CmoCh13G004750 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh13G004750
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	ras-related protein RABF2b-like
Location	Cmo_Chr13: 5779205 .. 5783127 (+)
RNA-Seq Expression	CmoCh13G004750
Synteny	CmoCh13G004750

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGAAATGCAAAGGAAATAAATTTAATTTTCAATCGCTGTCGTGCGTAATCGAGTTGTTCTTGTTATTGTTCATCTTGAGGGGGGAAAGGAGAGAGCGTGTTTTGCTTCCAAGAGAGAGATAGGCATCTGTCTTGATTGTTTTGATTTCCTTTTTCGCCATTCTTAACCCTTTTTGTTCTGTCAACGCCTGTTCTTCCACGATTCTCTTCGATTTTTGTCTCGATTGCGGTTTACGGCCATGGCCACCAGCGGAAACAAGAACATTAATGCCAAATTAGTGAGACTTTTCTCCCCTTTTTGATTCTTAAAGTTTGATTTCTTTTTTCTGTCCGGATTTTGATGCCGAATCGCGATGTGGGTCTCTTTGATTTTCCTTTTCCGGAATTGGGTTTTCATTATTGTTCTTCTTTTCATCGTCAATTCGATTTGGTTTAATCCTTGGTAGTCTTGATTTGTGTCTGAATTCTGATTAGGGTTTTGTTTTGTTCGCGAATATCCGAATTTTTTTCTGGTTTGATTGTATTTCTGTTGGTTGTAATTATGAAATCTCTGTTTGCATTCTCTATATATCATTAACTTTTGATGATTGTTGGGATAATCCCTTTCCAATTTATAATTCGGTCGTGATCTAAGTTAATTCTCTGCATTTTAATTAGCAGATAGTTCAGTAGGATCGTGATTATTGCCCTTAGTTTCAGCACTCAATTGTATTAGACGGTATCCCTTTTTGTTTTTCGAGATTTTTTTACATGCTCTTCCCCTCTTTGTCCAATTCTGATATTAAATCATACCTCATATTATGCTTGCCCCTGTTTTTACTATCCAATTGTCTCACTTCAATGGCTATCATACATGGAATGTTATTTGTTGAAAAAGGAAGGGGCTGGATGGACTATGTTTAGCTACAACTATTTTGGAACAACACATATGAAATCCAGTTTATTTCACTTCGTTTTTCGCTCAGGTGCTTCTTGGTGATGTTGGTGCTGGGAAGTCGAGTCTAGTGTTGCGTTTTGTTAAAGGGCAATTTGTTGAGTTTCAGGTTTGTATTATAAACCATTTGGATTTGGCTGTTGAAATTTTTGAAATGTCTTTCTGTCTTGGTCGTATGTAATCTTTTTAATTGTTCAATTATGTAGGAATCAACGATCGGTGCAGCCTTTTTCTCTCAAACATTGGCTGTAAATGATGCCACTGTGAAATTTGAAATCTGGGACACAGCTGGGCAGGAGAGATACCACAGTTTGGCTCCAATGTATTACAGGGGTGCAGCTGCAGCTATTATCGTCTACGATATTACTAACCAAGTAAGTGGCGTTTTGAAAACTCTTGATGGGTTGCATATGGTCTGAGAACAAAATAATTGTAATTGTGCTTGGGCATTACATCTTCAAATTCGTTGTACAAGCCATCAGCCATTTCCGTGAAATATGTTTGGGATGAAAGAAGTGTGTTATTATATGTCTATGAATTAAGTACCAACCATTTTGTCTTTATAATTAATTGCTAAAAGAACTTAGAAGTTGTAACGGCCCAAGTCCACCACTAGCCTATATTGTCCTCTTTGGGCTTTTCCTTTTGAGTTTCTCCTCGAGGTTTTTAAAACGCGTCTGCCAGGGAGAGGTTTCCACACCTTTATAAAGAATGTTTCGTTCTCCTCTCCAACCGATGTGGGATCTCACAATCCACCCCCTTCGGGGCCCAGCGTCCTCGTTGGCACTCGTTCCCTTCTCTAATCGATGTGGGACCTCCAATCCACCCCCTTTGAGGCCCAGCGTCCTTGCTGGCACACCGCCTCTAGTCCACTCCCTCCGGGGCTCAGCCTTTTCGTTGGCACATCGCTCGTTGTCTGGCTCTGATACCATTTGTAACTGGCCAAGCCCACCGCTAGCGGATAGTATTCTCTTTGGGCTTTCCCTTTCGGGCTTCCCCTTAAGATTTTTAAAACGCTAGCAGAGTGGTTTCTACATCCTTATAAAAAATGCTTTGTTCTCCCCACAACCGACTTGAAATTTCACTGAAGTTTTTTTTCATTTTTAATTATTTAAAAAAAAATTGATGGGAGCTAACAAAATCTTTGAAATTCACCTACAGGTATTGACTTTAGATAAGGAAACTTCAACAGAATTGACGTTTTGAACTTTTAACCAAGTGGGGGCTTTTGTGAAGTTATTAAGAGGCTTAGAGATTAATAAATCATTTCATAGTGGTGCTTGATAAAGGAAACTGTGATGGGTTTGTATATGACCTGAAGTGGGATTCTGTGTGTGTGTTTTAGAGCGGGGAGCTAGGAGTAACGCTTTTTTAGGAGTTCTTACCCTTCTGAAAAGCGACATACTCTATACATATCAGGCTTCACTAGGGATTGATTATTCATCCTTTTATATACTACTGTAATCGAATTACAATTTTTATTCCTTTTCATACCTCAACTCTTTTGTGTAACCTCTATTTGATTGTAGGCTTCATTTGATCGGGCAAAAAAATGGGTTCAAGAACTTCAAGCACAAGGTAGTCTTACTTTTAAGTGGCCTAAATTTACATTGGAAGAGCATCTGGATTGAGCATTCTGTGAACTTTTAGCAAGTGAAATTAGTGTGGCAGCTGTCTACCTTATTCTTTTTACCAATTTGATCGTCTCCTTTTATCAGGCAATCCGAATATGGTCATGGCTTTAGCTGGGAATAAATCAGATATGTTGGATTCTAGGAGTGTTGCTGCAGAGGCAAGTACTCCCAACCTCAGTTTTCTTTATTCTGTAGTACTTTGTTGAACTGGGATGCATTTCATACAACTAAAAAAGTATATTTCTCTAGTGACGATCTTCTCTAGTTGGAATTTTGTGATATTTTTGTACTAAGCTGTGACAATTGGTTCAATTGTTGCTCGTGTAATTGTGCATCGTACAGGACGCTCAAACGTATGCGCAGGAGAATGGCCTTTTCTTCATGGAAACCTCTGCAAAAAGTGCTGCTAATGTCAATGATATCTTCTATGAAATAGGTTAGTAACTAGGACCTATGAGTTCAAGGGACCGCCCCCGCCCCCGCCCCCGCCCCCCACCCCCCTACCGAAATAAAAGAGCTGAAACAAGATTTCTCTTTTATGCTTACGATATCTCTGGATCGTAGACTTAAGGAATTTGAGTTTATGGAGCCTGAGTGTTCTAAATTTGTATTTGAGGGGATGGTGCAAAACATGAGTTATAGAAACCGTGGTTCGGTGTCATATTTGTTTGATCAATGGGGATATCCAACACGAGTTTCATGAGTTTGGGTTCATTAAGTCGCGATAGCAAACCCGTAGCTTGGGACAAGTAAATTTATATTAAGTAGATTCATCTTCTTTATCTGGAGGTTCACAAAGTTAGAGAAGTCCCTGCCCTTGACCCCACTCCCAACCACACACACACACAACACACACACAAAAAGGTTCACAAAGTTGATTTTGATTCCTTGTTTTTCGATGCAGCAAAGAGATTACCACGAGTGCAACCGGTACAGAATACACCAGGGATGGTTCTAGACAGACCTGCTGAAAGGGTTGCAAGCACGTCGTGTTGCTCGTAGAACGTCATTGTTCTACTCTTAAGGTGTCTGCAGAATGACCTCCATTTGTATGCAGAATTCTTAAGGAAAAGAAGAGAAAAAAAAAGGGTTGTTGATGTTGAATTTATTATGATGTGTAAATTGACTGCTGTGTTTAGATGATGTGCTTCTTTTGCAGCCACTATAAATGTGGCAGACTCGCTACTTTGTGTTTATATGATGACCTTCGGCTTGCTTCACACATGCACAGTTTTCTTGGCTTCTTTTTTCATTGGGGTAATCGGGATATCTACCAAAAAGTCATTTAAAATTCGTTTATTAAATGCTTGAAAAGCCATTTTTAATAGATTATGAAGCAAGTTTGATTTGACTCG

mRNA sequence

AGGAAATGCAAAGGAAATAAATTTAATTTTCAATCGCTGTCGTGCGTAATCGAGTTGTTCTTGTTATTGTTCATCTTGAGGGGGGAAAGGAGAGAGCGTGTTTTGCTTCCAAGAGAGAGATAGGCATCTGTCTTGATTGTTTTGATTTCCTTTTTCGCCATTCTTAACCCTTTTTGTTCTGTCAACGCCTGTTCTTCCACGATTCTCTTCGATTTTTGTCTCGATTGCGGTTTACGGCCATGGCCACCAGCGGAAACAAGAACATTAATGCCAAATTAGTGCTTCTTGGTGATGTTGGTGCTGGGAAGTCGAGTCTAGTGTTGCGTTTTGTTAAAGGGCAATTTGTTGAGTTTCAGGAATCAACGATCGGTGCAGCCTTTTTCTCTCAAACATTGGCTGTAAATGATGCCACTGTGAAATTTGAAATCTGGGACACAGCTGGGCAGGAGAGATACCACAGTTTGGCTCCAATGTATTACAGGGGTGCAGCTGCAGCTATTATCGTCTACGATATTACTAACCAAGCTTCATTTGATCGGGCAAAAAAATGGGTTCAAGAACTTCAAGCACAAGGCAATCCGAATATGGTCATGGCTTTAGCTGGGAATAAATCAGATATGTTGGATTCTAGGAGTGTTGCTGCAGAGGCAAGTACTCCCAACCTCAGTTTTCTTTATTCTGTAGACGCTCAAACGTATGCGCAGGAGAATGGCCTTTTCTTCATGGAAACCTCTGCAAAAAGTGCTGCTAATGTCAATGATATCTTCTATGAAATAGCAAAGAGATTACCACGAGTGCAACCGGTACAGAATACACCAGGGATGGTTCTAGACAGACCTGCTGAAAGGGTTGCAAGCACGTCGTGTTGCTCGTAGAACGTCATTGTTCTACTCTTAAGGTGTCTGCAGAATGACCTCCATTTGTATGCAGAATTCTTAAGGAAAAGAAGAGAAAAAAAAAGGGTTGTTGATGTTGAATTTATTATGATGTGTAAATTGACTGCTGTGTTTAGATGATGTGCTTCTTTTGCAGCCACTATAAATGTGGCAGACTCGCTACTTTGTGTTTATATGATGACCTTCGGCTTGCTTCACACATGCACAGTTTTCTTGGCTTCTTTTTTCATTGGGGTAATCGGGATATCTACCAAAAAGTCATTTAAAATTCGTTTATTAAATGCTTGAAAAGCCATTTTTAATAGATTATGAAGCAAGTTTGATTTGACTCG

Coding sequence (CDS)

ATGGCCACCAGCGGAAACAAGAACATTAATGCCAAATTAGTGCTTCTTGGTGATGTTGGTGCTGGGAAGTCGAGTCTAGTGTTGCGTTTTGTTAAAGGGCAATTTGTTGAGTTTCAGGAATCAACGATCGGTGCAGCCTTTTTCTCTCAAACATTGGCTGTAAATGATGCCACTGTGAAATTTGAAATCTGGGACACAGCTGGGCAGGAGAGATACCACAGTTTGGCTCCAATGTATTACAGGGGTGCAGCTGCAGCTATTATCGTCTACGATATTACTAACCAAGCTTCATTTGATCGGGCAAAAAAATGGGTTCAAGAACTTCAAGCACAAGGCAATCCGAATATGGTCATGGCTTTAGCTGGGAATAAATCAGATATGTTGGATTCTAGGAGTGTTGCTGCAGAGGCAAGTACTCCCAACCTCAGTTTTCTTTATTCTGTAGACGCTCAAACGTATGCGCAGGAGAATGGCCTTTTCTTCATGGAAACCTCTGCAAAAAGTGCTGCTAATGTCAATGATATCTTCTATGAAATAGCAAAGAGATTACCACGAGTGCAACCGGTACAGAATACACCAGGGATGGTTCTAGACAGACCTGCTGAAAGGGTTGCAAGCACGTCGTGTTGCTCGTAG

Protein sequence

MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFDRAKKWVQELQAQGNPNMVMALAGNKSDMLDSRSVAAEASTPNLSFLYSVDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNTPGMVLDRPAERVASTSCCS

Homology

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BLAST of CmoCh13G004750 vs. ExPASy Swiss-Prot
Match: Q9SN68 (Ras-related protein RABF2b OS=Arabidopsis thaliana OX=3702 GN=RABF2B PE=1 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 6.3e-90
Identity = 172/212 (81.13%), Postives = 186/212 (87.74%), Query Frame = 0


Query: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60
           MA +GNK+INAKLVLLGDVGAGKSSLVLRFVK QFVEFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1   MAAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVK 60

Query: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFDRAKKWVQELQAQGNPNMVMAL 120
           FEIWDTAGQERYHSLAPMYYRGAAAAIIV+D+TNQASF+RAKKWVQELQAQGNPNMVMAL
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMAL 120

Query: 121 AGNKSDMLDSRSVAAEASTPNLSFLYSVDAQTYAQENGLFFMETSAKSAANVNDIFYEIA 180
           AGNKSD+LD+R V AE            DAQTYAQENGLFFMETSAK+A NV +IFYEIA
Sbjct: 121 AGNKSDLLDARKVTAE------------DAQTYAQENGLFFMETSAKTATNVKEIFYEIA 180

Query: 181 KRLPRVQPVQNTPGMVL-DRPAERVASTSCCS 212
           +RLPRVQP +N  GMVL DR  +R  S+SCC+
Sbjct: 181 RRLPRVQPTENPTGMVLPDRAMDRAVSSSCCA 200

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BLAST of CmoCh13G004750 vs. ExPASy Swiss-Prot
Match: P31582 (Ras-related protein RABF2a OS=Arabidopsis thaliana OX=3702 GN=RABF2A PE=1 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 4.5e-88
Identity = 170/212 (80.19%), Postives = 184/212 (86.79%), Query Frame = 0


Query: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60
           MA+SGNKNINAKLVLLGDVGAGKSSLVLRFVK QFVEFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1   MASSGNKNINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVK 60

Query: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFDRAKKWVQELQAQGNPNMVMAL 120
           FEIWDTAGQERYHSLAPMYYRGAAAAIIV+DITNQASF+RAKKWVQELQAQGNPNMVMAL
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDITNQASFERAKKWVQELQAQGNPNMVMAL 120

Query: 121 AGNKSDMLDSRSVAAEASTPNLSFLYSVDAQTYAQENGLFFMETSAKSAANVNDIFYEIA 180
           AGNK+D+LD+R V+AE            +A+ YAQEN LFFMETSAK+A NV DIFYEIA
Sbjct: 121 AGNKADLLDARKVSAE------------EAEIYAQENSLFFMETSAKTATNVKDIFYEIA 180

Query: 181 KRLPRVQPVQNTPGMVL-DRPAERVASTSCCS 212
           KRLPRVQP +N  GMVL + P     S+SCC+
Sbjct: 181 KRLPRVQPAENPTGMVLPNGPGATAVSSSCCA 200

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BLAST of CmoCh13G004750 vs. ExPASy Swiss-Prot
Match: Q0ILQ6 (Ras-related protein Rab5A OS=Oryza sativa subsp. japonica OX=39947 GN=RAB5A PE=1 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 1.7e-82
Identity = 166/213 (77.93%), Postives = 182/213 (85.45%), Query Frame = 0


Query: 2   ATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVKF 61
           A  GNK  NAKLVLLGDVG GKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVND TVKF
Sbjct: 3   ANPGNKIRNAKLVLLGDVGTGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKF 62

Query: 62  EIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFDRAKKWVQELQAQGNPNMVMALA 121
           EIWDTAGQERYHSLAPMYYRGAAAAI+VYDITN ASF RAKKWVQELQAQGNPN +MALA
Sbjct: 63  EIWDTAGQERYHSLAPMYYRGAAAAIVVYDITNAASFTRAKKWVQELQAQGNPNTIMALA 122

Query: 122 GNKSDMLDSRSVAAEASTPNLSFLYSVDAQTYAQENGLFFMETSAKSAANVNDIFYEIAK 181
           GNK+DM+++R V AE            +A+TYAQENGLFFMETSAK+A NVND+F+EIAK
Sbjct: 123 GNKADMVEARQVPAE------------EAKTYAQENGLFFMETSAKTAINVNDVFHEIAK 182

Query: 182 RLPRVQPVQNTP-GMVLD-RPAER-VASTSCCS 212
           RL + Q  Q+TP GMVL+ RPAER V+S+SCCS
Sbjct: 183 RLLQGQQAQDTPAGMVLNQRPAERMVSSSSCCS 203

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BLAST of CmoCh13G004750 vs. ExPASy Swiss-Prot
Match: P31583 (Ras-related protein RHN1 OS=Nicotiana plumbaginifolia OX=4092 GN=RHN1 PE=2 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 1.7e-82
Identity = 161/212 (75.94%), Postives = 177/212 (83.49%), Query Frame = 0


Query: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60
           MA+S + N+NAKLVLLGD+GAGKSSLV+RFVKGQF+EFQESTIGAAFFS TLAVN+ATVK
Sbjct: 1   MASSSHNNLNAKLVLLGDMGAGKSSLVIRFVKGQFLEFQESTIGAAFFSSTLAVNNATVK 60

Query: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFDRAKKWVQELQAQGNPNMVMAL 120
           FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDIT+  SF RAKKWVQELQ QGNPNMVMAL
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSSDSFARAKKWVQELQKQGNPNMVMAL 120

Query: 121 AGNKSDMLDSRSVAAEASTPNLSFLYSVDAQTYAQENGLFFMETSAKSAANVNDIFYEIA 180
           AGNK+D+ D R V AE            +A+ YA+ENGLFFMETSAK+A NVN IFYEIA
Sbjct: 121 AGNKADLEDRRKVTAE------------EARLYAEENGLFFMETSAKTAVNVNAIFYEIA 180

Query: 181 KRLPRVQPVQNTPGMVL-DRPAERVASTSCCS 212
           KRLPR QP QN  GMVL DR AE   +TSCC+
Sbjct: 181 KRLPRAQPAQNPAGMVLVDRAAEGTRATSCCT 200

[Close]

BLAST of CmoCh13G004750 vs. ExPASy Swiss-Prot
Match: P29687 (Ras-related protein Rab5 OS=Nicotiana tabacum OX=4097 GN=RAB5 PE=2 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 9.1e-81
Identity = 156/212 (73.58%), Postives = 176/212 (83.02%), Query Frame = 0


Query: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60
           MA+  + N+NAKLVLLGD+GAGKSSLV+RFVKGQF+EFQESTIGAAFFS T++VN+ATVK
Sbjct: 1   MASRRHNNLNAKLVLLGDMGAGKSSLVIRFVKGQFLEFQESTIGAAFFSSTVSVNNATVK 60

Query: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFDRAKKWVQELQAQGNPNMVMAL 120
           FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDIT+  S  RAKKWVQELQ QGNPNMVMAL
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSTESLARAKKWVQELQKQGNPNMVMAL 120

Query: 121 AGNKSDMLDSRSVAAEASTPNLSFLYSVDAQTYAQENGLFFMETSAKSAANVNDIFYEIA 180
           AGNK+D+ D R V AE            +A+ YA+ENGLFFMETSAK+A NVNDIFYEIA
Sbjct: 121 AGNKADLEDKRKVTAE------------EARLYAEENGLFFMETSAKTATNVNDIFYEIA 180

Query: 181 KRLPRVQPVQNTPGMVL-DRPAERVASTSCCS 212
           KRLPR QP QN  GMVL D+PA+   + SCC+
Sbjct: 181 KRLPRAQPAQNPAGMVLEDKPAQGSQAASCCT 200

[Close]

BLAST of CmoCh13G004750 vs. ExPASy TrEMBL
Match: A0A6J1EHC6 (ras-related protein RABF2b-like OS=Cucurbita moschata OX=3662 GN=LOC111434185 PE=4 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 4.4e-102
Identity = 199/211 (94.31%), Postives = 199/211 (94.31%), Query Frame = 0


Query: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60
           MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60

Query: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFDRAKKWVQELQAQGNPNMVMAL 120
           FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFDRAKKWVQELQAQGNPNMVMAL
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFDRAKKWVQELQAQGNPNMVMAL 120

Query: 121 AGNKSDMLDSRSVAAEASTPNLSFLYSVDAQTYAQENGLFFMETSAKSAANVNDIFYEIA 180
           AGNKSDMLDSRSVAAE            DAQTYAQENGLFFMETSAKSAANVNDIFYEIA
Sbjct: 121 AGNKSDMLDSRSVAAE------------DAQTYAQENGLFFMETSAKSAANVNDIFYEIA 180

Query: 181 KRLPRVQPVQNTPGMVLDRPAERVASTSCCS 212
           KRLPRVQPVQNTPGMVLDRPAERVASTSCCS
Sbjct: 181 KRLPRVQPVQNTPGMVLDRPAERVASTSCCS 199

[Close]

BLAST of CmoCh13G004750 vs. ExPASy TrEMBL
Match: A0A6J1KP17 (ras-related protein RABF2b-like OS=Cucurbita maxima OX=3661 GN=LOC111495218 PE=4 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 1.7e-101
Identity = 198/211 (93.84%), Postives = 198/211 (93.84%), Query Frame = 0


Query: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60
           MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60

Query: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFDRAKKWVQELQAQGNPNMVMAL 120
           FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFDRAKKWVQELQAQGNPNMVMAL
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFDRAKKWVQELQAQGNPNMVMAL 120

Query: 121 AGNKSDMLDSRSVAAEASTPNLSFLYSVDAQTYAQENGLFFMETSAKSAANVNDIFYEIA 180
           AGNKSDMLDSRSVAAE            DAQTYAQENGLFFMETSAKSAANVNDIFYEIA
Sbjct: 121 AGNKSDMLDSRSVAAE------------DAQTYAQENGLFFMETSAKSAANVNDIFYEIA 180

Query: 181 KRLPRVQPVQNTPGMVLDRPAERVASTSCCS 212
           KRLPRVQPVQNTPGMVLDRPAERV STSCCS
Sbjct: 181 KRLPRVQPVQNTPGMVLDRPAERVPSTSCCS 199

[Close]

BLAST of CmoCh13G004750 vs. ExPASy TrEMBL
Match: A0A1S3C8W6 (ras-related protein RABF2b OS=Cucumis melo OX=3656 GN=LOC103498306 PE=4 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 3.1e-100
Identity = 195/211 (92.42%), Postives = 196/211 (92.89%), Query Frame = 0


Query: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60
           MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60

Query: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFDRAKKWVQELQAQGNPNMVMAL 120
           FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQ SFDRAKKWVQELQAQGNPNMVMAL
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQGSFDRAKKWVQELQAQGNPNMVMAL 120

Query: 121 AGNKSDMLDSRSVAAEASTPNLSFLYSVDAQTYAQENGLFFMETSAKSAANVNDIFYEIA 180
           AGNKSD+LDSR VAAE            DAQTYAQENGLFFMETSAKSAANVNDIFYEIA
Sbjct: 121 AGNKSDLLDSRKVAAE------------DAQTYAQENGLFFMETSAKSAANVNDIFYEIA 180

Query: 181 KRLPRVQPVQNTPGMVLDRPAERVASTSCCS 212
           KRLPRVQPVQN PGMVLDRPAERVASTSCCS
Sbjct: 181 KRLPRVQPVQNAPGMVLDRPAERVASTSCCS 199

[Close]

BLAST of CmoCh13G004750 vs. ExPASy TrEMBL
Match: A0A6J1CLQ7 (ras-related protein RABF2b OS=Momordica charantia OX=3673 GN=LOC111012759 PE=4 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 9.1e-100
Identity = 194/211 (91.94%), Postives = 195/211 (92.42%), Query Frame = 0


Query: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60
           MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60

Query: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFDRAKKWVQELQAQGNPNMVMAL 120
           FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQ SFDRAKKWVQELQAQGNPNMVMAL
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQGSFDRAKKWVQELQAQGNPNMVMAL 120

Query: 121 AGNKSDMLDSRSVAAEASTPNLSFLYSVDAQTYAQENGLFFMETSAKSAANVNDIFYEIA 180
           AGNKSD+LDSR VA E            DAQTYAQENGLFFMETSAKSAANVNDIFYEIA
Sbjct: 121 AGNKSDLLDSRKVAVE------------DAQTYAQENGLFFMETSAKSAANVNDIFYEIA 180

Query: 181 KRLPRVQPVQNTPGMVLDRPAERVASTSCCS 212
           KRLPRVQPVQN PGMVLDRPAERVASTSCCS
Sbjct: 181 KRLPRVQPVQNAPGMVLDRPAERVASTSCCS 199

[Close]

BLAST of CmoCh13G004750 vs. ExPASy TrEMBL
Match: A0A6J1GV53 (ras-related protein RABF2b OS=Cucurbita moschata OX=3662 GN=LOC111457198 PE=4 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 2.6e-99
Identity = 193/211 (91.47%), Postives = 196/211 (92.89%), Query Frame = 0


Query: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60
           MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60

Query: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFDRAKKWVQELQAQGNPNMVMAL 120
           FEIWDTAGQERYHSLAPMYYRGAAAAIIV+DITNQASFDRAKKWVQELQAQGNPNMVMAL
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDITNQASFDRAKKWVQELQAQGNPNMVMAL 120

Query: 121 AGNKSDMLDSRSVAAEASTPNLSFLYSVDAQTYAQENGLFFMETSAKSAANVNDIFYEIA 180
           AGNKSD+LDSR V+AE            DAQTYAQENGLFFMETSAKSAANVNDIFYEIA
Sbjct: 121 AGNKSDLLDSRKVSAE------------DAQTYAQENGLFFMETSAKSAANVNDIFYEIA 180

Query: 181 KRLPRVQPVQNTPGMVLDRPAERVASTSCCS 212
           KRLPRVQPVQN PGMVLDRPAERVAS SCCS
Sbjct: 181 KRLPRVQPVQNAPGMVLDRPAERVASASCCS 199

[Close]

BLAST of CmoCh13G004750 vs. NCBI nr
Match: KAG7019431.1 (Ras-related protein RABF2b [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 389.0 bits (998), Expect = 2.5e-104
Identity = 207/224 (92.41%), Postives = 208/224 (92.86%), Query Frame = 0


Query: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60
           MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60

Query: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQ-------------ASFDRAKKWVQE 120
           FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQ             ASFDRAKKWVQE
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQVSGVLKTLDGLHMASFDRAKKWVQE 120

Query: 121 LQAQGNPNMVMALAGNKSDMLDSRSVAAEASTPNLSFLYSVDAQTYAQENGLFFMETSAK 180
           LQAQGNPNMVMALAGNKSDMLDSRSVAAEASTPN SF +S DAQTYAQENGLFFMETSAK
Sbjct: 121 LQAQGNPNMVMALAGNKSDMLDSRSVAAEASTPNPSFPFS-DAQTYAQENGLFFMETSAK 180

Query: 181 SAANVNDIFYEIAKRLPRVQPVQNTPGMVLDRPAERVASTSCCS 212
           SAANVNDIFYEIAKRLPRVQPVQNTPGMVLDRPAERVASTSCCS
Sbjct: 181 SAANVNDIFYEIAKRLPRVQPVQNTPGMVLDRPAERVASTSCCS 223

[Close]

BLAST of CmoCh13G004750 vs. NCBI nr
Match: XP_022927321.1 (ras-related protein RABF2b-like [Cucurbita moschata] >XP_023519554.1 ras-related protein RABF2b-like isoform X1 [Cucurbita pepo subsp. pepo] >KAG6583806.1 Ras-related protein RABF2b, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 380.6 bits (976), Expect = 9.0e-102
Identity = 199/211 (94.31%), Postives = 199/211 (94.31%), Query Frame = 0


Query: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60
           MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60

Query: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFDRAKKWVQELQAQGNPNMVMAL 120
           FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFDRAKKWVQELQAQGNPNMVMAL
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFDRAKKWVQELQAQGNPNMVMAL 120

Query: 121 AGNKSDMLDSRSVAAEASTPNLSFLYSVDAQTYAQENGLFFMETSAKSAANVNDIFYEIA 180
           AGNKSDMLDSRSVAAE            DAQTYAQENGLFFMETSAKSAANVNDIFYEIA
Sbjct: 121 AGNKSDMLDSRSVAAE------------DAQTYAQENGLFFMETSAKSAANVNDIFYEIA 180

Query: 181 KRLPRVQPVQNTPGMVLDRPAERVASTSCCS 212
           KRLPRVQPVQNTPGMVLDRPAERVASTSCCS
Sbjct: 181 KRLPRVQPVQNTPGMVLDRPAERVASTSCCS 199

[Close]

BLAST of CmoCh13G004750 vs. NCBI nr
Match: XP_023000928.1 (ras-related protein RABF2b-like [Cucurbita maxima])

HSP 1 Score: 378.6 bits (971), Expect = 3.4e-101
Identity = 198/211 (93.84%), Postives = 198/211 (93.84%), Query Frame = 0


Query: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60
           MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60

Query: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFDRAKKWVQELQAQGNPNMVMAL 120
           FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFDRAKKWVQELQAQGNPNMVMAL
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFDRAKKWVQELQAQGNPNMVMAL 120

Query: 121 AGNKSDMLDSRSVAAEASTPNLSFLYSVDAQTYAQENGLFFMETSAKSAANVNDIFYEIA 180
           AGNKSDMLDSRSVAAE            DAQTYAQENGLFFMETSAKSAANVNDIFYEIA
Sbjct: 121 AGNKSDMLDSRSVAAE------------DAQTYAQENGLFFMETSAKSAANVNDIFYEIA 180

Query: 181 KRLPRVQPVQNTPGMVLDRPAERVASTSCCS 212
           KRLPRVQPVQNTPGMVLDRPAERV STSCCS
Sbjct: 181 KRLPRVQPVQNTPGMVLDRPAERVPSTSCCS 199

[Close]

BLAST of CmoCh13G004750 vs. NCBI nr
Match: KAG7012595.1 (Ras-related protein RABF2b [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 377.5 bits (968), Expect = 7.6e-101
Identity = 196/211 (92.89%), Postives = 200/211 (94.79%), Query Frame = 0


Query: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60
           MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60

Query: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFDRAKKWVQELQAQGNPNMVMAL 120
           FEIWDTAGQERYHSLAPMYYRGAAAAIIV+DITNQASFDRAKKWVQELQAQGNPNMVMAL
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDITNQASFDRAKKWVQELQAQGNPNMVMAL 120

Query: 121 AGNKSDMLDSRSVAAEASTPNLSFLYSVDAQTYAQENGLFFMETSAKSAANVNDIFYEIA 180
           AGNKSD+LDSR V+AEAST       + DAQTYAQENGLFFMETSAKSAANVNDIFYEIA
Sbjct: 121 AGNKSDLLDSRKVSAEAST------LTPDAQTYAQENGLFFMETSAKSAANVNDIFYEIA 180

Query: 181 KRLPRVQPVQNTPGMVLDRPAERVASTSCCS 212
           KRLPRVQPVQN PGMVLDRPAERVAS SCCS
Sbjct: 181 KRLPRVQPVQNAPGMVLDRPAERVASASCCS 205

[Close]

BLAST of CmoCh13G004750 vs. NCBI nr
Match: XP_038895356.1 (ras-related protein RABF2b [Benincasa hispida])

HSP 1 Score: 375.9 bits (964), Expect = 2.2e-100
Identity = 196/211 (92.89%), Postives = 197/211 (93.36%), Query Frame = 0


Query: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60
           MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60

Query: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFDRAKKWVQELQAQGNPNMVMAL 120
           FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFDRAKKWVQELQAQGNPNMVMAL
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFDRAKKWVQELQAQGNPNMVMAL 120

Query: 121 AGNKSDMLDSRSVAAEASTPNLSFLYSVDAQTYAQENGLFFMETSAKSAANVNDIFYEIA 180
           AGNKSD+LDSR VAAE            DAQTYAQENGLFFMETSAKSAANVNDIFYEIA
Sbjct: 121 AGNKSDLLDSRKVAAE------------DAQTYAQENGLFFMETSAKSAANVNDIFYEIA 180

Query: 181 KRLPRVQPVQNTPGMVLDRPAERVASTSCCS 212
           KRLPRVQPVQN PGMVLDRPAERVASTSCCS
Sbjct: 181 KRLPRVQPVQNAPGMVLDRPAERVASTSCCS 199

[Close]

BLAST of CmoCh13G004750 vs. TAIR 10
Match: AT4G19640.1 (Ras-related small GTP-binding family protein )

HSP 1 Score: 331.6 bits (849), Expect = 4.5e-91
Identity = 172/212 (81.13%), Postives = 186/212 (87.74%), Query Frame = 0


Query: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60
           MA +GNK+INAKLVLLGDVGAGKSSLVLRFVK QFVEFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1   MAAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVK 60

Query: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFDRAKKWVQELQAQGNPNMVMAL 120
           FEIWDTAGQERYHSLAPMYYRGAAAAIIV+D+TNQASF+RAKKWVQELQAQGNPNMVMAL
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMAL 120

Query: 121 AGNKSDMLDSRSVAAEASTPNLSFLYSVDAQTYAQENGLFFMETSAKSAANVNDIFYEIA 180
           AGNKSD+LD+R V AE            DAQTYAQENGLFFMETSAK+A NV +IFYEIA
Sbjct: 121 AGNKSDLLDARKVTAE------------DAQTYAQENGLFFMETSAKTATNVKEIFYEIA 180

Query: 181 KRLPRVQPVQNTPGMVL-DRPAERVASTSCCS 212
           +RLPRVQP +N  GMVL DR  +R  S+SCC+
Sbjct: 181 RRLPRVQPTENPTGMVLPDRAMDRAVSSSCCA 200

[Close]

BLAST of CmoCh13G004750 vs. TAIR 10
Match: AT5G45130.1 (RAB homolog 1 )

HSP 1 Score: 325.5 bits (833), Expect = 3.2e-89
Identity = 170/212 (80.19%), Postives = 184/212 (86.79%), Query Frame = 0


Query: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60
           MA+SGNKNINAKLVLLGDVGAGKSSLVLRFVK QFVEFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1   MASSGNKNINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVK 60

Query: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFDRAKKWVQELQAQGNPNMVMAL 120
           FEIWDTAGQERYHSLAPMYYRGAAAAIIV+DITNQASF+RAKKWVQELQAQGNPNMVMAL
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDITNQASFERAKKWVQELQAQGNPNMVMAL 120

Query: 121 AGNKSDMLDSRSVAAEASTPNLSFLYSVDAQTYAQENGLFFMETSAKSAANVNDIFYEIA 180
           AGNK+D+LD+R V+AE            +A+ YAQEN LFFMETSAK+A NV DIFYEIA
Sbjct: 121 AGNKADLLDARKVSAE------------EAEIYAQENSLFFMETSAKTATNVKDIFYEIA 180

Query: 181 KRLPRVQPVQNTPGMVL-DRPAERVASTSCCS 212
           KRLPRVQP +N  GMVL + P     S+SCC+
Sbjct: 181 KRLPRVQPAENPTGMVLPNGPGATAVSSSCCA 200

[Close]

BLAST of CmoCh13G004750 vs. TAIR 10
Match: AT3G54840.1 (Ras-related small GTP-binding family protein )

HSP 1 Score: 203.8 bits (517), Expect = 1.4e-52
Identity = 104/183 (56.83%), Postives = 133/183 (72.68%), Query Frame = 0


Query: 7   KNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDA-TVKFEIWD 66
           KN+  KLVLLGD G GKS +VLRFV+GQF    + T+GA+F SQT+A+ D+ TVKFEIWD
Sbjct: 30  KNLRVKLVLLGDSGVGKSCIVLRFVRGQFDATSKVTVGASFLSQTIALQDSTTVKFEIWD 89

Query: 67  TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFDRAKKWVQELQAQGNPNMVMALAGNKS 126
           TAGQERY +LAP+YYRGA  A+IVYDIT+  SF +A+ WV+ELQ  G+P++VMAL GNK+
Sbjct: 90  TAGQERYSALAPLYYRGAGVAVIVYDITSPESFKKAQYWVKELQKHGSPDIVMALVGNKA 149

Query: 127 DMLDSRSVAAEASTPNLSFLYSVDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPR 186
           D+ + R V  E            D    A++NG+FF+ETSAK+A N+N +F EI KRLPR
Sbjct: 150 DLHEKREVPTE------------DGMELAEKNGMFFIETSAKTADNINQLFEEIGKRLPR 200

Query: 187 VQP 189
             P
Sbjct: 210 PAP 200

[Close]

BLAST of CmoCh13G004750 vs. TAIR 10
Match: AT3G54840.2 (Ras-related small GTP-binding family protein )

HSP 1 Score: 189.9 bits (481), Expect = 2.1e-48
Identity = 96/171 (56.14%), Postives = 125/171 (73.10%), Query Frame = 0


Query: 7   KNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDA-TVKFEIWD 66
           KN+  KLVLLGD G GKS +VLRFV+GQF    + T+GA+F SQT+A+ D+ TVKFEIWD
Sbjct: 30  KNLRVKLVLLGDSGVGKSCIVLRFVRGQFDATSKVTVGASFLSQTIALQDSTTVKFEIWD 89

Query: 67  TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFDRAKKWVQELQAQGNPNMVMALAGNKS 126
           TAGQERY +LAP+YYRGA  A+IVYDIT+  SF +A+ WV+ELQ  G+P++VMAL GNK+
Sbjct: 90  TAGQERYSALAPLYYRGAGVAVIVYDITSPESFKKAQYWVKELQKHGSPDIVMALVGNKA 149

Query: 127 DMLDSRSVAAEASTPNLSFLYSVDAQTYAQENGLFFMETSAKSAANVNDIF 177
           D+ + R V  E            D    A++NG+FF+ETSAK+A N+N +F
Sbjct: 150 DLHEKREVPTE------------DGMELAEKNGMFFIETSAKTADNINQLF 188

[Close]

BLAST of CmoCh13G004750 vs. TAIR 10
Match: AT1G16920.1 (RAB GTPase homolog A1B )

HSP 1 Score: 151.8 bits (382), Expect = 6.3e-37
Identity = 77/175 (44.00%), Postives = 112/175 (64.00%), Query Frame = 0


Query: 12  KLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
           K+VL+GD G GKS+L+ RF K +F    +STIG  F ++TL V+   VK +IWDTAGQER
Sbjct: 15  KVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVVKAQIWDTAGQER 74

Query: 72  YHSLAPMYYRGAAAAIIVYDITNQASFDRAKKWVQELQAQGNPNMVMALAGNKSDMLDSR 131
           Y ++   YYRGA  A++VYD+T +A+F+   +W++EL+   +PN+V+ L GNKSD+    
Sbjct: 75  YRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGNKSDLRHLL 134

Query: 132 SVAAEASTPNLSFLYSVDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRV 187
           +V  E            D ++YA++  L FMETSA  A NV D F E+  ++ R+
Sbjct: 135 AVPTE------------DGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRI 177

The following BLAST results are available for this feature:

BLAST of CmoCh13G004750 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SN68	6.3e-90	81.13	Ras-related protein RABF2b OS=Arabidopsis thaliana OX=3702 GN=RABF2B PE=1 SV=1	[more]
P31582	4.5e-88	80.19	Ras-related protein RABF2a OS=Arabidopsis thaliana OX=3702 GN=RABF2A PE=1 SV=1	[more]
Q0ILQ6	1.7e-82	77.93	Ras-related protein Rab5A OS=Oryza sativa subsp. japonica OX=39947 GN=RAB5A PE=1...	[more]
P31583	1.7e-82	75.94	Ras-related protein RHN1 OS=Nicotiana plumbaginifolia OX=4092 GN=RHN1 PE=2 SV=1	[more]
P29687	9.1e-81	73.58	Ras-related protein Rab5 OS=Nicotiana tabacum OX=4097 GN=RAB5 PE=2 SV=1	[more]

BLAST of CmoCh13G004750 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EHC6	4.4e-102	94.31	ras-related protein RABF2b-like OS=Cucurbita moschata OX=3662 GN=LOC111434185 PE...	[more]
A0A6J1KP17	1.7e-101	93.84	ras-related protein RABF2b-like OS=Cucurbita maxima OX=3661 GN=LOC111495218 PE=4...	[more]
A0A1S3C8W6	3.1e-100	92.42	ras-related protein RABF2b OS=Cucumis melo OX=3656 GN=LOC103498306 PE=4 SV=1	[more]
A0A6J1CLQ7	9.1e-100	91.94	ras-related protein RABF2b OS=Momordica charantia OX=3673 GN=LOC111012759 PE=4 S...	[more]
A0A6J1GV53	2.6e-99	91.47	ras-related protein RABF2b OS=Cucurbita moschata OX=3662 GN=LOC111457198 PE=4 SV...	[more]

BLAST of CmoCh13G004750 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7019431.1	2.5e-104	92.41	Ras-related protein RABF2b [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022927321.1	9.0e-102	94.31	ras-related protein RABF2b-like [Cucurbita moschata] >XP_023519554.1 ras-related...	[more]
XP_023000928.1	3.4e-101	93.84	ras-related protein RABF2b-like [Cucurbita maxima]	[more]
KAG7012595.1	7.6e-101	92.89	Ras-related protein RABF2b [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_038895356.1	2.2e-100	92.89	ras-related protein RABF2b [Benincasa hispida]	[more]

BLAST of CmoCh13G004750 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G19640.1	4.5e-91	81.13	Ras-related small GTP-binding family protein	[more]
AT5G45130.1	3.2e-89	80.19	RAB homolog 1	[more]
AT3G54840.1	1.4e-52	56.83	Ras-related small GTP-binding family protein	[more]
AT3G54840.2	2.1e-48	56.14	Ras-related small GTP-binding family protein	[more]
AT1G16920.1	6.3e-37	44.00	RAB GTPase homolog A1B	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 161..183 score: 40.38 coord: 52..74 score: 46.26 coord: 11..32 score: 47.13 coord: 34..50 score: 30.56 coord: 114..127 score: 43.62
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 16..211 e-value: 5.3E-5 score: 22.1
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 11..186 e-value: 5.2E-69 score: 245.3
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 12..186 e-value: 6.3E-20 score: 82.2
None	No IPR available	PANTHER	PTHR24073:SF1090	RAS-RELATED PROTEIN RABF2B	coord: 1..211
None	No IPR available	PANTHER	PTHR24073	DRAB5-RELATED	coord: 1..211
None	No IPR available	PROSITE	PS51420	RHO	coord: 2..189 score: 8.645014
None	No IPR available	PROSITE	PS51419	RAB	coord: 6..210 score: 30.818422
None	No IPR available	CDD	cd01860	Rab5_related	coord: 10..184 e-value: 3.97403E-110 score: 310.638
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 13..186 e-value: 8.1E-11 score: 19.2
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 12..183 e-value: 5.9E-54 score: 182.0
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 5..197 score: 15.010041
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 11..179 e-value: 4.7E-24 score: 83.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1..191 e-value: 1.9E-61 score: 208.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 11..183

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh13G004750.1	CmoCh13G004750.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0030139	endocytic vesicle
cellular_component	GO:0005768	endosome
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding