CmoCh13G009670 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh13G009670
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	glucuronoxylan 4-O-methyltransferase 1-like
Location	Cmo_Chr13: 8354979 .. 8356377 (+)
RNA-Seq Expression	CmoCh13G009670
Synteny	CmoCh13G009670

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTGAATTAATTTGAAATTAATAATGATAATGTAATGTAATGTACCATAAAAATGAGGATATTTAATGAAGTGTGTACCTAAAACATTGCTTTATTTAAATCCATAAAGTATCAAACAAGATAAGAACACATAGAAATTAAAGCCCATTTTATATAATTTCCCTAGAGCACTAACTCATTGTCTCAATTATTTCATTCAATTCAAATATCTACGATCTACCCATAATTATTTGGTCGGTTTTACTCGAAAAAGGAGAGTATTGAATTAGAGAATTAAATTTATGTGAGATCCCACAATAATTGGGGAGTTTAACGATGCAATGGGTCAAAACGGACACTATCTGCTAGTGGTGAATTTGGACGATTACAAATAGTATAAGAGCTAGACATTGAGCGATGTACCAACATTTCGTGTGAAAATCTCTCCCTAAAAGACGTGTTTTAAAATCGTGAAGTTGACGGCAATGATCGCACTTGGAAGATTCACACGCCCAATCGAGCTACACAAATTTCCTCTGTCCCTGTGATGAAAAAAAGAACTCATGAGGGAGATCCACACCAACCATCAAGAGCATTACAACCTATGTTGCTTCATTCAATGATATTAGCTGATTTCTTGTCACAATCCCCAACCAAAATCTCAACTATTTCCCTCCTCTCTTCCACTCTAAGCTATGCAAAAGGATTGAAATTTGTGATTGAATCACCAACCCCTTTAATACCCATTTTCCAAATCCCAAACCCACTTCACTTCAACAAAGAATGAGGCATAAAACACACCCTATTCATCAATTTCTCAACCTCAAAACCCTTCTTTTACCTCTATTTCTTTCATTTTTCCTCATCTTCCTTATCAAAGCTAACATCTTTGACTCACCCACACAAAACCCATCTTCAAAGTTGCAATCTTTTTCACCAAAAACCACAAAAAATTGCTCCCCATCTTCTTTCAACAACATCCCTTGCTCATTTTCCCACGCCCTTATCCACGGTGTGTCAGTTGGCGCTTAAGGGACTGCCAGAGGAAGTGTATGAGGTGGATGCACCGACAGGGTACTACGACGAGGCACCAGGGAGGATGACGGTGATTTATACGACGGGGATGATGGCGAGGAATAGGGAGGAAGGGGAAATTACGGACTTGTTTGTGCATGATGCGAATAGGGAAGTGGAAGATAAGTTTTCGATGGAGTTCTTGTGTGAAGGTTATATGGAGCCTTCGAACGAAGTACATTATAGAGCCTCTCCTAAGATCTATGGAGCCCTCGAACAATCTTCCGTTAATCGAGGCTCAACTCCTTCTCTAGAGCCCTTGAACAAAGTACCCCTTTGTTTAACACTTAAGTCACTTTTAACTACACCTTCGAGTCTCACTTCTTTGTTCAAATTGAGATAG

mRNA sequence

ATGCTAACATCTTTGACTCACCCACACAAAACCCATCTTCAAAGTTGCAATCTTTTTCACCAAAAACCACAAAAAATTGCTCCCCATCTTCTTTCAACAACATCCCTTGCTCATTTTCCCACGCCCTTATCCACGGTGTGTCAGTTGGCGCTTAAGGGACTGCCAGAGGAAGTGTATGAGGTGGATGCACCGACAGGGTACTACGACGAGGCACCAGGGAGGATGACGGTGATTTATACGACGGGGATGATGGCGAGGAATAGGGAGGAAGGGGAAATTACGGACTTGTTTGTGCATGATGCGAATAGGGAAGTGGAAGATAAGTTTTCGATGGAGTTCTTGTGTGAAGGTTATATGGAGCCTTCGAACGAAGTACATTATAGAGCCTCTCCTAAGATCTATGGAGCCCTCGAACAATCTTCCGTTAATCGAGGCTCAACTCCTTCTCTAGAGCCCTTGAACAAAGTACCCCTTTGTTTAACACTTAAGTCACTTTTAACTACACCTTCGAGTCTCACTTCTTTGTTCAAATTGAGATAG

Coding sequence (CDS)

ATGCTAACATCTTTGACTCACCCACACAAAACCCATCTTCAAAGTTGCAATCTTTTTCACCAAAAACCACAAAAAATTGCTCCCCATCTTCTTTCAACAACATCCCTTGCTCATTTTCCCACGCCCTTATCCACGGTGTGTCAGTTGGCGCTTAAGGGACTGCCAGAGGAAGTGTATGAGGTGGATGCACCGACAGGGTACTACGACGAGGCACCAGGGAGGATGACGGTGATTTATACGACGGGGATGATGGCGAGGAATAGGGAGGAAGGGGAAATTACGGACTTGTTTGTGCATGATGCGAATAGGGAAGTGGAAGATAAGTTTTCGATGGAGTTCTTGTGTGAAGGTTATATGGAGCCTTCGAACGAAGTACATTATAGAGCCTCTCCTAAGATCTATGGAGCCCTCGAACAATCTTCCGTTAATCGAGGCTCAACTCCTTCTCTAGAGCCCTTGAACAAAGTACCCCTTTGTTTAACACTTAAGTCACTTTTAACTACACCTTCGAGTCTCACTTCTTTGTTCAAATTGAGATAG

Protein sequence

MLTSLTHPHKTHLQSCNLFHQKPQKIAPHLLSTTSLAHFPTPLSTVCQLALKGLPEEVYEVDAPTGYYDEAPGRMTVIYTTGMMARNREEGEITDLFVHDANREVEDKFSMEFLCEGYMEPSNEVHYRASPKIYGALEQSSVNRGSTPSLEPLNKVPLCLTLKSLLTTPSSLTSLFKLR

Homology

[Close]

BLAST of CmoCh13G009670 vs. ExPASy Swiss-Prot
Match: Q6NMK1 (Glucuronoxylan 4-O-methyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=GXM1 PE=1 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.2e-28
Identity = 61/86 (70.93%), Postives = 69/86 (80.23%), Query Frame = 0


Query: 42  PLSTVCQLALKGLPEEVYE-------VDAPTGYYDEAPGRMTVIYTTGMMARNREEGEIT 101
           P  ++CQLALKGLP E+YE       VDAPTGYYDEAPGRMT IYT GMMARNR++G  T
Sbjct: 169 PRYSMCQLALKGLPAEIYETGWDLIMVDAPTGYYDEAPGRMTAIYTAGMMARNRKQGGET 228

Query: 102 DLFVHDANREVEDKFSMEFLCEGYME 121
           D+FVHD NRE+EDKFS  FLCEGYM+
Sbjct: 229 DVFVHDVNREIEDKFSKAFLCEGYMK 254

[Close]

BLAST of CmoCh13G009670 vs. ExPASy Swiss-Prot
Match: Q9T0F7 (Glucuronoxylan 4-O-methyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=GXM2 PE=1 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 5.6e-23
Identity = 52/86 (60.47%), Postives = 64/86 (74.42%), Query Frame = 0


Query: 42  PLSTVCQLALKGLPEEVYE-------VDAPTGYYDEAPGRMTVIYTTGMMARNREEGEIT 101
           P  + C L+LKG P +VYE       VDAPTGY+DEAPGRM+ IYT G++ARNR +G  T
Sbjct: 174 PRDSKCALSLKGFPADVYETQWDVIMVDAPTGYHDEAPGRMSAIYTAGLLARNRYDGGET 233

Query: 102 DLFVHDANREVEDKFSMEFLCEGYME 121
           D+FVHD NR VED+FS+ FLC GYM+
Sbjct: 234 DVFVHDINRPVEDEFSVAFLCGGYMK 259

[Close]

BLAST of CmoCh13G009670 vs. ExPASy Swiss-Prot
Match: Q9LQ32 (Glucuronoxylan 4-O-methyltransferase 3 OS=Arabidopsis thaliana OX=3702 GN=GXM3 PE=1 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 5.6e-23
Identity = 53/89 (59.55%), Postives = 65/89 (73.03%), Query Frame = 0


Query: 42  PLSTVCQLALKGLPEEVYE-------VDAPTGYYDEAPGRMTVIYTTGMMARNREEGEIT 101
           P ++ C LALK  P + YE       VDAPTGY++EAPGRM+ IYT G++ARNRE+GE T
Sbjct: 182 PRNSKCDLALKDFPADFYETKWDLIMVDAPTGYHEEAPGRMSAIYTAGLLARNREDGE-T 241

Query: 102 DLFVHDANREVEDKFSMEFLCEGYMEPSN 124
           D+FVHD NR VED+FS  FLC+GYM   N
Sbjct: 242 DVFVHDVNRPVEDEFSATFLCKGYMREQN 269

[Close]

BLAST of CmoCh13G009670 vs. ExPASy Swiss-Prot
Match: Q9C7F9 (Probable methyltransferase At1g27930 OS=Arabidopsis thaliana OX=3702 GN=At1g27930 PE=1 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 2.3e-16
Identity = 41/79 (51.90%), Postives = 54/79 (68.35%), Query Frame = 0


Query: 47  CQLALKGLPEEVYE-------VDAPTGYYDEAPGRMTVIYTTGMMARNREEGEITDLFVH 106
           C+LAL GLP+E Y+       VDAP GY+ EAPGRM  I++  +MARNR++  +T +F+H
Sbjct: 181 CKLALTGLPDEFYDTEWDLLMVDAPKGYFAEAPGRMAAIFSAAVMARNRKKPGVTHVFLH 240

Query: 107 DANREVEDKFSMEFLCEGY 119
           D NR VE  F+ EFLC  Y
Sbjct: 241 DVNRRVEKTFAEEFLCRKY 259

[Close]

BLAST of CmoCh13G009670 vs. ExPASy Swiss-Prot
Match: Q9SNE5 (Protein IRREGULAR XYLEM 15 OS=Arabidopsis thaliana OX=3702 GN=IRX15 PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.0e-08
Identity = 37/91 (40.66%), Postives = 51/91 (56.04%), Query Frame = 0


Query: 47  CQLALKGLPEEVYE-------VDAPTGYYDEAPGRMTVIYTTGMMARNREEG-EITDLFV 106
           C+L L  LP  VY+       VD P G   E PGRM+ I+T  ++AR+++ G   T +FV
Sbjct: 207 CKLGLNDLPNHVYDVDWDVIFVDGPRGDAHEGPGRMSSIFTAAVLARSKKGGTPKTHVFV 266

Query: 107 HDANREVEDKFSMEFLCEGYMEPSNEV--HY 128
           HD  R+VE     EFLC   +  SN++  HY
Sbjct: 267 HDYYRDVERLCGDEFLCRENLVESNDLLAHY 297

[Close]

BLAST of CmoCh13G009670 vs. ExPASy TrEMBL
Match: A0A6J1JWG6 (glucuronoxylan 4-O-methyltransferase 1-like OS=Cucurbita maxima OX=3661 GN=LOC111490300 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 7.1e-29
Identity = 67/85 (78.82%), Postives = 71/85 (83.53%), Query Frame = 0


Query: 42  PLSTVCQLALKGLPEEVYE-------VDAPTGYYDEAPGRMTVIYTTGMMARNREEGEIT 101
           P  +VCQLA KGLPEEVY+       VDAPTGYYD+APGRMT IYT GMMARNREEG IT
Sbjct: 177 PKYSVCQLAQKGLPEEVYDMKWDLIMVDAPTGYYDDAPGRMTAIYTAGMMARNREEGGIT 236

Query: 102 DLFVHDANREVEDKFSMEFLCEGYM 120
           D+FVHD NREVEDKFSMEFLCEGYM
Sbjct: 237 DVFVHDVNREVEDKFSMEFLCEGYM 261

[Close]

BLAST of CmoCh13G009670 vs. ExPASy TrEMBL
Match: A0A6J1GSM4 (glucuronoxylan 4-O-methyltransferase 1-like OS=Cucurbita moschata OX=3662 GN=LOC111457072 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 7.1e-29
Identity = 67/85 (78.82%), Postives = 71/85 (83.53%), Query Frame = 0


Query: 42  PLSTVCQLALKGLPEEVYE-------VDAPTGYYDEAPGRMTVIYTTGMMARNREEGEIT 101
           P  +VCQLA KGLPEEVY+       VDAPTGYYD+APGRMT IYT GMMARNREEG IT
Sbjct: 177 PKYSVCQLAQKGLPEEVYDVKWDLIMVDAPTGYYDDAPGRMTAIYTAGMMARNREEGGIT 236

Query: 102 DLFVHDANREVEDKFSMEFLCEGYM 120
           D+FVHD NREVEDKFSMEFLCEGYM
Sbjct: 237 DVFVHDVNREVEDKFSMEFLCEGYM 261

[Close]

BLAST of CmoCh13G009670 vs. ExPASy TrEMBL
Match: A0A5D3BL62 (Glucuronoxylan 4-O-methyltransferase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G002990 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 1.3e-27
Identity = 65/85 (76.47%), Postives = 70/85 (82.35%), Query Frame = 0


Query: 42  PLSTVCQLALKGLPEEVYE-------VDAPTGYYDEAPGRMTVIYTTGMMARNREEGEIT 101
           P  +VC LA+KGLPEEVYE       VDAPTG++DEAPGRMT IYT GMMARNREEG  T
Sbjct: 34  PKYSVCPLAIKGLPEEVYEVKWDLIMVDAPTGFHDEAPGRMTAIYTAGMMARNREEGGST 93

Query: 102 DLFVHDANREVEDKFSMEFLCEGYM 120
           D+FVHD NREVEDKFSMEFLCEGYM
Sbjct: 94  DVFVHDVNREVEDKFSMEFLCEGYM 118

[Close]

BLAST of CmoCh13G009670 vs. ExPASy TrEMBL
Match: A0A0A0LTA4 (Polysacc_synt_4 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G044930 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 1.3e-27
Identity = 65/85 (76.47%), Postives = 70/85 (82.35%), Query Frame = 0


Query: 42  PLSTVCQLALKGLPEEVYE-------VDAPTGYYDEAPGRMTVIYTTGMMARNREEGEIT 101
           P  +VC LA+KGLPEEVYE       VDAPTG++DEAPGRMT IYT GMMARNREEG  T
Sbjct: 179 PKYSVCPLAIKGLPEEVYEVKWDLIMVDAPTGFHDEAPGRMTAIYTAGMMARNREEGGST 238

Query: 102 DLFVHDANREVEDKFSMEFLCEGYM 120
           D+FVHD NREVEDKFSMEFLCEGYM
Sbjct: 239 DVFVHDVNREVEDKFSMEFLCEGYM 263

[Close]

BLAST of CmoCh13G009670 vs. ExPASy TrEMBL
Match: A0A1S3ATM9 (glucuronoxylan 4-O-methyltransferase 1 OS=Cucumis melo OX=3656 GN=LOC103482841 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 1.3e-27
Identity = 65/85 (76.47%), Postives = 70/85 (82.35%), Query Frame = 0


Query: 42  PLSTVCQLALKGLPEEVYE-------VDAPTGYYDEAPGRMTVIYTTGMMARNREEGEIT 101
           P  +VC LA+KGLPEEVYE       VDAPTG++DEAPGRMT IYT GMMARNREEG  T
Sbjct: 178 PKYSVCPLAIKGLPEEVYEVKWDLIMVDAPTGFHDEAPGRMTAIYTAGMMARNREEGGST 237

Query: 102 DLFVHDANREVEDKFSMEFLCEGYM 120
           D+FVHD NREVEDKFSMEFLCEGYM
Sbjct: 238 DVFVHDVNREVEDKFSMEFLCEGYM 262

[Close]

BLAST of CmoCh13G009670 vs. NCBI nr
Match: XP_038895348.1 (glucuronoxylan 4-O-methyltransferase 1 [Benincasa hispida])

HSP 1 Score: 139.0 bits (349), Expect = 3.9e-29
Identity = 69/85 (81.18%), Postives = 71/85 (83.53%), Query Frame = 0


Query: 42  PLSTVCQLALKGLPEEVYE-------VDAPTGYYDEAPGRMTVIYTTGMMARNREEGEIT 101
           P  +VCQLALKGLPEEVYE       VDAPTGYY+EAPGRMT IYT GMMARNREEG  T
Sbjct: 180 PKYSVCQLALKGLPEEVYEVKWDLIMVDAPTGYYEEAPGRMTAIYTAGMMARNREEGGST 239

Query: 102 DLFVHDANREVEDKFSMEFLCEGYM 120
           DLFVHD NREVEDKFSMEFLCEGYM
Sbjct: 240 DLFVHDVNREVEDKFSMEFLCEGYM 264

[Close]

BLAST of CmoCh13G009670 vs. NCBI nr
Match: KAG7012196.1 (Glucuronoxylan 4-O-methyltransferase 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 137.1 bits (344), Expect = 1.5e-28
Identity = 67/85 (78.82%), Postives = 71/85 (83.53%), Query Frame = 0


Query: 42  PLSTVCQLALKGLPEEVYE-------VDAPTGYYDEAPGRMTVIYTTGMMARNREEGEIT 101
           P  +VCQLA KGLPEEVY+       VDAPTGYYD+APGRMT IYT GMMARNREEG IT
Sbjct: 147 PKYSVCQLAQKGLPEEVYDVKWDLIMVDAPTGYYDDAPGRMTAIYTAGMMARNREEGGIT 206

Query: 102 DLFVHDANREVEDKFSMEFLCEGYM 120
           D+FVHD NREVEDKFSMEFLCEGYM
Sbjct: 207 DVFVHDVNREVEDKFSMEFLCEGYM 231

[Close]

BLAST of CmoCh13G009670 vs. NCBI nr
Match: XP_022954973.1 (glucuronoxylan 4-O-methyltransferase 1-like [Cucurbita moschata])

HSP 1 Score: 137.1 bits (344), Expect = 1.5e-28
Identity = 67/85 (78.82%), Postives = 71/85 (83.53%), Query Frame = 0


Query: 42  PLSTVCQLALKGLPEEVYE-------VDAPTGYYDEAPGRMTVIYTTGMMARNREEGEIT 101
           P  +VCQLA KGLPEEVY+       VDAPTGYYD+APGRMT IYT GMMARNREEG IT
Sbjct: 177 PKYSVCQLAQKGLPEEVYDVKWDLIMVDAPTGYYDDAPGRMTAIYTAGMMARNREEGGIT 236

Query: 102 DLFVHDANREVEDKFSMEFLCEGYM 120
           D+FVHD NREVEDKFSMEFLCEGYM
Sbjct: 237 DVFVHDVNREVEDKFSMEFLCEGYM 261

[Close]

BLAST of CmoCh13G009670 vs. NCBI nr
Match: XP_022994652.1 (glucuronoxylan 4-O-methyltransferase 1-like [Cucurbita maxima])

HSP 1 Score: 137.1 bits (344), Expect = 1.5e-28
Identity = 67/85 (78.82%), Postives = 71/85 (83.53%), Query Frame = 0


Query: 42  PLSTVCQLALKGLPEEVYE-------VDAPTGYYDEAPGRMTVIYTTGMMARNREEGEIT 101
           P  +VCQLA KGLPEEVY+       VDAPTGYYD+APGRMT IYT GMMARNREEG IT
Sbjct: 177 PKYSVCQLAQKGLPEEVYDMKWDLIMVDAPTGYYDDAPGRMTAIYTAGMMARNREEGGIT 236

Query: 102 DLFVHDANREVEDKFSMEFLCEGYM 120
           D+FVHD NREVEDKFSMEFLCEGYM
Sbjct: 237 DVFVHDVNREVEDKFSMEFLCEGYM 261

[Close]

BLAST of CmoCh13G009670 vs. NCBI nr
Match: XP_023542198.1 (glucuronoxylan 4-O-methyltransferase 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 137.1 bits (344), Expect = 1.5e-28
Identity = 67/85 (78.82%), Postives = 71/85 (83.53%), Query Frame = 0


Query: 42  PLSTVCQLALKGLPEEVYE-------VDAPTGYYDEAPGRMTVIYTTGMMARNREEGEIT 101
           P  +VCQLA KGLPEEVY+       VDAPTGYYD+APGRMT IYT GMMARNREEG IT
Sbjct: 177 PKYSVCQLAQKGLPEEVYDVKWDLIMVDAPTGYYDDAPGRMTAIYTAGMMARNREEGGIT 236

Query: 102 DLFVHDANREVEDKFSMEFLCEGYM 120
           D+FVHD NREVEDKFSMEFLCEGYM
Sbjct: 237 DVFVHDVNREVEDKFSMEFLCEGYM 261

[Close]

BLAST of CmoCh13G009670 vs. TAIR 10
Match: AT1G09610.1 (Protein of unknown function (DUF579) )

HSP 1 Score: 127.9 bits (320), Expect = 8.3e-30
Identity = 61/86 (70.93%), Postives = 69/86 (80.23%), Query Frame = 0


Query: 42  PLSTVCQLALKGLPEEVYE-------VDAPTGYYDEAPGRMTVIYTTGMMARNREEGEIT 101
           P  ++CQLALKGLP E+YE       VDAPTGYYDEAPGRMT IYT GMMARNR++G  T
Sbjct: 169 PRYSMCQLALKGLPAEIYETGWDLIMVDAPTGYYDEAPGRMTAIYTAGMMARNRKQGGET 228

Query: 102 DLFVHDANREVEDKFSMEFLCEGYME 121
           D+FVHD NRE+EDKFS  FLCEGYM+
Sbjct: 229 DVFVHDVNREIEDKFSKAFLCEGYMK 254

[Close]

BLAST of CmoCh13G009670 vs. TAIR 10
Match: AT1G33800.1 (Protein of unknown function (DUF579) )

HSP 1 Score: 109.0 bits (271), Expect = 4.0e-24
Identity = 53/89 (59.55%), Postives = 65/89 (73.03%), Query Frame = 0


Query: 42  PLSTVCQLALKGLPEEVYE-------VDAPTGYYDEAPGRMTVIYTTGMMARNREEGEIT 101
           P ++ C LALK  P + YE       VDAPTGY++EAPGRM+ IYT G++ARNRE+GE T
Sbjct: 182 PRNSKCDLALKDFPADFYETKWDLIMVDAPTGYHEEAPGRMSAIYTAGLLARNREDGE-T 241

Query: 102 DLFVHDANREVEDKFSMEFLCEGYMEPSN 124
           D+FVHD NR VED+FS  FLC+GYM   N
Sbjct: 242 DVFVHDVNRPVEDEFSATFLCKGYMREQN 269

[Close]

BLAST of CmoCh13G009670 vs. TAIR 10
Match: AT4G09990.1 (Protein of unknown function (DUF579) )

HSP 1 Score: 109.0 bits (271), Expect = 4.0e-24
Identity = 52/86 (60.47%), Postives = 64/86 (74.42%), Query Frame = 0


Query: 42  PLSTVCQLALKGLPEEVYE-------VDAPTGYYDEAPGRMTVIYTTGMMARNREEGEIT 101
           P  + C L+LKG P +VYE       VDAPTGY+DEAPGRM+ IYT G++ARNR +G  T
Sbjct: 174 PRDSKCALSLKGFPADVYETQWDVIMVDAPTGYHDEAPGRMSAIYTAGLLARNRYDGGET 233

Query: 102 DLFVHDANREVEDKFSMEFLCEGYME 121
           D+FVHD NR VED+FS+ FLC GYM+
Sbjct: 234 DVFVHDINRPVEDEFSVAFLCGGYMK 259

[Close]

BLAST of CmoCh13G009670 vs. TAIR 10
Match: AT1G71690.1 (Protein of unknown function (DUF579) )

HSP 1 Score: 104.4 bits (259), Expect = 9.9e-23
Identity = 52/83 (62.65%), Postives = 64/83 (77.11%), Query Frame = 0


Query: 45  TVCQLALKGLPEEVYE-------VDAPTGYYDEAPGRMTVIYTTGMMARNR-EEGEITDL 104
           + C+LALKGLPE VYE       VDAPTG+++EAPGRM+ IYT GM+AR R +E E T +
Sbjct: 186 STCELALKGLPEVVYETEWDLIMVDAPTGFHEEAPGRMSAIYTAGMIARRRKDEEETTAV 245

Query: 105 FVHDANREVEDKFSMEFLCEGYM 120
           FVHD +R+VED+FSMEFLC  YM
Sbjct: 246 FVHDVDRKVEDEFSMEFLCRDYM 268

[Close]

BLAST of CmoCh13G009670 vs. TAIR 10
Match: AT1G67330.1 (Protein of unknown function (DUF579) )

HSP 1 Score: 87.8 bits (216), Expect = 9.5e-18
Identity = 43/87 (49.43%), Postives = 57/87 (65.52%), Query Frame = 0


Query: 39  FPTPLSTVCQLALKGLPEEVYE-------VDAPTGYYDEAPGRMTVIYTTGMMARNREEG 98
           FP   +  C LAL  LP+E Y+       VDAP GY+ EAPGRM  I+++ +MARNR+  
Sbjct: 177 FPIRYNEKCPLALTSLPDEFYDTEWDLIMVDAPKGYFPEAPGRMAAIFSSAIMARNRKGD 236

Query: 99  EITDLFVHDANREVEDKFSMEFLCEGY 119
             T +F+HD NR+VE+ F+ EFLCE Y
Sbjct: 237 GTTHVFLHDVNRKVENAFANEFLCEKY 263

The following BLAST results are available for this feature:

BLAST of CmoCh13G009670 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NMK1	1.2e-28	70.93	Glucuronoxylan 4-O-methyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=GXM1 P...	[more]
Q9T0F7	5.6e-23	60.47	Glucuronoxylan 4-O-methyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=GXM2 P...	[more]
Q9LQ32	5.6e-23	59.55	Glucuronoxylan 4-O-methyltransferase 3 OS=Arabidopsis thaliana OX=3702 GN=GXM3 P...	[more]
Q9C7F9	2.3e-16	51.90	Probable methyltransferase At1g27930 OS=Arabidopsis thaliana OX=3702 GN=At1g2793...	[more]
Q9SNE5	1.0e-08	40.66	Protein IRREGULAR XYLEM 15 OS=Arabidopsis thaliana OX=3702 GN=IRX15 PE=2 SV=1	[more]

BLAST of CmoCh13G009670 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JWG6	7.1e-29	78.82	glucuronoxylan 4-O-methyltransferase 1-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1GSM4	7.1e-29	78.82	glucuronoxylan 4-O-methyltransferase 1-like OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A5D3BL62	1.3e-27	76.47	Glucuronoxylan 4-O-methyltransferase 1 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A0A0LTA4	1.3e-27	76.47	Polysacc_synt_4 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G04...	[more]
A0A1S3ATM9	1.3e-27	76.47	glucuronoxylan 4-O-methyltransferase 1 OS=Cucumis melo OX=3656 GN=LOC103482841 P...	[more]

BLAST of CmoCh13G009670 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895348.1	3.9e-29	81.18	glucuronoxylan 4-O-methyltransferase 1 [Benincasa hispida]	[more]
KAG7012196.1	1.5e-28	78.82	Glucuronoxylan 4-O-methyltransferase 1, partial [Cucurbita argyrosperma subsp. a...	[more]
XP_022954973.1	1.5e-28	78.82	glucuronoxylan 4-O-methyltransferase 1-like [Cucurbita moschata]	[more]
XP_022994652.1	1.5e-28	78.82	glucuronoxylan 4-O-methyltransferase 1-like [Cucurbita maxima]	[more]
XP_023542198.1	1.5e-28	78.82	glucuronoxylan 4-O-methyltransferase 1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmoCh13G009670 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G09610.1	8.3e-30	70.93	Protein of unknown function (DUF579)	[more]
AT1G33800.1	4.0e-24	59.55	Protein of unknown function (DUF579)	[more]
AT4G09990.1	4.0e-24	60.47	Protein of unknown function (DUF579)	[more]
AT1G71690.1	9.9e-23	62.65	Protein of unknown function (DUF579)	[more]
AT1G67330.1	9.5e-18	49.43	Protein of unknown function (DUF579)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021148	Polysaccharide biosynthesis domain	PFAM	PF04669	Polysacc_synt_4	coord: 43..120 e-value: 6.7E-24 score: 84.5
IPR006514	IRX15/IRX15L/IGXM	PANTHER	PTHR31444	OS11G0490100 PROTEIN	coord: 39..120
None	No IPR available	PANTHER	PTHR31444:SF31	GLUCURONOXYLAN 4-O-METHYLTRANSFERASE 1	coord: 39..120

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh13G009670.1	CmoCh13G009670.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032259	methylation
biological_process	GO:0009834	plant-type secondary cell wall biogenesis
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0045492	xylan biosynthetic process
cellular_component	GO:0000139	Golgi membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0030775	glucuronoxylan 4-O-methyltransferase activity
molecular_function	GO:0004672	protein kinase activity