CmoCh13G010080 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CACTCCCCTTTGTTCAGCTCTCATTTTCTCTCTCTAACCCTTCAAAATTCCTTCCTTTTTTTTTTCTCTATCTAACCTAATCTCTCTCTATTTCACTTAACCCTTCTTTACTTTCTCTCTCCTCTTTCTCTCTCCTCTTTTTCTCCTCTCATCATCTTCTTCTTCTTGTTCATCTTGTTCTTTCTTCGTATCACAAAAACCTAACAAAACCCACATCGAAAGCCCTCAGCTTTTGCAATTTAAAGATGTTGGAGAAGGGCATTCTTGTTCCTGATCTATCTCTTCAAATTAGCCCTCCCATAACTGATCCATCTTCTTCATTTCATATTTGGAAGCAACCTCAAGTACCTCAAGTTGACACCGAGCTTTCTCTCTCGAACAATTCGACAGTGGCGGTCGATGTTTCCCCGGATCGGTTCCAACCCATTAGAGGAATCCCACTTTACAGTAATGGGTTGTTGTCTTCTTCTACATATTTGAACCAAAACCAACCGTCGCCATCTCCGTCGTCGTCGTCGTCGTCGTCGCTGCAGCTTCCTTTGAATTCTAGGGCGTTTCATCAACAGCCTCCTGTTGGGAGGTATAATGGGATAACAATGGAGGCTTTGAGAAATCACCAGCAGAATCAGAATCAGTTTGGTTTTCACAATCATCAAAGCCCTCAATTTGGGGTTTCGGATTTTTCTTGTAATAATAGATCGAGATTGTTCATGCCAAGGATTCAAAGCCGACGAAATGCTAGGGCTCCTAGGATGCGTTGGACTTCCTCTCTTCATGCTCGTTTCATTCGTGCTGTTGAGCTCCTTGGCGGCCATGAAAGTATTCTCTCATTCCATCTCCTTTTTTTCTTTCTCCTCTCCATCTCGTTCTCGCTCGAATTTGATGACATTAGCCATATGTATTACGATAATTAGTGTCTTATCTACTTATTCATAGATCGAACTCCGATAAATTTGATTGTTTTTACACGATCAGGGGCAACTCCAAAGTCAGTGCTGGAGCTAATGGATGTGAAGGATCTCACTCTAGCTCATGTGAAGAGCCATTTACAGGTAATTTCATTGAAAACCCACAATTTATTTCAGGATTTTAATTGAAACCCACGATTTATCTCAGGATTTTAATCGAAACCCACAACTTATTTTAGGATTTTAATCGAAACCCACAATTTATTTCAGGATTTTAAATGAAACCCACAATTTATTTCAGGATTTTAATCGAAACCCACAATTTATTTCAGGATTTTAATCGATACCCACAATTTGTTTCAGGATTTTAATCGAAACCCACAATTTATTTCAGGATTTTAAACGAAACCCATTTGATATCTCTCCTTCTTCCCTGCAAAAAAGCTTCTTTTTTTTTTGGGTTCTCTCTTTCTCTCTCTATCTCAGTGAAGAGGAATCCCTGTGGCACAGTTACCAAAGAAGAGAGAAATGAATGAAAATGAAATGAATGAATGAATGATTCAGAAGCTGAAGAAAGTGTGTATTTAGTTCACAAAACAGGACAATTTCTTGTTTTAGAGAGAGAAAGAGAAAGAAGAGAGAGAGAAAATGGCATCATTTCTCAATAATAGAACCATTTCCCCAAATTTACTTTCCACACCAAACAAAAACAATACAAATCCCCATTTCAAAGCCTCTTCTACTTCACTTTATTTTAGAGTTCCATAATAACCAAATCATTTCATTTCACCTCTCATTTCCAAATGGGTCACTCAAAAAGTTTTGATCTTTACATGTTTGGTAATTTTCATTATTCAGACACAAAACCACACATGTTTTTCTCTTTCTTTTGTTCTTAACCCTTTTCTTGTCTTCTTTTTCAGATGTATCGTACTGTTAAAAACACCGACAAACAAACAGCTTCTTCTGGTAACAAACTCCAAATCCTTACCAATCTCAAAACAAATTCTTCTTAACCCTTAATTAAACAACATAATGCATCATTTTCTAGGTTTCAAACAACCTAGGAAACATGTTTGCCTTAAAAATAATCCTCAAAATTTGATGGGTTTTTTCTTAATGGATGAACTATGAATCAGAAGGGTCTGGGGAAGAAGATTTCTTGCCTGCAACGCCAACCCCACACCATGAAGCGAGCTGTTTGCTCAATCATAGAAGAGGGTTTAGTGCATCTTTGGAGGCTGATGTTAATGGATCAGCACCTTCCATTAATAACCACTGTAACTCTTCAAGGTTAATAATCTCTCTCTCTCTCTCTACATTAATTTTTGTTGGTCTTTTATGTCTGTTGGGTTAGTACTATATGTTTTTTTTTATTGGGTTGGTAAAAAAAATTCAAATTTTCTATAAAGAGCTACCCTTTGTTGTGACAGCTTTACTTTCCCTCATTTCCTTTTTTTTCTCTTACCACTTTTCTTTGAACCCCTTTGACTAAATTTTGATGTTCCTTCATTATGTTTGTGATTTGTAAACAGTTTTGTGTTTGATTTGTGTAAAAAGTTAGTGGGTAGCATGAAATTGTAGCTTTCCTAGCTCCTATAGGTTTAATGTAGCCTTTTCAGTGTCATTTCCGAGCTAATAATCTAACAATCCAAGTCCATCGCTAGCAGATATTGTCCGCTCTGACCGGTTACGTATCGTCGTCAGCCTTACAGTTTTAAAACATATCTGCTAGGAAGAGGTTTCTACACCCTTGTAAAAGAATGTTTTGTTTCCCTCTCCAACCGATGTATGGTCTCATAATCCATCCTCTTTGGGAGCCCAACGTCCTCGCCGACACACCGCCCGACATCTAGCTCTGATAACATTTATAACACCTCAAACCGACCACTAGCAGATATTGTCTTCTTTGACTCGTTTGCTGAACTCAACCAAAAACTAGTGTCTTAGCTACCGTGTCAATATTATCAACCAGTAGTGGACTGTGACTGTTACAAATAATGCACTAATAACTATCATCTTAAAGGTTAAAGGTCAACGGTTTCAAATCGTCCCCCCTACCTTTGTTGAACTCTACCAAAAATTAACTCATCTCATAGAAGAAGTGGCATAGCAGAAGTGCAGTCTTTTGCTAGGCCATTTCCTTTTAAATTAATGATAAATCAGCTTTAATATATAGTCTCACATGCTAGCATTACCCAAACAGAAAAGCATAGGTTAAGAAATTTGGGTTTCATTTACTGTATACTTATACTATAATATAAATTATTATATTCAAATGCTTCATTATCATCACATTAATTTAATGTTTCAGAAGAGCATGGGAGCAAGCCTCTCCAACAAGAGCTAATATGTTTGGATCAGAAAATCAACCACAGGTATAAACTCTTTCAATTCTATATTTCATGTAATTTACTCCGTATATCATATGATAAGTCAAACAAGCTCGATTTGAATCATTGTACTAAGAATCACGAACCTCCACAATGGTATGACAAAATACCTCGTACCAATGAAAATAGTGTTGTCGTGGGATTATGTCTCTCAATAACCCTAAACCGTTTAATTTTTTTTTTCCAGGAATGCTATGAATTAGGTCATCCGGGGTTGAATCTAAACGACAGTCCAAGCAAGGATTTGTGTTCGAGACACAATTGGGACAACTAAATCCAACCTTAAAACCTCATTTAATTTCTTT CACTCCCCTTTGTTCAGCTCTCATTTTCTCTCTCTAACCCTTCAAAATTCCTTCCTTTTTTTTTTCTCTATCTAACCTAATCTCTCTCTATTTCACTTAACCCTTCTTTACTTTCTCTCTCCTCTTTCTCTCTCCTCTTTTTCTCCTCTCATCATCTTCTTCTTCTTGTTCATCTTGTTCTTTCTTCGTATCACAAAAACCTAACAAAACCCACATCGAAAGCCCTCAGCTTTTGCAATTTAAAGATGTTGGAGAAGGGCATTCTTGTTCCTGATCTATCTCTTCAAATTAGCCCTCCCATAACTGATCCATCTTCTTCATTTCATATTTGGAAGCAACCTCAAGTACCTCAAGTTGACACCGAGCTTTCTCTCTCGAACAATTCGACAGTGGCGGTCGATGTTTCCCCGGATCGGTTCCAACCCATTAGAGGAATCCCACTTTACAGTAATGGGTTGTTGTCTTCTTCTACATATTTGAACCAAAACCAACCGTCGCCATCTCCGTCGTCGTCGTCGTCGTCGTCGCTGCAGCTTCCTTTGAATTCTAGGGCGTTTCATCAACAGCCTCCTGTTGGGAGGTATAATGGGATAACAATGGAGGCTTTGAGAAATCACCAGCAGAATCAGAATCAGTTTGGTTTTCACAATCATCAAAGCCCTCAATTTGGGGTTTCGGATTTTTCTTGTAATAATAGATCGAGATTGTTCATGCCAAGGATTCAAAGCCGACGAAATGCTAGGGCTCCTAGGATGCGTTGGACTTCCTCTCTTCATGCTCGTTTCATTCGTGCTGTTGAGCTCCTTGGCGGCCATGAAAGGGCAACTCCAAAGTCAGTGCTGGAGCTAATGGATGTGAAGGATCTCACTCTAGCTCATGTGAAGAGCCATTTACAGATGTATCGTACTGTTAAAAACACCGACAAACAAACAGCTTCTTCTGAAGGGTCTGGGGAAGAAGATTTCTTGCCTGCAACGCCAACCCCACACCATGAAGCGAGCTGTTTGCTCAATCATAGAAGAGGGTTTAGTGCATCTTTGGAGGCTGATGTTAATGGATCAGCACCTTCCATTAATAACCACTGTAACTCTTCAAGAAGAGCATGGGAGCAAGCCTCTCCAACAAGAGCTAATATGTTTGGATCAGAAAATCAACCACAGGAATGCTATGAATTAGGTCATCCGGGGTTGAATCTAAACGACAGTCCAAGCAAGGATTTGTGTTCGAGACACAATTGGGACAACTAAATCCAACCTTAAAACCTCATTTAATTTCTTT ATGTTGGAGAAGGGCATTCTTGTTCCTGATCTATCTCTTCAAATTAGCCCTCCCATAACTGATCCATCTTCTTCATTTCATATTTGGAAGCAACCTCAAGTACCTCAAGTTGACACCGAGCTTTCTCTCTCGAACAATTCGACAGTGGCGGTCGATGTTTCCCCGGATCGGTTCCAACCCATTAGAGGAATCCCACTTTACAGTAATGGGTTGTTGTCTTCTTCTACATATTTGAACCAAAACCAACCGTCGCCATCTCCGTCGTCGTCGTCGTCGTCGTCGCTGCAGCTTCCTTTGAATTCTAGGGCGTTTCATCAACAGCCTCCTGTTGGGAGGTATAATGGGATAACAATGGAGGCTTTGAGAAATCACCAGCAGAATCAGAATCAGTTTGGTTTTCACAATCATCAAAGCCCTCAATTTGGGGTTTCGGATTTTTCTTGTAATAATAGATCGAGATTGTTCATGCCAAGGATTCAAAGCCGACGAAATGCTAGGGCTCCTAGGATGCGTTGGACTTCCTCTCTTCATGCTCGTTTCATTCGTGCTGTTGAGCTCCTTGGCGGCCATGAAAGGGCAACTCCAAAGTCAGTGCTGGAGCTAATGGATGTGAAGGATCTCACTCTAGCTCATGTGAAGAGCCATTTACAGATGTATCGTACTGTTAAAAACACCGACAAACAAACAGCTTCTTCTGAAGGGTCTGGGGAAGAAGATTTCTTGCCTGCAACGCCAACCCCACACCATGAAGCGAGCTGTTTGCTCAATCATAGAAGAGGGTTTAGTGCATCTTTGGAGGCTGATGTTAATGGATCAGCACCTTCCATTAATAACCACTGTAACTCTTCAAGAAGAGCATGGGAGCAAGCCTCTCCAACAAGAGCTAATATGTTTGGATCAGAAAATCAACCACAGGAATGCTATGAATTAGGTCATCCGGGGTTGAATCTAAACGACAGTCCAAGCAAGGATTTGTGTTCGAGACACAATTGGGACAACTAA MLEKGILVPDLSLQISPPITDPSSSFHIWKQPQVPQVDTELSLSNNSTVAVDVSPDRFQPIRGIPLYSNGLLSSSTYLNQNQPSPSPSSSSSSSLQLPLNSRAFHQQPPVGRYNGITMEALRNHQQNQNQFGFHNHQSPQFGVSDFSCNNRSRLFMPRIQSRRNARAPRMRWTSSLHARFIRAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKNTDKQTASSEGSGEEDFLPATPTPHHEASCLLNHRRGFSASLEADVNGSAPSINNHCNSSRRAWEQASPTRANMFGSENQPQECYELGHPGLNLNDSPSKDLCSRHNWDN Homology
BLAST of CmoCh13G010080 vs. ExPASy Swiss-Prot
Match: Q93WJ9 (Transcription repressor KAN1 OS=Arabidopsis thaliana OX=3702 GN=KAN1 PE=1 SV=1) HSP 1 Score: 159.5 bits (402), Expect = 6.8e-38 Identity = 110/244 (45.08%), Postives = 139/244 (56.97%), Query Frame = 0
BLAST of CmoCh13G010080 vs. ExPASy Swiss-Prot
Match: Q0J235 (Probable transcription factor RL9 OS=Oryza sativa subsp. japonica OX=39947 GN=RL9 PE=2 SV=2) HSP 1 Score: 139.0 bits (349), Expect = 9.5e-32 Identity = 103/227 (45.37%), Postives = 126/227 (55.51%), Query Frame = 0
BLAST of CmoCh13G010080 vs. ExPASy Swiss-Prot
Match: Q9C616 (Probable transcription factor KAN2 OS=Arabidopsis thaliana OX=3702 GN=KAN2 PE=2 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 3.6e-31 Identity = 104/274 (37.96%), Postives = 135/274 (49.27%), Query Frame = 0
BLAST of CmoCh13G010080 vs. ExPASy Swiss-Prot
Match: Q941I2 (Probable transcription factor KAN3 OS=Arabidopsis thaliana OX=3702 GN=KAN3 PE=2 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 2.4e-27 Identity = 85/182 (46.70%), Postives = 102/182 (56.04%), Query Frame = 0
BLAST of CmoCh13G010080 vs. ExPASy Swiss-Prot
Match: Q9FJV5 (Probable transcription factor KAN4 OS=Arabidopsis thaliana OX=3702 GN=KAN4 PE=1 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 1.3e-25 Identity = 77/152 (50.66%), Postives = 95/152 (62.50%), Query Frame = 0
BLAST of CmoCh13G010080 vs. ExPASy TrEMBL
Match: A0A6J1E6V5 (transcription repressor KAN1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111431329 PE=4 SV=1) HSP 1 Score: 671.0 bits (1730), Expect = 2.6e-189 Identity = 333/333 (100.00%), Postives = 333/333 (100.00%), Query Frame = 0
BLAST of CmoCh13G010080 vs. ExPASy TrEMBL
Match: A0A6J1E751 (transcription repressor KAN1-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111431329 PE=4 SV=1) HSP 1 Score: 664.8 bits (1714), Expect = 1.8e-187 Identity = 332/333 (99.70%), Postives = 332/333 (99.70%), Query Frame = 0
BLAST of CmoCh13G010080 vs. ExPASy TrEMBL
Match: A0A6J1EAC8 (transcription repressor KAN1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111431329 PE=4 SV=1) HSP 1 Score: 664.5 bits (1713), Expect = 2.4e-187 Identity = 332/333 (99.70%), Postives = 332/333 (99.70%), Query Frame = 0
BLAST of CmoCh13G010080 vs. ExPASy TrEMBL
Match: A0A6J1KJM5 (transcription repressor KAN1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111495831 PE=4 SV=1) HSP 1 Score: 636.0 bits (1639), Expect = 9.1e-179 Identity = 321/337 (95.25%), Postives = 324/337 (96.14%), Query Frame = 0
BLAST of CmoCh13G010080 vs. ExPASy TrEMBL
Match: A0A6J1KRL3 (transcription repressor KAN1-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111495831 PE=4 SV=1) HSP 1 Score: 629.8 bits (1623), Expect = 6.5e-177 Identity = 320/337 (94.96%), Postives = 323/337 (95.85%), Query Frame = 0
BLAST of CmoCh13G010080 vs. NCBI nr
Match: XP_022923697.1 (transcription repressor KAN1-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 671.0 bits (1730), Expect = 5.3e-189 Identity = 333/333 (100.00%), Postives = 333/333 (100.00%), Query Frame = 0
BLAST of CmoCh13G010080 vs. NCBI nr
Match: XP_022923699.1 (transcription repressor KAN1-like isoform X3 [Cucurbita moschata]) HSP 1 Score: 664.8 bits (1714), Expect = 3.8e-187 Identity = 332/333 (99.70%), Postives = 332/333 (99.70%), Query Frame = 0
BLAST of CmoCh13G010080 vs. NCBI nr
Match: XP_022923698.1 (transcription repressor KAN1-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 664.5 bits (1713), Expect = 4.9e-187 Identity = 332/333 (99.70%), Postives = 332/333 (99.70%), Query Frame = 0
BLAST of CmoCh13G010080 vs. NCBI nr
Match: XP_023001796.1 (transcription repressor KAN1-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 636.0 bits (1639), Expect = 1.9e-178 Identity = 321/337 (95.25%), Postives = 324/337 (96.14%), Query Frame = 0
BLAST of CmoCh13G010080 vs. NCBI nr
Match: XP_023519228.1 (transcription repressor KAN1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 635.6 bits (1638), Expect = 2.5e-178 Identity = 317/333 (95.20%), Postives = 321/333 (96.40%), Query Frame = 0
BLAST of CmoCh13G010080 vs. TAIR 10
Match: AT5G16560.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 159.5 bits (402), Expect = 4.8e-39 Identity = 110/244 (45.08%), Postives = 139/244 (56.97%), Query Frame = 0
BLAST of CmoCh13G010080 vs. TAIR 10
Match: AT1G32240.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 137.1 bits (344), Expect = 2.6e-32 Identity = 104/274 (37.96%), Postives = 135/274 (49.27%), Query Frame = 0
BLAST of CmoCh13G010080 vs. TAIR 10
Match: AT4G17695.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 124.4 bits (311), Expect = 1.7e-28 Identity = 85/182 (46.70%), Postives = 102/182 (56.04%), Query Frame = 0
BLAST of CmoCh13G010080 vs. TAIR 10
Match: AT5G42630.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 118.6 bits (296), Expect = 9.4e-27 Identity = 77/152 (50.66%), Postives = 95/152 (62.50%), Query Frame = 0
BLAST of CmoCh13G010080 vs. TAIR 10
Match: AT5G42630.2 (Homeodomain-like superfamily protein ) HSP 1 Score: 118.6 bits (296), Expect = 9.4e-27 Identity = 77/152 (50.66%), Postives = 95/152 (62.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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