CmoCh13G007060 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTCTAGGGCTCATCGTTGCCCCCAAATTCTCTGTTTTTGTTGACTCTCGTGTGCATCTTAGATCGATCGAGTTTGAGATTGGCAGAAAAATATGCCTCAGAGACACTCGAAGAACAATAACGATCTAGCCTTCTTCACCTATGATGAGAAGCGGAAGCTCGGTTATGGAACCCAGAAAGAGAGACTTGGAAAGGACTCGATCAAGCCCTTCGATGTCTGCTGCCTGTGCTTGAAACCCTTCATCGACCCCATGTGCTGCCAGAAGGGCCACACGTTTTGTAAAGAATGCATTCTTGAATGCCTTTTGGCTCAGAAGAAAGATAATAAGAGGTTTGTTACTTTTACAATACTTGTATGTTTACATTTGATTGCTTGCTCCTTTTTTTTTTTTGTATCTCCCTCCCCAAGTTTGAAACAATTGTTTAAAAATGTACGAAGAAGTGGAGAGCGAGTGGTTCAGATTCTTGTAAACTCTTTGGCGTTGGTGTGCTAGAGTGGTGCGTGCAATTCCAATTTCTTCATGTAGTTGGATAGTAATCGAATTATAATCGTTTATTGCATTTTCTGAGTCCTTAAGTTGTCTGCTTCGGTTGTCTGTGTTGGTTCCTGCTTTTTGAAGAATTTGTTATTGCTTTGGTCTTTAAAGGGTGAAATTTTGATCTTAATTTGTGGTCAATTGTCTGGGATCATGATAAGTAACTTTTAAGGAAATGCGATGTTTCTAACCAACCTGGGCTGGCCTAGCGACCAATTAAGGTCAATGTAAATAAAACAAGATTTAGAGATAACGGGTTCAAATCATAATGGCCTATGAGATATCTTAGCACCCAAATGTAGTAGTGTGGACAGTTGTCTCTGTTAGACGAACACGACTCTCCACAATGGTATGATATTGTCCACTTTGGAGTTAGTATTCCTCACTTATAAACCCATGATCATTCCCTACATTAGCCGATGTGGGACTTCCATCATCCAACACCTCCCCTCGAACAAAGTGCTTGACTCCTTTGGAGTCTTAGTCATTTTTTACTGTCTTCGAGGAGGCTTGGTGACACAATCGCGCTTTCGAAGGCAGCGGACTAGCGATTGTGCGGCACTCACTTTCCAGCGACAAGTGAGTTAAGCCTATTTGTTTTTGCGTCGCCTACGGCCAAGCGACGTACGGTCGAGCCTCTAGCCTCGGTTTTAAAAGAAGGTTTTAGAAAACGAGGAGAGAGAGAGATTTTAGAAAGAGAGATTTTAGAAAGAGACGTTATATAAGCAAGCAAGAGAAGGATAACAACGGCTTAGCCTATAGTACATTCTGGGCCATTTTAGTTCTGGCAGGCCTAGACATGATATTTTTGAGGTGTCATACGCTCTAGAATTACAAAAGGAAAAACACTAGAATGAAAAGACATGACAAGGGTTTGGCTTGTCATGGGCATGCGGCCATGGGCAACATGTCCTGGACAAGCATGACCGTGACACTTGGCTCCTTTTCTTTTGGAGTTCTTTGTTCTTTACCAATCTATCGGCACGACTAAGTTTAGGGCATGGCTTTGATACCATGTTAGACGAATACGACTCTCAATGGAGTTAGTATTCCTCACTTATAAACCCATGATCATTCCCTAAATTAGCCGATGTGGGACTTCCATCATCCAACAGTCTCAAGCTAGGAATGTGACTATGATGTGCTTTCGTTATGCCTTATAATGATGTGTAGGAAATTGGTAGGCCTAATGTAAATTTCATTTTCCATAAACCACTTCATTTCACTTGTATTTCCTACCTTTTTAGTTATAGGCTCAAAAGTATTTGATGCTATTGACTATAGCAGTCTTCAGTATAACGAAGATTAAAGAACGCTTTGTGGAATGTGCAGGTTGTATTTACCTTAATGACTTATACTATTCATGAGGTTTTAGGGAAAGCTAATGAACAAAGAAGCAACAATCTAGTATAAAATGTTATGGTATTGATTGACTAATATGGTGGGAATTTAGATTAAAAATTAGTTGAGGCTTGTAATTGGTGTAAATATTAGACTCGCTTATGTAATAGGGTGATTAGAACATTGTAGGAGTGCATGTTTTAAATGCGAGAGAATTTTGAAAACATAGTAGTAGAATGTATATTTTCCATTTTTGATGCTATGCAGTACGGTCCTTTTAATGATGTTCGTCATAAATACCCTTCTCATGCCTCATGAGCATGTTTTGTTACCTTGCAGGAGGCTTGCTGCATTTACAACTCAGCAGAAGCAAGAGAAGGAAGAAGCAGAAGAGAAACTGATGCAGCAGAAAGCTAGAGAGCTTGATGCATTTGATCAGCAAAACCATGGTGCTGTACCACAATACAACGATCGAAACCACAGTCGGGATAAGAATGGTTTCCATGGTGCAAATAGTGTAAAGGTTACTTCTTACGAAGAAGAAGCACTTCGGAACATGAAGGCATTTTGGCTTCCTTCCGCTACACCAGAAGCTCCTGTTAAAGTAGGAGCCCCTTCGTGCAGTACATTCTGTCCCGAAGGCAACGAGAAACTTAAGCTAAAGTCCCTATTCCCAATACATTTCACAGAGGACAAAAGCGAGCAGAAGAAATCAAAATCTTATGATGTTACATACATATGCCCTAGTTGTAAGGTTACTCTAACCAACACGATGTCTCTCGTCGCCCTAAGCACGTGTGGCCATGTCTTCTGTAAGAAATGTGCTGATAAGTTTATGGCTGTGGACAAGGTATGTCTGGTCTGCAACAAAGGATGTAAAGTAAGGGATTTGGTGAATTTGGAGAAAGGAGGCACAGGGTTTGCTGGCCACGGGGATTCACTTGAAGCAAGAGACTTCAAGCATTTGGGAAGCGGTTCTGGTTTGGGGCTGGTGAGGCCTGCCATGAAGACTTAAAGTCAGTCATCCTTGCTTACTTGATTGTGATTTTCTTCCATAATTCTGTTTCTTTTTCTCAACTAATTAGTATCTGGTCTTGTAAATGACAATATCAATCTTAAATCTTAGTATGTTAGCTTCTAAATTGTGTCTTTATCAACAAGAATCTTGAAAAAAATGATAATATCCAAAGCTTGGAGGCTGTTTCTTATTTGCTGGTAGCTCCTTTTGTTGTCAATGGACCGCAATTCCGTGGTTCAGAATCTCGTCCCTGTAACTCTCTCGCGTAAATAAATGTTCTGCAATGAAACACTG TTTCTAGGGCTCATCGTTGCCCCCAAATTCTCTGTTTTTGTTGACTCTCGTGTGCATCTTAGATCGATCGAGTTTGAGATTGGCAGAAAAATATGCCTCAGAGACACTCGAAGAACAATAACGATCTAGCCTTCTTCACCTATGATGAGAAGCGGAAGCTCGGTTATGGAACCCAGAAAGAGAGACTTGGAAAGGACTCGATCAAGCCCTTCGATGTCTGCTGCCTGTGCTTGAAACCCTTCATCGACCCCATGTGCTGCCAGAAGGGCCACACGTTTTGTAAAGAATGCATTCTTGAATGCCTTTTGGCTCAGAAGAAAGATAATAAGAGGAGGCTTGCTGCATTTACAACTCAGCAGAAGCAAGAGAAGGAAGAAGCAGAAGAGAAACTGATGCAGCAGAAAGCTAGAGAGCTTGATGCATTTGATCAGCAAAACCATGGTGCTGTACCACAATACAACGATCGAAACCACAGTCGGGATAAGAATGGTTTCCATGGTGCAAATAGTGTAAAGGTTACTTCTTACGAAGAAGAAGCACTTCGGAACATGAAGGCATTTTGGCTTCCTTCCGCTACACCAGAAGCTCCTGTTAAAGTAGGAGCCCCTTCGTGCAGTACATTCTGTCCCGAAGGCAACGAGAAACTTAAGCTAAAGTCCCTATTCCCAATACATTTCACAGAGGACAAAAGCGAGCAGAAGAAATCAAAATCTTATGATGTTACATACATATGCCCTAGTTGTAAGGTTACTCTAACCAACACGATGTCTCTCGTCGCCCTAAGCACGTGTGGCCATGTCTTCTGTAAGAAATGTGCTGATAAGTTTATGGCTGTGGACAAGGTATGTCTGGTCTGCAACAAAGGATGTAAAGTAAGGGATTTGGTGAATTTGGAGAAAGGAGGCACAGGGTTTGCTGGCCACGGGGATTCACTTGAAGCAAGAGACTTCAAGCATTTGGGAAGCGGTTCTGGTTTGGGGCTGGTGAGGCCTGCCATGAAGACTTAAAGTCAGTCATCCTTGCTTACTTGATTGTGATTTTCTTCCATAATTCTGTTTCTTTTTCTCAACTAATTAGTATCTGGTCTTGTAAATGACAATATCAATCTTAAATCTTAGTATGTTAGCTTCTAAATTGTGTCTTTATCAACAAGAATCTTGAAAAAAATGATAATATCCAAAGCTTGGAGGCTGTTTCTTATTTGCTGGTAGCTCCTTTTGTTGTCAATGGACCGCAATTCCGTGGTTCAGAATCTCGTCCCTGTAACTCTCTCGCGTAAATAAATGTTCTGCAATGAAACACTG ATGCCTCAGAGACACTCGAAGAACAATAACGATCTAGCCTTCTTCACCTATGATGAGAAGCGGAAGCTCGGTTATGGAACCCAGAAAGAGAGACTTGGAAAGGACTCGATCAAGCCCTTCGATGTCTGCTGCCTGTGCTTGAAACCCTTCATCGACCCCATGTGCTGCCAGAAGGGCCACACGTTTTGTAAAGAATGCATTCTTGAATGCCTTTTGGCTCAGAAGAAAGATAATAAGAGGAGGCTTGCTGCATTTACAACTCAGCAGAAGCAAGAGAAGGAAGAAGCAGAAGAGAAACTGATGCAGCAGAAAGCTAGAGAGCTTGATGCATTTGATCAGCAAAACCATGGTGCTGTACCACAATACAACGATCGAAACCACAGTCGGGATAAGAATGGTTTCCATGGTGCAAATAGTGTAAAGGTTACTTCTTACGAAGAAGAAGCACTTCGGAACATGAAGGCATTTTGGCTTCCTTCCGCTACACCAGAAGCTCCTGTTAAAGTAGGAGCCCCTTCGTGCAGTACATTCTGTCCCGAAGGCAACGAGAAACTTAAGCTAAAGTCCCTATTCCCAATACATTTCACAGAGGACAAAAGCGAGCAGAAGAAATCAAAATCTTATGATGTTACATACATATGCCCTAGTTGTAAGGTTACTCTAACCAACACGATGTCTCTCGTCGCCCTAAGCACGTGTGGCCATGTCTTCTGTAAGAAATGTGCTGATAAGTTTATGGCTGTGGACAAGGTATGTCTGGTCTGCAACAAAGGATGTAAAGTAAGGGATTTGGTGAATTTGGAGAAAGGAGGCACAGGGTTTGCTGGCCACGGGGATTCACTTGAAGCAAGAGACTTCAAGCATTTGGGAAGCGGTTCTGGTTTGGGGCTGGTGAGGCCTGCCATGAAGACTTAA MPQRHSKNNNDLAFFTYDEKRKLGYGTQKERLGKDSIKPFDVCCLCLKPFIDPMCCQKGHTFCKECILECLLAQKKDNKRRLAAFTTQQKQEKEEAEEKLMQQKARELDAFDQQNHGAVPQYNDRNHSRDKNGFHGANSVKVTSYEEEALRNMKAFWLPSATPEAPVKVGAPSCSTFCPEGNEKLKLKSLFPIHFTEDKSEQKKSKSYDVTYICPSCKVTLTNTMSLVALSTCGHVFCKKCADKFMAVDKVCLVCNKGCKVRDLVNLEKGGTGFAGHGDSLEARDFKHLGSGSGLGLVRPAMKT Homology
BLAST of CmoCh13G007060 vs. ExPASy Swiss-Prot
Match: Q9SY88 (E3 ubiquitin-protein ligase CSU1 OS=Arabidopsis thaliana OX=3702 GN=CSU1 PE=1 SV=1) HSP 1 Score: 479.2 bits (1232), Expect = 3.5e-134 Identity = 233/307 (75.90%), Postives = 266/307 (86.64%), Query Frame = 0
BLAST of CmoCh13G007060 vs. ExPASy Swiss-Prot
Match: Q6P829 (Nitric oxide synthase-interacting protein OS=Xenopus tropicalis OX=8364 GN=nosip PE=2 SV=1) HSP 1 Score: 147.1 bits (370), Expect = 3.2e-34 Identity = 96/289 (33.22%), Postives = 150/289 (51.90%), Query Frame = 0
BLAST of CmoCh13G007060 vs. ExPASy Swiss-Prot
Match: Q6NUH3 (Nitric oxide synthase-interacting protein OS=Xenopus laevis OX=8355 GN=nosip PE=2 SV=1) HSP 1 Score: 146.7 bits (369), Expect = 4.1e-34 Identity = 96/289 (33.22%), Postives = 149/289 (51.56%), Query Frame = 0
BLAST of CmoCh13G007060 vs. ExPASy Swiss-Prot
Match: Q5U3S7 (Nitric oxide synthase-interacting protein OS=Danio rerio OX=7955 GN=nosip PE=2 SV=1) HSP 1 Score: 142.5 bits (358), Expect = 7.8e-33 Identity = 96/295 (32.54%), Postives = 152/295 (51.53%), Query Frame = 0
BLAST of CmoCh13G007060 vs. ExPASy Swiss-Prot
Match: Q55DU4 (Nitric oxide synthase-interacting protein homolog OS=Dictyostelium discoideum OX=44689 GN=nosip PE=2 SV=1) HSP 1 Score: 142.5 bits (358), Expect = 7.8e-33 Identity = 102/330 (30.91%), Postives = 153/330 (46.36%), Query Frame = 0
BLAST of CmoCh13G007060 vs. ExPASy TrEMBL
Match: A0A6J1EIH8 (E3 ubiquitin-protein ligase CSU1-like OS=Cucurbita moschata OX=3662 GN=LOC111434382 PE=3 SV=1) HSP 1 Score: 622.9 bits (1605), Expect = 7.3e-175 Identity = 304/304 (100.00%), Postives = 304/304 (100.00%), Query Frame = 0
BLAST of CmoCh13G007060 vs. ExPASy TrEMBL
Match: A0A6J1KI80 (E3 ubiquitin-protein ligase CSU1-like OS=Cucurbita maxima OX=3661 GN=LOC111495469 PE=3 SV=1) HSP 1 Score: 621.3 bits (1601), Expect = 2.1e-174 Identity = 303/304 (99.67%), Postives = 304/304 (100.00%), Query Frame = 0
BLAST of CmoCh13G007060 vs. ExPASy TrEMBL
Match: A0A5A7TEE0 (Nitric oxide synthase-interacting protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G001520 PE=3 SV=1) HSP 1 Score: 601.7 bits (1550), Expect = 1.7e-168 Identity = 293/304 (96.38%), Postives = 298/304 (98.03%), Query Frame = 0
BLAST of CmoCh13G007060 vs. ExPASy TrEMBL
Match: A0A0A0KF19 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G087940 PE=3 SV=1) HSP 1 Score: 600.5 bits (1547), Expect = 3.9e-168 Identity = 292/304 (96.05%), Postives = 298/304 (98.03%), Query Frame = 0
BLAST of CmoCh13G007060 vs. ExPASy TrEMBL
Match: A0A1S3CBW6 (nitric oxide synthase-interacting protein-like OS=Cucumis melo OX=3656 GN=LOC103498929 PE=3 SV=1) HSP 1 Score: 600.5 bits (1547), Expect = 3.9e-168 Identity = 292/304 (96.05%), Postives = 298/304 (98.03%), Query Frame = 0
BLAST of CmoCh13G007060 vs. NCBI nr
Match: XP_022927614.1 (E3 ubiquitin-protein ligase CSU1-like [Cucurbita moschata] >KAG6584040.1 E3 ubiquitin-protein ligase CSU1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019652.1 Nitric oxide synthase-interacting protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 622.9 bits (1605), Expect = 1.5e-174 Identity = 304/304 (100.00%), Postives = 304/304 (100.00%), Query Frame = 0
BLAST of CmoCh13G007060 vs. NCBI nr
Match: XP_023001296.1 (E3 ubiquitin-protein ligase CSU1-like [Cucurbita maxima]) HSP 1 Score: 621.3 bits (1601), Expect = 4.4e-174 Identity = 303/304 (99.67%), Postives = 304/304 (100.00%), Query Frame = 0
BLAST of CmoCh13G007060 vs. NCBI nr
Match: XP_023519621.1 (E3 ubiquitin-protein ligase CSU1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 619.8 bits (1597), Expect = 1.3e-173 Identity = 302/304 (99.34%), Postives = 304/304 (100.00%), Query Frame = 0
BLAST of CmoCh13G007060 vs. NCBI nr
Match: XP_038876326.1 (E3 ubiquitin-protein ligase CSU1-like [Benincasa hispida]) HSP 1 Score: 602.1 bits (1551), Expect = 2.7e-168 Identity = 293/304 (96.38%), Postives = 298/304 (98.03%), Query Frame = 0
BLAST of CmoCh13G007060 vs. NCBI nr
Match: KAA0039897.1 (nitric oxide synthase-interacting protein-like [Cucumis melo var. makuwa] >TYK24605.1 nitric oxide synthase-interacting protein-like [Cucumis melo var. makuwa]) HSP 1 Score: 601.7 bits (1550), Expect = 3.6e-168 Identity = 293/304 (96.38%), Postives = 298/304 (98.03%), Query Frame = 0
BLAST of CmoCh13G007060 vs. TAIR 10
Match: AT1G61620.1 (phosphoinositide binding ) HSP 1 Score: 479.2 bits (1232), Expect = 2.5e-135 Identity = 233/307 (75.90%), Postives = 266/307 (86.64%), Query Frame = 0
BLAST of CmoCh13G007060 vs. TAIR 10
Match: AT3G07200.1 (RING/U-box superfamily protein ) HSP 1 Score: 44.3 bits (103), Expect = 2.1e-04 Identity = 19/56 (33.93%), Postives = 29/56 (51.79%), Query Frame = 0
BLAST of CmoCh13G007060 vs. TAIR 10
Match: AT3G07200.2 (RING/U-box superfamily protein ) HSP 1 Score: 44.3 bits (103), Expect = 2.1e-04 Identity = 19/56 (33.93%), Postives = 29/56 (51.79%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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