011150 vs. ExPASy TrEMBL
Match: A0A6J1E7N6 (uncharacterized protein LOC111431390 OS=Cucurbita moschata OX=3662 GN=LOC111431390 PE=4 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 2.3e-66
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 1   MAKASSSFFQTLKRYIKKPWEITGPCADPEYKLAVPSAIEYRVFCPATTKEKAIVPTSNP 60
           MAKASSSFFQTLKRYIKKPWEITGPCADPEYKLAVPSAIEYRVFCPATTKEKAIVPTSNP
Sbjct: 22  MAKASSSFFQTLKRYIKKPWEITGPCADPEYKLAVPSAIEYRVFCPATTKEKAIVPTSNP 81

Query: 61  ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKETKFDPADFPKVYLTAAIEEDMNAR 120
           ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKETKFDPADFPKVYLTAAIEEDMNAR
Sbjct: 82  ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKETKFDPADFPKVYLTAAIEEDMNAR 141

Query: 121 GGGYQK 127
           GGGYQK
Sbjct: 142 GGGYQK 147

[Close]

BLAST of CmoCh13G011150 vs. ExPASy TrEMBL
Match: A0A6J1KK07 (uncharacterized protein LOC111495303 OS=Cucurbita maxima OX=3661 GN=LOC111495303 PE=4 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 5.7e-65
Identity = 123/126 (97.62%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 1   MAKASSSFFQTLKRYIKKPWEITGPCADPEYKLAVPSAIEYRVFCPATTKEKAIVPTSNP 60
           MAKASSSFFQTLKRYIKKPWEITGPCADPEYKLAVPSAIEYRVFCPA+TKEKAIVPTSNP
Sbjct: 1   MAKASSSFFQTLKRYIKKPWEITGPCADPEYKLAVPSAIEYRVFCPASTKEKAIVPTSNP 60

Query: 61  ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKETKFDPADFPKVYLTAAIEEDMNAR 120
           ETVFDIKYY+RDQRRNRPPIRRTILKKPDVEKMMKETKFDPADFPKVYLTAAIEED+NAR
Sbjct: 61  ETVFDIKYYSRDQRRNRPPIRRTILKKPDVEKMMKETKFDPADFPKVYLTAAIEEDINAR 120

Query: 121 GGGYQK 127
           GGGYQK
Sbjct: 121 GGGYQK 126

[Close]

BLAST of CmoCh13G011150 vs. ExPASy TrEMBL
Match: A0A5D3BI32 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G001440 PE=4 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 2.2e-61
Identity = 116/126 (92.06%), Postives = 121/126 (96.03%), Query Frame = 0


Query: 1   MAKASSSFFQTLKRYIKKPWEITGPCADPEYKLAVPSAIEYRVFCPATTKEKAIVPTSNP 60
           MAKA+SS  QTL+RYIKKPWEITGPCADPEY+ AVPSA+EYRV CPAT KEKAI+PTSNP
Sbjct: 1   MAKAASSLLQTLRRYIKKPWEITGPCADPEYRSAVPSALEYRVVCPATIKEKAIIPTSNP 60

Query: 61  ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKETKFDPADFPKVYLTAAIEEDMNAR 120
           ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKETKFDPADFPKVYLTAAIEEDMNAR
Sbjct: 61  ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKETKFDPADFPKVYLTAAIEEDMNAR 120

Query: 121 GGGYQK 127
           GGGYQK
Sbjct: 121 GGGYQK 126

[Close]

BLAST of CmoCh13G011150 vs. ExPASy TrEMBL
Match: A0A1S3BR63 (uncharacterized protein LOC103492624 OS=Cucumis melo OX=3656 GN=LOC103492624 PE=4 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 2.2e-61
Identity = 116/126 (92.06%), Postives = 121/126 (96.03%), Query Frame = 0


Query: 1   MAKASSSFFQTLKRYIKKPWEITGPCADPEYKLAVPSAIEYRVFCPATTKEKAIVPTSNP 60
           MAKA+SS  QTL+RYIKKPWEITGPCADPEY+ AVPSA+EYRV CPAT KEKAI+PTSNP
Sbjct: 6   MAKAASSLLQTLRRYIKKPWEITGPCADPEYRSAVPSALEYRVVCPATIKEKAIIPTSNP 65

Query: 61  ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKETKFDPADFPKVYLTAAIEEDMNAR 120
           ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKETKFDPADFPKVYLTAAIEEDMNAR
Sbjct: 66  ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKETKFDPADFPKVYLTAAIEEDMNAR 125

Query: 121 GGGYQK 127
           GGGYQK
Sbjct: 126 GGGYQK 131

[Close]

BLAST of CmoCh13G011150 vs. ExPASy TrEMBL
Match: A0A6J1GSY9 (uncharacterized protein LOC111456682 OS=Cucurbita moschata OX=3662 GN=LOC111456682 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 1.9e-60
Identity = 113/126 (89.68%), Postives = 122/126 (96.83%), Query Frame = 0


Query: 1   MAKASSSFFQTLKRYIKKPWEITGPCADPEYKLAVPSAIEYRVFCPATTKEKAIVPTSNP 60
           MAKASSS FQTLKR+IKKPWEITGPCADPEY+ AVPSA+EYRVFCPATTK+K IVPTSNP
Sbjct: 63  MAKASSSLFQTLKRFIKKPWEITGPCADPEYRSAVPSALEYRVFCPATTKQKPIVPTSNP 122

Query: 61  ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKETKFDPADFPKVYLTAAIEEDMNAR 120
           +TVFDIKYY+RDQRRNRPPIRR ILKKPD+E+MMKETKFDPADFPKVYLTAAIEED+NAR
Sbjct: 123 QTVFDIKYYSRDQRRNRPPIRRIILKKPDIEQMMKETKFDPADFPKVYLTAAIEEDINAR 182

Query: 121 GGGYQK 127
           GGGYQK
Sbjct: 183 GGGYQK 188

[Close]

BLAST of CmoCh13G011150 vs. NCBI nr
Match: XP_022923781.1 (uncharacterized protein LOC111431390, partial [Cucurbita moschata])

HSP 1 Score: 261.2 bits (666), Expect = 4.8e-66
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 1   MAKASSSFFQTLKRYIKKPWEITGPCADPEYKLAVPSAIEYRVFCPATTKEKAIVPTSNP 60
           MAKASSSFFQTLKRYIKKPWEITGPCADPEYKLAVPSAIEYRVFCPATTKEKAIVPTSNP
Sbjct: 22  MAKASSSFFQTLKRYIKKPWEITGPCADPEYKLAVPSAIEYRVFCPATTKEKAIVPTSNP 81

Query: 61  ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKETKFDPADFPKVYLTAAIEEDMNAR 120
           ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKETKFDPADFPKVYLTAAIEEDMNAR
Sbjct: 82  ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKETKFDPADFPKVYLTAAIEEDMNAR 141

Query: 121 GGGYQK 127
           GGGYQK
Sbjct: 142 GGGYQK 147

[Close]

BLAST of CmoCh13G011150 vs. NCBI nr
Match: XP_023001049.1 (uncharacterized protein LOC111495303 [Cucurbita maxima] >XP_023001050.1 uncharacterized protein LOC111495303 [Cucurbita maxima])

HSP 1 Score: 256.5 bits (654), Expect = 1.2e-64
Identity = 123/126 (97.62%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 1   MAKASSSFFQTLKRYIKKPWEITGPCADPEYKLAVPSAIEYRVFCPATTKEKAIVPTSNP 60
           MAKASSSFFQTLKRYIKKPWEITGPCADPEYKLAVPSAIEYRVFCPA+TKEKAIVPTSNP
Sbjct: 1   MAKASSSFFQTLKRYIKKPWEITGPCADPEYKLAVPSAIEYRVFCPASTKEKAIVPTSNP 60

Query: 61  ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKETKFDPADFPKVYLTAAIEEDMNAR 120
           ETVFDIKYY+RDQRRNRPPIRRTILKKPDVEKMMKETKFDPADFPKVYLTAAIEED+NAR
Sbjct: 61  ETVFDIKYYSRDQRRNRPPIRRTILKKPDVEKMMKETKFDPADFPKVYLTAAIEEDINAR 120

Query: 121 GGGYQK 127
           GGGYQK
Sbjct: 121 GGGYQK 126

[Close]

BLAST of CmoCh13G011150 vs. NCBI nr
Match: XP_023520186.1 (uncharacterized protein LOC111783486 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 255.0 bits (650), Expect = 3.4e-64
Identity = 122/126 (96.83%), Postives = 125/126 (99.21%), Query Frame = 0


Query: 1   MAKASSSFFQTLKRYIKKPWEITGPCADPEYKLAVPSAIEYRVFCPATTKEKAIVPTSNP 60
           MAKASSSFFQTLKRYIKKPWEITGPCADPEYKLAVPSAIEYR+ CPA+TKEKAIVPTSNP
Sbjct: 1   MAKASSSFFQTLKRYIKKPWEITGPCADPEYKLAVPSAIEYRIVCPASTKEKAIVPTSNP 60

Query: 61  ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKETKFDPADFPKVYLTAAIEEDMNAR 120
           ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKETKFDPADFPKVYLTAAIEED+NAR
Sbjct: 61  ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKETKFDPADFPKVYLTAAIEEDINAR 120

Query: 121 GGGYQK 127
           GGGYQK
Sbjct: 121 GGGYQK 126

[Close]

BLAST of CmoCh13G011150 vs. NCBI nr
Match: XP_038895860.1 (uncharacterized protein LOC120084028 [Benincasa hispida])

HSP 1 Score: 252.7 bits (644), Expect = 1.7e-63
Identity = 120/126 (95.24%), Postives = 124/126 (98.41%), Query Frame = 0


Query: 1   MAKASSSFFQTLKRYIKKPWEITGPCADPEYKLAVPSAIEYRVFCPATTKEKAIVPTSNP 60
           MAKASSS FQTLKRY KKPWEITGPCADPEY+LAVPSA+EYRVFCPATTKEKAIVPTSNP
Sbjct: 49  MAKASSSLFQTLKRYFKKPWEITGPCADPEYRLAVPSALEYRVFCPATTKEKAIVPTSNP 108

Query: 61  ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKETKFDPADFPKVYLTAAIEEDMNAR 120
           ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKET+FDPADFPKVYLTAAIEED+NAR
Sbjct: 109 ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKETRFDPADFPKVYLTAAIEEDINAR 168

Query: 121 GGGYQK 127
           GGGYQK
Sbjct: 169 GGGYQK 174

[Close]

BLAST of CmoCh13G011150 vs. NCBI nr
Match: KAG7019990.1 (Transcription factor TCP5, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 250.8 bits (639), Expect = 6.4e-63
Identity = 121/122 (99.18%), Postives = 122/122 (100.00%), Query Frame = 0


Query: 1   MAKASSSFFQTLKRYIKKPWEITGPCADPEYKLAVPSAIEYRVFCPATTKEKAIVPTSNP 60
           MAKASSSFFQTLKRYIKKPWEITGPCADPEYKLAVPSAIEYRVFCPATTKEKAIVPTSNP
Sbjct: 1   MAKASSSFFQTLKRYIKKPWEITGPCADPEYKLAVPSAIEYRVFCPATTKEKAIVPTSNP 60

Query: 61  ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKETKFDPADFPKVYLTAAIEEDMNAR 120
           ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKETKFDPADFPKVYLTAAIEED+NAR
Sbjct: 61  ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKETKFDPADFPKVYLTAAIEEDINAR 120

Query: 121 GG 123
           GG
Sbjct: 121 GG 122

[Close]

BLAST of CmoCh13G011150 vs. TAIR 10
Match: AT5G08060.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; Has 42 Blast hits to 42 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 172.2 bits (435), Expect = 2.7e-43
Identity = 82/127 (64.57%), Postives = 102/127 (80.31%), Query Frame = 0


Query: 1   MAKASSSFFQTLKRYIKKPWEITGPCADPEYKLAVPSAIEYRVFCPATTKEKAIVPTSNP 60
           ++ A+SS  Q L+RYIKKPW+ITGPCA PEY  AVP A EYR+ CPAT  E+AIVP+S+P
Sbjct: 5   VSTAASSLVQNLRRYIKKPWQITGPCAHPEYLEAVPKATEYRLRCPATIDEEAIVPSSDP 64

Query: 61  ETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKETK-FDPADFPKVYLTAAIEEDMNA 120
           ETV++I Y+ RDQRRNRPPIRR +L K +V +MM E K FD +DFPKVYLT  +EED++ 
Sbjct: 65  ETVYNIVYHGRDQRRNRPPIRRYVLTKDNVVQMMNEKKSFDVSDFPKVYLTTTVEEDLDT 124

Query: 121 RGGGYQK 127
           RGGGY+K
Sbjct: 125 RGGGYEK 131

The following BLAST results are available for this feature:

BLAST of CmoCh13G011150 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh13G011150 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E7N6	2.3e-66	100.00	uncharacterized protein LOC111431390 OS=Cucurbita moschata OX=3662 GN=LOC1114313...	[more]
A0A6J1KK07	5.7e-65	97.62	uncharacterized protein LOC111495303 OS=Cucurbita maxima OX=3661 GN=LOC111495303...	[more]
A0A5D3BI32	2.2e-61	92.06	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BR63	2.2e-61	92.06	uncharacterized protein LOC103492624 OS=Cucumis melo OX=3656 GN=LOC103492624 PE=...	[more]
A0A6J1GSY9	1.9e-60	89.68	uncharacterized protein LOC111456682 OS=Cucurbita moschata OX=3662 GN=LOC1114566...	[more]

BLAST of CmoCh13G011150 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022923781.1	4.8e-66	100.00	uncharacterized protein LOC111431390, partial [Cucurbita moschata]	[more]
XP_023001049.1	1.2e-64	97.62	uncharacterized protein LOC111495303 [Cucurbita maxima] >XP_023001050.1 uncharac...	[more]
XP_023520186.1	3.4e-64	96.83	uncharacterized protein LOC111783486 [Cucurbita pepo subsp. pepo]	[more]
XP_038895860.1	1.7e-63	95.24	uncharacterized protein LOC120084028 [Benincasa hispida]	[more]
KAG7019990.1	6.4e-63	99.18	Transcription factor TCP5, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of CmoCh13G011150 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G08060.1	2.7e-43	64.57	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36391	FURRY	coord: 1..126

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh13G011150.1	CmoCh13G011150.1	mRNA