CmoCh13G006460 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh13G006460
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionPentatricopeptide repeat-containing protein
LocationCmo_Chr13: 6867232 .. 6868650 (-)
RNA-Seq ExpressionCmoCh13G006460
SyntenyCmoCh13G006460
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCAGTAAAGCTATGTTTAAATGGGCAAAAACAGTCACACCTGCTCATGTTGAACAGCTAGTCCAAGCGGAACGAGACATAAACAAGGCACTTCTCATATTTGACTCTGCAACAGCCGAGTATACAAATGGTTTTAAGCATGATCTCAATACTTTTAGGCTCATGATTAGGAAGTTAGTTTCCGCAAACCAGTTCAGGTTAGCAGAAACACTTCTTGATAGGATGAAGGAAGAGAAATTTGATGTCACTGAGGATATATTTCTTTCTATTTGTAGGGCTTATGGTCGTGTCCATAGGCCATTGGATTCCATTAGAGTTTTCCATAAAATGCAGGATTTCCATTGCAAGCCTACAGAGAAATCTTACATTTCAGTGTTTGCCATTCTTGTTGAAGAAAATCAATTAAAATTGGCTTTTAGATTTTACAGGTATATGAGAAAAGTGGGTATTCCTCCTACTGTAGCTTCTCTTAATGTTCTAATCAAAGCCCTCTGTAAGAATAGTGGAACCATGGATAAAGCTATGAACATGTTTCGTGAAATGTCTAATCAGGGGTGTGAACCTGATTCTTATACTTATGGGACTTTGATCAATGGGTTATGTAGATTTGGAAACATTGTTGAAGCAAAGGAATTATTGCAAGAGATGGAAAAAAAAGGCTGTTCACCTTCAGTCATCACCTATACTTCAATGATACATGGTCTGTGTCAGTTGAACAATGTGGATGAAGCAATGGACTTACTTGAAGATATGATGAGCAAGGGTATTGAACCTAATGTATTTACTTACAGTTCTCTAATGGATGGATTTTGTAAGGCTGGTCATTCTTTGCGAGCTAGAGACCTCTTGGAGTTGATGGTCCAAAAACGCTTGAGGCCCAACATGATCAGTTATAGCACATTGATTAATGGACTTTGTAAGGAAGGAAAACTAAATGAAGCGTTAGAGATTCTTGACAGAATGAAACTTCAAGGTTTGACACCAGATGCCGGATTGTATGGGAAAATAGTGAATCGCCTCTGTGATGTTTGCAGATTCCAAGAAGCTGCAAACTTCTTGGATGAGATGGTCCTTTGTGGGATTACACCTAATAGAGTAACATGGAGCCTTCATGTCAGGACGCATAACAGAGTAATTCACGGTCTCTGCACTGTCAACGACTCAAATCGTGCATTTCAGTTATATCTCAGTGTCCTGACACGTGGTATTAGTCTCACTGTTGATACTTTCGATTCGTTGTTGAAGTGCTTCTGTAACAAAAGGGATCTTCTTAAAATTTCTAGAATTCTGGATGAGATGGTGATTAATGGATGTATCCCTGAGAGAGAAATGTGGAGTACCGTTGTTAATTTTTTTTGTGATCAAAGAAAAGCTTGTGATGCTATGAAATTGCTGCAACTTGAGTTGATGAATTGA

mRNA sequence

ATGGGCAGTAAAGCTATGTTTAAATGGGCAAAAACAGTCACACCTGCTCATGTTGAACAGCTAGTCCAAGCGGAACGAGACATAAACAAGGCACTTCTCATATTTGACTCTGCAACAGCCGAGTATACAAATGGTTTTAAGCATGATCTCAATACTTTTAGGCTCATGATTAGGAAGTTAGTTTCCGCAAACCAGTTCAGGTTAGCAGAAACACTTCTTGATAGGATGAAGGAAGAGAAATTTGATGTCACTGAGGATATATTTCTTTCTATTTGTAGGGCTTATGGTCGTGTCCATAGGCCATTGGATTCCATTAGAGTTTTCCATAAAATGCAGGATTTCCATTGCAAGCCTACAGAGAAATCTTACATTTCAGTGTTTGCCATTCTTGTTGAAGAAAATCAATTAAAATTGGCTTTTAGATTTTACAGGTATATGAGAAAAGTGGGTATTCCTCCTACTGTAGCTTCTCTTAATGTTCTAATCAAAGCCCTCTGTAAGAATAGTGGAACCATGGATAAAGCTATGAACATGTTTCGTGAAATGTCTAATCAGGGGTGTGAACCTGATTCTTATACTTATGGGACTTTGATCAATGGGTTATGTAGATTTGGAAACATTGTTGAAGCAAAGGAATTATTGCAAGAGATGGAAAAAAAAGGCTGTTCACCTTCAGTCATCACCTATACTTCAATGATACATGGTCTGTGTCAGTTGAACAATGTGGATGAAGCAATGGACTTACTTGAAGATATGATGAGCAAGGGTATTGAACCTAATGTATTTACTTACAGTTCTCTAATGGATGGATTTTGTAAGGCTGGTCATTCTTTGCGAGCTAGAGACCTCTTGGAGTTGATGGTCCAAAAACGCTTGAGGCCCAACATGATCAGTTATAGCACATTGATTAATGGACTTTGTAAGGAAGGAAAACTAAATGAAGCGTTAGAGATTCTTGACAGAATGAAACTTCAAGGTTTGACACCAGATGCCGGATTGTATGGGAAAATAGTGAATCGCCTCTGTGATGTTTGCAGATTCCAAGAAGCTGCAAACTTCTTGGATGAGATGGTCCTTTGTGGGATTACACCTAATAGAGTAACATGGAGCCTTCATGTCAGGACGCATAACAGAGTAATTCACGGTCTCTGCACTGTCAACGACTCAAATCGTGCATTTCAGTTATATCTCAGTGTCCTGACACGTGGTATTAGTCTCACTGTTGATACTTTCGATTCGTTGTTGAAGTGCTTCTGTAACAAAAGGGATCTTCTTAAAATTTCTAGAATTCTGGATGAGATGGTGATTAATGGATGTATCCCTGAGAGAGAAATGTGGAGTACCGTTGTTAATTTTTTTTGTGATCAAAGAAAAGCTTGTGATGCTATGAAATTGCTGCAACTTGAGTTGATGAATTGA

Coding sequence (CDS)

ATGGGCAGTAAAGCTATGTTTAAATGGGCAAAAACAGTCACACCTGCTCATGTTGAACAGCTAGTCCAAGCGGAACGAGACATAAACAAGGCACTTCTCATATTTGACTCTGCAACAGCCGAGTATACAAATGGTTTTAAGCATGATCTCAATACTTTTAGGCTCATGATTAGGAAGTTAGTTTCCGCAAACCAGTTCAGGTTAGCAGAAACACTTCTTGATAGGATGAAGGAAGAGAAATTTGATGTCACTGAGGATATATTTCTTTCTATTTGTAGGGCTTATGGTCGTGTCCATAGGCCATTGGATTCCATTAGAGTTTTCCATAAAATGCAGGATTTCCATTGCAAGCCTACAGAGAAATCTTACATTTCAGTGTTTGCCATTCTTGTTGAAGAAAATCAATTAAAATTGGCTTTTAGATTTTACAGGTATATGAGAAAAGTGGGTATTCCTCCTACTGTAGCTTCTCTTAATGTTCTAATCAAAGCCCTCTGTAAGAATAGTGGAACCATGGATAAAGCTATGAACATGTTTCGTGAAATGTCTAATCAGGGGTGTGAACCTGATTCTTATACTTATGGGACTTTGATCAATGGGTTATGTAGATTTGGAAACATTGTTGAAGCAAAGGAATTATTGCAAGAGATGGAAAAAAAAGGCTGTTCACCTTCAGTCATCACCTATACTTCAATGATACATGGTCTGTGTCAGTTGAACAATGTGGATGAAGCAATGGACTTACTTGAAGATATGATGAGCAAGGGTATTGAACCTAATGTATTTACTTACAGTTCTCTAATGGATGGATTTTGTAAGGCTGGTCATTCTTTGCGAGCTAGAGACCTCTTGGAGTTGATGGTCCAAAAACGCTTGAGGCCCAACATGATCAGTTATAGCACATTGATTAATGGACTTTGTAAGGAAGGAAAACTAAATGAAGCGTTAGAGATTCTTGACAGAATGAAACTTCAAGGTTTGACACCAGATGCCGGATTGTATGGGAAAATAGTGAATCGCCTCTGTGATGTTTGCAGATTCCAAGAAGCTGCAAACTTCTTGGATGAGATGGTCCTTTGTGGGATTACACCTAATAGAGTAACATGGAGCCTTCATGTCAGGACGCATAACAGAGTAATTCACGGTCTCTGCACTGTCAACGACTCAAATCGTGCATTTCAGTTATATCTCAGTGTCCTGACACGTGGTATTAGTCTCACTGTTGATACTTTCGATTCGTTGTTGAAGTGCTTCTGTAACAAAAGGGATCTTCTTAAAATTTCTAGAATTCTGGATGAGATGGTGATTAATGGATGTATCCCTGAGAGAGAAATGTGGAGTACCGTTGTTAATTTTTTTTGTGATCAAAGAAAAGCTTGTGATGCTATGAAATTGCTGCAACTTGAGTTGATGAATTGA

Protein sequence

MGSKAMFKWAKTVTPAHVEQLVQAERDINKALLIFDSATAEYTNGFKHDLNTFRLMIRKLVSANQFRLAETLLDRMKEEKFDVTEDIFLSICRAYGRVHRPLDSIRVFHKMQDFHCKPTEKSYISVFAILVEENQLKLAFRFYRYMRKVGIPPTVASLNVLIKALCKNSGTMDKAMNMFREMSNQGCEPDSYTYGTLINGLCRFGNIVEAKELLQEMEKKGCSPSVITYTSMIHGLCQLNNVDEAMDLLEDMMSKGIEPNVFTYSSLMDGFCKAGHSLRARDLLELMVQKRLRPNMISYSTLINGLCKEGKLNEALEILDRMKLQGLTPDAGLYGKIVNRLCDVCRFQEAANFLDEMVLCGITPNRVTWSLHVRTHNRVIHGLCTVNDSNRAFQLYLSVLTRGISLTVDTFDSLLKCFCNKRDLLKISRILDEMVINGCIPEREMWSTVVNFFCDQRKACDAMKLLQLELMN
Homology
BLAST of CmoCh13G006460 vs. ExPASy Swiss-Prot
Match: Q9FNL2 (Pentatricopeptide repeat-containing protein At5g46100 OS=Arabidopsis thaliana OX=3702 GN=At5g46100 PE=2 SV=1)

HSP 1 Score: 599.4 bits (1544), Expect = 3.6e-170
Identity = 280/471 (59.45%), Postives = 369/471 (78.34%), Query Frame = 0

Query: 1   MGSKA-MFKWAKTVTPAHVEQLVQAERDINKALLIFDSATAEYTNGFKHDLNTFRLMIRK 60
           MGSK  MFKW+K +TP+ V +L++AE+D+ K++ +FDSATAEY NG+ HD ++F  M+ +
Sbjct: 1   MGSKVMMFKWSKNITPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLR 60

Query: 61  LVSANQFRLAETLLDRMKEEKFDVTEDIFLSICRAYGRVHRPLDSIRVFHKMQDFHCKPT 120
           LVSAN+F+ AE L+ RMK E   V+EDI LSICR YGRVHRP DS+RVFHKM+DF C P+
Sbjct: 61  LVSANKFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPS 120

Query: 121 EKSYISVFAILVEENQLKLAFRFYRYMRKVGIPPTVASLNVLIKALCKNSGTMDKAMNMF 180
           +K+Y++V AILVEENQL LAF+FY+ MR++G+PPTVASLNVLIKALC+N GT+D  + +F
Sbjct: 121 QKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIF 180

Query: 181 REMSNQGCEPDSYTYGTLINGLCRFGNIVEAKELLQEMEKKGCSPSVITYTSMIHGLCQL 240
            EM  +GC+PDSYTYGTLI+GLCRFG I EAK+L  EM +K C+P+V+TYTS+I+GLC  
Sbjct: 181 LEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGS 240

Query: 241 NNVDEAMDLLEDMMSKGIEPNVFTYSSLMDGFCKAGHSLRARDLLELMVQKRLRPNMISY 300
            NVDEAM  LE+M SKGIEPNVFTYSSLMDG CK G SL+A +L E+M+ +  RPNM++Y
Sbjct: 241 KNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTY 300

Query: 301 STLINGLCKEGKLNEALEILDRMKLQGLTPDAGLYGKIVNRLCDVCRFQEAANFLDEMVL 360
           +TLI GLCKE K+ EA+E+LDRM LQGL PDAGLYGK+++  C + +F+EAANFLDEM+L
Sbjct: 301 TTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMIL 360

Query: 361 CGITPNRVTWSLHVRTHNRVIHGLCTVNDSNRAFQLYLSVLTRGISLTVDTFDSLLKCFC 420
            GITPNR+TW++HV+T N V+ GLC  N  +RAF LYLS+ +RGIS+ V+T +SL+KC C
Sbjct: 361 GGITPNRLTWNIHVKTSNEVVRGLC-ANYPSRAFTLYLSMRSRGISVEVETLESLVKCLC 420

Query: 421 NKRDLLKISRILDEMVINGCIPEREMWSTVVNFFCDQRKACDAMKLLQLEL 471
            K +  K  +++DE+V +GCIP +  W  ++    D+    +A   L  +L
Sbjct: 421 KKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIGHTLDKTIVGEASDTLLRDL 470

BLAST of CmoCh13G006460 vs. ExPASy Swiss-Prot
Match: Q9CA58 (Putative pentatricopeptide repeat-containing protein At1g74580 OS=Arabidopsis thaliana OX=3702 GN=At1g74580 PE=3 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 8.6e-63
Identity = 139/455 (30.55%), Postives = 240/455 (52.75%), Query Frame = 0

Query: 15  PAHVEQLVQAERDINKALLIFDSATAEYTNGFKHDLNTFRLMIRKLVSANQFRLAETLLD 74
           P HV  +++ ++D  KAL +F+S   E   GFKH L+T+R +I KL    +F   E +L 
Sbjct: 7   PKHVTAVIKCQKDPMKALEMFNSMRKEV--GFKHTLSTYRSVIEKLGYYGKFEAMEEVLV 66

Query: 75  RMKEEKFD-VTEDIFLSICRAYGRVHRPLDSIRVFHKMQDFHCKPTEKSYISVFAILVEE 134
            M+E   + + E +++   + YGR  +  +++ VF +M  + C+PT  SY ++ ++LV+ 
Sbjct: 67  DMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDS 126

Query: 135 NQLKLAFRFYRYMRKVGIPPTVASLNVLIKALCKNSGTMDKAMNMFREMSNQGCEPDSYT 194
                A + Y  MR  GI P V S  + +K+ CK S     A+ +   MS+QGCE +   
Sbjct: 127 GYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTS-RPHAALRLLNNMSSQGCEMNVVA 186

Query: 195 YGTLINGLCRFGNIVEAKELLQEMEKKGCSPSVITYTSMIHGLCQLNNVDEAMDLLEDMM 254
           Y T++ G        E  EL  +M   G S  + T+  ++  LC+  +V E   LL+ ++
Sbjct: 187 YCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVI 246

Query: 255 SKGIEPNVFTYSSLMDGFCKAGHSLRARDLLELMVQKRLRPNMISYSTLINGLCKEGKLN 314
            +G+ PN+FTY+  + G C+ G    A  ++  ++++  +P++I+Y+ LI GLCK  K  
Sbjct: 247 KRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQ 306

Query: 315 EALEILDRMKLQGLTPDAGLYGKIVNRLCDVCRFQEAANFLDEMVLCGITPNRVTWSLHV 374
           EA   L +M  +GL PD+  Y  ++   C     Q A   + + V  G  P++       
Sbjct: 307 EAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQF------ 366

Query: 375 RTHNRVIHGLCTVNDSNRAFQLYLSVLTRGISLTVDTFDSLLKCFCNKRDLLKISRILDE 434
            T+  +I GLC   ++NRA  L+   L +GI   V  +++L+K   N+  +L+ +++ +E
Sbjct: 367 -TYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANE 426

Query: 435 MVINGCIPEREMWSTVVNFFCDQRKACDAMKLLQL 469
           M   G IPE + ++ +VN  C      DA  L+++
Sbjct: 427 MSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKV 451

BLAST of CmoCh13G006460 vs. ExPASy Swiss-Prot
Match: Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 6.2e-61
Identity = 128/428 (29.91%), Postives = 228/428 (53.27%), Query Frame = 0

Query: 45  GFKHDLNTFRLMIRKLVSANQFRLAETLLDRMKEEKFDVTEDI--FLSICRAYGRVHRPL 104
           G K D + +  M+  LV  N  +L E  +   K   + +  D+  F  + +A  R H+  
Sbjct: 149 GLKPDTHFYNRMLNLLVDGNSLKLVE--ISHAKMSVWGIKPDVSTFNVLIKALCRAHQLR 208

Query: 105 DSIRVFHKMQDFHCKPTEKSYISVFAILVEENQLKLAFRFYRYMRKVGIPPTVASLNVLI 164
            +I +   M  +   P EK++ +V    +EE  L  A R    M + G   +  S+NV++
Sbjct: 209 PAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIV 268

Query: 165 KALCKNSGTMDKAMNMFREMSNQ-GCEPDSYTYGTLINGLCRFGNIVEAKELLQEMEKKG 224
              CK  G ++ A+N  +EMSNQ G  PD YT+ TL+NGLC+ G++  A E++  M ++G
Sbjct: 269 HGFCK-EGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEG 328

Query: 225 CSPSVITYTSMIHGLCQLNNVDEAMDLLEDMMSKGIEPNVFTYSSLMDGFCKAGHSLRAR 284
             P V TY S+I GLC+L  V EA+++L+ M+++   PN  TY++L+   CK      A 
Sbjct: 329 YDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEAT 388

Query: 285 DLLELMVQKRLRPNMISYSTLINGLCKEGKLNEALEILDRMKLQGLTPDAGLYGKIVNRL 344
           +L  ++  K + P++ ++++LI GLC       A+E+ + M+ +G  PD   Y  +++ L
Sbjct: 389 ELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSL 448

Query: 345 CDVCRFQEAANFLDEMVLCGITPNRVTWSLHVRTHNRVIHGLCTVNDSNRAFQLYLSVLT 404
           C   +  EA N L +M L G   +       V T+N +I G C  N +  A +++  +  
Sbjct: 449 CSKGKLDEALNMLKQMELSGCARS-------VITYNTLIDGFCKANKTREAEEIFDEMEV 508

Query: 405 RGISLTVDTFDSLLKCFCNKRDLLKISRILDEMVINGCIPEREMWSTVVNFFC---DQRK 464
            G+S    T+++L+   C  R +   ++++D+M++ G  P++  +++++  FC   D +K
Sbjct: 509 HGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKK 566

Query: 465 ACDAMKLL 467
           A D ++ +
Sbjct: 569 AADIVQAM 566

BLAST of CmoCh13G006460 vs. ExPASy Swiss-Prot
Match: O49436 (Pentatricopeptide repeat-containing protein At4g20090 OS=Arabidopsis thaliana OX=3702 GN=EMB1025 PE=3 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 1.1e-60
Identity = 139/430 (32.33%), Postives = 223/430 (51.86%), Query Frame = 0

Query: 39  TAEYTNGFKHDLNTFRLMIRKLVSANQFRLAETLLDRMKEEKFDVTEDIFLSICRAYGRV 98
           +A     FK   +T   MI    ++  F   E LL R++ E   + E  F+ + RAYG+ 
Sbjct: 66  SAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKA 125

Query: 99  HRPLDSIRVFHKMQD-FHCKPTEKSYISVFAILVEENQLKLAFRFYRYM----RKVGIPP 158
           H P  ++ +FH+M D F CK + KS+ SV  +++ E        FY Y+      + I P
Sbjct: 126 HLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISP 185

Query: 159 TVASLNVLIKALCKNSGTMDKAMNMFREMSNQGCEPDSYTYGTLINGLCRFGNIVEAKEL 218
              S N++IKALCK    +D+A+ +FR M  + C PD YTY TL++GLC+   I EA  L
Sbjct: 186 NGLSFNLVIKALCK-LRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLL 245

Query: 219 LQEMEKKGCSPSVITYTSMIHGLCQLNNVDEAMDLLEDMMSKGIEPNVFTYSSLMDGFCK 278
           L EM+ +GCSPS + Y  +I GLC+  ++     L+++M  KG  PN  TY++L+ G C 
Sbjct: 246 LDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCL 305

Query: 279 AGHSLRARDLLELMVQKRLRPNMISYSTLINGLCKEGKLNEALEILDRMKLQGLTPDAGL 338
            G   +A  LLE MV  +  PN ++Y TLINGL K+ +  +A+ +L  M+ +G   +  +
Sbjct: 306 KGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHI 365

Query: 339 YGKIVNRLCDVCRFQEAANFLDEMVLCGITPNRVTWSLHVRTHNRVIHGLCTVNDSNRAF 398
           Y  +++ L    + +EA +   +M   G  PN V +S+       ++ GLC     N A 
Sbjct: 366 YSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSV-------LVDGLCREGKPNEAK 425

Query: 399 QLYLSVLTRGISLTVDTFDSLLKCFCNKRDLLKISRILDEMVINGCIPEREMWSTVVNFF 458
           ++   ++  G      T+ SL+K F       +  ++  EM   GC   +  +S +++  
Sbjct: 426 EILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGL 485

Query: 459 CDQRKACDAM 464
           C   +  +AM
Sbjct: 486 CGVGRVKEAM 487

BLAST of CmoCh13G006460 vs. ExPASy Swiss-Prot
Match: Q9M302 (Pentatricopeptide repeat-containing protein At3g48810 OS=Arabidopsis thaliana OX=3702 GN=At3g48810 PE=2 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 6.8e-60
Identity = 156/559 (27.91%), Postives = 263/559 (47.05%), Query Frame = 0

Query: 12  TVTPAHVE-------QLVQAERDINKALLIFDSATAEYTNGFKHDLNTFRLMIRKLVSAN 71
           T +P H E       + ++ E  +  AL  F S     +N FKH   TF +MIRKL    
Sbjct: 33  TESPNHAEIKELDVVKRLRQESCVPLALHFFKSIA--NSNLFKHTPLTFEVMIRKLAMDG 92

Query: 72  QFRLAETLLDRMKEEKFDVTEDIFLSICRAYGRVHRPLDSIRVFHKMQDFHCKPTEKSYI 131
           Q    + LL +MK + F  +ED+F+S+   Y +V     ++ +F+++++F C P+ K Y 
Sbjct: 93  QVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYN 152

Query: 132 SVFAILVEENQLKLAFRFYRYMRKVGIPPTVASLNVLIKALCKNSGTMDKAMNMFREMSN 191
            V   L+ EN++++ +  YR M++ G  P V + NVL+KALCKN+  +D A  +  EMSN
Sbjct: 153 HVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNN-KVDGAKKLLVEMSN 212

Query: 192 QGCEPD--SYT----------------------------YGTLINGLCRFGNIVEAKELL 251
           +GC PD  SYT                            Y  LINGLC+  +   A EL+
Sbjct: 213 KGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELM 272

Query: 252 QEMEKKGCSPSVITYTSMIHGLCQLNNVDEAMDLLEDMMSKGIEPNVFT----------- 311
           +EM +KG SP+VI+Y+++I+ LC    ++ A   L  M+ +G  PN++T           
Sbjct: 273 REMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLR 332

Query: 312 -------------------------YSSLMDGFCKAGHSLRARDLLELMVQKRLRPNMIS 371
                                    Y++L+ GFC  G+ ++A  +   M +    PN+ +
Sbjct: 333 GTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRT 392

Query: 372 YSTLINGLCKEGKLNEALEILDRMKLQGLTPDAGLYGKIVNRLCDVCRFQEAANFLDEMV 431
           Y +LING  K G L+ A+ I ++M   G  P+  +Y  +V  LC   +F+EA + ++ M 
Sbjct: 393 YGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMS 452

Query: 432 LCGITPNRVTWSLHVR-----------------------------THNRVIHGLCTVNDS 469
                P+  T++  ++                             T+N ++ GL   N  
Sbjct: 453 KENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRI 512

BLAST of CmoCh13G006460 vs. ExPASy TrEMBL
Match: A0A6J1EKD3 (pentatricopeptide repeat-containing protein At5g46100 OS=Cucurbita moschata OX=3662 GN=LOC111434127 PE=4 SV=1)

HSP 1 Score: 962.2 bits (2486), Expect = 7.9e-277
Identity = 472/472 (100.00%), Postives = 472/472 (100.00%), Query Frame = 0

Query: 1   MGSKAMFKWAKTVTPAHVEQLVQAERDINKALLIFDSATAEYTNGFKHDLNTFRLMIRKL 60
           MGSKAMFKWAKTVTPAHVEQLVQAERDINKALLIFDSATAEYTNGFKHDLNTFRLMIRKL
Sbjct: 1   MGSKAMFKWAKTVTPAHVEQLVQAERDINKALLIFDSATAEYTNGFKHDLNTFRLMIRKL 60

Query: 61  VSANQFRLAETLLDRMKEEKFDVTEDIFLSICRAYGRVHRPLDSIRVFHKMQDFHCKPTE 120
           VSANQFRLAETLLDRMKEEKFDVTEDIFLSICRAYGRVHRPLDSIRVFHKMQDFHCKPTE
Sbjct: 61  VSANQFRLAETLLDRMKEEKFDVTEDIFLSICRAYGRVHRPLDSIRVFHKMQDFHCKPTE 120

Query: 121 KSYISVFAILVEENQLKLAFRFYRYMRKVGIPPTVASLNVLIKALCKNSGTMDKAMNMFR 180
           KSYISVFAILVEENQLKLAFRFYRYMRKVGIPPTVASLNVLIKALCKNSGTMDKAMNMFR
Sbjct: 121 KSYISVFAILVEENQLKLAFRFYRYMRKVGIPPTVASLNVLIKALCKNSGTMDKAMNMFR 180

Query: 181 EMSNQGCEPDSYTYGTLINGLCRFGNIVEAKELLQEMEKKGCSPSVITYTSMIHGLCQLN 240
           EMSNQGCEPDSYTYGTLINGLCRFGNIVEAKELLQEMEKKGCSPSVITYTSMIHGLCQLN
Sbjct: 181 EMSNQGCEPDSYTYGTLINGLCRFGNIVEAKELLQEMEKKGCSPSVITYTSMIHGLCQLN 240

Query: 241 NVDEAMDLLEDMMSKGIEPNVFTYSSLMDGFCKAGHSLRARDLLELMVQKRLRPNMISYS 300
           NVDEAMDLLEDMMSKGIEPNVFTYSSLMDGFCKAGHSLRARDLLELMVQKRLRPNMISYS
Sbjct: 241 NVDEAMDLLEDMMSKGIEPNVFTYSSLMDGFCKAGHSLRARDLLELMVQKRLRPNMISYS 300

Query: 301 TLINGLCKEGKLNEALEILDRMKLQGLTPDAGLYGKIVNRLCDVCRFQEAANFLDEMVLC 360
           TLINGLCKEGKLNEALEILDRMKLQGLTPDAGLYGKIVNRLCDVCRFQEAANFLDEMVLC
Sbjct: 301 TLINGLCKEGKLNEALEILDRMKLQGLTPDAGLYGKIVNRLCDVCRFQEAANFLDEMVLC 360

Query: 361 GITPNRVTWSLHVRTHNRVIHGLCTVNDSNRAFQLYLSVLTRGISLTVDTFDSLLKCFCN 420
           GITPNRVTWSLHVRTHNRVIHGLCTVNDSNRAFQLYLSVLTRGISLTVDTFDSLLKCFCN
Sbjct: 361 GITPNRVTWSLHVRTHNRVIHGLCTVNDSNRAFQLYLSVLTRGISLTVDTFDSLLKCFCN 420

Query: 421 KRDLLKISRILDEMVINGCIPEREMWSTVVNFFCDQRKACDAMKLLQLELMN 473
           KRDLLKISRILDEMVINGCIPEREMWSTVVNFFCDQRKACDAMKLLQLELMN
Sbjct: 421 KRDLLKISRILDEMVINGCIPEREMWSTVVNFFCDQRKACDAMKLLQLELMN 472

BLAST of CmoCh13G006460 vs. ExPASy TrEMBL
Match: A0A6J1KLZ3 (pentatricopeptide repeat-containing protein At5g46100 OS=Cucurbita maxima OX=3661 GN=LOC111495767 PE=4 SV=1)

HSP 1 Score: 954.1 bits (2465), Expect = 2.1e-274
Identity = 465/472 (98.52%), Postives = 470/472 (99.58%), Query Frame = 0

Query: 1   MGSKAMFKWAKTVTPAHVEQLVQAERDINKALLIFDSATAEYTNGFKHDLNTFRLMIRKL 60
           MGSKAMFKWAKTVTPAHVEQL+QAERDINKALLIFDSATAEYTNGFKHDLNTFRLMIRKL
Sbjct: 1   MGSKAMFKWAKTVTPAHVEQLIQAERDINKALLIFDSATAEYTNGFKHDLNTFRLMIRKL 60

Query: 61  VSANQFRLAETLLDRMKEEKFDVTEDIFLSICRAYGRVHRPLDSIRVFHKMQDFHCKPTE 120
           VSANQFRLAETLLDRMKEEK DVTEDIFLSICRAYGR+HRPLDSIRVFHKMQDFHCKPTE
Sbjct: 61  VSANQFRLAETLLDRMKEEKLDVTEDIFLSICRAYGRIHRPLDSIRVFHKMQDFHCKPTE 120

Query: 121 KSYISVFAILVEENQLKLAFRFYRYMRKVGIPPTVASLNVLIKALCKNSGTMDKAMNMFR 180
           KSYISVFAILVEENQLKLAFRFYRYMRKVGIPPTVASLNVLIKALCKNSGTMDKAMNMFR
Sbjct: 121 KSYISVFAILVEENQLKLAFRFYRYMRKVGIPPTVASLNVLIKALCKNSGTMDKAMNMFR 180

Query: 181 EMSNQGCEPDSYTYGTLINGLCRFGNIVEAKELLQEMEKKGCSPSVITYTSMIHGLCQLN 240
           EMSNQGCEPDSYTYGTLINGLCRFGNIVEAKELLQEMEKKGCSPSV+TYTSMIHGLCQLN
Sbjct: 181 EMSNQGCEPDSYTYGTLINGLCRFGNIVEAKELLQEMEKKGCSPSVVTYTSMIHGLCQLN 240

Query: 241 NVDEAMDLLEDMMSKGIEPNVFTYSSLMDGFCKAGHSLRARDLLELMVQKRLRPNMISYS 300
           NVDEAMDLLEDMMSKGIEPNVFTYSSLMDGFCKAGHSLRARDLLELMVQKRLRPNMISYS
Sbjct: 241 NVDEAMDLLEDMMSKGIEPNVFTYSSLMDGFCKAGHSLRARDLLELMVQKRLRPNMISYS 300

Query: 301 TLINGLCKEGKLNEALEILDRMKLQGLTPDAGLYGKIVNRLCDVCRFQEAANFLDEMVLC 360
           TLINGLCKEGK+NEALEILDRMKLQGLTPDAGLYGKIVNRLCDVCRFQEAANFLDEMVLC
Sbjct: 301 TLINGLCKEGKVNEALEILDRMKLQGLTPDAGLYGKIVNRLCDVCRFQEAANFLDEMVLC 360

Query: 361 GITPNRVTWSLHVRTHNRVIHGLCTVNDSNRAFQLYLSVLTRGISLTVDTFDSLLKCFCN 420
           GITPNRVTWSLHVRTHNRVIHGLCTVNDSNRAFQLYLSVLTRGISLTVDTFDSLLKCFCN
Sbjct: 361 GITPNRVTWSLHVRTHNRVIHGLCTVNDSNRAFQLYLSVLTRGISLTVDTFDSLLKCFCN 420

Query: 421 KRDLLKISRILDEMVINGCIPEREMWSTVVNFFCDQRKACDAMKLLQLELMN 473
           KRDLLK+SRILDEMVINGCIPEREMWSTVVN FCDQRKACDAMKLLQLELMN
Sbjct: 421 KRDLLKVSRILDEMVINGCIPEREMWSTVVNCFCDQRKACDAMKLLQLELMN 472

BLAST of CmoCh13G006460 vs. ExPASy TrEMBL
Match: A0A6J1CDW1 (pentatricopeptide repeat-containing protein At5g46100 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010648 PE=4 SV=1)

HSP 1 Score: 866.7 bits (2238), Expect = 4.5e-248
Identity = 420/472 (88.98%), Postives = 442/472 (93.64%), Query Frame = 0

Query: 1   MGSKAMFKWAKTVTPAHVEQLVQAERDINKALLIFDSATAEYTNGFKHDLNTFRLMIRKL 60
           MGSKAMFKWAKTVTP+HVEQL+QAERDINKALLIFDSAT+EY NGFKHDLNTFRLMI KL
Sbjct: 20  MGSKAMFKWAKTVTPSHVEQLIQAERDINKALLIFDSATSEYANGFKHDLNTFRLMISKL 79

Query: 61  VSANQFRLAETLLDRMKEEKFDVTEDIFLSICRAYGRVHRPLDSIRVFHKMQDFHCKPTE 120
           VSANQFR AETLLDRM EEKFDVTEDIFL+ICRAYGRVH+PLDSIR+FHKM+DF CKPTE
Sbjct: 80  VSANQFRSAETLLDRMNEEKFDVTEDIFLTICRAYGRVHKPLDSIRIFHKMEDFQCKPTE 139

Query: 121 KSYISVFAILVEENQLKLAFRFYRYMRKVGIPPTVASLNVLIKALCKNSGTMDKAMNMFR 180
           KSYI+VFAILVEENQLKLA RFYRYMRK+G PPTVASLNVLIKA CKNSGTMDKAM++ R
Sbjct: 140 KSYITVFAILVEENQLKLALRFYRYMRKMGFPPTVASLNVLIKAFCKNSGTMDKAMHILR 199

Query: 181 EMSNQGCEPDSYTYGTLINGLCRFGNIVEAKELLQEMEKKGCSPSVITYTSMIHGLCQLN 240
           EMSN GCEPDSYTYGTLINGLC+ G IVEAKELLQEME KGCSPSV+TYTS+IHGLCQLN
Sbjct: 200 EMSNHGCEPDSYTYGTLINGLCKLGKIVEAKELLQEMETKGCSPSVVTYTSLIHGLCQLN 259

Query: 241 NVDEAMDLLEDMMSKGIEPNVFTYSSLMDGFCKAGHSLRARDLLELMVQKRLRPNMISYS 300
           NVDEA+ LLEDMM KGIEPNVFTYSSLMDGFCKAGHS RARDLLELMVQKRLRPNMISYS
Sbjct: 260 NVDEAVGLLEDMMGKGIEPNVFTYSSLMDGFCKAGHSSRARDLLELMVQKRLRPNMISYS 319

Query: 301 TLINGLCKEGKLNEALEILDRMKLQGLTPDAGLYGKIVNRLCDVCRFQEAANFLDEMVLC 360
           TLINGLCKEGKLNEALEILDRMKLQGL PDAGLYGKIVN LCD  RFQEAANFLDEMVL 
Sbjct: 320 TLINGLCKEGKLNEALEILDRMKLQGLKPDAGLYGKIVNGLCDTSRFQEAANFLDEMVLG 379

Query: 361 GITPNRVTWSLHVRTHNRVIHGLCTVNDSNRAFQLYLSVLTRGISLTVDTFDSLLKCFCN 420
           GITPNRVTWSLHVRTHNRVI GLCT+NDS+RAFQLYLSV TRGIS+TVDTFD LLKCFC 
Sbjct: 380 GITPNRVTWSLHVRTHNRVIDGLCTINDSSRAFQLYLSVQTRGISITVDTFDGLLKCFCK 439

Query: 421 KRDLLKISRILDEMVINGCIPEREMWSTVVNFFCDQRKACDAMKLLQLELMN 473
           KRDL K  RILDEMVINGCIP+RE+WSTVVN FCDQRK CDA+KLLQLELM+
Sbjct: 440 KRDLQKTYRILDEMVINGCIPQRELWSTVVNCFCDQRKTCDALKLLQLELMS 491

BLAST of CmoCh13G006460 vs. ExPASy TrEMBL
Match: A0A6J1CF14 (pentatricopeptide repeat-containing protein At5g46100 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111010648 PE=4 SV=1)

HSP 1 Score: 866.7 bits (2238), Expect = 4.5e-248
Identity = 420/472 (88.98%), Postives = 442/472 (93.64%), Query Frame = 0

Query: 1   MGSKAMFKWAKTVTPAHVEQLVQAERDINKALLIFDSATAEYTNGFKHDLNTFRLMIRKL 60
           MGSKAMFKWAKTVTP+HVEQL+QAERDINKALLIFDSAT+EY NGFKHDLNTFRLMI KL
Sbjct: 1   MGSKAMFKWAKTVTPSHVEQLIQAERDINKALLIFDSATSEYANGFKHDLNTFRLMISKL 60

Query: 61  VSANQFRLAETLLDRMKEEKFDVTEDIFLSICRAYGRVHRPLDSIRVFHKMQDFHCKPTE 120
           VSANQFR AETLLDRM EEKFDVTEDIFL+ICRAYGRVH+PLDSIR+FHKM+DF CKPTE
Sbjct: 61  VSANQFRSAETLLDRMNEEKFDVTEDIFLTICRAYGRVHKPLDSIRIFHKMEDFQCKPTE 120

Query: 121 KSYISVFAILVEENQLKLAFRFYRYMRKVGIPPTVASLNVLIKALCKNSGTMDKAMNMFR 180
           KSYI+VFAILVEENQLKLA RFYRYMRK+G PPTVASLNVLIKA CKNSGTMDKAM++ R
Sbjct: 121 KSYITVFAILVEENQLKLALRFYRYMRKMGFPPTVASLNVLIKAFCKNSGTMDKAMHILR 180

Query: 181 EMSNQGCEPDSYTYGTLINGLCRFGNIVEAKELLQEMEKKGCSPSVITYTSMIHGLCQLN 240
           EMSN GCEPDSYTYGTLINGLC+ G IVEAKELLQEME KGCSPSV+TYTS+IHGLCQLN
Sbjct: 181 EMSNHGCEPDSYTYGTLINGLCKLGKIVEAKELLQEMETKGCSPSVVTYTSLIHGLCQLN 240

Query: 241 NVDEAMDLLEDMMSKGIEPNVFTYSSLMDGFCKAGHSLRARDLLELMVQKRLRPNMISYS 300
           NVDEA+ LLEDMM KGIEPNVFTYSSLMDGFCKAGHS RARDLLELMVQKRLRPNMISYS
Sbjct: 241 NVDEAVGLLEDMMGKGIEPNVFTYSSLMDGFCKAGHSSRARDLLELMVQKRLRPNMISYS 300

Query: 301 TLINGLCKEGKLNEALEILDRMKLQGLTPDAGLYGKIVNRLCDVCRFQEAANFLDEMVLC 360
           TLINGLCKEGKLNEALEILDRMKLQGL PDAGLYGKIVN LCD  RFQEAANFLDEMVL 
Sbjct: 301 TLINGLCKEGKLNEALEILDRMKLQGLKPDAGLYGKIVNGLCDTSRFQEAANFLDEMVLG 360

Query: 361 GITPNRVTWSLHVRTHNRVIHGLCTVNDSNRAFQLYLSVLTRGISLTVDTFDSLLKCFCN 420
           GITPNRVTWSLHVRTHNRVI GLCT+NDS+RAFQLYLSV TRGIS+TVDTFD LLKCFC 
Sbjct: 361 GITPNRVTWSLHVRTHNRVIDGLCTINDSSRAFQLYLSVQTRGISITVDTFDGLLKCFCK 420

Query: 421 KRDLLKISRILDEMVINGCIPEREMWSTVVNFFCDQRKACDAMKLLQLELMN 473
           KRDL K  RILDEMVINGCIP+RE+WSTVVN FCDQRK CDA+KLLQLELM+
Sbjct: 421 KRDLQKTYRILDEMVINGCIPQRELWSTVVNCFCDQRKTCDALKLLQLELMS 472

BLAST of CmoCh13G006460 vs. ExPASy TrEMBL
Match: A0A5D3DS89 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G001080 PE=4 SV=1)

HSP 1 Score: 862.4 bits (2227), Expect = 8.5e-247
Identity = 417/472 (88.35%), Postives = 441/472 (93.43%), Query Frame = 0

Query: 1   MGSKAMFKWAKTVTPAHVEQLVQAERDINKALLIFDSATAEYTNGFKHDLNTFRLMIRKL 60
           MGSKAMFKWAKTVTPAHV+QL+QAERDI KAL+IFDSATAEY NGFKHD+NTF LMI KL
Sbjct: 20  MGSKAMFKWAKTVTPAHVQQLIQAERDIKKALIIFDSATAEYANGFKHDINTFSLMISKL 79

Query: 61  VSANQFRLAETLLDRMKEEKFDVTEDIFLSICRAYGRVHRPLDSIRVFHKMQDFHCKPTE 120
           +SANQFRLAE LLDRMKEEK DVTEDI LSICRAYGR+H+PLDSIRVFHKM DFHCKPTE
Sbjct: 80  ISANQFRLAEALLDRMKEEKIDVTEDILLSICRAYGRIHKPLDSIRVFHKMPDFHCKPTE 139

Query: 121 KSYISVFAILVEENQLKLAFRFYRYMRKVGIPPTVASLNVLIKALCKNSGTMDKAMNMFR 180
           KSYISV AILVEENQLKLAFRFYR MRK+GIPPTV SLNVLIKA CKNSGTMDKAM++FR
Sbjct: 140 KSYISVLAILVEENQLKLAFRFYRDMRKMGIPPTVTSLNVLIKAFCKNSGTMDKAMHLFR 199

Query: 181 EMSNQGCEPDSYTYGTLINGLCRFGNIVEAKELLQEMEKKGCSPSVITYTSMIHGLCQLN 240
            MSN G EPDSYTYGTLINGLCRFGNIVEAKELLQEME KGCSPSVITYTS+IHGLCQLN
Sbjct: 200 TMSNHGFEPDSYTYGTLINGLCRFGNIVEAKELLQEMETKGCSPSVITYTSIIHGLCQLN 259

Query: 241 NVDEAMDLLEDMMSKGIEPNVFTYSSLMDGFCKAGHSLRARDLLELMVQKRLRPNMISYS 300
           NVDEA+ LLEDM  K IEPNVFTYSSLMDGFCKAGHS RARD+L LMVQKRLRPNMISYS
Sbjct: 260 NVDEAVRLLEDMKDKNIEPNVFTYSSLMDGFCKAGHSSRARDILGLMVQKRLRPNMISYS 319

Query: 301 TLINGLCKEGKLNEALEILDRMKLQGLTPDAGLYGKIVNRLCDVCRFQEAANFLDEMVLC 360
           TL+NGLC EGK+NEALEI DRMKLQGL PDAGLYGKIVNRLCDV RFQEAANFLDEMVLC
Sbjct: 320 TLLNGLCNEGKINEALEIFDRMKLQGLKPDAGLYGKIVNRLCDVSRFQEAANFLDEMVLC 379

Query: 361 GITPNRVTWSLHVRTHNRVIHGLCTVNDSNRAFQLYLSVLTRGISLTVDTFDSLLKCFCN 420
           GI PNR+TWSLHVRTHNRVIHGLCT+NDSNRAFQLYLSVLTRGIS+TVDTF+SLLKCFCN
Sbjct: 380 GIKPNRLTWSLHVRTHNRVIHGLCTINDSNRAFQLYLSVLTRGISITVDTFNSLLKCFCN 439

Query: 421 KRDLLKISRILDEMVINGCIPEREMWSTVVNFFCDQRKACDAMKLLQLELMN 473
           KRDL K SRILDEMVINGCIP+ EMWST+VN FCD+RKACDAMKLLQL+LM+
Sbjct: 440 KRDLPKTSRILDEMVINGCIPQGEMWSTMVNCFCDERKACDAMKLLQLQLMD 491

BLAST of CmoCh13G006460 vs. NCBI nr
Match: XP_022927208.1 (pentatricopeptide repeat-containing protein At5g46100 [Cucurbita moschata])

HSP 1 Score: 962.2 bits (2486), Expect = 1.6e-276
Identity = 472/472 (100.00%), Postives = 472/472 (100.00%), Query Frame = 0

Query: 1   MGSKAMFKWAKTVTPAHVEQLVQAERDINKALLIFDSATAEYTNGFKHDLNTFRLMIRKL 60
           MGSKAMFKWAKTVTPAHVEQLVQAERDINKALLIFDSATAEYTNGFKHDLNTFRLMIRKL
Sbjct: 1   MGSKAMFKWAKTVTPAHVEQLVQAERDINKALLIFDSATAEYTNGFKHDLNTFRLMIRKL 60

Query: 61  VSANQFRLAETLLDRMKEEKFDVTEDIFLSICRAYGRVHRPLDSIRVFHKMQDFHCKPTE 120
           VSANQFRLAETLLDRMKEEKFDVTEDIFLSICRAYGRVHRPLDSIRVFHKMQDFHCKPTE
Sbjct: 61  VSANQFRLAETLLDRMKEEKFDVTEDIFLSICRAYGRVHRPLDSIRVFHKMQDFHCKPTE 120

Query: 121 KSYISVFAILVEENQLKLAFRFYRYMRKVGIPPTVASLNVLIKALCKNSGTMDKAMNMFR 180
           KSYISVFAILVEENQLKLAFRFYRYMRKVGIPPTVASLNVLIKALCKNSGTMDKAMNMFR
Sbjct: 121 KSYISVFAILVEENQLKLAFRFYRYMRKVGIPPTVASLNVLIKALCKNSGTMDKAMNMFR 180

Query: 181 EMSNQGCEPDSYTYGTLINGLCRFGNIVEAKELLQEMEKKGCSPSVITYTSMIHGLCQLN 240
           EMSNQGCEPDSYTYGTLINGLCRFGNIVEAKELLQEMEKKGCSPSVITYTSMIHGLCQLN
Sbjct: 181 EMSNQGCEPDSYTYGTLINGLCRFGNIVEAKELLQEMEKKGCSPSVITYTSMIHGLCQLN 240

Query: 241 NVDEAMDLLEDMMSKGIEPNVFTYSSLMDGFCKAGHSLRARDLLELMVQKRLRPNMISYS 300
           NVDEAMDLLEDMMSKGIEPNVFTYSSLMDGFCKAGHSLRARDLLELMVQKRLRPNMISYS
Sbjct: 241 NVDEAMDLLEDMMSKGIEPNVFTYSSLMDGFCKAGHSLRARDLLELMVQKRLRPNMISYS 300

Query: 301 TLINGLCKEGKLNEALEILDRMKLQGLTPDAGLYGKIVNRLCDVCRFQEAANFLDEMVLC 360
           TLINGLCKEGKLNEALEILDRMKLQGLTPDAGLYGKIVNRLCDVCRFQEAANFLDEMVLC
Sbjct: 301 TLINGLCKEGKLNEALEILDRMKLQGLTPDAGLYGKIVNRLCDVCRFQEAANFLDEMVLC 360

Query: 361 GITPNRVTWSLHVRTHNRVIHGLCTVNDSNRAFQLYLSVLTRGISLTVDTFDSLLKCFCN 420
           GITPNRVTWSLHVRTHNRVIHGLCTVNDSNRAFQLYLSVLTRGISLTVDTFDSLLKCFCN
Sbjct: 361 GITPNRVTWSLHVRTHNRVIHGLCTVNDSNRAFQLYLSVLTRGISLTVDTFDSLLKCFCN 420

Query: 421 KRDLLKISRILDEMVINGCIPEREMWSTVVNFFCDQRKACDAMKLLQLELMN 473
           KRDLLKISRILDEMVINGCIPEREMWSTVVNFFCDQRKACDAMKLLQLELMN
Sbjct: 421 KRDLLKISRILDEMVINGCIPEREMWSTVVNFFCDQRKACDAMKLLQLELMN 472

BLAST of CmoCh13G006460 vs. NCBI nr
Match: KAG7019600.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 959.1 bits (2478), Expect = 1.4e-275
Identity = 471/472 (99.79%), Postives = 471/472 (99.79%), Query Frame = 0

Query: 1   MGSKAMFKWAKTVTPAHVEQLVQAERDINKALLIFDSATAEYTNGFKHDLNTFRLMIRKL 60
           MGSKAMFKWAKTVTPAHVEQLVQAERDINKALLIFDSATAEYTNGFKHDLNTFRLMIRKL
Sbjct: 1   MGSKAMFKWAKTVTPAHVEQLVQAERDINKALLIFDSATAEYTNGFKHDLNTFRLMIRKL 60

Query: 61  VSANQFRLAETLLDRMKEEKFDVTEDIFLSICRAYGRVHRPLDSIRVFHKMQDFHCKPTE 120
           VSANQFRLAETLLDRMKEEKFDVTEDIFLSICRAYGRVHRPLDSIRVFHKMQDFHCKPTE
Sbjct: 61  VSANQFRLAETLLDRMKEEKFDVTEDIFLSICRAYGRVHRPLDSIRVFHKMQDFHCKPTE 120

Query: 121 KSYISVFAILVEENQLKLAFRFYRYMRKVGIPPTVASLNVLIKALCKNSGTMDKAMNMFR 180
           KSYISVFAILVEENQLKLAFRFYRYMRKVGIPPTVASLNVLIKALCKNSGTMDKAMNMFR
Sbjct: 121 KSYISVFAILVEENQLKLAFRFYRYMRKVGIPPTVASLNVLIKALCKNSGTMDKAMNMFR 180

Query: 181 EMSNQGCEPDSYTYGTLINGLCRFGNIVEAKELLQEMEKKGCSPSVITYTSMIHGLCQLN 240
           EMSNQGCEPDSYTYGTLINGLCRFGNIVEAKELLQEMEKKGCSPSVITYTSMIHGLCQLN
Sbjct: 181 EMSNQGCEPDSYTYGTLINGLCRFGNIVEAKELLQEMEKKGCSPSVITYTSMIHGLCQLN 240

Query: 241 NVDEAMDLLEDMMSKGIEPNVFTYSSLMDGFCKAGHSLRARDLLELMVQKRLRPNMISYS 300
           NVDEAMDLLEDMMSKGIEPNVFTYSSLMDGFCKAGHSLRARDLLELMVQKRLRPNMISYS
Sbjct: 241 NVDEAMDLLEDMMSKGIEPNVFTYSSLMDGFCKAGHSLRARDLLELMVQKRLRPNMISYS 300

Query: 301 TLINGLCKEGKLNEALEILDRMKLQGLTPDAGLYGKIVNRLCDVCRFQEAANFLDEMVLC 360
           TLINGLCKEGKLNEALEILDRMKLQGLTPDAGLYGKIVNRLCDVCRFQEAANFLDEMVLC
Sbjct: 301 TLINGLCKEGKLNEALEILDRMKLQGLTPDAGLYGKIVNRLCDVCRFQEAANFLDEMVLC 360

Query: 361 GITPNRVTWSLHVRTHNRVIHGLCTVNDSNRAFQLYLSVLTRGISLTVDTFDSLLKCFCN 420
           GITPNRVTWSLHVRTHNRVIHGLCTVNDSNRAFQLYLSVLTRGISLTVDTFDSLLKCFCN
Sbjct: 361 GITPNRVTWSLHVRTHNRVIHGLCTVNDSNRAFQLYLSVLTRGISLTVDTFDSLLKCFCN 420

Query: 421 KRDLLKISRILDEMVINGCIPEREMWSTVVNFFCDQRKACDAMKLLQLELMN 473
           KRDLLKISRILDEMVINGCIPEREMWSTVVN FCDQRKACDAMKLLQLELMN
Sbjct: 421 KRDLLKISRILDEMVINGCIPEREMWSTVVNCFCDQRKACDAMKLLQLELMN 472

BLAST of CmoCh13G006460 vs. NCBI nr
Match: XP_023001715.1 (pentatricopeptide repeat-containing protein At5g46100 [Cucurbita maxima])

HSP 1 Score: 954.1 bits (2465), Expect = 4.4e-274
Identity = 465/472 (98.52%), Postives = 470/472 (99.58%), Query Frame = 0

Query: 1   MGSKAMFKWAKTVTPAHVEQLVQAERDINKALLIFDSATAEYTNGFKHDLNTFRLMIRKL 60
           MGSKAMFKWAKTVTPAHVEQL+QAERDINKALLIFDSATAEYTNGFKHDLNTFRLMIRKL
Sbjct: 1   MGSKAMFKWAKTVTPAHVEQLIQAERDINKALLIFDSATAEYTNGFKHDLNTFRLMIRKL 60

Query: 61  VSANQFRLAETLLDRMKEEKFDVTEDIFLSICRAYGRVHRPLDSIRVFHKMQDFHCKPTE 120
           VSANQFRLAETLLDRMKEEK DVTEDIFLSICRAYGR+HRPLDSIRVFHKMQDFHCKPTE
Sbjct: 61  VSANQFRLAETLLDRMKEEKLDVTEDIFLSICRAYGRIHRPLDSIRVFHKMQDFHCKPTE 120

Query: 121 KSYISVFAILVEENQLKLAFRFYRYMRKVGIPPTVASLNVLIKALCKNSGTMDKAMNMFR 180
           KSYISVFAILVEENQLKLAFRFYRYMRKVGIPPTVASLNVLIKALCKNSGTMDKAMNMFR
Sbjct: 121 KSYISVFAILVEENQLKLAFRFYRYMRKVGIPPTVASLNVLIKALCKNSGTMDKAMNMFR 180

Query: 181 EMSNQGCEPDSYTYGTLINGLCRFGNIVEAKELLQEMEKKGCSPSVITYTSMIHGLCQLN 240
           EMSNQGCEPDSYTYGTLINGLCRFGNIVEAKELLQEMEKKGCSPSV+TYTSMIHGLCQLN
Sbjct: 181 EMSNQGCEPDSYTYGTLINGLCRFGNIVEAKELLQEMEKKGCSPSVVTYTSMIHGLCQLN 240

Query: 241 NVDEAMDLLEDMMSKGIEPNVFTYSSLMDGFCKAGHSLRARDLLELMVQKRLRPNMISYS 300
           NVDEAMDLLEDMMSKGIEPNVFTYSSLMDGFCKAGHSLRARDLLELMVQKRLRPNMISYS
Sbjct: 241 NVDEAMDLLEDMMSKGIEPNVFTYSSLMDGFCKAGHSLRARDLLELMVQKRLRPNMISYS 300

Query: 301 TLINGLCKEGKLNEALEILDRMKLQGLTPDAGLYGKIVNRLCDVCRFQEAANFLDEMVLC 360
           TLINGLCKEGK+NEALEILDRMKLQGLTPDAGLYGKIVNRLCDVCRFQEAANFLDEMVLC
Sbjct: 301 TLINGLCKEGKVNEALEILDRMKLQGLTPDAGLYGKIVNRLCDVCRFQEAANFLDEMVLC 360

Query: 361 GITPNRVTWSLHVRTHNRVIHGLCTVNDSNRAFQLYLSVLTRGISLTVDTFDSLLKCFCN 420
           GITPNRVTWSLHVRTHNRVIHGLCTVNDSNRAFQLYLSVLTRGISLTVDTFDSLLKCFCN
Sbjct: 361 GITPNRVTWSLHVRTHNRVIHGLCTVNDSNRAFQLYLSVLTRGISLTVDTFDSLLKCFCN 420

Query: 421 KRDLLKISRILDEMVINGCIPEREMWSTVVNFFCDQRKACDAMKLLQLELMN 473
           KRDLLK+SRILDEMVINGCIPEREMWSTVVN FCDQRKACDAMKLLQLELMN
Sbjct: 421 KRDLLKVSRILDEMVINGCIPEREMWSTVVNCFCDQRKACDAMKLLQLELMN 472

BLAST of CmoCh13G006460 vs. NCBI nr
Match: XP_023519166.1 (pentatricopeptide repeat-containing protein At5g46100 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 953.4 bits (2463), Expect = 7.5e-274
Identity = 467/472 (98.94%), Postives = 469/472 (99.36%), Query Frame = 0

Query: 1   MGSKAMFKWAKTVTPAHVEQLVQAERDINKALLIFDSATAEYTNGFKHDLNTFRLMIRKL 60
           MGSKAMFKWAKTVTPAHVEQL+QAERDINKALLIFDSATAEYTNGFKHDLNTFRLMIRKL
Sbjct: 1   MGSKAMFKWAKTVTPAHVEQLIQAERDINKALLIFDSATAEYTNGFKHDLNTFRLMIRKL 60

Query: 61  VSANQFRLAETLLDRMKEEKFDVTEDIFLSICRAYGRVHRPLDSIRVFHKMQDFHCKPTE 120
           VSANQFRLAETLLDRMKEEKFDVTEDIFLSICRAYGR+HRPLDSIRVFHKMQDFHCKPTE
Sbjct: 61  VSANQFRLAETLLDRMKEEKFDVTEDIFLSICRAYGRIHRPLDSIRVFHKMQDFHCKPTE 120

Query: 121 KSYISVFAILVEENQLKLAFRFYRYMRKVGIPPTVASLNVLIKALCKNSGTMDKAMNMFR 180
           KSYISVFAILVEENQL LAFRFYRYMRKVGIPPTVASLNVLIKALCKNSGTMDKAMNMFR
Sbjct: 121 KSYISVFAILVEENQLNLAFRFYRYMRKVGIPPTVASLNVLIKALCKNSGTMDKAMNMFR 180

Query: 181 EMSNQGCEPDSYTYGTLINGLCRFGNIVEAKELLQEMEKKGCSPSVITYTSMIHGLCQLN 240
           EMSNQGCEPDSYTYGTLINGLCRFGNIVEAKELLQEMEKKGCSPSVITYTSMIHGLCQLN
Sbjct: 181 EMSNQGCEPDSYTYGTLINGLCRFGNIVEAKELLQEMEKKGCSPSVITYTSMIHGLCQLN 240

Query: 241 NVDEAMDLLEDMMSKGIEPNVFTYSSLMDGFCKAGHSLRARDLLELMVQKRLRPNMISYS 300
           NVDEAMDLLEDMMSKGIEPNVFTYSSLMDGFCKAGHSLRARDLLELMVQKRLRPNMISYS
Sbjct: 241 NVDEAMDLLEDMMSKGIEPNVFTYSSLMDGFCKAGHSLRARDLLELMVQKRLRPNMISYS 300

Query: 301 TLINGLCKEGKLNEALEILDRMKLQGLTPDAGLYGKIVNRLCDVCRFQEAANFLDEMVLC 360
           TLINGLCKEGKLNEALEILDRMKLQGLTPDAGLYGKIVN LCDVCRFQEAANFLDEMVLC
Sbjct: 301 TLINGLCKEGKLNEALEILDRMKLQGLTPDAGLYGKIVNCLCDVCRFQEAANFLDEMVLC 360

Query: 361 GITPNRVTWSLHVRTHNRVIHGLCTVNDSNRAFQLYLSVLTRGISLTVDTFDSLLKCFCN 420
           GITPNRVTWSLHVRTHNRVIHGLCTVNDSNRAFQLYLSVLTRGISLTVDTFDSLLKCFCN
Sbjct: 361 GITPNRVTWSLHVRTHNRVIHGLCTVNDSNRAFQLYLSVLTRGISLTVDTFDSLLKCFCN 420

Query: 421 KRDLLKISRILDEMVINGCIPEREMWSTVVNFFCDQRKACDAMKLLQLELMN 473
           KRDLLKISRILDEMVINGCIPEREMWSTVVN FCDQRKACDAMKLLQLELMN
Sbjct: 421 KRDLLKISRILDEMVINGCIPEREMWSTVVNCFCDQRKACDAMKLLQLELMN 472

BLAST of CmoCh13G006460 vs. NCBI nr
Match: KAG6583976.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 945.7 bits (2443), Expect = 1.6e-271
Identity = 462/467 (98.93%), Postives = 465/467 (99.57%), Query Frame = 0

Query: 6   MFKWAKTVTPAHVEQLVQAERDINKALLIFDSATAEYTNGFKHDLNTFRLMIRKLVSANQ 65
           MFKWAKTVTPAHVEQL+QAERDINKALLIFDSATAEYTNGFKHDLNTFRLMIRKLVSANQ
Sbjct: 1   MFKWAKTVTPAHVEQLIQAERDINKALLIFDSATAEYTNGFKHDLNTFRLMIRKLVSANQ 60

Query: 66  FRLAETLLDRMKEEKFDVTEDIFLSICRAYGRVHRPLDSIRVFHKMQDFHCKPTEKSYIS 125
           FRLAETLLDRMKEEKFDVTEDIFLSICRAYGR+HRPLDSIRVFHKMQDFHCKPTEKSYIS
Sbjct: 61  FRLAETLLDRMKEEKFDVTEDIFLSICRAYGRIHRPLDSIRVFHKMQDFHCKPTEKSYIS 120

Query: 126 VFAILVEENQLKLAFRFYRYMRKVGIPPTVASLNVLIKALCKNSGTMDKAMNMFREMSNQ 185
           VFAILVEENQLKLAFRFYRYMRKVGIPPTVASLNVLIKALCKNSGTMDKAMNMFREMSNQ
Sbjct: 121 VFAILVEENQLKLAFRFYRYMRKVGIPPTVASLNVLIKALCKNSGTMDKAMNMFREMSNQ 180

Query: 186 GCEPDSYTYGTLINGLCRFGNIVEAKELLQEMEKKGCSPSVITYTSMIHGLCQLNNVDEA 245
           GCEPDSYTYGTLINGLCRFGNIVEAKELLQEMEKKGCSPSVITYTSMIHGLCQLNNVDEA
Sbjct: 181 GCEPDSYTYGTLINGLCRFGNIVEAKELLQEMEKKGCSPSVITYTSMIHGLCQLNNVDEA 240

Query: 246 MDLLEDMMSKGIEPNVFTYSSLMDGFCKAGHSLRARDLLELMVQKRLRPNMISYSTLING 305
           MDLLEDMMSKGIEPNVFTYSSLMDGFCKAGHSLRARDLLELMVQKRLRPNMISYSTLING
Sbjct: 241 MDLLEDMMSKGIEPNVFTYSSLMDGFCKAGHSLRARDLLELMVQKRLRPNMISYSTLING 300

Query: 306 LCKEGKLNEALEILDRMKLQGLTPDAGLYGKIVNRLCDVCRFQEAANFLDEMVLCGITPN 365
           LCKEGKLNEALEILDRMKLQGLTPDAGLYGKIVNRLCDVCRFQEAANFLDEMVLCGITPN
Sbjct: 301 LCKEGKLNEALEILDRMKLQGLTPDAGLYGKIVNRLCDVCRFQEAANFLDEMVLCGITPN 360

Query: 366 RVTWSLHVRTHNRVIHGLCTVNDSNRAFQLYLSVLTRGISLTVDTFDSLLKCFCNKRDLL 425
           RVTWSLHVRTHNRVIHGLCTVNDSNRAFQLYLSVLTRGISLTVDTFDSLLKCFCNKRDLL
Sbjct: 361 RVTWSLHVRTHNRVIHGLCTVNDSNRAFQLYLSVLTRGISLTVDTFDSLLKCFCNKRDLL 420

Query: 426 KISRILDEMVINGCIPEREMWSTVVNFFCDQRKACDAMKLLQLELMN 473
           KISRILDEMVINGCIPEREMWSTVVN FCD+RKACDAMKLLQLE MN
Sbjct: 421 KISRILDEMVINGCIPEREMWSTVVNCFCDKRKACDAMKLLQLEFMN 467

BLAST of CmoCh13G006460 vs. TAIR 10
Match: AT5G46100.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 599.4 bits (1544), Expect = 2.6e-171
Identity = 280/471 (59.45%), Postives = 369/471 (78.34%), Query Frame = 0

Query: 1   MGSKA-MFKWAKTVTPAHVEQLVQAERDINKALLIFDSATAEYTNGFKHDLNTFRLMIRK 60
           MGSK  MFKW+K +TP+ V +L++AE+D+ K++ +FDSATAEY NG+ HD ++F  M+ +
Sbjct: 1   MGSKVMMFKWSKNITPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLR 60

Query: 61  LVSANQFRLAETLLDRMKEEKFDVTEDIFLSICRAYGRVHRPLDSIRVFHKMQDFHCKPT 120
           LVSAN+F+ AE L+ RMK E   V+EDI LSICR YGRVHRP DS+RVFHKM+DF C P+
Sbjct: 61  LVSANKFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPS 120

Query: 121 EKSYISVFAILVEENQLKLAFRFYRYMRKVGIPPTVASLNVLIKALCKNSGTMDKAMNMF 180
           +K+Y++V AILVEENQL LAF+FY+ MR++G+PPTVASLNVLIKALC+N GT+D  + +F
Sbjct: 121 QKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIF 180

Query: 181 REMSNQGCEPDSYTYGTLINGLCRFGNIVEAKELLQEMEKKGCSPSVITYTSMIHGLCQL 240
            EM  +GC+PDSYTYGTLI+GLCRFG I EAK+L  EM +K C+P+V+TYTS+I+GLC  
Sbjct: 181 LEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGS 240

Query: 241 NNVDEAMDLLEDMMSKGIEPNVFTYSSLMDGFCKAGHSLRARDLLELMVQKRLRPNMISY 300
            NVDEAM  LE+M SKGIEPNVFTYSSLMDG CK G SL+A +L E+M+ +  RPNM++Y
Sbjct: 241 KNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTY 300

Query: 301 STLINGLCKEGKLNEALEILDRMKLQGLTPDAGLYGKIVNRLCDVCRFQEAANFLDEMVL 360
           +TLI GLCKE K+ EA+E+LDRM LQGL PDAGLYGK+++  C + +F+EAANFLDEM+L
Sbjct: 301 TTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMIL 360

Query: 361 CGITPNRVTWSLHVRTHNRVIHGLCTVNDSNRAFQLYLSVLTRGISLTVDTFDSLLKCFC 420
            GITPNR+TW++HV+T N V+ GLC  N  +RAF LYLS+ +RGIS+ V+T +SL+KC C
Sbjct: 361 GGITPNRLTWNIHVKTSNEVVRGLC-ANYPSRAFTLYLSMRSRGISVEVETLESLVKCLC 420

Query: 421 NKRDLLKISRILDEMVINGCIPEREMWSTVVNFFCDQRKACDAMKLLQLEL 471
            K +  K  +++DE+V +GCIP +  W  ++    D+    +A   L  +L
Sbjct: 421 KKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIGHTLDKTIVGEASDTLLRDL 470

BLAST of CmoCh13G006460 vs. TAIR 10
Match: AT1G74580.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 242.7 bits (618), Expect = 6.1e-64
Identity = 139/455 (30.55%), Postives = 240/455 (52.75%), Query Frame = 0

Query: 15  PAHVEQLVQAERDINKALLIFDSATAEYTNGFKHDLNTFRLMIRKLVSANQFRLAETLLD 74
           P HV  +++ ++D  KAL +F+S   E   GFKH L+T+R +I KL    +F   E +L 
Sbjct: 7   PKHVTAVIKCQKDPMKALEMFNSMRKEV--GFKHTLSTYRSVIEKLGYYGKFEAMEEVLV 66

Query: 75  RMKEEKFD-VTEDIFLSICRAYGRVHRPLDSIRVFHKMQDFHCKPTEKSYISVFAILVEE 134
            M+E   + + E +++   + YGR  +  +++ VF +M  + C+PT  SY ++ ++LV+ 
Sbjct: 67  DMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDS 126

Query: 135 NQLKLAFRFYRYMRKVGIPPTVASLNVLIKALCKNSGTMDKAMNMFREMSNQGCEPDSYT 194
                A + Y  MR  GI P V S  + +K+ CK S     A+ +   MS+QGCE +   
Sbjct: 127 GYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTS-RPHAALRLLNNMSSQGCEMNVVA 186

Query: 195 YGTLINGLCRFGNIVEAKELLQEMEKKGCSPSVITYTSMIHGLCQLNNVDEAMDLLEDMM 254
           Y T++ G        E  EL  +M   G S  + T+  ++  LC+  +V E   LL+ ++
Sbjct: 187 YCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVI 246

Query: 255 SKGIEPNVFTYSSLMDGFCKAGHSLRARDLLELMVQKRLRPNMISYSTLINGLCKEGKLN 314
            +G+ PN+FTY+  + G C+ G    A  ++  ++++  +P++I+Y+ LI GLCK  K  
Sbjct: 247 KRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQ 306

Query: 315 EALEILDRMKLQGLTPDAGLYGKIVNRLCDVCRFQEAANFLDEMVLCGITPNRVTWSLHV 374
           EA   L +M  +GL PD+  Y  ++   C     Q A   + + V  G  P++       
Sbjct: 307 EAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQF------ 366

Query: 375 RTHNRVIHGLCTVNDSNRAFQLYLSVLTRGISLTVDTFDSLLKCFCNKRDLLKISRILDE 434
            T+  +I GLC   ++NRA  L+   L +GI   V  +++L+K   N+  +L+ +++ +E
Sbjct: 367 -TYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANE 426

Query: 435 MVINGCIPEREMWSTVVNFFCDQRKACDAMKLLQL 469
           M   G IPE + ++ +VN  C      DA  L+++
Sbjct: 427 MSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKV 451

BLAST of CmoCh13G006460 vs. TAIR 10
Match: AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 236.5 bits (602), Expect = 4.4e-62
Identity = 128/428 (29.91%), Postives = 228/428 (53.27%), Query Frame = 0

Query: 45  GFKHDLNTFRLMIRKLVSANQFRLAETLLDRMKEEKFDVTEDI--FLSICRAYGRVHRPL 104
           G K D + +  M+  LV  N  +L E  +   K   + +  D+  F  + +A  R H+  
Sbjct: 149 GLKPDTHFYNRMLNLLVDGNSLKLVE--ISHAKMSVWGIKPDVSTFNVLIKALCRAHQLR 208

Query: 105 DSIRVFHKMQDFHCKPTEKSYISVFAILVEENQLKLAFRFYRYMRKVGIPPTVASLNVLI 164
            +I +   M  +   P EK++ +V    +EE  L  A R    M + G   +  S+NV++
Sbjct: 209 PAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIV 268

Query: 165 KALCKNSGTMDKAMNMFREMSNQ-GCEPDSYTYGTLINGLCRFGNIVEAKELLQEMEKKG 224
              CK  G ++ A+N  +EMSNQ G  PD YT+ TL+NGLC+ G++  A E++  M ++G
Sbjct: 269 HGFCK-EGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEG 328

Query: 225 CSPSVITYTSMIHGLCQLNNVDEAMDLLEDMMSKGIEPNVFTYSSLMDGFCKAGHSLRAR 284
             P V TY S+I GLC+L  V EA+++L+ M+++   PN  TY++L+   CK      A 
Sbjct: 329 YDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEAT 388

Query: 285 DLLELMVQKRLRPNMISYSTLINGLCKEGKLNEALEILDRMKLQGLTPDAGLYGKIVNRL 344
           +L  ++  K + P++ ++++LI GLC       A+E+ + M+ +G  PD   Y  +++ L
Sbjct: 389 ELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSL 448

Query: 345 CDVCRFQEAANFLDEMVLCGITPNRVTWSLHVRTHNRVIHGLCTVNDSNRAFQLYLSVLT 404
           C   +  EA N L +M L G   +       V T+N +I G C  N +  A +++  +  
Sbjct: 449 CSKGKLDEALNMLKQMELSGCARS-------VITYNTLIDGFCKANKTREAEEIFDEMEV 508

Query: 405 RGISLTVDTFDSLLKCFCNKRDLLKISRILDEMVINGCIPEREMWSTVVNFFC---DQRK 464
            G+S    T+++L+   C  R +   ++++D+M++ G  P++  +++++  FC   D +K
Sbjct: 509 HGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKK 566

Query: 465 ACDAMKLL 467
           A D ++ +
Sbjct: 569 AADIVQAM 566

BLAST of CmoCh13G006460 vs. TAIR 10
Match: AT4G20090.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 235.7 bits (600), Expect = 7.5e-62
Identity = 139/430 (32.33%), Postives = 223/430 (51.86%), Query Frame = 0

Query: 39  TAEYTNGFKHDLNTFRLMIRKLVSANQFRLAETLLDRMKEEKFDVTEDIFLSICRAYGRV 98
           +A     FK   +T   MI    ++  F   E LL R++ E   + E  F+ + RAYG+ 
Sbjct: 66  SAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKA 125

Query: 99  HRPLDSIRVFHKMQD-FHCKPTEKSYISVFAILVEENQLKLAFRFYRYM----RKVGIPP 158
           H P  ++ +FH+M D F CK + KS+ SV  +++ E        FY Y+      + I P
Sbjct: 126 HLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISP 185

Query: 159 TVASLNVLIKALCKNSGTMDKAMNMFREMSNQGCEPDSYTYGTLINGLCRFGNIVEAKEL 218
              S N++IKALCK    +D+A+ +FR M  + C PD YTY TL++GLC+   I EA  L
Sbjct: 186 NGLSFNLVIKALCK-LRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLL 245

Query: 219 LQEMEKKGCSPSVITYTSMIHGLCQLNNVDEAMDLLEDMMSKGIEPNVFTYSSLMDGFCK 278
           L EM+ +GCSPS + Y  +I GLC+  ++     L+++M  KG  PN  TY++L+ G C 
Sbjct: 246 LDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCL 305

Query: 279 AGHSLRARDLLELMVQKRLRPNMISYSTLINGLCKEGKLNEALEILDRMKLQGLTPDAGL 338
            G   +A  LLE MV  +  PN ++Y TLINGL K+ +  +A+ +L  M+ +G   +  +
Sbjct: 306 KGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHI 365

Query: 339 YGKIVNRLCDVCRFQEAANFLDEMVLCGITPNRVTWSLHVRTHNRVIHGLCTVNDSNRAF 398
           Y  +++ L    + +EA +   +M   G  PN V +S+       ++ GLC     N A 
Sbjct: 366 YSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSV-------LVDGLCREGKPNEAK 425

Query: 399 QLYLSVLTRGISLTVDTFDSLLKCFCNKRDLLKISRILDEMVINGCIPEREMWSTVVNFF 458
           ++   ++  G      T+ SL+K F       +  ++  EM   GC   +  +S +++  
Sbjct: 426 EILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGL 485

Query: 459 CDQRKACDAM 464
           C   +  +AM
Sbjct: 486 CGVGRVKEAM 487

BLAST of CmoCh13G006460 vs. TAIR 10
Match: AT3G48810.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 233.0 bits (593), Expect = 4.8e-61
Identity = 156/559 (27.91%), Postives = 263/559 (47.05%), Query Frame = 0

Query: 12  TVTPAHVE-------QLVQAERDINKALLIFDSATAEYTNGFKHDLNTFRLMIRKLVSAN 71
           T +P H E       + ++ E  +  AL  F S     +N FKH   TF +MIRKL    
Sbjct: 33  TESPNHAEIKELDVVKRLRQESCVPLALHFFKSIA--NSNLFKHTPLTFEVMIRKLAMDG 92

Query: 72  QFRLAETLLDRMKEEKFDVTEDIFLSICRAYGRVHRPLDSIRVFHKMQDFHCKPTEKSYI 131
           Q    + LL +MK + F  +ED+F+S+   Y +V     ++ +F+++++F C P+ K Y 
Sbjct: 93  QVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYN 152

Query: 132 SVFAILVEENQLKLAFRFYRYMRKVGIPPTVASLNVLIKALCKNSGTMDKAMNMFREMSN 191
            V   L+ EN++++ +  YR M++ G  P V + NVL+KALCKN+  +D A  +  EMSN
Sbjct: 153 HVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNN-KVDGAKKLLVEMSN 212

Query: 192 QGCEPD--SYT----------------------------YGTLINGLCRFGNIVEAKELL 251
           +GC PD  SYT                            Y  LINGLC+  +   A EL+
Sbjct: 213 KGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELM 272

Query: 252 QEMEKKGCSPSVITYTSMIHGLCQLNNVDEAMDLLEDMMSKGIEPNVFT----------- 311
           +EM +KG SP+VI+Y+++I+ LC    ++ A   L  M+ +G  PN++T           
Sbjct: 273 REMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLR 332

Query: 312 -------------------------YSSLMDGFCKAGHSLRARDLLELMVQKRLRPNMIS 371
                                    Y++L+ GFC  G+ ++A  +   M +    PN+ +
Sbjct: 333 GTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRT 392

Query: 372 YSTLINGLCKEGKLNEALEILDRMKLQGLTPDAGLYGKIVNRLCDVCRFQEAANFLDEMV 431
           Y +LING  K G L+ A+ I ++M   G  P+  +Y  +V  LC   +F+EA + ++ M 
Sbjct: 393 YGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMS 452

Query: 432 LCGITPNRVTWSLHVR-----------------------------THNRVIHGLCTVNDS 469
                P+  T++  ++                             T+N ++ GL   N  
Sbjct: 453 KENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRI 512

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9FNL23.6e-17059.45Pentatricopeptide repeat-containing protein At5g46100 OS=Arabidopsis thaliana OX... [more]
Q9CA588.6e-6330.55Putative pentatricopeptide repeat-containing protein At1g74580 OS=Arabidopsis th... [more]
Q9LFF16.2e-6129.91Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop... [more]
O494361.1e-6032.33Pentatricopeptide repeat-containing protein At4g20090 OS=Arabidopsis thaliana OX... [more]
Q9M3026.8e-6027.91Pentatricopeptide repeat-containing protein At3g48810 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
A0A6J1EKD37.9e-277100.00pentatricopeptide repeat-containing protein At5g46100 OS=Cucurbita moschata OX=3... [more]
A0A6J1KLZ32.1e-27498.52pentatricopeptide repeat-containing protein At5g46100 OS=Cucurbita maxima OX=366... [more]
A0A6J1CDW14.5e-24888.98pentatricopeptide repeat-containing protein At5g46100 isoform X1 OS=Momordica ch... [more]
A0A6J1CF144.5e-24888.98pentatricopeptide repeat-containing protein At5g46100 isoform X2 OS=Momordica ch... [more]
A0A5D3DS898.5e-24788.35Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
Match NameE-valueIdentityDescription
XP_022927208.11.6e-276100.00pentatricopeptide repeat-containing protein At5g46100 [Cucurbita moschata][more]
KAG7019600.11.4e-27599.79Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
XP_023001715.14.4e-27498.52pentatricopeptide repeat-containing protein At5g46100 [Cucurbita maxima][more]
XP_023519166.17.5e-27498.94pentatricopeptide repeat-containing protein At5g46100 [Cucurbita pepo subsp. pep... [more]
KAG6583976.11.6e-27198.93Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
Match NameE-valueIdentityDescription
AT5G46100.12.6e-17159.45Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G74580.16.1e-6430.55Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G53700.14.4e-6229.91Pentatricopeptide repeat (PPR) superfamily protein [more]
AT4G20090.17.5e-6232.33Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G48810.14.8e-6127.91Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 4..136
e-value: 3.5E-16
score: 61.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 288..360
e-value: 4.2E-17
score: 64.3
coord: 143..218
e-value: 8.1E-25
score: 89.4
coord: 219..287
e-value: 9.0E-25
score: 89.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 370..471
e-value: 8.7E-15
score: 56.9
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 401..453
e-value: 5.1E-4
score: 20.1
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 153..203
e-value: 1.8E-16
score: 60.0
coord: 225..273
e-value: 1.1E-18
score: 67.1
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 297..331
e-value: 1.5E-10
score: 38.6
coord: 227..261
e-value: 3.4E-12
score: 43.8
coord: 52..83
e-value: 0.0012
score: 16.8
coord: 192..226
e-value: 6.9E-11
score: 39.6
coord: 334..365
e-value: 0.0017
score: 16.4
coord: 262..295
e-value: 2.8E-7
score: 28.3
coord: 157..191
e-value: 1.8E-6
score: 25.7
coord: 410..441
e-value: 2.8E-4
score: 18.9
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 291..323
e-value: 1.9E-13
score: 49.8
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 52..80
e-value: 0.09
score: 13.1
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 260..294
score: 12.013642
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 330..364
score: 9.119859
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 154..189
score: 12.232868
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 407..441
score: 9.766576
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 225..259
score: 13.833219
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 190..224
score: 14.162057
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 49..83
score: 8.527949
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 295..329
score: 13.690722
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 119..153
score: 8.725252
NoneNo IPR availablePANTHERPTHR47933:SF25EMP16coord: 3..471
NoneNo IPR availablePANTHERPTHR47933PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1, MITOCHONDRIALcoord: 3..471
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 130..258

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh13G006460.1CmoCh13G006460.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding