![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
CmoCh13G004510 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACACACCTTGATTTTGCGGGTTTTCGAAGTCTTTCTCGCTCTGGTTGATTGGGGAAGCCAATGGCTGCAGGGACATCTTTCTTGAGGTGTTCTTTGTTCTTCCCATCTTTGTAGCATTTTCTGTCACAATGAAATGTGAAATTGTTTGTTTTGGTATGAAACTCGCAGGCAATGTATAGCTACGACTACCAGAACATTGGTGACTGCGAAATTGAAACATTCCGGCAATCACTTCACGGCCTTTCTCCTTCCACTTCGTACTAGCTCTCGAAGGTAGACAAGCTTTTTCTATGTATTTACGAGGATTATGTTGAAATCAAGAAGTTTGTTTTTATGGCTTTGGCTTATTATGACTGCAATATATGGGAGCGAAGAAATGTTATCCATCTTGTTGAAATATGTATGGAGCCCCTAGTTTCTACCTCTGAAATGTAAACAGTATCTGACTGTTGACACTAGAAGATTTTCTAATTTTGTTCGAGAGGGATGGTGTGAGATCCCACGTCGGTTGGAGAGGAGAACGAATCATTCTTTAGAAAGGTGTGGAAACCTCTCTCTAGAATACGCGTTTTAAAAACCTTGAGGAGAAGCTCGAAAGGGAAAGAGAGAGGATAATATCTGCTAGCGATGGGCTCGGGTTGATACAAATGGTATCAGAGCCAGATACCAGGCGATGTGCTAACGAGGACGCTGAGTCCCAAAGGGGAGTGGACACGAGGGGGTGTGCCAGCAAGGACGTTAGGACCCAAAGGGGGGTGAATTGGGGGAGTCCCACACCGATTAGAGAAGGGAACGAGTGTCAATGAAGACGTTGGCCCCGAAGAGGTGTGGATTGCGAGATCCTACATTGGTTGGGGAAGAGAACAAAGCATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCAAACATGTTTTAAAAACCTAAAGGGAAAACCCGAAAGGGAAAGCTCAAACATCTTAATAAAATTTTAATTCCATTTGAATTTCCAATAGTTGATCTCTTCCCACTATTCCAATAAGCTAGCTATTCAAGTACTGACATAGTTTTTATTGCTGCATTGTATTTTCTCCAGATTGACCATTCGTGCTAGCAGCACAAACAATGAAGAACTTGCTGCTAAAGCAGCTGCATCTGATGCAGACAGTGGAGCTCCAACCATGTATGTCTTTAATAAATTATTCAGGCTGATTAGATGTTGCTAAAGCCTTAAAATTCCATTATCCAAGAATTAAGCTTGAAGAATTATTATTCACTTGTAAGAAGATATGCATGCTAGTGTGAAAAAATTATCAACTCTTGAACAAAGCAAAGGGATATATTGCCTTCCCGGATCAAAATATTAGGTGTGAAACTAAGCTACGTCTCATGTTTAGGATCTAAATCTAGGCATTATTAAGGTTAACATGTGTCAAGAAAACCAAGTCTCGAGAAAGAGACGATGTTCGGGTTTGAGCCATTTGAATTGTGTTTCAAATTCTTTACTGGAAGCTTTTTGTAACGACCCAAGCCCACACTAGCAGACATTGTCCTCTTTGGGTTTTCCCTTCCGGGCTTCTCCTTAAGGTTTTAAGATGCGTCTACTAGGGAGAGGTTTCCACACCCTTATAAGTAATGTTTTGTTCCCTCCTCCAACCAACGTGGGATCTCACAATCTATCCCCCTTGGGGACCCAGTGTCCTCGCTGATACATTGTTCGGAACTTGGCTCTGATACCATTTGTAATGGCCCAAGCCCACGTTTGCAGATATTATCCTCTTTGGCCTTTCCCTTCTCAGCTTCCCTTCAAGGTTTTATAACGTGTCTACTAGGGAGAGGTTTCCACACTCTTATAAGAAATATTTCGTTCCCCTCTCCGACCAATGTAGGATCTCACACTTTTTTTATCTTTTAAGATACTGGTCAATGTTAGATGTTAAAAGAAAATAGTTAGACTGATATTGAGCTTATACTTTCTGGAATTGATATTCTTTGACATTTTTGCTTCAGATTTGACAAAATAATAGCCAAGGAAATTCCTTCAAACATCGTTTATGAGGATGAGAAGGTCCTTGCATTTCGAGACATAAATCCACAAGCTCCTGTTCATATATTAATCATTCCAAAGCTCAGAGATGGATTGACGGAGCTGGGAAAGGTGTTTCTTTTTTCCTCCTCTTGTTCTTATCTCTCTATACTATCTGTGCACATACTGAGTTCCTCTGAAATAGCATATTAAGTGTTCCTTTTTCTCTTTGATTCCTTTCTTTCTTTCATTCTTTTGTTTTTTTGTTTTTCCTACAAAGTATATAAACGTGAGCAAACAGTTTAGATATAGTGTATTATCGATTCTGGGTGATTTTTTATGCATTCATGGGCTATTTGGTGATAGGAGGTCTACATATCTGACATCTGGATAACTAGGAATTGAATGCCCAATAAATTAGATAACTATGTTTCTTGAGTAGAATAAGCTCATATTACTCTTTTTATATCTCTTTTTCCAAAAGTAATACCCTTCTGAATATTAAGTTTGTCAACCACACTTCTTTTTCCTTTTTTCTTTTTTCGTTCTTTCTTTCCTTTTTTTAGCTGGAGGCCTAGAATGGATTACCGCTCAAGCCTACCGCTAGCAGATGTTGTCCTCTTTGGACTTTTCCTTTCGGGTTTTCCCTCAAAGTTTTTAAAATGCATCTAATAGGGAGAGGTTTTCACACACTTATAAAAAATGCTTTGTTGCCCTCTCCAACCGACGTGGGATCCCACAATCCACCCCTCACTCGTTCCCTTCTCCAATCGATGTGGGACCCTCCAATCCACTCCTCTTTGAGACTCAACGTCCTTGTTGACACACTGCCTTGTGTCCTATTGTGAGGTCGCACATCGGTTGAAGAGGAGAACAAAACATTTTTTGTAAGGGTGTGGAAATCTCTCCCTAGCAGACACGTTTTAAAAATCTTAAGGGGAAGCTCAAAGAGGACAATATCTGCCAGTGGTGGGCTTGGACTGTTACGGTTTTGCACTAATTTGAGCTCTTCTTCTTGAAGATGCAGTTTGCTTGTGATCATCTGTTGATGCTGTGTTTAAGCATTTAATAAGCCCAAATGTGTGAAATTGAGGTGTGTATGAACTTGTTAGGCTGAAGCAAGACATGGGGAGATACTGGGTCAGCTGCTATATGCAGCAAAAATAGTGGCCGAGAAAGAGGGTATTGTTGAAGGATTTCGTGTAGTGATCAACAGTGGTGCAAGTGCTTGTAAGCCTCAGCAACCATCTATGGTGTTCTTCTGTCTCTGCTTTTGGTACCATCTTACACTGATATCTCTCTTCCTCACACCAGGTCAATCTGTGTATCATCTTCACCTGCACGTCCTGGGAGGGAGACAGCTGAAGTGGCCTCCAGGTTGAACCCAATTCCATTACATTTTCTAATATAACATACTAAACTGTTCTTCGTATATTTTCTTGTATCACATAACAAAAATAAAGGATTGCAATGATTTCTTTAGATGACTTGGATGAATCTATCAGAAGGCCATTTCCTCCACGCCCATAGCTTCGAG ACACACCTTGATTTTGCGGGTTTTCGAAGTCTTTCTCGCTCTGGTTGATTGGGGAAGCCAATGGCTGCAGGGACATCTTTCTTGAGGCAATGTATAGCTACGACTACCAGAACATTGGTGACTGCGAAATTGAAACATTCCGGCAATCACTTCACGGCCTTTCTCCTTCCACTTCGTACTAGCTCTCGAAGATTGACCATTCGTGCTAGCAGCACAAACAATGAAGAACTTGCTGCTAAAGCAGCTGCATCTGATGCAGACAGTGGAGCTCCAACCATATTTGACAAAATAATAGCCAAGGAAATTCCTTCAAACATCGTTTATGAGGATGAGAAGGTCCTTGCATTTCGAGACATAAATCCACAAGCTCCTGTTCATATATTAATCATTCCAAAGCTCAGAGATGGATTGACGGAGCTGGGAAAGGCTGAAGCAAGACATGGGGAGATACTGGGTCAGCTGCTATATGCAGCAAAAATAGTGGCCGAGAAAGAGGGTATTGTTGAAGGATTTCGTGTAGTGATCAACAGTGGTGCAAGTGCTTGTCAATCTGTGTATCATCTTCACCTGCACGTCCTGGGAGGGAGACAGCTGAAGTGGCCTCCAGGTTGAACCCAATTCCATTACATTTTCTAATATAACATACTAAACTGTTCTTCGTATATTTTCTTGTATCACATAACAAAAATAAAGGATTGCAATGATTTCTTTAGATGACTTGGATGAATCTATCAGAAGGCCATTTCCTCCACGCCCATAGCTTCGAG ATGGCTGCAGGGACATCTTTCTTGAGGCAATGTATAGCTACGACTACCAGAACATTGGTGACTGCGAAATTGAAACATTCCGGCAATCACTTCACGGCCTTTCTCCTTCCACTTCGTACTAGCTCTCGAAGATTGACCATTCGTGCTAGCAGCACAAACAATGAAGAACTTGCTGCTAAAGCAGCTGCATCTGATGCAGACAGTGGAGCTCCAACCATATTTGACAAAATAATAGCCAAGGAAATTCCTTCAAACATCGTTTATGAGGATGAGAAGGTCCTTGCATTTCGAGACATAAATCCACAAGCTCCTGTTCATATATTAATCATTCCAAAGCTCAGAGATGGATTGACGGAGCTGGGAAAGGCTGAAGCAAGACATGGGGAGATACTGGGTCAGCTGCTATATGCAGCAAAAATAGTGGCCGAGAAAGAGGGTATTGTTGAAGGATTTCGTGTAGTGATCAACAGTGGTGCAAGTGCTTGTCAATCTGTGTATCATCTTCACCTGCACGTCCTGGGAGGGAGACAGCTGAAGTGGCCTCCAGGTTGA MAAGTSFLRQCIATTTRTLVTAKLKHSGNHFTAFLLPLRTSSRRLTIRASSTNNEELAAKAAASDADSGAPTIFDKIIAKEIPSNIVYEDEKVLAFRDINPQAPVHILIIPKLRDGLTELGKAEARHGEILGQLLYAAKIVAEKEGIVEGFRVVINSGASACQSVYHLHLHVLGGRQLKWPPG Homology
BLAST of CmoCh13G004510 vs. ExPASy Swiss-Prot
Match: P42856 (14 kDa zinc-binding protein OS=Zea mays OX=4577 GN=ZBP14 PE=1 SV=1) HSP 1 Score: 187.6 bits (475), Expect = 1.3e-46 Identity = 89/124 (71.77%), Postives = 103/124 (83.06%), Query Frame = 0
BLAST of CmoCh13G004510 vs. ExPASy Swiss-Prot
Match: Q8GUN2 (Adenylylsulfatase HINT1 OS=Arabidopsis thaliana OX=3702 GN=HINT1 PE=1 SV=1) HSP 1 Score: 187.2 bits (474), Expect = 1.7e-46 Identity = 89/135 (65.93%), Postives = 110/135 (81.48%), Query Frame = 0
BLAST of CmoCh13G004510 vs. ExPASy Swiss-Prot
Match: P42855 (14 kDa zinc-binding protein (Fragment) OS=Brassica juncea OX=3707 PE=2 SV=1) HSP 1 Score: 177.9 bits (450), Expect = 1.0e-43 Identity = 80/112 (71.43%), Postives = 97/112 (86.61%), Query Frame = 0
BLAST of CmoCh13G004510 vs. ExPASy Swiss-Prot
Match: Q8SQ21 (Histidine triad nucleotide-binding protein 2, mitochondrial OS=Bos taurus OX=9913 GN=HINT2 PE=2 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 4.0e-32 Identity = 68/135 (50.37%), Postives = 95/135 (70.37%), Query Frame = 0
BLAST of CmoCh13G004510 vs. ExPASy Swiss-Prot
Match: Q9BX68 (Histidine triad nucleotide-binding protein 2, mitochondrial OS=Homo sapiens OX=9606 GN=HINT2 PE=1 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 6.8e-32 Identity = 68/135 (50.37%), Postives = 93/135 (68.89%), Query Frame = 0
BLAST of CmoCh13G004510 vs. ExPASy TrEMBL
Match: A0A6J1EGC5 (14 kDa zinc-binding protein-like OS=Cucurbita moschata OX=3662 GN=LOC111434087 PE=4 SV=1) HSP 1 Score: 356.7 bits (914), Expect = 5.9e-95 Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0
BLAST of CmoCh13G004510 vs. ExPASy TrEMBL
Match: A0A6J1KR15 (14 kDa zinc-binding protein-like OS=Cucurbita maxima OX=3661 GN=LOC111495692 PE=4 SV=1) HSP 1 Score: 349.7 bits (896), Expect = 7.2e-93 Identity = 177/183 (96.72%), Postives = 183/183 (100.00%), Query Frame = 0
BLAST of CmoCh13G004510 vs. ExPASy TrEMBL
Match: A0A6J1CN26 (14 kDa zinc-binding protein-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111012630 PE=4 SV=1) HSP 1 Score: 339.7 bits (870), Expect = 7.4e-90 Identity = 172/183 (93.99%), Postives = 179/183 (97.81%), Query Frame = 0
BLAST of CmoCh13G004510 vs. ExPASy TrEMBL
Match: A0A1S3C9B7 (14 kDa zinc-binding protein isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498251 PE=4 SV=1) HSP 1 Score: 335.9 bits (860), Expect = 1.1e-88 Identity = 169/183 (92.35%), Postives = 177/183 (96.72%), Query Frame = 0
BLAST of CmoCh13G004510 vs. ExPASy TrEMBL
Match: A0A5D3CK60 (14 kDa zinc-binding protein isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G00590 PE=4 SV=1) HSP 1 Score: 335.5 bits (859), Expect = 1.4e-88 Identity = 168/183 (91.80%), Postives = 177/183 (96.72%), Query Frame = 0
BLAST of CmoCh13G004510 vs. NCBI nr
Match: XP_022927152.1 (14 kDa zinc-binding protein-like [Cucurbita moschata] >KAG6583782.1 Adenylylsulfatase HINT1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 356.7 bits (914), Expect = 1.2e-94 Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0
BLAST of CmoCh13G004510 vs. NCBI nr
Match: XP_023519175.1 (14 kDa zinc-binding protein-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 356.3 bits (913), Expect = 1.6e-94 Identity = 182/183 (99.45%), Postives = 183/183 (100.00%), Query Frame = 0
BLAST of CmoCh13G004510 vs. NCBI nr
Match: KAG7019407.1 (14 kDa zinc-binding protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 355.1 bits (910), Expect = 3.5e-94 Identity = 181/183 (98.91%), Postives = 183/183 (100.00%), Query Frame = 0
BLAST of CmoCh13G004510 vs. NCBI nr
Match: XP_023001618.1 (14 kDa zinc-binding protein-like [Cucurbita maxima]) HSP 1 Score: 349.7 bits (896), Expect = 1.5e-92 Identity = 177/183 (96.72%), Postives = 183/183 (100.00%), Query Frame = 0
BLAST of CmoCh13G004510 vs. NCBI nr
Match: XP_022142542.1 (14 kDa zinc-binding protein-like isoform X1 [Momordica charantia]) HSP 1 Score: 339.7 bits (870), Expect = 1.5e-89 Identity = 172/183 (93.99%), Postives = 179/183 (97.81%), Query Frame = 0
BLAST of CmoCh13G004510 vs. TAIR 10
Match: AT1G31160.1 (HISTIDINE TRIAD NUCLEOTIDE-BINDING 2 ) HSP 1 Score: 235.3 bits (599), Expect = 3.8e-62 Identity = 115/144 (79.86%), Postives = 129/144 (89.58%), Query Frame = 0
BLAST of CmoCh13G004510 vs. TAIR 10
Match: AT3G56490.1 (HIS triad family protein 3 ) HSP 1 Score: 187.2 bits (474), Expect = 1.2e-47 Identity = 89/135 (65.93%), Postives = 110/135 (81.48%), Query Frame = 0
BLAST of CmoCh13G004510 vs. TAIR 10
Match: AT5G48545.1 (histidine triad nucleotide-binding 3 ) HSP 1 Score: 50.8 bits (120), Expect = 1.3e-06 Identity = 45/149 (30.20%), Postives = 63/149 (42.28%), Query Frame = 0
BLAST of CmoCh13G004510 vs. TAIR 10
Match: AT4G16566.1 (histidine triad nucleotide-binding 4 ) HSP 1 Score: 43.5 bits (101), Expect = 2.1e-04 Identity = 29/101 (28.71%), Postives = 51/101 (50.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|