CmoCh13G005110 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh13G005110
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
LocationCmo_Chr13: 6018469 .. 6020254 (+)
RNA-Seq ExpressionCmoCh13G005110
SyntenyCmoCh13G005110
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCCTAGCTAGTGAAAACCACCGCGACGGTGGCCACCGCGGAAGGAATGTGAGGGAGTCTACTCCGTTTCTTTTTTTTTTTTTTTTTTTTGGAATGAGTAGCGGTGTGTGATGGGACGGCCCAAAAAGGAGCAGAAAAGTTACCTTAATAGGGGAAGAGATCTGGACCGTCCGTTGGAACAAGAATCCGACGAAAACGGCCAGCTGATTTGCGTCGTGGAATCTGAGGATGCCAGTCTGTTATCATTAGCACACACCTCTAGGACTTAACACCCATCCTCAAATATCCTTCTGCTCTGCAAATGGTACCAATTTAGCTCTGTAAACGTCGCCGTTCGTATCCCGGTGACCGGAAACTGTTGACCTCATTGGAGAGATATCTTTAGGTACGAAATTACCTTCCAAATCGATGGTTTGAACCAAATTAGGCACTTCTTCAACAGACCTATCCACACGCCGTTGCAGAAAGAAACCTCCCTACCTTTTGATTCTGCGTTGGATAAATTAGGAGAAGCCAGCTCGACGGAACGACGACGAGCAGCAACAGGAAGCCATCAAATTCGGCGATGTCTTCAGCGACCTGGCTGCGAACCCCGACGTACCTCGAGATTCGTATGATGACAGTGCGAACCCCGACGCACCGGAAGCCTCCGCCTGTGGAATTTCCGGTAAAATCGTGTCTGATGGCGTCGTGTCTGCCAGGTCAACGATTTCCGGTTGCTGGAGTAAAAATCAGGAACACAAACGGCAAGGTAACGATATTTTTAACGGAGTGATTAAATTGTTACGATTTCTAAAGTTGTTTTTTGAAAGTTTACACCGTAAGATGACGGTTATCAATATATAAAATAATGAATTTAAGTTTTTTTTGTACTTTAAAATATTTACGTGTTTGAAATTTAATATTGAAATTTCGCAGTCCTCTCTTTTTAAAAAAATAATTTTTATTCTCCTTTTAATTCTAAAAATGAAAAAGCTTTTATCTCATGTTTCCATTAAAAAAGCTCTTTTTTTCCAAAAAAATATGTTGAATATTATTATATTCATTAAACTTTTAAAAAAATTCAATAATAACATTTAAAAAATCTAAAAAAATACCTTTTTAAACAATGTTAATTAACTTTATTTAGTATTTCATTAAACTTTTAAAACTTTAAAAAATATATATATATTATTTAGTTTCCAAAAATTACTTTAATACTCGTACTGTTAAACTATTTTTTACCCTTAAAATTTCATAAACATTTTTTTAAAATGGTATTAATGGTAAATATATTTTTAAACTTAGAAAGTTATTAATGAAATACTATTAAAAATTTAATGATTACTATTTTTAAACAAAAATATTAACTATTTTCATTAAAAATAAATAAGTAACTGATTAGGTTAAGAATATTATTTTAGTTTGTGGAAGATGGGAGATATTTTTTTACGACACCAACATAAAATCTATGCTCCTAATCTCAACACAAAGTTAAAGACGATGGGTGAAAAGGGTATCATCCAAAGATAGAGCATTTGATCGAGAAGTGAGTACTAAAAACTGTTTGTAATTTTGGAGATTTTGGTACAAAAAACCCAGTTGAATTTTTCAAATTCCATGGGGGAATCATTTCCATTTTGAACTAAACTATTTTGGGCTAACAAACACCAACATTTGTGTTTCAGAAGAGATGAAAGATGAGGATGTTGTTTCTTACCACATTTTTCTAGCAATTGATCTTCAATGGCGGATTCAGAGACCTTCTCCATTTGTGTATCAGAAGAGATGAAAGATGAGGATG

mRNA sequence

ATGTTCCTAGCTAGTGAAAACCACCGCGACGGTGGCCACCGCGGAAGGAATGAGAAGCCAGCTCGACGGAACGACGACGAGCAGCAACAGGAAGCCATCAAATTCGGCGATGTCTTCAGCGACCTGGCTGCGAACCCCGACGTACCTCGAGATTCGTATGATGACAGTGCGAACCCCGACGCACCGGAAGCCTCCGCCTGTGGAATTTCCGGTAAAATCGTGTCTGATGGCGTCGTGTCTGCCAGGTCAACGATTTCCGGTTGCTGGAGTAAAAATCAGGAACACAAACGGCAAGAAGAGATGAAAGATGAGGATGTTGTTTCTTACCACATTTTTCTAGCAATTGATCTTCAATGGCGGATTCAGAGACCTTCTCCATTTGTGTATCAGAAGAGATGAAAGATGAGGATG

Coding sequence (CDS)

ATGTTCCTAGCTAGTGAAAACCACCGCGACGGTGGCCACCGCGGAAGGAATGAGAAGCCAGCTCGACGGAACGACGACGAGCAGCAACAGGAAGCCATCAAATTCGGCGATGTCTTCAGCGACCTGGCTGCGAACCCCGACGTACCTCGAGATTCGTATGATGACAGTGCGAACCCCGACGCACCGGAAGCCTCCGCCTGTGGAATTTCCGGTAAAATCGTGTCTGATGGCGTCGTGTCTGCCAGGTCAACGATTTCCGGTTGCTGGAGTAAAAATCAGGAACACAAACGGCAAGAAGAGATGAAAGATGAGGATGTTGTTTCTTACCACATTTTTCTAGCAATTGATCTTCAATGGCGGATTCAGAGACCTTCTCCATTTGTGTATCAGAAGAGATGA

Protein sequence

MFLASENHRDGGHRGRNEKPARRNDDEQQQEAIKFGDVFSDLAANPDVPRDSYDDSANPDAPEASACGISGKIVSDGVVSARSTISGCWSKNQEHKRQEEMKDEDVVSYHIFLAIDLQWRIQRPSPFVYQKR
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 45..68
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 7..29

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh13G005110.1CmoCh13G005110.1mRNA