CmoCh13G007620 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh13G007620
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	polyadenylate-binding protein RBP45-like
Location	Cmo_Chr13: 7391373 .. 7399476 (+)
RNA-Seq Expression	CmoCh13G007620
Synteny	CmoCh13G007620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGGCCGGTTGATGGACATATGTATATATGTATGGGGCCCACGTCCTTTCGGATAACGTGTCTCAATTTTTTGTTAGTGTTTGCTAATGAAATAAAATCCTAGTAAATCCCTACCATTTCGTCTCTCTCTCTCTCTCGCTCGAGGCCTGGCTGCTTCCGACTTCTAGGGTTAGGGTTTCTCCGAGTCAAACGAGATCCCCAAACTCTCTCCGTATCTCACATTTAACAAATTCCGACATCTTTGATACGATGCAGCCTGCTCCTGGTGTTGCCCCTCACAACATGCCTCACCAGGCCCCTCAGTATCAGCAACAGCAACCTCCTTACATGATGATGCCCCCTCAGCCGCCTCAAACGCAGCCTGTCCCTCAGATGTGGCCTCAACAGCCGCAGGCCGCCTCGCCACAGGGCCAACCGCCTCAACCAGCTAGTGGCGATGAGGTCCGTACTCTCTGGATCGGAGACTTGCAATACTGGATGGACGAGAACGCTCTTTTCAATTGCTTTGCTCATACAGGCGAGGTACGTCTATGAATGCCACTCGAGTGGAGATCATGCGTGTATATGTACTTATTCTATCTTTTTTAGTGAATGAATTATGGTGATTAGTTGGATTATATGAAGACTTGTGCGCATACATGTTATTACAATGTAAACTCGGTGGATAAGAAGCGGTTGGTGTTTTTTTTTTTTTTTTTTGCTTTTTTTGAATTAATGATGTCTATATCCCCAGATTTCCTCCGTGAAAGTCATTCGGAACAAGCAAACTGGACAGTCCGAGGGTTACGGCTTTATTGAGTTCTTAACACGCCCAGCTGCAGAAAGAGTACTTCAAACGTATAATGGCACCCCGATGCCCATCGGGGCACAAAATTTCAGATTGAACTGGGCATCAGCAGGGGAGAAGCGACAAGATGACTCTCCTGAATATACAATTTTTGTAGGGGATTTGGCTGGTGATGTTACTGATTACGTGCTTCAAGAGACGTTCAGGGGTCGTTATACATCCGTAAAGGGTGCCAAGGTTGTGATCGACAGGCTCACTGGACGCACTAAAGGTTATGGGTTTGTGAAGTTCGGAGACGAGACTGAACAAATGAGGGCGATGACTGAGATGAATGGTGTTATCTGCTCATCTAGGCCTATGCGAATTGGACCTGCGGCTAACAAGAACACTTCTGGTACTCAGCAATATGCGAAAAGTAAATACCTCCTTTTCTCTAAAGGGGATTCATTTTAATGCAAAACAGTCCATCAAATTTTTTTTGGAGTATATTCCGCTTCATTAATTCGTTGCATGGATGTGATTGTGTTTAGAGTTCTGGTATTCATTTTGAATATGCCAGGATATAACCCGACCTTTTTGTTCTTTGTTTGGATTTTTCTCCTCTCCGTTACTCTTATTTTTAGTTTTCTAGCATTTTAATTCCACCCTCGTTATACCTTGGAAGAATAGTAGCCTTTCATGCCTTTTCCTTCGTGTACTTCCAATTCGAACTTTGGTCACTGTAACTACTGTAAAAAAAGATTCATTAACTTGTAAAACTCCTCTTTTCTTTAAGCAGGGTGTCAAAAGGCTCTGTTAGTTTGGAGTCCGCAACTGATTTCAGCTGACATGCTTACCCTTTAGTACGTTGTTCCAATTAGGTCAGTTTTTTTACCGCCAATGTCTTACCTCTTTCTTTTTAAGTGGCGTATTTTTGCTACGTTTTTCTAATTCACCTTTAGTTTTGCAAAGTTTAGTTTTTCCTTTCATTTGCATGGGTTTTTTTTTTCCCCTGCCATTTCGCAATGTCTAATTCCGTCAGAATTTTTTTATTTTTTTTTAGTTTAGGCCACTTAGGTTCTTTAGCTAGATTTATTGAAATTTCCAACAACTGGAGTCTGGGATAGCAGACTAGTTTGATTCTGAGCTTTCTTTCTACAGAAATTGCAGTAGGCCACAAAGGTGTGGTTGTCCTTCACCTCCTTTAGGGCTTATGGGATTTACTTTCCTATATTTTAATCTCAGTATTTGATGGTTGGATCCTTTTCTGTAGACGAATCCTCTACCTTCAAAAGAATTTGATACATTTCTTGATCTGCATGGATTCTCATTTCATACTAGTTTTTCGTTCTGTAGCTCGATATTTCATAAAGCCATTCCCCTTGAACATTGGATTCTTCTTTTAACGTGTTGGATTGTTGTACTTGATAGTTGGATACCATTTCTTTAGACAAATCCACTACCTTCAAAAGAATTTGATACATTTCTTGATCTGCATGGGTTTCATTTCTTGTTAGTTTTTCGTTCTGTAGCTTGATATTTCATAAAGCCATTCCTCTTGAACATAGTATTCTTCTTTTAACGTGTTGGATTTATTTTTATTCAGGTTTATGTCGTATATACATCTTTTCTAAATAAGATTTATTTATATTGGTTTTGCTGATTTAAAGATTGGCTACATTCACCTCTTCTAGTTTTGTCTCAAGGTTCACACCGTTTCTTGGTTTGAATCATTTTATGTGATTGATTGGCCAAATTTAGTGTGCAAGATTTCCAATATGGCGTAGTATGGTTACCTCGTGTCTTAAGTCAGGGAGGCTATTTGTGATATTTAGTTCTTTAGGATGGGATGCCTTATAGTTTCCCTTTCTTTATGAATAACTATTGTGTATTATTATATGGTTTTTTTTTCTTGTCCGATATGGGTAAGATATGGAATTACTTATTCAACTATTTTGCGTTCAGCACAAAGTTTTGTATTCTTAATATTCTGGTCTTCATGTGAATTTTCACAATTGGTATGAGCTGAAAGCATTGTAGTTCTTCAAAGCTTACGCCTAGGAGGCTTACACCCTTATGGATAGGGGTATGCGCCTTCTGTGCTTCTGTATCTGAGGTGCAAAACACTAAGTCTCAGTGAAAGACAGGAGTAAGACAAGAATTAATTACGGTAAATTTTAAGAGTTGAGATTTTGGCATTCGTGGGTTCTGTTTGGTGGGCTAAGTCCCAGTGAAAGACAGGATGGGTTTTTTCATATATCTTTGGTTTGCTAATCATTTGTGCTTACTTTGTTTTAGTCTTTGCATGTGTCTTGGTTTTTAAAATTTTTTTTTTAATTATTTTATTTTATTTTATAATTACTATCATTCACCCTAATGATGTTGTGATATGACACAGTTAAGTTAGAAGTGTCATTGAGGACAGTATCTTATTTAAGAAAAATGACAACTCTGGAATTTTGTAGTTTCGTTGACAGATTAGTTTGATATTTCCAAATGCAGCTTCATACCAGAATCCTCAAGGGACTCAGAATGAGAACGATCCAAATAATACAACTGTGGGTACTTCATTACTTTTTAGTAGTAATATAATCATATGGACATGTTTATGAGTTGTTATGTTATCTTCTTGCAGATATTTGTGGGAAATTTGGATTCTAACGTCACTGATGAGCATCTTAGACAAGTATTCAGTCAGTATGGAGAGCTGGTGCATGTTAAGATACCTGCAGGCAAGCGATGTGGCTTTGTTCAATTTTCAGACAGGTTGGTTCTCAAAAGCATTTATGATGCCTCGCCCCTTCCCAACACTTGGCGCTCATTTGCTCATGAGTATATTTTGTTTTTTTTATATCCTATTTCAGAAGCTGCGCCGATGAAGCTTTGCGCGTGTTAAATGGAACCCAAATTGGTGGGCAAACCATTAGACTTTCATGGGGCCGTAGTCCTTCTAACAAACAGGTAGTGGTAGTAGTATTATGTCTCACTTATTATCCAGTTTTCATATTGAAGCAAATATGAAAGCTTTGTAATCCTCTATTGCAAATTTACAGCCTCAGGCTGACCCTAATCAGTGGAATGGAGGAGGAGGAGGAGGAGGAGGAGGAGGATATTATGGGTATGGACAAGGATATGAAAACTATAGCTATGCTCCAGCTGCCCAAGACCCTAACATGTTCTACAGTGGGTATGGTGGGTATGGGAACTACCAACAACCAGGACCGCAGCAGCCATCGCAGCAACAAGGAGGAGGGTATATGTAGATGACAAGTTTGCTTGTTGTGCCCCCCCACCACCTCCTCCCCTCAGAACGTGACCCCAAACTTCTGCTTGTCATTTGTAGAAGATTTTGAAGATGTTACTCTCATCTAGTCTGTATGACTCCGTTGACATGATGTCACTTGTGTGCTCGTATTTGGTGTTAGAAGGTTTTGCGTCTTGCGTTATTTGTTTCTTCATAATCTATCATGGGTAGCCAGCCATTTGAATGATCCTATTGTAATTCTCGTAAATTCTTGCTTAAATTGCTGTACGTGGTTGCAGTTCAACCTGAACCTACTATTTATGTTCCTGCTGGACTAGCCTATCTGACTTATATTCTGGCTTTGTTGACACTTTTTTATGGTATTTAAGTGGCTTGAACAATACTTTTTGTTGTTGGGTTCCCATTTCAATTTGAGTTCTTAAATCATCGAGTTTTTGTAGGGAAAATTCATTTATTAGTAATAAATATGGGGCCAAATTGCAATTTTTATTCACTTCTGCACGTTCGATTGAAATTAATTTTTATAAAAATATTTTAAAATTGTTTAAATTCTCAACAAATTTCTATGCAAGGAGTGCTTTTTTCGGGCATTGTTAGAAAAAGTCTGCCGACGATAATAGAAAATCTAAATATTCACGTGCGGTCGGTACCATCTGGACTTCCATAAGCTCGCTTCTTGATTGCTTGGATTTTGGAGCGTCAAAATGACGTTGGACATGGTGATGTGGGGCCCAATGTTGTATTAATCATGGCCTCAAAGCGTTCGGATAAAGTATTTTATTTTATTTCCTTTTTAAACGATAAATCTAATTGTTTCCTTCCGGATCCCCTTCCTATTTGTTCCCTCCCTTTCGCTCATTCTCGACTTCTAGGGTTAGGGTTTCTCTTTGTTCAGACGAGACACCCAAACTCTCTTCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCTCCACAAGGAGATTTTGTTTCCCTTCTTTGAAACCATGCAGCCTGCACCTGGTATTGCTCCTCACAACATGCCTCACCAGGCCCCTCAATACCAGCAACAACAACCTCCTTACATGATGATGCCTCCCCAGCCGCCTCAACCGCAGCCTGTCCCTCAGATGTGGCCTCAGCAGCCGCAGGCCGCTTCGCCTCAGGGACAACCCTCTCAACCAGCCAACGCGGATGAAGTTCGTACGCTCTGGATCGGAGACTTGCAGTACTGGATGGACGAGAACTATATTTTTAATTGCTTTGCTCATACAGGCGAGGTACGTGAATCAACGCGCCACCGCACTTGAGATCATGTGTGTATATGTCTTTATTTTTATTATTATTATTGGTGGGATTTGTCGGACTTGATTATTAGGTCGATTTCATCCAGATTCGTGCATGTACATGTTTCTGAAATGTCATCTTGATAGATATTAAGCGGTTACAATTTGTTTTCGTATAGAATTGATGATGTTTTTATTCCCAGGTTTCATCCGTGAAAGTTATTCGGAACAAGCAAACCGGCCAGTCCGAGGGTTACGGCTTTCTTGAATTTTTAACTCGTCCAGCAGCGGAAAGGGTACTACAAGCATATAACGGCACAGCGATGCCCAATGGGGCACAAAATTTTAGATTGAACTGGGCATCAGCAGGGGAGAAACGACAAGATGACTCTCCCGATTACACAATTTTTGTAGGAGATTTGGCTGGTGATGTTACTGATTACGTGCTACAAGAGACATTTAGGGCCCGTTATACCTCCGTTAAGGGTGCTAAAGTCGTGATTGACAGGCTCACTGGACGTACTAAAGGTTATGGATTTGTTAAGTTCGGAGATGAGAGTGAACAAATGCGGGCAATGACTGAGATGAATGGTGTCGTCTGTTCATCCAGGCCCATGCGTATCGGACCAGCGGCTAACAAGAACACTTCTGGCAGTCAGCAGTATGCGAAAAGTAAATACTAACCTCCCCCCAAATTGGAAAATTTAAATGAGAAACAGAGCATCAAATTCTGTATTGAATATATCCTCCTTCATTCGTTCATAGTATGGATGTGCCGGTTGAGTTTAGAGTTTCGGCATTCTTTTTGCTTTCAATATGCCTAGATGAAATCCGACCTTCTTTATTTTTCTGTCCGGATTTAGCTCCTTTTCGTTACTTTTATTTTTTAGTTTTCTATCATTTTAATTCCCCCCTCGTTGTACCCTTGGAGAATAGTAGCCTTTCATGCCTTTTCCTTCGTGCAGTTCCAATTCGAACTTTGGTCATTATAACTATAAAAAGGATTCATAAACTTATAAAACTCCTCTTTTCTTTAAGCAGGGTGTCAAAAGGTTCTGTCAGCTTGGGGTCCGCTACTGATTTCAGCTGACATGGTTACCCTTTAGTACGTTGTTCCATTTAGGTCAGTTTTTTCCCGCCAATGTCTTATGTGGCATATTTATGCTACGTTTTTTAATTCACCTTTAGTTCTGCAACGTTTAGCTTTTCCTTTCATTTTCATGGGTGTTTTTTTTCTCCCTGGCATTTCAATCTAATTCCATTAGATTTTTTTCAAAAGAAGTTCAGGCTACGTTGGCTCTTTAGGTAGATGAATTATTGCAATTTCATTAATGTGATGGCACGCTGGTTCTATACTGAACAATCCTTCTACAACAGCTATAGCAGACCACATAGGTTGTGCTTGTCCTTTACCACCTAATATTAGGGTTTACAGGGTTTACAGGTTTACCTATGTTTTCTTTTAAGTATTATTATTCGTTCCTGTTTATGCTTTCGAATCCATTACCTATAAAAGAATTTTGGACTGCATGGATTCTCCTTTCTTTCTAGTTTTTCATTTCTCTAGCTCGGTATTCCAAATTGTCATTCCTTTCTTCTTTAACCTGGTGGACACAGATATATTCAGGGATACTTTGTTTGTATCTCGTGTAAATAGGATTCTATTGATTGGTCTTGCTTATGTTATGTTTGGCTACTTTCATCACTTATAGTTTTTGTTATATATTTTACTCTGTTTCTTTGTTTGAATAATTTTTATGCTAATGATTGGGCCAGATCCTTCATGTGATATGATATGATCCCTTGTATCATATGATATGATATATTCTGTTTCTTTGTTTGAGTATGGTTGCCTGAGTCTGAAGTTAGAGACTCTATTTGTGATATTTAGAACATTAGGATGTGATGCTTTATAATATCACCTTCTTTTTTTAATCATGTGTATTATTCTATGGATATTTCTTCATGTGATATGATATGATCCCTTATATTTACCTATTTTACATTCTATGTTTTGTTTTATAAATTCTGGCCTTTTTATGATCAATGTTTTCAAACCCTTCCCTGTCTCTCTTATCAAAAAGAAAAAAAAAAAAAAAACCCTTCCCTGTCTCTAGGCTTGCGCCTATGTCAGATAAAAGGAAGATTGTACCTTTATGGACGATATCATGCATGTCTTGATTTGAGCCTTTTTAGGCGTGACTGTGATATAATAGACTTGTCTTTTATTATTTCCCTTACTTACGGGTAATTCTTTGTATCTCTAAATCTTTTGGTATCCTTTGTGGTTTTATGAGTACTATAATATTACCCTTCATACTGCCACATGCTTTATGTCTTACCTCTCTTAACCAAAAGTGTTTAGGTCTCAGTAAACCTTTTAAAATACTTTGAGATTAAGCAATTGAAAATTGCTTTTGTTTCAATTTTATTGTTGGAGATTTTGTCTTTAAGATATATTAAAAAGAAGAGAACACCTGATAGGTTCAAGATAAAATGCAAATTCATGTTAGCTTAATTTGTTGTATTGCAGATTCATACCAGAATCCTCAAGGGACCCAAAATGAGAGTGATCCAAACAATACTACTGTGGGTTCTGTACCCTTTTTCTTTTTCCATGTAACTTTATTTGCGGTTTTTAACTTCTTTAATGGCTATATTGCAGATATTTGTGGGGAATTTGGACTCTAATGTCACAGATGATCACTTGAGACAAGTATTTGGTCAGTATGGTGAATTGGTGCATGTAAAGATACCTGTGGGCAAACGATGTGGTTTCGTTCAATTTTCTGACCGGTGA

mRNA sequence

ATGATGGCCGGTTGATGGACATATGTATATATGTATGGGGCCCACGTCCTTTCGGATAACGTGTCTCAATTTTTTGTTAGTGTTTGCTAATGAAATAAAATCCTAGTAAATCCCTACCATTTCGTCTCTCTCTCTCTCTCGCTCGAGGCCTGGCTGCTTCCGACTTCTAGGGTTAGGGTTTCTCCGAGTCAAACGAGATCCCCAAACTCTCTCCGTATCTCACATTTAACAAATTCCGACATCTTTGATACGATGCAGCCTGCTCCTGGTGTTGCCCCTCACAACATGCCTCACCAGGCCCCTCAGTATCAGCAACAGCAACCTCCTTACATGATGATGCCCCCTCAGCCGCCTCAAACGCAGCCTGTCCCTCAGATGTGGCCTCAACAGCCGCAGGCCGCCTCGCCACAGGGCCAACCGCCTCAACCAGCTAGTGGCGATGAGGTCCGTACTCTCTGGATCGGAGACTTGCAATACTGGATGGACGAGAACGCTCTTTTCAATTGCTTTGCTCATACAGGCGAGATTTCCTCCGTGAAAGTCATTCGGAACAAGCAAACTGGACAGTCCGAGGGTTACGGCTTTATTGAGTTCTTAACACGCCCAGCTGCAGAAAGAGTACTTCAAACGTATAATGGCACCCCGATGCCCATCGGGGCACAAAATTTCAGATTGAACTGGGCATCAGCAGGGGAGAAGCGACAAGATGACTCTCCTGAATATACAATTTTTGTAGGGGATTTGGCTGGTGATGTTACTGATTACGTGCTTCAAGAGACGTTCAGGGGTCGTTATACATCCGTAAAGGGTGCCAAGGTTGTGATCGACAGGCTCACTGGACGCACTAAAGGTTATGGGTTTGTGAAGTTCGGAGACGAGACTGAACAAATGAGGGCGATGACTGAGATGAATGGTGTTATCTGCTCATCTAGGCCTATGCGAATTGGACCTGCGGCTAACAAGAACACTTCTGGTACTCAGCAATATGCGAAAACTTCATACCAGAATCCTCAAGGGACTCAGAATGAGAACGATCCAAATAATACAACTATATTTGTGGGAAATTTGGATTCTAACGTCACTGATGAGCATCTTAGACAAGTATTCAGTCAGTATGGAGAGCTGGTGCATGTTAAGATACCTGCAGGCAAGCGATGTGGCTTTGTTCAATTTTCAGACAGAAGCTGCGCCGATGAAGCTTTGCGCGTGTTAAATGGAACCCAAATTGGTGGGCAAACCATTAGACTTTCATGGGGCCGTAGTCCTTCTAACAAACAGCCTCAGGCTGACCCTAATCAGTGGAATGGAGGAGGAGGAGGAGGAGGAGGAGGAGGATATTATGGGTATGGACAAGGATATGAAAACTATAGCTATGCTCCAGCTGCCCAAGACCCTAACATGTTCTACAGTGGGTATGGTGGGTATGGGAACTACCAACAACCAGGACCGCAGCAGCCATCGCAGCAACAAGGAGGAGGGTATATATGTTACTCTCATCTAGTCTCCAGCCATTTGAATGATCCTATTGTAATTCTCAAAAAGTCTGCCGACGATAATAGAAAATCTAAATATTCACGTGCGGTCGGGTTAGGGTTTCTCTTTGTTCAGACGAGACACCCAAACTCTCTTCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCTCCACAAGGAGATTTTGTTTCCCTTCTTTGAAACCATGCAGCCTGCACCTGGTATTGCTCCTCACAACATGCCTCACCAGGCCCCTCAATACCAGCAACAACAACCTCCTTACATGATGATGCCTCCCCAGCCGCCTCAACCGCAGCCTGTCCCTCAGATGTGGCCTCAGCAGCCGCAGGCCGCTTCGCCTCAGGGACAACCCTCTCAACCAGCCAACGCGGATGAAGTTCGTACGCTCTGGATCGGAGACTTGCAGTACTGGATGGACGAGAACTATATTTTTAATTGCTTTGCTCATACAGGCGAGGTTTCATCCGTGAAAGTTATTCGGAACAAGCAAACCGGCCAGTCCGAGGGTTACGGCTTTCTTGAATTTTTAACTCGTCCAGCAGCGGAAAGGGTACTACAAGCATATAACGGCACAGCGATGCCCAATGGGGCACAAAATTTTAGATTGAACTGGGCATCAGCAGGGGAGAAACGACAAGATGACTCTCCCGATTACACAATTTTTGTAGGAGATTTGGCTGGTGATGTTACTGATTACGTGCTACAAGAGACATTTAGGGCCCGTTATACCTCCGTTAAGGGTGCTAAAGTCGTGATTGACAGGCTCACTGGACGTACTAAAGGTTATGGATTTGTTAAGTTCGGAGATGAGAGTGAACAAATGCGGGCAATGACTGAGATGAATGGTGTCGTCTGTTCATCCAGGCCCATGCGTATCGGACCAGCGGCTAACAAGAACACTTCTGGCAGTCAGCAGTATGCGAAAAATTCATACCAGAATCCTCAAGGGACCCAAAATGAGAGTGATCCAAACAATACTACTATATTTGTGGGGAATTTGGACTCTAATGTCACAGATGATCACTTGAGACAAGTATTTGGTCAGTATGGTGAATTGGTGCATGTAAAGATACCTGTGGGCAAACGATGTGGTTTCGTTCAATTTTCTGACCGGTGA

Coding sequence (CDS)

ATGCAGCCTGCTCCTGGTGTTGCCCCTCACAACATGCCTCACCAGGCCCCTCAGTATCAGCAACAGCAACCTCCTTACATGATGATGCCCCCTCAGCCGCCTCAAACGCAGCCTGTCCCTCAGATGTGGCCTCAACAGCCGCAGGCCGCCTCGCCACAGGGCCAACCGCCTCAACCAGCTAGTGGCGATGAGGTCCGTACTCTCTGGATCGGAGACTTGCAATACTGGATGGACGAGAACGCTCTTTTCAATTGCTTTGCTCATACAGGCGAGATTTCCTCCGTGAAAGTCATTCGGAACAAGCAAACTGGACAGTCCGAGGGTTACGGCTTTATTGAGTTCTTAACACGCCCAGCTGCAGAAAGAGTACTTCAAACGTATAATGGCACCCCGATGCCCATCGGGGCACAAAATTTCAGATTGAACTGGGCATCAGCAGGGGAGAAGCGACAAGATGACTCTCCTGAATATACAATTTTTGTAGGGGATTTGGCTGGTGATGTTACTGATTACGTGCTTCAAGAGACGTTCAGGGGTCGTTATACATCCGTAAAGGGTGCCAAGGTTGTGATCGACAGGCTCACTGGACGCACTAAAGGTTATGGGTTTGTGAAGTTCGGAGACGAGACTGAACAAATGAGGGCGATGACTGAGATGAATGGTGTTATCTGCTCATCTAGGCCTATGCGAATTGGACCTGCGGCTAACAAGAACACTTCTGGTACTCAGCAATATGCGAAAACTTCATACCAGAATCCTCAAGGGACTCAGAATGAGAACGATCCAAATAATACAACTATATTTGTGGGAAATTTGGATTCTAACGTCACTGATGAGCATCTTAGACAAGTATTCAGTCAGTATGGAGAGCTGGTGCATGTTAAGATACCTGCAGGCAAGCGATGTGGCTTTGTTCAATTTTCAGACAGAAGCTGCGCCGATGAAGCTTTGCGCGTGTTAAATGGAACCCAAATTGGTGGGCAAACCATTAGACTTTCATGGGGCCGTAGTCCTTCTAACAAACAGCCTCAGGCTGACCCTAATCAGTGGAATGGAGGAGGAGGAGGAGGAGGAGGAGGAGGATATTATGGGTATGGACAAGGATATGAAAACTATAGCTATGCTCCAGCTGCCCAAGACCCTAACATGTTCTACAGTGGGTATGGTGGGTATGGGAACTACCAACAACCAGGACCGCAGCAGCCATCGCAGCAACAAGGAGGAGGGTATATATGTTACTCTCATCTAGTCTCCAGCCATTTGAATGATCCTATTGTAATTCTCAAAAAGTCTGCCGACGATAATAGAAAATCTAAATATTCACGTGCGGTCGGGTTAGGGTTTCTCTTTGTTCAGACGAGACACCCAAACTCTCTTCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCTCCACAAGGAGATTTTGTTTCCCTTCTTTGAAACCATGCAGCCTGCACCTGGTATTGCTCCTCACAACATGCCTCACCAGGCCCCTCAATACCAGCAACAACAACCTCCTTACATGATGATGCCTCCCCAGCCGCCTCAACCGCAGCCTGTCCCTCAGATGTGGCCTCAGCAGCCGCAGGCCGCTTCGCCTCAGGGACAACCCTCTCAACCAGCCAACGCGGATGAAGTTCGTACGCTCTGGATCGGAGACTTGCAGTACTGGATGGACGAGAACTATATTTTTAATTGCTTTGCTCATACAGGCGAGGTTTCATCCGTGAAAGTTATTCGGAACAAGCAAACCGGCCAGTCCGAGGGTTACGGCTTTCTTGAATTTTTAACTCGTCCAGCAGCGGAAAGGGTACTACAAGCATATAACGGCACAGCGATGCCCAATGGGGCACAAAATTTTAGATTGAACTGGGCATCAGCAGGGGAGAAACGACAAGATGACTCTCCCGATTACACAATTTTTGTAGGAGATTTGGCTGGTGATGTTACTGATTACGTGCTACAAGAGACATTTAGGGCCCGTTATACCTCCGTTAAGGGTGCTAAAGTCGTGATTGACAGGCTCACTGGACGTACTAAAGGTTATGGATTTGTTAAGTTCGGAGATGAGAGTGAACAAATGCGGGCAATGACTGAGATGAATGGTGTCGTCTGTTCATCCAGGCCCATGCGTATCGGACCAGCGGCTAACAAGAACACTTCTGGCAGTCAGCAGTATGCGAAAAATTCATACCAGAATCCTCAAGGGACCCAAAATGAGAGTGATCCAAACAATACTACTATATTTGTGGGGAATTTGGACTCTAATGTCACAGATGATCACTTGAGACAAGTATTTGGTCAGTATGGTGAATTGGTGCATGTAAAGATACCTGTGGGCAAACGATGTGGTTTCGTTCAATTTTCTGACCGGTGA

Protein sequence

MQPAPGVAPHNMPHQAPQYQQQQPPYMMMPPQPPQTQPVPQMWPQQPQAASPQGQPPQPASGDEVRTLWIGDLQYWMDENALFNCFAHTGEISSVKVIRNKQTGQSEGYGFIEFLTRPAAERVLQTYNGTPMPIGAQNFRLNWASAGEKRQDDSPEYTIFVGDLAGDVTDYVLQETFRGRYTSVKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVICSSRPMRIGPAANKNTSGTQQYAKTSYQNPQGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGKRCGFVQFSDRSCADEALRVLNGTQIGGQTIRLSWGRSPSNKQPQADPNQWNGGGGGGGGGGYYGYGQGYENYSYAPAAQDPNMFYSGYGGYGNYQQPGPQQPSQQQGGGYICYSHLVSSHLNDPIVILKKSADDNRKSKYSRAVGLGFLFVQTRHPNSLLSSSSSSSSSSSSLHKEILFPFFETMQPAPGIAPHNMPHQAPQYQQQQPPYMMMPPQPPQPQPVPQMWPQQPQAASPQGQPSQPANADEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFLEFLTRPAAERVLQAYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYTSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVVCSSRPMRIGPAANKNTSGSQQYAKNSYQNPQGTQNESDPNNTTIFVGNLDSNVTDDHLRQVFGQYGELVHVKIPVGKRCGFVQFSDR

Homology

[Close]

BLAST of CmoCh13G007620 vs. ExPASy Swiss-Prot
Match: Q9LEB4 (Polyadenylate-binding protein RBP45 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP45 PE=1 SV=1)

HSP 1 Score: 497.3 bits (1279), Expect = 3.3e-139
Identity = 274/419 (65.39%), Postives = 307/419 (73.27%), Query Frame = 0


Query: 1   MQPAPGVAPHNMPHQAP------QYQQQQPP------YMMMPPQPPQTQPVPQ---MWPQ 60
           M P  GVA    P  AP      QYQQQ PP      +MM P QP Q Q  PQ    W Q
Sbjct: 1   MMPQSGVA---QPPMAPMSMDQHQYQQQAPPPTQQQQWMMPPQQPQQPQFQPQSQPAWAQ 60

Query: 61  QPQ------AASPQGQPPQPASGDEVRTLWIGDLQYWMDENALFNCFAHTGEISSVKVIR 120
           QP        A+    P    + +EVR+LWIGDLQYWMDEN L  CF HTGE+ S KVIR
Sbjct: 61  QPSQQQYGAMATTNPNPSPTGNPNEVRSLWIGDLQYWMDENYLSTCFYHTGELVSAKVIR 120

Query: 121 NKQTGQSEGYGFIEFLTRPAAERVLQTYNGTPMPIGAQNFRLNWASAGE-KRQDDSPEYT 180
           NKQTGQSEGYGF+EF +  AAE +LQTYNGT MP   QNFR+NWAS G  +R+DDS E+T
Sbjct: 121 NKQTGQSEGYGFLEFRSHAAAETILQTYNGTLMPNVEQNFRMNWASLGAGERRDDSAEHT 180

Query: 181 IFVGDLAGDVTDYVLQETFRGRYTSVKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTE 240
           IFVGDLA DVTDY+LQETF+  Y+SV+GAKVV DR+TGR+KGYGFVKF DE+EQ+RAMTE
Sbjct: 181 IFVGDLAADVTDYILQETFKSVYSSVRGAKVVTDRITGRSKGYGFVKFADESEQLRAMTE 240

Query: 241 MNGVICSSRPMRIGPAANKNTSGTQQYAKTSYQNPQGTQNENDPNNTTIFVGNLDSNVTD 300
           MNGV+CS+RPMRIGPAANK   GT Q  K +YQNPQ TQ E+DPNNTTIFVG LD  V +
Sbjct: 241 MNGVLCSTRPMRIGPAANKKPVGTPQ--KATYQNPQATQGESDPNNTTIFVGGLDPTVAE 300

Query: 301 EHLRQVFSQYGELVHVKIPAGKRCGFVQFSDRSCADEALRVLNGTQIGGQTIRLSWGRSP 360
           EHLRQVFS YGELVHVKI AGKRCGFVQF  R+ A++AL  LNGTQ+GGQ+IRLSWGRSP
Sbjct: 301 EHLRQVFSPYGELVHVKIVAGKRCGFVQFGTRASAEQALSSLNGTQLGGQSIRLSWGRSP 360

Query: 361 SNKQPQADPNQWNGGGGGGGGGGYYGYGQGYENYSYAPAAQDPNMFYSGYGGYGNYQQP 398
           S+K  Q D  QW     GG GG YYGYGQGYE Y YAP AQDPNM+Y  Y GY NYQQP
Sbjct: 361 SSK--QTDQTQW-----GGSGGAYYGYGQGYEAYGYAPPAQDPNMYYGNYPGYANYQQP 407

[Close]

BLAST of CmoCh13G007620 vs. ExPASy Swiss-Prot
Match: Q0J9Y2 (RNA-binding protein L OS=Oryza sativa subsp. japonica OX=39947 GN=RBP-L PE=1 SV=1)

HSP 1 Score: 469.5 bits (1207), Expect = 7.3e-131
Identity = 259/403 (64.27%), Postives = 298/403 (73.95%), Query Frame = 0


Query: 7   VAPHNMPHQAPQYQQQQPPYMMMPPQPPQTQPVPQMWPQQPQAASPQGQP-PQPASGDEV 66
           + P   PHQ      QQPP M    QPP      Q+ P QP  A+P  Q  P PA+ DEV
Sbjct: 32  IPPPMPPHQYGAPPPQQPPAMW--GQPPPQAHYGQVPPPQPYYAAPPPQAMPAPAAADEV 91

Query: 67  RTLWIGDLQYWMDENALFNCFAHTGEISSVKVIRNKQTGQSEGYGFIEFLTRPAAERVLQ 126
           +TLWIGDLQ WMDE+ ++NCFA TGE+ SVK+IR+KQ+GQ +GYGF+EF +R AA+R+LQ
Sbjct: 92  KTLWIGDLQPWMDESYIYNCFAATGEVQSVKLIRDKQSGQLQGYGFVEFTSRAAADRILQ 151

Query: 127 TYNGTPMPIGAQNFRLNWASAGEKRQDDSPEYTIFVGDLAGDVTDYVLQETFRGRYTSVK 186
           TYNG  MP     FRLNWASAGEKR DD+P+YTIFVGDLA DVTDY+LQETFR  Y SVK
Sbjct: 152 TYNGQMMPNVEMVFRLNWASAGEKR-DDTPDYTIFVGDLAADVTDYLLQETFRVHYPSVK 211

Query: 187 GAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVICSSRPMRIGPAANKNTSGTQQY 246
           GAKVV D++T R+KGYGFVKFGD TEQ RAMTEMNG++CSSRPMRIGPAANK T+G Q+ 
Sbjct: 212 GAKVVTDKMTMRSKGYGFVKFGDPTEQARAMTEMNGMLCSSRPMRIGPAANKKTTGVQE- 271

Query: 247 AKTSYQNPQGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGKRCGFV 306
                 N QG Q+ENDPNNTTIFVG LD NVT++ L+QVF+ YGE+VHVKIP GKRCGFV
Sbjct: 272 ---RVPNAQGAQSENDPNNTTIFVGGLDPNVTEDVLKQVFAPYGEVVHVKIPVGKRCGFV 331

Query: 307 QFSDRSCADEALRVLNGTQIGGQTIRLSWGRSPSNKQPQADPNQWNGGGGGGGGGGYYGY 366
           Q+ +R  A++AL VL GT IGGQ +RLSWGRS SNKQPQ D NQW  G G G GG Y GY
Sbjct: 332 QYVNRPSAEQALAVLQGTLIGGQNVRLSWGRSLSNKQPQHDSNQW--GAGAGAGGYYGGY 391

Query: 367 GQGYENYSYAPAAQDPNMF-YSGYGGYGNYQQP--GPQQPSQQ 406
           GQGYE Y      QDPNM+ Y  Y GY NYQQ     QQP QQ
Sbjct: 392 GQGYEAYGGYAQPQDPNMYGYGAYAGYPNYQQQQVAQQQPPQQ 425

[Close]

BLAST of CmoCh13G007620 vs. ExPASy Swiss-Prot
Match: Q9SAB3 (Polyadenylate-binding protein RBP45B OS=Arabidopsis thaliana OX=3702 GN=RBP45B PE=1 SV=1)

HSP 1 Score: 468.4 bits (1204), Expect = 1.6e-130
Identity = 268/424 (63.21%), Postives = 309/424 (72.88%), Query Frame = 0


Query: 2   QPAP-GVAPHNMPHQAPQYQQ-QQPPYMMMPPQPPQTQPVPQMWPQQPQAASPQGQPPQP 61
           QP P G+ PH+ P  + Q Q   Q PY +    PP     PQMW   PQAA+P     QP
Sbjct: 4   QPPPGGILPHHAPPPSAQQQYGYQQPYGIAGAAPPP----PQMW--NPQAAAPPS--VQP 63

Query: 62  ASGDEVRTLWIGDLQYWMDENALFNCFAHTGEISSVKVIRNKQTGQSEGYGFIEFLTRPA 121
            + DE+RTLWIGDLQYWMDEN L+ CFAHTGE+ S KVIRNKQTGQ EGYGFIEF +  A
Sbjct: 64  TTADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYGFIEFASHAA 123

Query: 122 AERVLQTYNGTPMP-IGAQNFRLNWA--SAGEKRQDDSPEYTIFVGDLAGDVTDYVLQET 181
           AERVLQT+N  P+P    Q FRLNWA  S+G+KR DDSP+YTIFVGDLA DVTDY+L ET
Sbjct: 124 AERVLQTFNNAPIPSFPDQLFRLNWASLSSGDKR-DDSPDYTIFVGDLAADVTDYILLET 183

Query: 182 FRGRYTSVKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVICSSRPMRIGPAAN 241
           FR  Y SVKGAKVVIDR+TGRTKGYGFV+F DE+EQ+RAMTEMNGV CS+RPMRIGPAA+
Sbjct: 184 FRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTRPMRIGPAAS 243

Query: 242 KNTSGTQQYAKTSYQ-NPQGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVK 301
           K     Q   + SYQ +  G   +NDPNNTT+FVG LD++VTD+HL+ VFSQYGE+VHVK
Sbjct: 244 KKGVTGQ---RDSYQSSAAGVTTDNDPNNTTVFVGGLDASVTDDHLKNVFSQYGEIVHVK 303

Query: 302 IPAGKRCGFVQFSDRSCADEALRVLNGTQIGGQTIRLSWGRSPSNKQPQADPNQWNGGGG 361
           IPAGKRCGFVQFS++SCA+EALR+LNG Q+GG T+RLSWGRSPSNKQ   DP+Q+     
Sbjct: 304 IPAGKRCGFVQFSEKSCAEEALRMLNGVQLGGTTVRLSWGRSPSNKQ-SGDPSQFY---- 363

Query: 362 GGGGGGYYGYGQGYENYSYAPAAQDPNMFYSGY--GGY-GNYQ------QPGPQQPSQQQ 411
                 Y GYGQG E Y Y    QDPN +Y GY  GGY G YQ      Q  PQQP QQQ
Sbjct: 364 ------YGGYGQGQEQYGYT-MPQDPNAYYGGYSGGGYSGGYQQTPQAGQQPPQQPPQQQ 403

[Close]

BLAST of CmoCh13G007620 vs. ExPASy Swiss-Prot
Match: Q93W34 (Polyadenylate-binding protein RBP45C OS=Arabidopsis thaliana OX=3702 GN=RBP45C PE=2 SV=1)

HSP 1 Score: 461.5 bits (1186), Expect = 2.0e-128
Identity = 258/422 (61.14%), Postives = 295/422 (69.91%), Query Frame = 0


Query: 2   QPAP-----GVAPHNMPHQAPQYQQQQPPYMMMPPQPPQTQPVPQMWPQQ--PQAASPQ- 61
           QP P        P  +P     Y QQQ  +MM   Q  Q QP P  W QQ  P +  PQ 
Sbjct: 4   QPPPASNGAATGPGQIPSDQQAYLQQQQSWMMQHQQQQQGQP-PAGWNQQSAPSSGQPQQ 63

Query: 62  -----GQPPQPASGDEVRTLWIGDLQYWMDENALFNCFAHTGEISSVKVIRNKQTGQSEG 121
                G    P S  E+R+LWIGDLQ WMDEN L N F  TGE ++ KVIRNKQ G SEG
Sbjct: 64  QQYGGGGSQNPGSAGEIRSLWIGDLQPWMDENYLMNVFGLTGEATAAKVIRNKQNGYSEG 123

Query: 122 YGFIEFLTRPAAERVLQTYNGTPMPIGAQNFRLNWA--SAGEKRQDDSPEYTIFVGDLAG 181
           YGFIEF+    AER LQTYNG PMP   Q FRLNWA   AGE+RQ + PE+T+FVGDLA 
Sbjct: 124 YGFIEFVNHATAERNLQTYNGAPMPSSEQAFRLNWAQLGAGERRQAEGPEHTVFVGDLAP 183

Query: 182 DVTDYVLQETFRGRYTSVKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVICSS 241
           DVTD++L ETF+  Y+SVKGAKVV DR TGR+KGYGFV+F DE+EQ+RAMTEMNG  CSS
Sbjct: 184 DVTDHMLTETFKAVYSSVKGAKVVNDRTTGRSKGYGFVRFADESEQIRAMTEMNGQYCSS 243

Query: 242 RPMRIGPAANKNTSGTQQYAKTSYQNPQGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFS 301
           RPMR GPAANK     Q     SYQN QG   E+DP NTTIFVG +D +VT++ L+ VF 
Sbjct: 244 RPMRTGPAANKKPLTMQ---PASYQNTQGNSGESDPTNTTIFVGAVDQSVTEDDLKSVFG 303

Query: 302 QYGELVHVKIPAGKRCGFVQFSDRSCADEALRVLNGTQIGGQTIRLSWGRSPSNKQPQAD 361
           Q+GELVHVKIPAGKRCGFVQ+++R+CA++AL VLNGTQ+GGQ+IRLSWGRSPSNKQ Q D
Sbjct: 304 QFGELVHVKIPAGKRCGFVQYANRACAEQALSVLNGTQLGGQSIRLSWGRSPSNKQTQPD 363

Query: 362 PNQWNGGGGGGGGGGYYGY-GQGYENYSYAPAAQDPNMFYSGY--GGYGNYQQPGPQQPS 406
             Q+      GGGGGYYGY  QGYE Y YAP  QDPN +Y GY  GGYGNYQQPG  Q  
Sbjct: 364 QAQY------GGGGGYYGYPPQGYEAYGYAPPPQDPNAYYGGYAGGGYGNYQQPGGYQQQ 415

[Close]

BLAST of CmoCh13G007620 vs. ExPASy Swiss-Prot
Match: Q9FPJ8 (Polyadenylate-binding protein RBP45A OS=Arabidopsis thaliana OX=3702 GN=RBP45A PE=2 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 1.2e-117
Identity = 233/388 (60.05%), Postives = 275/388 (70.88%), Query Frame = 0


Query: 22  QQPPYMMMPPQPPQTQPVPQMWPQQPQAASPQGQ------PPQPASGDEVRTLWIGDLQY 81
           QQ  +MMM  Q        Q   Q   +A+P GQ         P S  +V++LWIGDLQ 
Sbjct: 18  QQHLWMMMQQQ--------QQQQQMQLSAAPLGQHQYGIGSQNPGSASDVKSLWIGDLQQ 77

Query: 82  WMDENALFNCFAHTGEISSVKVIRNKQTGQSEGYGFIEFLTRPAAERVLQTYNGTPMPIG 141
           WMDEN + + FA +GE +S KVIRNK TGQSEGYGFIEF++   AERVLQTYNG PMP  
Sbjct: 78  WMDENYIMSVFAQSGEATSAKVIRNKLTGQSEGYGFIEFVSHSVAERVLQTYNGAPMPST 137

Query: 142 AQNFRLNW--ASAGEKR-QDDSPEYTIFVGDLAGDVTDYVLQETFRGRYTSVKGAKVVID 201
            Q FRLNW  A AGEKR Q + P++TIFVGDLA +VTDY+L +TF+  Y SVKGAKVV+D
Sbjct: 138 EQTFRLNWAQAGAGEKRFQTEGPDHTIFVGDLAPEVTDYMLSDTFKNVYGSVKGAKVVLD 197

Query: 202 RLTGRTKGYGFVKFGDETEQMRAMTEMNGVICSSRPMRIGPAANKNTSGTQQYAKTSYQN 261
           R TGR+KGYGFV+F DE EQMRAMTEMNG  CS+RPMRIGPAANKN    Q      YQN
Sbjct: 198 RTTGRSKGYGFVRFADENEQMRAMTEMNGQYCSTRPMRIGPAANKNALPMQ---PAMYQN 257

Query: 262 PQGTQ-NENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGKRCGFVQFSDRS 321
            QG    +NDPNNTTIFVG LD+NVTD+ L+ +F Q+GEL+HVKIP GKRCGFVQ+++++
Sbjct: 258 TQGANAGDNDPNNTTIFVGGLDANVTDDELKSIFGQFGELLHVKIPPGKRCGFVQYANKA 317

Query: 322 CADEALRVLNGTQIGGQTIRLSWGRSPSNKQPQADPNQWNGGGGGGGGGGYYGY---GQG 381
            A+ AL VLNGTQ+GGQ+IRLSWGRSP+    Q+D  QWN       GGGYYGY    QG
Sbjct: 318 SAEHALSVLNGTQLGGQSIRLSWGRSPNK---QSDQAQWN-------GGGYYGYPPQPQG 377

Query: 382 YENYSYAPAAQDPNMFYSGYGGYGNYQQ 397
              Y+  P  QDPN +Y GY GYGNYQQ
Sbjct: 378 GYGYAAQPPTQDPNAYYGGYTGYGNYQQ 384

[Close]

BLAST of CmoCh13G007620 vs. ExPASy TrEMBL
Match: A0A6J1F4A1 (polyadenylate-binding protein RBP45-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111440051 PE=4 SV=1)

HSP 1 Score: 833.9 bits (2153), Expect = 5.4e-238
Identity = 410/411 (99.76%), Postives = 411/411 (100.00%), Query Frame = 0


Query: 1   MQPAPGVAPHNMPHQAPQYQQQQPPYMMMPPQPPQTQPVPQMWPQQPQAASPQGQPPQPA 60
           MQPAPGVAPHNMPHQAPQYQQQQPPYMMMPPQPPQTQPVPQMWPQQPQAASPQGQPPQPA
Sbjct: 1   MQPAPGVAPHNMPHQAPQYQQQQPPYMMMPPQPPQTQPVPQMWPQQPQAASPQGQPPQPA 60

Query: 61  SGDEVRTLWIGDLQYWMDENALFNCFAHTGEISSVKVIRNKQTGQSEGYGFIEFLTRPAA 120
           SGDEVRTLWIGDLQYWMDENALFNCFAHTGEISSVKVIRNKQTGQSEGYGFIEFLTRPAA
Sbjct: 61  SGDEVRTLWIGDLQYWMDENALFNCFAHTGEISSVKVIRNKQTGQSEGYGFIEFLTRPAA 120

Query: 121 ERVLQTYNGTPMPIGAQNFRLNWASAGEKRQDDSPEYTIFVGDLAGDVTDYVLQETFRGR 180
           ERVLQTYNGTPMPIGAQNFRLNWASAGEKRQDDSPEYTIFVGDLAGDVTDYVLQETFRGR
Sbjct: 121 ERVLQTYNGTPMPIGAQNFRLNWASAGEKRQDDSPEYTIFVGDLAGDVTDYVLQETFRGR 180

Query: 181 YTSVKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVICSSRPMRIGPAANKNTS 240
           YTSVKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVICSSRPMRIGPAANKNTS
Sbjct: 181 YTSVKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVICSSRPMRIGPAANKNTS 240

Query: 241 GTQQYAKTSYQNPQGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGK 300
           GTQQYAKTSYQNPQGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGK
Sbjct: 241 GTQQYAKTSYQNPQGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGK 300

Query: 301 RCGFVQFSDRSCADEALRVLNGTQIGGQTIRLSWGRSPSNKQPQADPNQWNGGGGGGGGG 360
           RCGFVQFSDRSCADEALRVLNGTQIGGQTIRLSWGRSPSNKQPQADPNQWNGGGGGGGGG
Sbjct: 301 RCGFVQFSDRSCADEALRVLNGTQIGGQTIRLSWGRSPSNKQPQADPNQWNGGGGGGGGG 360

Query: 361 GYYGYGQGYENYSYAPAAQDPNMFYSGYGGYGNYQQPGPQQPSQQQGGGYI 412
           GYYGYGQGYENYSYAPAAQDPNMFYSGYGGYGNYQQPGPQQPSQQQGGGY+
Sbjct: 361 GYYGYGQGYENYSYAPAAQDPNMFYSGYGGYGNYQQPGPQQPSQQQGGGYM 411

[Close]

BLAST of CmoCh13G007620 vs. ExPASy TrEMBL
Match: A0A6J1EYF4 (polyadenylate-binding protein RBP45-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111440051 PE=4 SV=1)

HSP 1 Score: 824.3 bits (2128), Expect = 4.3e-235
Identity = 408/411 (99.27%), Postives = 409/411 (99.51%), Query Frame = 0


Query: 1   MQPAPGVAPHNMPHQAPQYQQQQPPYMMMPPQPPQTQPVPQMWPQQPQAASPQGQPPQPA 60
           MQPAPGVAPHNMPHQAPQYQQQQPPYMMMPPQPPQTQPVPQMWPQQPQAASPQGQPPQPA
Sbjct: 1   MQPAPGVAPHNMPHQAPQYQQQQPPYMMMPPQPPQTQPVPQMWPQQPQAASPQGQPPQPA 60

Query: 61  SGDEVRTLWIGDLQYWMDENALFNCFAHTGEISSVKVIRNKQTGQSEGYGFIEFLTRPAA 120
           SGDEVRTLWIGDLQYWMDENALFNCFAHTGEISSVKVIRNKQTGQSEGYGFIEFLTRPAA
Sbjct: 61  SGDEVRTLWIGDLQYWMDENALFNCFAHTGEISSVKVIRNKQTGQSEGYGFIEFLTRPAA 120

Query: 121 ERVLQTYNGTPMPIGAQNFRLNWASAGEKRQDDSPEYTIFVGDLAGDVTDYVLQETFRGR 180
           ERVLQTYNGTPMPIGAQNFRLNWASAGEKRQDDSPEYTIFVGDLAGDVTDYVLQETFRGR
Sbjct: 121 ERVLQTYNGTPMPIGAQNFRLNWASAGEKRQDDSPEYTIFVGDLAGDVTDYVLQETFRGR 180

Query: 181 YTSVKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVICSSRPMRIGPAANKNTS 240
           YTSVKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVICSSRPMRIGPAANKNTS
Sbjct: 181 YTSVKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVICSSRPMRIGPAANKNTS 240

Query: 241 GTQQYAKTSYQNPQGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGK 300
           GTQQYAKTSYQNPQGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGK
Sbjct: 241 GTQQYAKTSYQNPQGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGK 300

Query: 301 RCGFVQFSDRSCADEALRVLNGTQIGGQTIRLSWGRSPSNKQPQADPNQWNGGGGGGGGG 360
           RCGFVQFSDRSCADEALRVLNGTQIGGQTIRLSWGRSPSNK  QADPNQWNGGGGGGGGG
Sbjct: 301 RCGFVQFSDRSCADEALRVLNGTQIGGQTIRLSWGRSPSNK--QADPNQWNGGGGGGGGG 360

Query: 361 GYYGYGQGYENYSYAPAAQDPNMFYSGYGGYGNYQQPGPQQPSQQQGGGYI 412
           GYYGYGQGYENYSYAPAAQDPNMFYSGYGGYGNYQQPGPQQPSQQQGGGY+
Sbjct: 361 GYYGYGQGYENYSYAPAAQDPNMFYSGYGGYGNYQQPGPQQPSQQQGGGYM 409

[Close]

BLAST of CmoCh13G007620 vs. ExPASy TrEMBL
Match: A0A6J1EZ41 (polyadenylate-binding protein RBP45-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111440051 PE=4 SV=1)

HSP 1 Score: 811.2 bits (2094), Expect = 3.8e-231
Identity = 402/411 (97.81%), Postives = 403/411 (98.05%), Query Frame = 0


Query: 1   MQPAPGVAPHNMPHQAPQYQQQQPPYMMMPPQPPQTQPVPQMWPQQPQAASPQGQPPQPA 60
           MQPAPGVAPHNMPHQAPQYQQQQPPYMMMPPQPPQTQPVPQMWPQQPQAASPQGQPPQPA
Sbjct: 1   MQPAPGVAPHNMPHQAPQYQQQQPPYMMMPPQPPQTQPVPQMWPQQPQAASPQGQPPQPA 60

Query: 61  SGDEVRTLWIGDLQYWMDENALFNCFAHTGEISSVKVIRNKQTGQSEGYGFIEFLTRPAA 120
           SGDEVRTLWIGDLQYWMDENALFNCFAHTGEISSVKVIRNKQTGQSEGYGFIEFLTRPAA
Sbjct: 61  SGDEVRTLWIGDLQYWMDENALFNCFAHTGEISSVKVIRNKQTGQSEGYGFIEFLTRPAA 120

Query: 121 ERVLQTYNGTPMPIGAQNFRLNWASAGEKRQDDSPEYTIFVGDLAGDVTDYVLQETFRGR 180
           ERVLQTYNGTPMPIGAQNFRLNWASAGEKRQDDSPEYTIFVGDLAGDVTDYVLQETFRGR
Sbjct: 121 ERVLQTYNGTPMPIGAQNFRLNWASAGEKRQDDSPEYTIFVGDLAGDVTDYVLQETFRGR 180

Query: 181 YTSVKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVICSSRPMRIGPAANKNTS 240
           YTSVKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVICSSRPMRIGPAANKNTS
Sbjct: 181 YTSVKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVICSSRPMRIGPAANKNTS 240

Query: 241 GTQQYAKTSYQNPQGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGK 300
                   SYQNPQGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGK
Sbjct: 241 -------ASYQNPQGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGK 300

Query: 301 RCGFVQFSDRSCADEALRVLNGTQIGGQTIRLSWGRSPSNKQPQADPNQWNGGGGGGGGG 360
           RCGFVQFSDRSCADEALRVLNGTQIGGQTIRLSWGRSPSNKQPQADPNQWNGGGGGGGGG
Sbjct: 301 RCGFVQFSDRSCADEALRVLNGTQIGGQTIRLSWGRSPSNKQPQADPNQWNGGGGGGGGG 360

Query: 361 GYYGYGQGYENYSYAPAAQDPNMFYSGYGGYGNYQQPGPQQPSQQQGGGYI 412
           GYYGYGQGYENYSYAPAAQDPNMFYSGYGGYGNYQQPGPQQPSQQQGGGY+
Sbjct: 361 GYYGYGQGYENYSYAPAAQDPNMFYSGYGGYGNYQQPGPQQPSQQQGGGYM 404

[Close]

BLAST of CmoCh13G007620 vs. ExPASy TrEMBL
Match: A0A6J1KQ19 (polyadenylate-binding protein RBP45-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111495451 PE=4 SV=1)

HSP 1 Score: 809.3 bits (2089), Expect = 1.4e-230
Identity = 399/411 (97.08%), Postives = 402/411 (97.81%), Query Frame = 0


Query: 1   MQPAPGVAPHNMPHQAPQYQQQQPPYMMMPPQPPQTQPVPQMWPQQPQAASPQGQPPQPA 60
           MQPAPGVAPHNMPHQAPQYQQQQ PYMMMPPQPPQTQPVPQMWPQQPQ ASPQGQPPQPA
Sbjct: 1   MQPAPGVAPHNMPHQAPQYQQQQTPYMMMPPQPPQTQPVPQMWPQQPQTASPQGQPPQPA 60

Query: 61  SGDEVRTLWIGDLQYWMDENALFNCFAHTGEISSVKVIRNKQTGQSEGYGFIEFLTRPAA 120
           SGDEVRTLWIGDLQYWMDENALFNCFAHTGEISSVKVIRNKQTGQSEGYGFIEFLTRPAA
Sbjct: 61  SGDEVRTLWIGDLQYWMDENALFNCFAHTGEISSVKVIRNKQTGQSEGYGFIEFLTRPAA 120

Query: 121 ERVLQTYNGTPMPIGAQNFRLNWASAGEKRQDDSPEYTIFVGDLAGDVTDYVLQETFRGR 180
           ERVLQTYNGTPMPIGAQNFRLNWASAGEKRQDDSPEYTIFVGDLAGDVTDYVLQETFR R
Sbjct: 121 ERVLQTYNGTPMPIGAQNFRLNWASAGEKRQDDSPEYTIFVGDLAGDVTDYVLQETFRAR 180

Query: 181 YTSVKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVICSSRPMRIGPAANKNTS 240
           YTSVKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVICSSRPMRIGPAANKNTS
Sbjct: 181 YTSVKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVICSSRPMRIGPAANKNTS 240

Query: 241 GTQQYAKTSYQNPQGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGK 300
           GTQQYAKTSYQNPQG+QNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGK
Sbjct: 241 GTQQYAKTSYQNPQGSQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGK 300

Query: 301 RCGFVQFSDRSCADEALRVLNGTQIGGQTIRLSWGRSPSNKQPQADPNQWNGGGGGGGGG 360
           RCGFVQFSDRSCADEALR+LNGTQIGGQTIRLSWGRSPSNKQPQADPNQWN      GGG
Sbjct: 301 RCGFVQFSDRSCADEALRMLNGTQIGGQTIRLSWGRSPSNKQPQADPNQWN------GGG 360

Query: 361 GYYGYGQGYENYSYAPAAQDPNMFYSGYGGYGNYQQPGPQQPSQQQGGGYI 412
           GYYGYGQGYENYSYAPAAQDPNMFYSGYGGYGNYQQPGPQQPSQQQGGGY+
Sbjct: 361 GYYGYGQGYENYSYAPAAQDPNMFYSGYGGYGNYQQPGPQQPSQQQGGGYM 405

[Close]

BLAST of CmoCh13G007620 vs. ExPASy TrEMBL
Match: A0A6J1KM98 (polyadenylate-binding protein RBP45-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111495451 PE=4 SV=1)

HSP 1 Score: 799.7 bits (2064), Expect = 1.1e-227
Identity = 397/411 (96.59%), Postives = 400/411 (97.32%), Query Frame = 0


Query: 1   MQPAPGVAPHNMPHQAPQYQQQQPPYMMMPPQPPQTQPVPQMWPQQPQAASPQGQPPQPA 60
           MQPAPGVAPHNMPHQAPQYQQQQ PYMMMPPQPPQTQPVPQMWPQQPQ ASPQGQPPQPA
Sbjct: 1   MQPAPGVAPHNMPHQAPQYQQQQTPYMMMPPQPPQTQPVPQMWPQQPQTASPQGQPPQPA 60

Query: 61  SGDEVRTLWIGDLQYWMDENALFNCFAHTGEISSVKVIRNKQTGQSEGYGFIEFLTRPAA 120
           SGDEVRTLWIGDLQYWMDENALFNCFAHTGEISSVKVIRNKQTGQSEGYGFIEFLTRPAA
Sbjct: 61  SGDEVRTLWIGDLQYWMDENALFNCFAHTGEISSVKVIRNKQTGQSEGYGFIEFLTRPAA 120

Query: 121 ERVLQTYNGTPMPIGAQNFRLNWASAGEKRQDDSPEYTIFVGDLAGDVTDYVLQETFRGR 180
           ERVLQTYNGTPMPIGAQNFRLNWASAGEKRQDDSPEYTIFVGDLAGDVTDYVLQETFR R
Sbjct: 121 ERVLQTYNGTPMPIGAQNFRLNWASAGEKRQDDSPEYTIFVGDLAGDVTDYVLQETFRAR 180

Query: 181 YTSVKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVICSSRPMRIGPAANKNTS 240
           YTSVKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVICSSRPMRIGPAANKNTS
Sbjct: 181 YTSVKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVICSSRPMRIGPAANKNTS 240

Query: 241 GTQQYAKTSYQNPQGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGK 300
           GTQQYAKTSYQNPQG+QNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGK
Sbjct: 241 GTQQYAKTSYQNPQGSQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGK 300

Query: 301 RCGFVQFSDRSCADEALRVLNGTQIGGQTIRLSWGRSPSNKQPQADPNQWNGGGGGGGGG 360
           RCGFVQFSDRSCADEALR+LNGTQIGGQTIRLSWGRSPSNK  QADPNQWN      GGG
Sbjct: 301 RCGFVQFSDRSCADEALRMLNGTQIGGQTIRLSWGRSPSNK--QADPNQWN------GGG 360

Query: 361 GYYGYGQGYENYSYAPAAQDPNMFYSGYGGYGNYQQPGPQQPSQQQGGGYI 412
           GYYGYGQGYENYSYAPAAQDPNMFYSGYGGYGNYQQPGPQQPSQQQGGGY+
Sbjct: 361 GYYGYGQGYENYSYAPAAQDPNMFYSGYGGYGNYQQPGPQQPSQQQGGGYM 403

[Close]

BLAST of CmoCh13G007620 vs. NCBI nr
Match: KAG6584082.1 (Polyadenylate-binding protein RBP45, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1446.0 bits (3742), Expect = 0.0e+00
Identity = 734/794 (92.44%), Postives = 736/794 (92.70%), Query Frame = 0


Query: 1   MQPAPGVAPHNMPHQAPQYQQQQPPYMMMPPQPPQTQPVPQMWPQQPQAASPQGQPPQPA 60
           MQPAPGVAPHNMPHQAPQYQQQQPPYMMMPPQPPQTQPVPQMWPQQPQAASPQGQPPQPA
Sbjct: 1   MQPAPGVAPHNMPHQAPQYQQQQPPYMMMPPQPPQTQPVPQMWPQQPQAASPQGQPPQPA 60

Query: 61  SGDEVRTLWIGDLQYWMDENALFNCFAHTGEISSVKVIRNKQTGQSEGYGFIEFLTRPAA 120
           SGDEVRTLWIGDLQYWMDENALFNCFAHTGEISSVKVIRNKQTGQSEGYGFIEFLTRPAA
Sbjct: 61  SGDEVRTLWIGDLQYWMDENALFNCFAHTGEISSVKVIRNKQTGQSEGYGFIEFLTRPAA 120

Query: 121 ERVLQTYNGTPMPIGAQNFRLNWASAGEKRQDDSPEYTIFVGDLAGDVTDYVLQETFRGR 180
           ERVLQTYNGTPMPIGAQNFRLNWASAGEKRQDDSPEYTIFVGDLAGDVTDYVLQETFRGR
Sbjct: 121 ERVLQTYNGTPMPIGAQNFRLNWASAGEKRQDDSPEYTIFVGDLAGDVTDYVLQETFRGR 180

Query: 181 YTSVKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVICSSRPMRIGPAANKNTS 240
           YTSVKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVICSSRPMRIGPAANKNTS
Sbjct: 181 YTSVKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVICSSRPMRIGPAANKNTS 240

Query: 241 GTQQYAKTSYQNPQGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGK 300
           GTQQYAKTSYQNPQGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGK
Sbjct: 241 GTQQYAKTSYQNPQGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGK 300

Query: 301 RCGFVQFSDRSCADEALRVLNGTQIGGQTIRLSWGRSPSNKQPQADPNQWNGGGGGGGGG 360
           RCGFVQFSDRSCADEALR LNGTQIGGQTIRLSWGRSPSNKQPQADPNQWN    GGGGG
Sbjct: 301 RCGFVQFSDRSCADEALRALNGTQIGGQTIRLSWGRSPSNKQPQADPNQWN----GGGGG 360

Query: 361 GYYGYGQGYENYSYAPAAQDPNMFYSGYGGYGNYQQPGPQQPSQQQGGGYICYSHLVSSH 420
           GYYGYGQGYENYSYAPAAQDPNMFYSGYGGYGNYQQPGPQQPSQQQGGG    +      
Sbjct: 361 GYYGYGQGYENYSYAPAAQDPNMFYSGYGGYGNYQQPGPQQPSQQQGGGRDTQT------ 420

Query: 421 LNDPIVILKKSADDNRKSKYSRAVGLGFLFVQTRHPNSLLSSSSSSSSSSSSLHKEILFP 480
                                    L FL               SSSSSSSSLHKEIL P
Sbjct: 421 -------------------------LFFL---------------SSSSSSSSLHKEILLP 480

Query: 481 FFETMQPAPGIAPHNMPHQAPQYQQQQPPYMMMPPQPPQPQPVPQMWPQQPQAASPQGQP 540
           FFE MQPAPGIAPHNMPHQAPQYQQQQPPYMMMPPQPPQPQPVPQMWPQQPQAASPQGQP
Sbjct: 481 FFEIMQPAPGIAPHNMPHQAPQYQQQQPPYMMMPPQPPQPQPVPQMWPQQPQAASPQGQP 540

Query: 541 SQPANADEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFLEFLT 600
           SQPANADEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFLEFLT
Sbjct: 541 SQPANADEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFLEFLT 600

Query: 601 RPAAERVLQAYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQET 660
           RPAAERVLQAYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQET
Sbjct: 601 RPAAERVLQAYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVLQET 660

Query: 661 FRARYTSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVVCSSRPMRIGPAAN 720
           FRARYTSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGV+CSSRPMRIGPAAN
Sbjct: 661 FRARYTSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVLCSSRPMRIGPAAN 720

Query: 721 KNTSGSQQYAKNSYQNPQGTQNESDPNNTTIFVGNLDSNVTDDHLRQVFGQYGELVHVKI 780
           KNTSGSQQYAKNSYQNPQGTQNESDPNNTTIFVGNLDSNVTDDHLRQVFGQYGELVHVKI
Sbjct: 721 KNTSGSQQYAKNSYQNPQGTQNESDPNNTTIFVGNLDSNVTDDHLRQVFGQYGELVHVKI 744

Query: 781 PVGKRCGFVQFSDR 795
           PVGKRCGFVQFSDR
Sbjct: 781 PVGKRCGFVQFSDR 744

[Close]

BLAST of CmoCh13G007620 vs. NCBI nr
Match: DAD49751.1 (TPA_asm: hypothetical protein HUJ06_032059 [Nelumbo nucifera])

HSP 1 Score: 835.9 bits (2158), Expect = 3.0e-238
Identity = 468/767 (61.02%), Postives = 518/767 (67.54%), Query Frame = 0


Query: 1   MQPAPGV-----APHNMPHQAPQYQQQQPP----YMMMPP--------------QPPQTQ 60
           MQPA GV      P  M  Q  Q+ QQQPP    +MMMPP              QPPQ Q
Sbjct: 2   MQPATGVVPPPMVPPQMDQQHQQHPQQQPPPQQQWMMMPPQQPLQPQPPPVWNQQPPQVQ 61

Query: 61  PVPQMWPQ--QPQAASPQGQ------PPQPASGDEVRTLWIGDLQYWMDENALFNCFAHT 120
             PQ+ PQ  QPQA  PQ Q      P QP S DEVRTLWIGDLQYWM+E+ + +CFAHT
Sbjct: 62  Q-PQVPPQQPQPQAQQPQPQPQHQYPPTQPTSADEVRTLWIGDLQYWMEESYIHSCFAHT 121

Query: 121 GEISSVKVIRNKQTGQSEGYGFIEFLTRPAAERVLQTYNGTPMPIGAQNFRLNWAS--AG 180
           GE++SVKVIRNKQTGQSEGYGFIEF+TRPAAER+LQTYNGT MP   QNFRLNWAS   G
Sbjct: 122 GEVASVKVIRNKQTGQSEGYGFIEFVTRPAAERILQTYNGTLMPNAEQNFRLNWASFGLG 181

Query: 181 EKRQDDSPEYTIFVGDLAGDVTDYVLQETFRGRYTSVKGAKVVIDRLTGRTKGYGFVKFG 240
           E+R DDS ++TIFVGDLA DVTDY+LQETFR  Y SVKGAKVV DR TGR+KGYGFV+FG
Sbjct: 182 ERRPDDSADFTIFVGDLASDVTDYMLQETFRSHYPSVKGAKVVTDRTTGRSKGYGFVRFG 241

Query: 241 DETEQMRAMTEMNGVICSSRPMRIGPAANKNTSGTQQYAKTSYQNPQGTQNENDPNNTTI 300
           DE+EQ+RAMTEMNG+ CS+RPMRIGPA  K   G QQY+K  YQN QGTQNENDPNNTTI
Sbjct: 242 DESEQIRAMTEMNGIFCSTRPMRIGPATTKKNVGGQQYSKAPYQNTQGTQNENDPNNTTI 301

Query: 301 FVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGKRCGFVQFSDRSCADEALRVLNGTQIGG 360
           FVG LDSNVTD+HLRQVFSQ+GELVHVKIP GKRCGFVQF +R+CA+EAL +LNGTQ+GG
Sbjct: 302 FVGGLDSNVTDDHLRQVFSQFGELVHVKIPVGKRCGFVQFVNRACAEEALLMLNGTQLGG 361

Query: 361 QTIRLSWGRSPSNKQPQADPNQWNGGGGGGGGGGYYGYGQGYENYSYAPAAQDPNMF-YS 420
           Q IRLSWGRSPS+KQPQ DPNQWN        GGYYGYGQGYE Y YAP  QDPNM+ Y 
Sbjct: 362 QNIRLSWGRSPSSKQPQPDPNQWN--------GGYYGYGQGYEAYGYAPPPQDPNMYAYG 421

Query: 421 GYGGYGNYQQPGPQQPSQQQGGGYICYSHLVSSHLNDPIVILKKSADDNRKSKYSRAVGL 480
            Y GYGNYQQ  PQ P QQ                                         
Sbjct: 422 AYPGYGNYQQQ-PQVPPQQ----------------------------------------- 481

Query: 481 GFLFVQTRHPNSLLSSSSSSSSSSSSLHKEILFPFFETMQPAPGIAPHNMPHQAPQYQQQ 540
                                                                 PQ    
Sbjct: 482 ------------------------------------------------------PQ---- 541

Query: 541 QPPYMMMPPQPPQPQPVPQMWPQQPQAASPQGQPSQPANADEVRTLWIGDLQYWMDENYI 600
                   PQ  QPQP PQ           Q  P+QP +ADEVRTLWIGDLQYWM+E+YI
Sbjct: 542 --------PQAQQPQPQPQ----------HQYPPTQPTSADEVRTLWIGDLQYWMEESYI 601

Query: 601 FNCFAHTGEVSSVKVIRNKQTGQSEGYGFLEFLTRPAAERVLQAYNGTAMPNGAQNFRLN 660
            +CFAHTGEV+SVKVIRNKQTGQSEGYGF+EF+TRPAAER+LQ YNGT MPN  QNFRLN
Sbjct: 602 HSCFAHTGEVASVKVIRNKQTGQSEGYGFIEFVTRPAAERILQTYNGTLMPNAEQNFRLN 641

Query: 661 WAS--AGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYTSVKGAKVVIDRLTGRTKG 720
           WAS   GE+R DDS D+TIFVGDLA DVTDY+LQETFR+ Y SVKGAKVV DR TGR+KG
Sbjct: 662 WASFGLGERRPDDSADFTIFVGDLASDVTDYMLQETFRSHYPSVKGAKVVTDRTTGRSKG 641

Query: 721 YGFVKFGDESEQMRAMTEMNGVVCSSRPMRIGPAANKNTSGSQQYAK 732
           YGFV+FGDESEQ+RAMTEMNG+ CS+RPMRIGPA  K   G QQY+K
Sbjct: 722 YGFVRFGDESEQIRAMTEMNGIFCSTRPMRIGPATTKKNVGGQQYSK 641

[Close]

BLAST of CmoCh13G007620 vs. NCBI nr
Match: XP_022933200.1 (polyadenylate-binding protein RBP45-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 833.9 bits (2153), Expect = 1.1e-237
Identity = 410/411 (99.76%), Postives = 411/411 (100.00%), Query Frame = 0


Query: 1   MQPAPGVAPHNMPHQAPQYQQQQPPYMMMPPQPPQTQPVPQMWPQQPQAASPQGQPPQPA 60
           MQPAPGVAPHNMPHQAPQYQQQQPPYMMMPPQPPQTQPVPQMWPQQPQAASPQGQPPQPA
Sbjct: 1   MQPAPGVAPHNMPHQAPQYQQQQPPYMMMPPQPPQTQPVPQMWPQQPQAASPQGQPPQPA 60

Query: 61  SGDEVRTLWIGDLQYWMDENALFNCFAHTGEISSVKVIRNKQTGQSEGYGFIEFLTRPAA 120
           SGDEVRTLWIGDLQYWMDENALFNCFAHTGEISSVKVIRNKQTGQSEGYGFIEFLTRPAA
Sbjct: 61  SGDEVRTLWIGDLQYWMDENALFNCFAHTGEISSVKVIRNKQTGQSEGYGFIEFLTRPAA 120

Query: 121 ERVLQTYNGTPMPIGAQNFRLNWASAGEKRQDDSPEYTIFVGDLAGDVTDYVLQETFRGR 180
           ERVLQTYNGTPMPIGAQNFRLNWASAGEKRQDDSPEYTIFVGDLAGDVTDYVLQETFRGR
Sbjct: 121 ERVLQTYNGTPMPIGAQNFRLNWASAGEKRQDDSPEYTIFVGDLAGDVTDYVLQETFRGR 180

Query: 181 YTSVKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVICSSRPMRIGPAANKNTS 240
           YTSVKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVICSSRPMRIGPAANKNTS
Sbjct: 181 YTSVKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVICSSRPMRIGPAANKNTS 240

Query: 241 GTQQYAKTSYQNPQGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGK 300
           GTQQYAKTSYQNPQGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGK
Sbjct: 241 GTQQYAKTSYQNPQGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGK 300

Query: 301 RCGFVQFSDRSCADEALRVLNGTQIGGQTIRLSWGRSPSNKQPQADPNQWNGGGGGGGGG 360
           RCGFVQFSDRSCADEALRVLNGTQIGGQTIRLSWGRSPSNKQPQADPNQWNGGGGGGGGG
Sbjct: 301 RCGFVQFSDRSCADEALRVLNGTQIGGQTIRLSWGRSPSNKQPQADPNQWNGGGGGGGGG 360

Query: 361 GYYGYGQGYENYSYAPAAQDPNMFYSGYGGYGNYQQPGPQQPSQQQGGGYI 412
           GYYGYGQGYENYSYAPAAQDPNMFYSGYGGYGNYQQPGPQQPSQQQGGGY+
Sbjct: 361 GYYGYGQGYENYSYAPAAQDPNMFYSGYGGYGNYQQPGPQQPSQQQGGGYM 411

[Close]

BLAST of CmoCh13G007620 vs. NCBI nr
Match: XP_022933201.1 (polyadenylate-binding protein RBP45-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 824.3 bits (2128), Expect = 8.9e-235
Identity = 408/411 (99.27%), Postives = 409/411 (99.51%), Query Frame = 0


Query: 1   MQPAPGVAPHNMPHQAPQYQQQQPPYMMMPPQPPQTQPVPQMWPQQPQAASPQGQPPQPA 60
           MQPAPGVAPHNMPHQAPQYQQQQPPYMMMPPQPPQTQPVPQMWPQQPQAASPQGQPPQPA
Sbjct: 1   MQPAPGVAPHNMPHQAPQYQQQQPPYMMMPPQPPQTQPVPQMWPQQPQAASPQGQPPQPA 60

Query: 61  SGDEVRTLWIGDLQYWMDENALFNCFAHTGEISSVKVIRNKQTGQSEGYGFIEFLTRPAA 120
           SGDEVRTLWIGDLQYWMDENALFNCFAHTGEISSVKVIRNKQTGQSEGYGFIEFLTRPAA
Sbjct: 61  SGDEVRTLWIGDLQYWMDENALFNCFAHTGEISSVKVIRNKQTGQSEGYGFIEFLTRPAA 120

Query: 121 ERVLQTYNGTPMPIGAQNFRLNWASAGEKRQDDSPEYTIFVGDLAGDVTDYVLQETFRGR 180
           ERVLQTYNGTPMPIGAQNFRLNWASAGEKRQDDSPEYTIFVGDLAGDVTDYVLQETFRGR
Sbjct: 121 ERVLQTYNGTPMPIGAQNFRLNWASAGEKRQDDSPEYTIFVGDLAGDVTDYVLQETFRGR 180

Query: 181 YTSVKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVICSSRPMRIGPAANKNTS 240
           YTSVKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVICSSRPMRIGPAANKNTS
Sbjct: 181 YTSVKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVICSSRPMRIGPAANKNTS 240

Query: 241 GTQQYAKTSYQNPQGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGK 300
           GTQQYAKTSYQNPQGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGK
Sbjct: 241 GTQQYAKTSYQNPQGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGK 300

Query: 301 RCGFVQFSDRSCADEALRVLNGTQIGGQTIRLSWGRSPSNKQPQADPNQWNGGGGGGGGG 360
           RCGFVQFSDRSCADEALRVLNGTQIGGQTIRLSWGRSPSNK  QADPNQWNGGGGGGGGG
Sbjct: 301 RCGFVQFSDRSCADEALRVLNGTQIGGQTIRLSWGRSPSNK--QADPNQWNGGGGGGGGG 360

Query: 361 GYYGYGQGYENYSYAPAAQDPNMFYSGYGGYGNYQQPGPQQPSQQQGGGYI 412
           GYYGYGQGYENYSYAPAAQDPNMFYSGYGGYGNYQQPGPQQPSQQQGGGY+
Sbjct: 361 GYYGYGQGYENYSYAPAAQDPNMFYSGYGGYGNYQQPGPQQPSQQQGGGYM 409

[Close]

BLAST of CmoCh13G007620 vs. NCBI nr
Match: XP_023518995.1 (polyadenylate-binding protein RBP45-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023518996.1 polyadenylate-binding protein RBP45-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 819.7 bits (2116), Expect = 2.2e-233
Identity = 404/411 (98.30%), Postives = 407/411 (99.03%), Query Frame = 0


Query: 1   MQPAPGVAPHNMPHQAPQYQQQQPPYMMMPPQPPQTQPVPQMWPQQPQAASPQGQPPQPA 60
           MQPAPGVAPHNMPHQAPQYQQQQPPYMMMPPQPPQTQPVPQMWPQQPQAASPQGQPPQPA
Sbjct: 1   MQPAPGVAPHNMPHQAPQYQQQQPPYMMMPPQPPQTQPVPQMWPQQPQAASPQGQPPQPA 60

Query: 61  SGDEVRTLWIGDLQYWMDENALFNCFAHTGEISSVKVIRNKQTGQSEGYGFIEFLTRPAA 120
           SGDEVRTLWIGDLQYWMDENALFNCFAHTGEISSVKVIRNKQTGQSEGYGFIEFLTRPAA
Sbjct: 61  SGDEVRTLWIGDLQYWMDENALFNCFAHTGEISSVKVIRNKQTGQSEGYGFIEFLTRPAA 120

Query: 121 ERVLQTYNGTPMPIGAQNFRLNWASAGEKRQDDSPEYTIFVGDLAGDVTDYVLQETFRGR 180
           ERVLQTYNGTPMPIGAQNFRLNWASAGEKRQDDSPEYTIFVGDLAGDVTDYVLQETFR R
Sbjct: 121 ERVLQTYNGTPMPIGAQNFRLNWASAGEKRQDDSPEYTIFVGDLAGDVTDYVLQETFRAR 180

Query: 181 YTSVKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVICSSRPMRIGPAANKNTS 240
           YTSVKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVICSSRPMRIGPAANKNTS
Sbjct: 181 YTSVKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVICSSRPMRIGPAANKNTS 240

Query: 241 GTQQYAKTSYQNPQGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGK 300
           GTQQYAKTSYQNPQGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGK
Sbjct: 241 GTQQYAKTSYQNPQGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGK 300

Query: 301 RCGFVQFSDRSCADEALRVLNGTQIGGQTIRLSWGRSPSNKQPQADPNQWNGGGGGGGGG 360
           RCGFVQFSDRSCADEALR+LNGTQIGGQTIRLSWGRSPSNKQPQADPNQWN   GGGGGG
Sbjct: 301 RCGFVQFSDRSCADEALRMLNGTQIGGQTIRLSWGRSPSNKQPQADPNQWN---GGGGGG 360

Query: 361 GYYGYGQGYENYSYAPAAQDPNMFYSGYGGYGNYQQPGPQQPSQQQGGGYI 412
           GYYGYGQGYENYSYAPA+QDPNMFYSGYGGYGNYQQPGPQQPSQQQGGGY+
Sbjct: 361 GYYGYGQGYENYSYAPASQDPNMFYSGYGGYGNYQQPGPQQPSQQQGGGYM 408

[Close]

BLAST of CmoCh13G007620 vs. TAIR 10
Match: AT1G11650.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 468.4 bits (1204), Expect = 1.2e-131
Identity = 268/424 (63.21%), Postives = 309/424 (72.88%), Query Frame = 0


Query: 2   QPAP-GVAPHNMPHQAPQYQQ-QQPPYMMMPPQPPQTQPVPQMWPQQPQAASPQGQPPQP 61
           QP P G+ PH+ P  + Q Q   Q PY +    PP     PQMW   PQAA+P     QP
Sbjct: 4   QPPPGGILPHHAPPPSAQQQYGYQQPYGIAGAAPPP----PQMW--NPQAAAPPS--VQP 63

Query: 62  ASGDEVRTLWIGDLQYWMDENALFNCFAHTGEISSVKVIRNKQTGQSEGYGFIEFLTRPA 121
            + DE+RTLWIGDLQYWMDEN L+ CFAHTGE+ S KVIRNKQTGQ EGYGFIEF +  A
Sbjct: 64  TTADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYGFIEFASHAA 123

Query: 122 AERVLQTYNGTPMP-IGAQNFRLNWA--SAGEKRQDDSPEYTIFVGDLAGDVTDYVLQET 181
           AERVLQT+N  P+P    Q FRLNWA  S+G+KR DDSP+YTIFVGDLA DVTDY+L ET
Sbjct: 124 AERVLQTFNNAPIPSFPDQLFRLNWASLSSGDKR-DDSPDYTIFVGDLAADVTDYILLET 183

Query: 182 FRGRYTSVKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVICSSRPMRIGPAAN 241
           FR  Y SVKGAKVVIDR+TGRTKGYGFV+F DE+EQ+RAMTEMNGV CS+RPMRIGPAA+
Sbjct: 184 FRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTRPMRIGPAAS 243

Query: 242 KNTSGTQQYAKTSYQ-NPQGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVK 301
           K     Q   + SYQ +  G   +NDPNNTT+FVG LD++VTD+HL+ VFSQYGE+VHVK
Sbjct: 244 KKGVTGQ---RDSYQSSAAGVTTDNDPNNTTVFVGGLDASVTDDHLKNVFSQYGEIVHVK 303

Query: 302 IPAGKRCGFVQFSDRSCADEALRVLNGTQIGGQTIRLSWGRSPSNKQPQADPNQWNGGGG 361
           IPAGKRCGFVQFS++SCA+EALR+LNG Q+GG T+RLSWGRSPSNKQ   DP+Q+     
Sbjct: 304 IPAGKRCGFVQFSEKSCAEEALRMLNGVQLGGTTVRLSWGRSPSNKQ-SGDPSQFY---- 363

Query: 362 GGGGGGYYGYGQGYENYSYAPAAQDPNMFYSGY--GGY-GNYQ------QPGPQQPSQQQ 411
                 Y GYGQG E Y Y    QDPN +Y GY  GGY G YQ      Q  PQQP QQQ
Sbjct: 364 ------YGGYGQGQEQYGYT-MPQDPNAYYGGYSGGGYSGGYQQTPQAGQQPPQQPPQQQ 403

[Close]

BLAST of CmoCh13G007620 vs. TAIR 10
Match: AT4G27000.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 461.5 bits (1186), Expect = 1.4e-129
Identity = 258/422 (61.14%), Postives = 295/422 (69.91%), Query Frame = 0


Query: 2   QPAP-----GVAPHNMPHQAPQYQQQQPPYMMMPPQPPQTQPVPQMWPQQ--PQAASPQ- 61
           QP P        P  +P     Y QQQ  +MM   Q  Q QP P  W QQ  P +  PQ 
Sbjct: 4   QPPPASNGAATGPGQIPSDQQAYLQQQQSWMMQHQQQQQGQP-PAGWNQQSAPSSGQPQQ 63

Query: 62  -----GQPPQPASGDEVRTLWIGDLQYWMDENALFNCFAHTGEISSVKVIRNKQTGQSEG 121
                G    P S  E+R+LWIGDLQ WMDEN L N F  TGE ++ KVIRNKQ G SEG
Sbjct: 64  QQYGGGGSQNPGSAGEIRSLWIGDLQPWMDENYLMNVFGLTGEATAAKVIRNKQNGYSEG 123

Query: 122 YGFIEFLTRPAAERVLQTYNGTPMPIGAQNFRLNWA--SAGEKRQDDSPEYTIFVGDLAG 181
           YGFIEF+    AER LQTYNG PMP   Q FRLNWA   AGE+RQ + PE+T+FVGDLA 
Sbjct: 124 YGFIEFVNHATAERNLQTYNGAPMPSSEQAFRLNWAQLGAGERRQAEGPEHTVFVGDLAP 183

Query: 182 DVTDYVLQETFRGRYTSVKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVICSS 241
           DVTD++L ETF+  Y+SVKGAKVV DR TGR+KGYGFV+F DE+EQ+RAMTEMNG  CSS
Sbjct: 184 DVTDHMLTETFKAVYSSVKGAKVVNDRTTGRSKGYGFVRFADESEQIRAMTEMNGQYCSS 243

Query: 242 RPMRIGPAANKNTSGTQQYAKTSYQNPQGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFS 301
           RPMR GPAANK     Q     SYQN QG   E+DP NTTIFVG +D +VT++ L+ VF 
Sbjct: 244 RPMRTGPAANKKPLTMQ---PASYQNTQGNSGESDPTNTTIFVGAVDQSVTEDDLKSVFG 303

Query: 302 QYGELVHVKIPAGKRCGFVQFSDRSCADEALRVLNGTQIGGQTIRLSWGRSPSNKQPQAD 361
           Q+GELVHVKIPAGKRCGFVQ+++R+CA++AL VLNGTQ+GGQ+IRLSWGRSPSNKQ Q D
Sbjct: 304 QFGELVHVKIPAGKRCGFVQYANRACAEQALSVLNGTQLGGQSIRLSWGRSPSNKQTQPD 363

Query: 362 PNQWNGGGGGGGGGGYYGY-GQGYENYSYAPAAQDPNMFYSGY--GGYGNYQQPGPQQPS 406
             Q+      GGGGGYYGY  QGYE Y YAP  QDPN +Y GY  GGYGNYQQPG  Q  
Sbjct: 364 QAQY------GGGGGYYGYPPQGYEAYGYAPPPQDPNAYYGGYAGGGYGNYQQPGGYQQQ 415

[Close]

BLAST of CmoCh13G007620 vs. TAIR 10
Match: AT5G54900.1 (RNA-binding protein 45A )

HSP 1 Score: 425.6 bits (1093), Expect = 8.6e-119
Identity = 233/388 (60.05%), Postives = 275/388 (70.88%), Query Frame = 0


Query: 22  QQPPYMMMPPQPPQTQPVPQMWPQQPQAASPQGQ------PPQPASGDEVRTLWIGDLQY 81
           QQ  +MMM  Q        Q   Q   +A+P GQ         P S  +V++LWIGDLQ 
Sbjct: 18  QQHLWMMMQQQ--------QQQQQMQLSAAPLGQHQYGIGSQNPGSASDVKSLWIGDLQQ 77

Query: 82  WMDENALFNCFAHTGEISSVKVIRNKQTGQSEGYGFIEFLTRPAAERVLQTYNGTPMPIG 141
           WMDEN + + FA +GE +S KVIRNK TGQSEGYGFIEF++   AERVLQTYNG PMP  
Sbjct: 78  WMDENYIMSVFAQSGEATSAKVIRNKLTGQSEGYGFIEFVSHSVAERVLQTYNGAPMPST 137

Query: 142 AQNFRLNW--ASAGEKR-QDDSPEYTIFVGDLAGDVTDYVLQETFRGRYTSVKGAKVVID 201
            Q FRLNW  A AGEKR Q + P++TIFVGDLA +VTDY+L +TF+  Y SVKGAKVV+D
Sbjct: 138 EQTFRLNWAQAGAGEKRFQTEGPDHTIFVGDLAPEVTDYMLSDTFKNVYGSVKGAKVVLD 197

Query: 202 RLTGRTKGYGFVKFGDETEQMRAMTEMNGVICSSRPMRIGPAANKNTSGTQQYAKTSYQN 261
           R TGR+KGYGFV+F DE EQMRAMTEMNG  CS+RPMRIGPAANKN    Q      YQN
Sbjct: 198 RTTGRSKGYGFVRFADENEQMRAMTEMNGQYCSTRPMRIGPAANKNALPMQ---PAMYQN 257

Query: 262 PQGTQ-NENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGKRCGFVQFSDRS 321
            QG    +NDPNNTTIFVG LD+NVTD+ L+ +F Q+GEL+HVKIP GKRCGFVQ+++++
Sbjct: 258 TQGANAGDNDPNNTTIFVGGLDANVTDDELKSIFGQFGELLHVKIPPGKRCGFVQYANKA 317

Query: 322 CADEALRVLNGTQIGGQTIRLSWGRSPSNKQPQADPNQWNGGGGGGGGGGYYGY---GQG 381
            A+ AL VLNGTQ+GGQ+IRLSWGRSP+    Q+D  QWN       GGGYYGY    QG
Sbjct: 318 SAEHALSVLNGTQLGGQSIRLSWGRSPNK---QSDQAQWN-------GGGYYGYPPQPQG 377

Query: 382 YENYSYAPAAQDPNMFYSGYGGYGNYQQ 397
              Y+  P  QDPN +Y GY GYGNYQQ
Sbjct: 378 GYGYAAQPPTQDPNAYYGGYTGYGNYQQ 384

[Close]

BLAST of CmoCh13G007620 vs. TAIR 10
Match: AT1G11650.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 378.3 bits (970), Expect = 1.6e-104
Identity = 208/315 (66.03%), Postives = 241/315 (76.51%), Query Frame = 0


Query: 2   QPAP-GVAPHNMPHQAPQYQQ-QQPPYMMMPPQPPQTQPVPQMWPQQPQAASPQGQPPQP 61
           QP P G+ PH+ P  + Q Q   Q PY +    PP     PQMW   PQAA+P     QP
Sbjct: 4   QPPPGGILPHHAPPPSAQQQYGYQQPYGIAGAAPPP----PQMW--NPQAAAPPS--VQP 63

Query: 62  ASGDEVRTLWIGDLQYWMDENALFNCFAHTGEISSVKVIRNKQTGQSEGYGFIEFLTRPA 121
            + DE+RTLWIGDLQYWMDEN L+ CFAHTGE+ S KVIRNKQTGQ EGYGFIEF +  A
Sbjct: 64  TTADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYGFIEFASHAA 123

Query: 122 AERVLQTYNGTPMP-IGAQNFRLNWA--SAGEKRQDDSPEYTIFVGDLAGDVTDYVLQET 181
           AERVLQT+N  P+P    Q FRLNWA  S+G+KR DDSP+YTIFVGDLA DVTDY+L ET
Sbjct: 124 AERVLQTFNNAPIPSFPDQLFRLNWASLSSGDKR-DDSPDYTIFVGDLAADVTDYILLET 183

Query: 182 FRGRYTSVKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMNGVICSSRPMRIGPAAN 241
           FR  Y SVKGAKVVIDR+TGRTKGYGFV+F DE+EQ+RAMTEMNGV CS+RPMRIGPAA+
Sbjct: 184 FRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTRPMRIGPAAS 243

Query: 242 KNTSGTQQYAKTSYQ-NPQGTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVK 301
           K     Q   + SYQ +  G   +NDPNNTT+FVG LD++VTD+HL+ VFSQYGE+VHVK
Sbjct: 244 KKGVTGQ---RDSYQSSAAGVTTDNDPNNTTVFVGGLDASVTDDHLKNVFSQYGEIVHVK 303

Query: 302 IPAGKRCGFVQFSDR 311
           IPAGKRCGFVQFS++
Sbjct: 304 IPAGKRCGFVQFSEK 306

[Close]

BLAST of CmoCh13G007620 vs. TAIR 10
Match: AT5G19350.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 370.9 bits (951), Expect = 2.5e-102
Identity = 209/384 (54.43%), Postives = 252/384 (65.62%), Query Frame = 0


Query: 42  MWPQQPQAASPQGQPPQPASGDEVRTLWIGDLQYWMDENALFNCFAHTGEISSVKVIRNK 101
           M P QP    PQG    P + +EVRTLWIGDLQYW+DEN L +CF+ TGE+ SVKVIRNK
Sbjct: 4   MHPPQP----PQGSYHHPQTLEEVRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNK 63

Query: 102 QTGQSEGYGFIEFLTRPAAERVLQTYNGTPMPIGAQNFRLNWASAGE-KRQDDSPEYTIF 161
            TGQ EGYGFIEF++  AAER LQTYNGT MP     FRLNWAS G  ++ D  P+++IF
Sbjct: 64  ITGQPEGYGFIEFISHAAAERTLQTYNGTQMPGTELTFRLNWASFGSGQKVDAGPDHSIF 123

Query: 162 VGDLAGDVTDYVLQETFRGRYTSVKGAKVVIDRLTGRTKGYGFVKFGDETEQMRAMTEMN 221
           VGDLA DVTDY+LQETFR  Y+SV+GAKVV D  TGR+KGYGFVKF +E+E+ RAM EMN
Sbjct: 124 VGDLAPDVTDYLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMN 183

Query: 222 GVICSSRPMRIGPAANKNTSGTQQYAKTSYQNPQG---------TQNENDPNNTTIFVGN 281
           G+ CS+RPMRI  A  K   G QQ   T    P              E+D   TTI V N
Sbjct: 184 GLYCSTRPMRISAATPKKNVGVQQQYVTKVTVPSAVAAPVQAYVAPPESDVTCTTISVAN 243

Query: 282 LDSNVTDEHLRQVFSQYGELVHVKIPAGKRCGFVQFSDRSCADEALRVLNGTQIGGQTIR 341
           LD NVT+E L++ FSQ GE+++VKIPA K  G+VQF  R  A+EA++ + G  IG Q +R
Sbjct: 244 LDQNVTEEELKKAFSQLGEVIYVKIPATKGYGYVQFKTRPSAEEAVQRMQGQVIGQQAVR 303

Query: 342 LSWGRSPSNK--QPQADPNQWNGGGGGGGGGGYYGYGQGYENYSYAPAAQDPNMFYSGYG 401
           +SW ++P       QADPNQWN         GYYGYGQGY+ Y+Y  A QDP+++   YG
Sbjct: 304 ISWSKNPGQDGWVTQADPNQWN---------GYYGYGQGYDAYAYG-ATQDPSVY--AYG 363

Query: 402 GYGNYQQP----GPQQPSQQQGGG 410
           GYG  Q P    G Q  S    GG
Sbjct: 364 GYGYPQYPQQGEGTQDISNSAAGG 371

The following BLAST results are available for this feature:

BLAST of CmoCh13G007620 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LEB4	3.3e-139	65.39	Polyadenylate-binding protein RBP45 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP4...	[more]
Q0J9Y2	7.3e-131	64.27	RNA-binding protein L OS=Oryza sativa subsp. japonica OX=39947 GN=RBP-L PE=1 SV=...	[more]
Q9SAB3	1.6e-130	63.21	Polyadenylate-binding protein RBP45B OS=Arabidopsis thaliana OX=3702 GN=RBP45B P...	[more]
Q93W34	2.0e-128	61.14	Polyadenylate-binding protein RBP45C OS=Arabidopsis thaliana OX=3702 GN=RBP45C P...	[more]
Q9FPJ8	1.2e-117	60.05	Polyadenylate-binding protein RBP45A OS=Arabidopsis thaliana OX=3702 GN=RBP45A P...	[more]

BLAST of CmoCh13G007620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F4A1	5.4e-238	99.76	polyadenylate-binding protein RBP45-like isoform X1 OS=Cucurbita moschata OX=366...	[more]
A0A6J1EYF4	4.3e-235	99.27	polyadenylate-binding protein RBP45-like isoform X2 OS=Cucurbita moschata OX=366...	[more]
A0A6J1EZ41	3.8e-231	97.81	polyadenylate-binding protein RBP45-like isoform X3 OS=Cucurbita moschata OX=366...	[more]
A0A6J1KQ19	1.4e-230	97.08	polyadenylate-binding protein RBP45-like isoform X1 OS=Cucurbita maxima OX=3661 ...	[more]
A0A6J1KM98	1.1e-227	96.59	polyadenylate-binding protein RBP45-like isoform X2 OS=Cucurbita maxima OX=3661 ...	[more]

BLAST of CmoCh13G007620 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6584082.1	0.0e+00	92.44	Polyadenylate-binding protein RBP45, partial [Cucurbita argyrosperma subsp. soro...	[more]
DAD49751.1	3.0e-238	61.02	TPA_asm: hypothetical protein HUJ06_032059 [Nelumbo nucifera]	[more]
XP_022933200.1	1.1e-237	99.76	polyadenylate-binding protein RBP45-like isoform X1 [Cucurbita moschata]	[more]
XP_022933201.1	8.9e-235	99.27	polyadenylate-binding protein RBP45-like isoform X2 [Cucurbita moschata]	[more]
XP_023518995.1	2.2e-233	98.30	polyadenylate-binding protein RBP45-like isoform X1 [Cucurbita pepo subsp. pepo]...	[more]

BLAST of CmoCh13G007620 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G11650.2	1.2e-131	63.21	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G27000.1	1.4e-129	61.14	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G54900.1	8.6e-119	60.05	RNA-binding protein 45A	[more]
AT1G11650.1	1.6e-104	66.03	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G19350.2	2.5e-102	54.43	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 551..626 e-value: 9.6E-13 score: 58.3 coord: 266..333 e-value: 2.2E-23 score: 93.7 coord: 750..794 e-value: 1.5 score: 4.9 coord: 158..232 e-value: 1.5E-17 score: 74.3 coord: 642..716 e-value: 6.3E-18 score: 75.6 coord: 67..142 e-value: 1.0E-14 score: 64.9
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 751..793 e-value: 7.4E-10 score: 38.5 coord: 159..228 e-value: 1.7E-11 score: 43.8 coord: 643..712 e-value: 1.4E-11 score: 44.0 coord: 68..130 e-value: 1.2E-12 score: 47.5 coord: 267..331 e-value: 1.9E-17 score: 62.8 coord: 552..616 e-value: 1.3E-11 score: 44.1
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 641..720 score: 16.124914
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 749..794 score: 12.867332
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 265..337 score: 18.205673
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 157..236 score: 15.903193
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 66..146 score: 15.971415
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 550..630 score: 15.391531
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 236..375 e-value: 1.5E-30 score: 108.1
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 9..154 e-value: 2.9E-24 score: 87.6 coord: 492..638 e-value: 1.7E-22 score: 81.8
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 723..794 e-value: 2.0E-16 score: 62.0
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 640..716 e-value: 2.3E-19 score: 71.3 coord: 156..232 e-value: 6.8E-19 score: 69.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..60
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 232..264
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..63
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 713..748
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 508..529
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 489..545
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 330..349
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 330..354
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 530..545
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 716..748
None	No IPR available	PANTHER	PTHR47640:SF48	POLYADENYLATE-BINDING PROTEIN RBP45B	coord: 17..402 coord: 501..794
None	No IPR available	PANTHER	PTHR47640	TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED	coord: 17..402 coord: 501..794
None	No IPR available	CDD	cd12345	RRM2_SECp43_like	coord: 640..719 e-value: 2.09436E-46 score: 157.826
None	No IPR available	CDD	cd12345	RRM2_SECp43_like	coord: 156..235 e-value: 1.38957E-45 score: 155.515
None	No IPR available	CDD	cd12346	RRM3_NGR1_NAM8_like	coord: 264..335 e-value: 1.46785E-36 score: 129.731
None	No IPR available	CDD	cd12344	RRM1_SECp43_like	coord: 67..145 e-value: 5.2499E-42 score: 145.483
None	No IPR available	CDD	cd12344	RRM1_SECp43_like	coord: 551..629 e-value: 5.8892E-44 score: 150.876
None	No IPR available	SUPERFAMILY	81995	beta-sandwich domain of Sec23/24	coord: 479..545
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 549..722
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 64..239
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 732..794
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 248..366

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh13G007620.1	CmoCh13G007620.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding