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CmoCh13G011030 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAGAGAGAGAGAGAGAGAGAGAGAGAGGCGGGATGGTGACAGGCAAAAGGATACCTCACAGACAGTGGATTAGCCAATGAGAAATCGACAACGAATTAGACGAAACCAAGGTGGTATTACAAAACCACCCATCTAAAAATCTCACCTCCATGTTCTTGAATTCGTTTGGTTTTGAATCAGTTTCATATTTGTGGGAGGGAGTTGGAGTTGATTTTGGTTTAGGGTTTGTGAATGGGGAGGGGAAGAGTGCAGTTGAAGAGGATTGAGAACAAGATTAATATGCAAGTGACCTTCTCCAAGAGAAGGTCTGGTCTGCTGAAGAAAGCTCATGAGATTTCAGTTCTGTGCGATGCTGAGGTTGCTCTTATCGTCTTCTCCACCAAGGGCAAGCTGTTTGAATACTCCACTGATTCTTGGTATGTTCTTCCATTGCTCTTCATCAATACCACCCATGTTTCTTCTGCTGCTTCTTATCAACAAAACCCAGCTCCCAAATTCCATTATCATTATTGTTTTGGTTTTTCAGTATTATGCTCCAATCACTACATTCTCCTTGTCGTGTTTTTTTCAACTTTACACTACTTATGAGCATAACCCAATGAAAAGAGGCAGCTAGATTTTCATGTTTTCATGTTTTCATGTTTTCATGTTTTTTTTTCCAACCCAAAATGATTGGACCCATTTCAGATTTCTCTTTTTTAGTGTTCATTATTGAACAAATGAACAACAACCCTTCTTCCCTCCCCTTCTTCTTGTTGCTCTAACTAAGTGGATCAACTTGAATTACTCTACAAATTTACTATTTAATCAACCATTTAAATCCATCCTAAATATTTGTATTTTTCTCCAGATTACCCTATTTTATTTTTCATAGTTCGACTATGGAGTAGGGATTCAAACTTTCGACTTCCGAGATAGAAAGCCGTCTCTTAACCTTGAGTTATAGGCTACAAAAACAAGAAAAACAAAGGGTTAATAGACAAGATTTGTATGATTTTATTTAAAGCAAACAAAATGCCAAAAGCACTTTAATAAAGAAATTAAGTTATTTATTTATTCATTCTTTTGTTTCAGAAAAAGAGAGATTGAATTAACCATATAAACTTCTTATTATCAATCAACATATTTCAACTAATTCCAATTTATGAGCGCTTAACCGAAGATAAAACATGGAGTATATAGTTAGAATGGTGATTGGCATTATTATTGTGTGTATAATGAACGAGTGTAGCTTTGATGAGCAGCATGGAGAAGATCCTCGAGCGTTATGAGAGGTACTCATACGCAGAGAGGCGGCTCATTGCAAATGATAGCCAATCAAACGTACGTATCCAACCCAATCCATCCTATGAAGTTGGGGGTGATTATAATGAAAAGGTTTTGTGTGTTTAGGGAAATTGGACTCTTGAATATGCGAAGCTTAAAGCCAGAATAGAGGTTCTTCAGAAGAACCACAGGTAAAACTTAGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTGTGGGAATGGTATAAAGTTGGTTGGGATTTGCAGGCATTTCATGGGGGAAGATCTTGAGTCCTTGAGCCTAAAAGAGCTTCAAAATATTGAGCAACAACTTGATTCTGCGCTCAAGCATGTAAGAACCAGGAAGGTATGGATATGATGATTATGTTAGATTGGATTATTGTTCATCATTATACACACTTCATCTCCATAACCTTTTCTTCTACAGAACCAACTCATGCATGAATCCATTTCAGATCTTCAGAAAAAGGTAACTTTTTTTTTTTTTTTGTTGCCTTCACACCTCCAAAAAAATGCTTAATGATTCTATATACGTACATAAACTTGTTCACCTAATCTCGCGAAACAACCGTTTAACTCTATAATATTTGGTTTGAGTAGAATTATAATCTTAGAAAATTTTATTCTCAGTTAACATGTGGCTTGGTTTGAAAATATGTTTTAAAATGATTTTGAACATGACAAGAGTAGAGATGTCCAGCTTACAGGGCTCCCTCATTTTTTATTTTCTTTTTAATTTTGTTAGTAGAACATTATATTAAATAGAAATTATTTTTTGAAAAATGAAAAAGTTTTCCAAAAAAAAAAAAAAAGGAAAAGAAAAACAAGAAAGCATTGTCCCATGGTCATCTCTAGCAGTCACAAACACACCCTTAAATCTCTTTACTTGGATTAATCTGATAGACATATATGGGATAACATTGATGGTGGATAGAACACTTGTAGAATTTATGTAACAATATCAATTTGGATCTGTAAAAACAAGAACAATAAGAACAATTTCATTATGTTGGCATGTTTGATCAGGACAAGGCGCTTCAGGACCAAAACAACATGTTAGCCAAGAAGGTAACTCTCTTCTTCTTCTTCTTCTTACCTTCATGCATGCGCGCACACACACACACGCACACCATAATGTCCTTACTTAATTTACTTGCTTTCTTTTACTCTAAACAATAGATAAGGGAGAAGGAGAAAGCACAAGCTCAAAATCCACAAATGGAGCAGCACCATCAGCAGCATAGCCATGCCATTGAACCTTCTCCACTACTTCTTCCTCAGCCATTCCTATCTCTTAACATGCCGTTAGTATCTTAACTACAAACATTACATTGATTTAGATTAGGAGTTAACATCAACTGGGTTTGTTTACTTGCAGTTGTCCTTACCCAACACACGCCACCGGACACGAAGAATCCGCCGCCAACCACGACAGATCCGGCACCCTCCTGCCGCCCTGGATGCTCGGCCACCACCTTGGTAACTGAAATCATATAGCACTACCTAATTCTTTTGCTGTATGGACCCCTTTTGGATAATGGATGCTTGTGAAAGTTGTAGCTTTTTTAGTAAGTAATTTTCAGAAAAGGGTATAATGAGCTAAGAAGCATGGCTGGCTTGTGGGTTCCAAAATTAGACCTTTTTATAGAATAAGGCACACAGTGACATATGATTGTATATAGATGTGTAAATGGCAGCCACTAACTAACTTTAGTACTCTAATTTTCCAACATCTCTCCCCCTTCTTGTCTGTTTTAGTTCGTTACGTATCGATATCAGTCTCACGATTATAAAATGCATATGTTAAGGAGAGGTTTCTATGTCTTTATTATAAGAAATGCTTCGTCCCCCTCTCCAACCAATATGAGATCTCAC GAGAGAGAGAGAGAGAGAGAGAGAGAGGCGGGATGGTGACAGGCAAAAGGATACCTCACAGACAGTGGATTAGCCAATGAGAAATCGACAACGAATTAGACGAAACCAAGGTGGTATTACAAAACCACCCATCTAAAAATCTCACCTCCATGTTCTTGAATTCGTTTGGTTTTGAATCAGTTTCATATTTGTGGGAGGGAGTTGGAGTTGATTTTGGTTTAGGGTTTGTGAATGGGGAGGGGAAGAGTGCAGTTGAAGAGGATTGAGAACAAGATTAATATGCAAGTGACCTTCTCCAAGAGAAGGTCTGGTCTGCTGAAGAAAGCTCATGAGATTTCAGTTCTGTGCGATGCTGAGGTTGCTCTTATCGTCTTCTCCACCAAGGGCAAGCTGTTTGAATACTCCACTGATTCTTGCATGGAGAAGATCCTCGAGCGTTATGAGAGGTACTCATACGCAGAGAGGCGGCTCATTGCAAATGATAGCCAATCAAACGGAAATTGGACTCTTGAATATGCGAAGCTTAAAGCCAGAATAGAGGTTCTTCAGAAGAACCACAGGCATTTCATGGGGGAAGATCTTGAGTCCTTGAGCCTAAAAGAGCTTCAAAATATTGAGCAACAACTTGATTCTGCGCTCAAGCATGTAAGAACCAGGAAGAACCAACTCATGCATGAATCCATTTCAGATCTTCAGAAAAAGGACAAGGCGCTTCAGGACCAAAACAACATGTTAGCCAAGAAGATAAGGGAGAAGGAGAAAGCACAAGCTCAAAATCCACAAATGGAGCAGCACCATCAGCAGCATAGCCATGCCATTGAACCTTCTCCACTACTTCTTCCTCAGCCATTCCTATCTCTTAACATGCCTTGTCCTTACCCAACACACGCCACCGGACACGAAGAATCCGCCGCCAACCACGACAGATCCGGCACCCTCCTGCCGCCCTGGATGCTCGGCCACCACCTTGGTAACTGAAATCATATAGCACTACCTAATTCTTTTGCTGTATGGACCCCTTTTGGATAATGGATGCTTGTGAAAGTTGTAGCTTTTTTAGTAAGTAATTTTCAGAAAAGGGTATAATGAGCTAAGAAGCATGGCTGGCTTGTGGGTTCCAAAATTAGACCTTTTTATAGAATAAGGCACACAGTGACATATGATTGTATATAGATGTGTAAATGGCAGCCACTAACTAACTTTAGTACTCTAATTTTCCAACATCTCTCCCCCTTCTTGTCTGTTTTAGTTCGTTACGTATCGATATCAGTCTCACGATTATAAAATGCATATGTTAAGGAGAGGTTTCTATGTCTTTATTATAAGAAATGCTTCGTCCCCCTCTCCAACCAATATGAGATCTCAC ATGGGGAGGGGAAGAGTGCAGTTGAAGAGGATTGAGAACAAGATTAATATGCAAGTGACCTTCTCCAAGAGAAGGTCTGGTCTGCTGAAGAAAGCTCATGAGATTTCAGTTCTGTGCGATGCTGAGGTTGCTCTTATCGTCTTCTCCACCAAGGGCAAGCTGTTTGAATACTCCACTGATTCTTGCATGGAGAAGATCCTCGAGCGTTATGAGAGGTACTCATACGCAGAGAGGCGGCTCATTGCAAATGATAGCCAATCAAACGGAAATTGGACTCTTGAATATGCGAAGCTTAAAGCCAGAATAGAGGTTCTTCAGAAGAACCACAGGCATTTCATGGGGGAAGATCTTGAGTCCTTGAGCCTAAAAGAGCTTCAAAATATTGAGCAACAACTTGATTCTGCGCTCAAGCATGTAAGAACCAGGAAGAACCAACTCATGCATGAATCCATTTCAGATCTTCAGAAAAAGGACAAGGCGCTTCAGGACCAAAACAACATGTTAGCCAAGAAGATAAGGGAGAAGGAGAAAGCACAAGCTCAAAATCCACAAATGGAGCAGCACCATCAGCAGCATAGCCATGCCATTGAACCTTCTCCACTACTTCTTCCTCAGCCATTCCTATCTCTTAACATGCCTTGTCCTTACCCAACACACGCCACCGGACACGAAGAATCCGCCGCCAACCACGACAGATCCGGCACCCTCCTGCCGCCCTGGATGCTCGGCCACCACCTTGGTAACTGA MGRGRVQLKRIENKINMQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMEKILERYERYSYAERRLIANDSQSNGNWTLEYAKLKARIEVLQKNHRHFMGEDLESLSLKELQNIEQQLDSALKHVRTRKNQLMHESISDLQKKDKALQDQNNMLAKKIREKEKAQAQNPQMEQHHQQHSHAIEPSPLLLPQPFLSLNMPCPYPTHATGHEESAANHDRSGTLLPPWMLGHHLGN Homology
BLAST of CmoCh13G011030 vs. ExPASy Swiss-Prot
Match: Q6E6S7 (Agamous-like MADS-box protein AP1 OS=Vitis vinifera OX=29760 GN=AP1 PE=2 SV=1) HSP 1 Score: 308.1 bits (788), Expect = 8.8e-83 Identity = 163/222 (73.42%), Postives = 191/222 (86.04%), Query Frame = 0
BLAST of CmoCh13G011030 vs. ExPASy Swiss-Prot
Match: Q42429 (Agamous-like MADS-box protein AGL8 homolog OS=Solanum tuberosum OX=4113 PE=2 SV=1) HSP 1 Score: 297.0 bits (759), Expect = 2.0e-79 Identity = 160/251 (63.75%), Postives = 193/251 (76.89%), Query Frame = 0
BLAST of CmoCh13G011030 vs. ExPASy Swiss-Prot
Match: D7SMN6 (Agamous-like MADS-box protein FUL-L OS=Vitis vinifera OX=29760 GN=FULL PE=2 SV=1) HSP 1 Score: 289.7 bits (740), Expect = 3.2e-77 Identity = 161/249 (64.66%), Postives = 193/249 (77.51%), Query Frame = 0
BLAST of CmoCh13G011030 vs. ExPASy Swiss-Prot
Match: Q41276 (Floral homeotic protein APETALA 1 OS=Sinapis alba OX=3728 GN=AP1 PE=2 SV=1) HSP 1 Score: 286.6 bits (732), Expect = 2.7e-76 Identity = 146/217 (67.28%), Postives = 187/217 (86.18%), Query Frame = 0
BLAST of CmoCh13G011030 vs. ExPASy Swiss-Prot
Match: O22328 (Agamous-like MADS-box protein AGL8 homolog OS=Solanum commersonii OX=4109 GN=SCM1 PE=2 SV=1) HSP 1 Score: 284.3 bits (726), Expect = 1.4e-75 Identity = 158/251 (62.95%), Postives = 190/251 (75.70%), Query Frame = 0
BLAST of CmoCh13G011030 vs. ExPASy TrEMBL
Match: A0A6J1ECD0 (truncated transcription factor CAULIFLOWER A-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111431275 PE=4 SV=1) HSP 1 Score: 487.3 bits (1253), Expect = 3.9e-134 Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 0
BLAST of CmoCh13G011030 vs. ExPASy TrEMBL
Match: A0A6J1KM19 (truncated transcription factor CAULIFLOWER A-like OS=Cucurbita maxima OX=3661 GN=LOC111495402 PE=4 SV=1) HSP 1 Score: 469.9 bits (1208), Expect = 6.4e-129 Identity = 242/248 (97.58%), Postives = 243/248 (97.98%), Query Frame = 0
BLAST of CmoCh13G011030 vs. ExPASy TrEMBL
Match: A0A6J1CAP1 (truncated transcription factor CAULIFLOWER A OS=Momordica charantia OX=3673 GN=LOC111008985 PE=4 SV=1) HSP 1 Score: 421.0 bits (1081), Expect = 3.4e-114 Identity = 217/248 (87.50%), Postives = 231/248 (93.15%), Query Frame = 0
BLAST of CmoCh13G011030 vs. ExPASy TrEMBL
Match: A0A1S3BWY5 (truncated transcription factor CAULIFLOWER A isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494248 PE=4 SV=1) HSP 1 Score: 409.1 bits (1050), Expect = 1.3e-110 Identity = 210/248 (84.68%), Postives = 224/248 (90.32%), Query Frame = 0
BLAST of CmoCh13G011030 vs. ExPASy TrEMBL
Match: A0A6J1K336 (truncated transcription factor CAULIFLOWER A-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111490222 PE=4 SV=1) HSP 1 Score: 402.1 bits (1032), Expect = 1.6e-108 Identity = 210/248 (84.68%), Postives = 228/248 (91.94%), Query Frame = 0
BLAST of CmoCh13G011030 vs. NCBI nr
Match: XP_022923620.1 (truncated transcription factor CAULIFLOWER A-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 487.3 bits (1253), Expect = 8.0e-134 Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 0
BLAST of CmoCh13G011030 vs. NCBI nr
Match: XP_023519051.1 (truncated transcription factor CAULIFLOWER A-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 478.8 bits (1231), Expect = 2.9e-131 Identity = 243/248 (97.98%), Postives = 245/248 (98.79%), Query Frame = 0
BLAST of CmoCh13G011030 vs. NCBI nr
Match: KAG6584393.1 (Agamous-like MADS-box protein AP1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 474.9 bits (1221), Expect = 4.1e-130 Identity = 242/246 (98.37%), Postives = 243/246 (98.78%), Query Frame = 0
BLAST of CmoCh13G011030 vs. NCBI nr
Match: XP_023001194.1 (truncated transcription factor CAULIFLOWER A-like [Cucurbita maxima]) HSP 1 Score: 469.9 bits (1208), Expect = 1.3e-128 Identity = 242/248 (97.58%), Postives = 243/248 (97.98%), Query Frame = 0
BLAST of CmoCh13G011030 vs. NCBI nr
Match: XP_038893559.1 (truncated transcription factor CAULIFLOWER A [Benincasa hispida]) HSP 1 Score: 429.9 bits (1104), Expect = 1.5e-116 Identity = 222/248 (89.52%), Postives = 235/248 (94.76%), Query Frame = 0
BLAST of CmoCh13G011030 vs. TAIR 10
Match: AT1G69120.1 (K-box region and MADS-box transcription factor family protein ) HSP 1 Score: 283.5 bits (724), Expect = 1.6e-76 Identity = 148/219 (67.58%), Postives = 188/219 (85.84%), Query Frame = 0
BLAST of CmoCh13G011030 vs. TAIR 10
Match: AT5G60910.1 (AGAMOUS-like 8 ) HSP 1 Score: 272.7 bits (696), Expect = 2.9e-73 Identity = 154/242 (63.64%), Postives = 186/242 (76.86%), Query Frame = 0
BLAST of CmoCh13G011030 vs. TAIR 10
Match: AT1G26310.1 (K-box region and MADS-box transcription factor family protein ) HSP 1 Score: 257.3 bits (656), Expect = 1.3e-68 Identity = 134/219 (61.19%), Postives = 180/219 (82.19%), Query Frame = 0
BLAST of CmoCh13G011030 vs. TAIR 10
Match: AT3G30260.1 (AGAMOUS-like 79 ) HSP 1 Score: 196.4 bits (498), Expect = 2.6e-50 Identity = 116/212 (54.72%), Postives = 145/212 (68.40%), Query Frame = 0
BLAST of CmoCh13G011030 vs. TAIR 10
Match: AT5G15800.1 (K-box region and MADS-box transcription factor family protein ) HSP 1 Score: 171.8 bits (434), Expect = 7.0e-43 Identity = 94/172 (54.65%), Postives = 125/172 (72.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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