CmoCh13G004070 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh13G004070
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	ras-related protein RABA5a-like
Location	Cmo_Chr13: 5150006 .. 5151267 (+)
RNA-Seq Expression	CmoCh13G004070
Synteny	CmoCh13G004070

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGAAAAAACTGAGGAGGAAAAAACTGAGGATTATCTTTTCAAGATTGTTTTAGTTGGTGATTCAGCCGTGGGAAAATCGAATCTACTCGCTAGATTTGCTAGAGATGAATTTTACCCTAATTCAAAATCAACTATTGGAGTGGAGTTCCAAACCCAAAAGATGGAAATAAATGGAAAGGAAATCAAAGCTCAAATATGGGATACAGCTGGTCAAGAGCGATTTAGGGCTGTTACATCTGCATATTATAGAGGAGCTGTTGGAGCTCTCCTGGTATACGACATTAGTAGGCGCCAGACCTTTGACAGCATTGGGAGATGGCTGAATGAACTTCACAGTGAGTATTATAAAGATGCTATCTAATGTTTCTTGAAAATAAAATCTCCAATCTTACGTTGTTATACCTTTTTATTTGATTATGCTTCAAGTTATTGGACTGGTTGACTTCTCATTATTCTATCTGACTGTATTACCATATCTTTTTTGTGAATATTTGGACATCATTTTATGTTGAAAAAAAAATTATGTAACAGCGATTTCCTTTCTGGAAATGGTAGAATATTCTTTAAGTAATGAAAGATTATAAGTTGGAATGTCCTCAAGAGCTGCATCTGAATTAGAAATAGTTGTAATTACATGGTCATAGTGTTGAATCAACGCTGGAAAAGGGTGAAGCAATTGGTTTTGATGTTGGGAACTTTGCGTTGTGTTTATAATCTGAAAGGACTGATTGGGGAATCTTTTATTGAACAGCTCATTCTGACATGAACGTAGTAACCATACTGGTTGGCAACAAGTCTGATCTGAAGGATGCTAGAGATGTATCTACATCTGAAGGCAAGTCTTTGGCAGAAGCTCAGGGTCTGTTCTTTATTGAAACCTCCGCCCTCGATTCCTCGAATGTGACGAACGCGTTTCAGACGGTTGTGAAAGAGATCTACAACATATTGAGCCGAAAAGTTATGATATCTCAAGAACTTAACAAGCAGGATGTTAGCTGGATGGAGGATGGAAAGACGACTGTAGTTATACAGGGAGAGGAGGAGCAAGTAGTTGAAGAGCCCAAACAAGGTGGTGGGTGCTGCTGATCCCAAGTAATTTACTTATATAATATTGGAATCCCTTCTCTCATTTATTCTCTGCTCATTATATAGTATCATCTTCTTCTTCTCCATCTGGTTGAATTTTCTTCAGTCACTGAATCTGCTTTCCATTTCTTTCTTCTTCTTCTTCTTCTGCAATTCTGGGTAACATTGATT

mRNA sequence

ATGGAGGAAAAAACTGAGGAGGAAAAAACTGAGGATTATCTTTTCAAGATTGTTTTAGTTGGTGATTCAGCCGTGGGAAAATCGAATCTACTCGCTAGATTTGCTAGAGATGAATTTTACCCTAATTCAAAATCAACTATTGGAGTGGAGTTCCAAACCCAAAAGATGGAAATAAATGGAAAGGAAATCAAAGCTCAAATATGGGATACAGCTGGTCAAGAGCGATTTAGGGCTGTTACATCTGCATATTATAGAGGAGCTGTTGGAGCTCTCCTGGTATACGACATTAGTAGGCGCCAGACCTTTGACAGCATTGGGAGATGGCTGAATGAACTTCACACTCATTCTGACATGAACGTAGTAACCATACTGGTTGGCAACAAGTCTGATCTGAAGGATGCTAGAGATGTATCTACATCTGAAGGCAAGTCTTTGGCAGAAGCTCAGGGTCTGTTCTTTATTGAAACCTCCGCCCTCGATTCCTCGAATGTGACGAACGCGTTTCAGACGGTTGTGAAAGAGATCTACAACATATTGAGCCGAAAAGTTATGATATCTCAAGAACTTAACAAGCAGGATGTTAGCTGGATGGAGGATGGAAAGACGACTGTAGTTATACAGGGAGAGGAGGAGCAAGTAGTTGAAGAGCCCAAACAAGGTGTCACTGAATCTGCTTTCCATTTCTTTCTTCTTCTTCTTCTTCTGCAATTCTGGGTAACATTGATT

Coding sequence (CDS)

ATGGAGGAAAAAACTGAGGAGGAAAAAACTGAGGATTATCTTTTCAAGATTGTTTTAGTTGGTGATTCAGCCGTGGGAAAATCGAATCTACTCGCTAGATTTGCTAGAGATGAATTTTACCCTAATTCAAAATCAACTATTGGAGTGGAGTTCCAAACCCAAAAGATGGAAATAAATGGAAAGGAAATCAAAGCTCAAATATGGGATACAGCTGGTCAAGAGCGATTTAGGGCTGTTACATCTGCATATTATAGAGGAGCTGTTGGAGCTCTCCTGGTATACGACATTAGTAGGCGCCAGACCTTTGACAGCATTGGGAGATGGCTGAATGAACTTCACACTCATTCTGACATGAACGTAGTAACCATACTGGTTGGCAACAAGTCTGATCTGAAGGATGCTAGAGATGTATCTACATCTGAAGGCAAGTCTTTGGCAGAAGCTCAGGGTCTGTTCTTTATTGAAACCTCCGCCCTCGATTCCTCGAATGTGACGAACGCGTTTCAGACGGTTGTGAAAGAGATCTACAACATATTGAGCCGAAAAGTTATGATATCTCAAGAACTTAACAAGCAGGATGTTAGCTGGATGGAGGATGGAAAGACGACTGTAGTTATACAGGGAGAGGAGGAGCAAGTAGTTGAAGAGCCCAAACAAGGTGTCACTGAATCTGCTTTCCATTTCTTTCTTCTTCTTCTTCTTCTGCAATTCTGGGTAACATTGATT

Protein sequence

MEEKTEEEKTEDYLFKIVLVGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEINGKEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDARDVSTSEGKSLAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILSRKVMISQELNKQDVSWMEDGKTTVVIQGEEEQVVEEPKQGVTESAFHFFLLLLLLQFWVTLI

Homology

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BLAST of CmoCh13G004070 vs. ExPASy Swiss-Prot
Match: Q9FGK5 (Ras-related protein RABA5a OS=Arabidopsis thaliana OX=3702 GN=RABA5A PE=1 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 1.7e-94
Identity = 176/201 (87.56%), Postives = 191/201 (95.02%), Query Frame = 0


Query: 5   TEEEKTEDYLFKIVLVGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEINGKEIK 64
           +E++K+EDYLFKIVL+GDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKM+INGKEIK
Sbjct: 5   SEDDKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEIK 64

Query: 65  AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124
           AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTF SIGRWLNELHTHSDMNVVTIL
Sbjct: 65  AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFHSIGRWLNELHTHSDMNVVTIL 124

Query: 125 VGNKSDLKDARDVSTSEGKSLAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILSRKVM 184
           VGNKSDLKD R+VST+EGK+LAEAQGLFF+ETSALDSSNV  AF+TVVKEIYNILSRKVM
Sbjct: 125 VGNKSDLKDLREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRKVM 184

Query: 185 ISQELNKQDVSWMEDGKTTVV 206
            SQELNKQD + + +GK  V+
Sbjct: 185 SSQELNKQDPASLSNGKKVVI 205

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BLAST of CmoCh13G004070 vs. ExPASy Swiss-Prot
Match: P28187 (Ras-related protein RABA5c OS=Arabidopsis thaliana OX=3702 GN=RABA5C PE=1 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 7.0e-69
Identity = 127/187 (67.91%), Postives = 160/187 (85.56%), Query Frame = 0


Query: 6   EEEKTEDYLFKIVLVGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEINGKEIKA 65
           ++E+ E+YLFKIV++GDSAVGKSNLL R+AR+EF PNSK+TIGVEFQTQ M I+GKE+KA
Sbjct: 4   DDERGEEYLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEVKA 63

Query: 66  QIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILV 125
           QIWDTAGQERFRAVTSAYYRGAVGAL+VYDI+R  TF+++GRWL+EL+THSD  V  +L+
Sbjct: 64  QIWDTAGQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKMLI 123

Query: 126 GNKSDLKDARDVSTSEGKSLAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILSRKVMI 185
           GNK DL+  R VS  EGKSLAE++GLFF+ETSALDS+NV  AF+ V++EIY+ +SRK + 
Sbjct: 124 GNKCDLESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYSNISRKQLN 183

Query: 186 SQELNKQ 193
           S    ++
Sbjct: 184 SDSYKEE 190

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BLAST of CmoCh13G004070 vs. ExPASy Swiss-Prot
Match: Q9SIP0 (Ras-related protein RABA5d OS=Arabidopsis thaliana OX=3702 GN=RABA5D PE=1 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 3.5e-68
Identity = 128/182 (70.33%), Postives = 156/182 (85.71%), Query Frame = 0


Query: 5   TEEEKTEDYLFKIVLVGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEINGKEIK 64
           +++E  E+YLFKIV++GDSAVGKSNLL+R+AR+EF  +SK+TIGVEFQTQ MEI GKE+K
Sbjct: 3   SDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQNMEIEGKEVK 62

Query: 65  AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124
           AQIWDTAGQERFRAVTSAYYRGAVGAL+VYDISRR TF+S+GRWL+EL THSD  V  +L
Sbjct: 63  AQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRSTFESVGRWLDELKTHSDTTVARML 122

Query: 125 VGNKSDLKDARDVSTSEGKSLAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILSRKVM 184
           VGNK DL+  R VS  EGK+LAE +GLFF+ETSALDS+NV  AF+ V+++IY  +SRK +
Sbjct: 123 VGNKCDLESIRAVSVEEGKALAETEGLFFMETSALDSTNVKTAFEMVIRDIYTNISRKQL 182

Query: 185 IS 187
            S
Sbjct: 183 NS 184

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BLAST of CmoCh13G004070 vs. ExPASy Swiss-Prot
Match: P19892 (Ras-related protein RABA5e OS=Arabidopsis thaliana OX=3702 GN=RABA5E PE=2 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 4.6e-68
Identity = 133/199 (66.83%), Postives = 163/199 (81.91%), Query Frame = 0


Query: 5   TEEEKTEDYLFKIVLVGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEINGKEIK 64
           +++E  E+YLFKIV++GDSAVGKSNLL+R+AR+EF  NSK+TIGVEFQTQ MEI GKE+K
Sbjct: 3   SDDEGREEYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVK 62

Query: 65  AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124
           AQIWDTAGQERFRAVTSAYYRGAVGAL+VYDI+RR TF+S+GRWL+EL  HSD  V  +L
Sbjct: 63  AQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARML 122

Query: 125 VGNKSDLKDARDVSTSEGKSLAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILSRKVM 184
           VGNK DL++ R VS  EGK+LAE +GLFF+ETSALDS+NV  AF+ V+ +IYN +SRK +
Sbjct: 123 VGNKCDLENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQL 182

Query: 185 IS----QELNKQDVSWMED 200
            S     EL    VS ++D
Sbjct: 183 NSDTYKDELTVNRVSLVKD 201

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BLAST of CmoCh13G004070 vs. ExPASy Swiss-Prot
Match: Q9SRS5 (Ras-related protein RABA5b OS=Arabidopsis thaliana OX=3702 GN=RABA5B PE=1 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 6.6e-67
Identity = 126/181 (69.61%), Postives = 155/181 (85.64%), Query Frame = 0


Query: 6   EEEKTEDYLFKIVLVGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEINGKEIKA 65
           E+++ E+YLFKIVL+GDSAVGKSNLL+RF+RDEF  NSK+TIGVEFQTQ +EI GKE+KA
Sbjct: 4   EDDRGEEYLFKIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIEGKEVKA 63

Query: 66  QIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILV 125
           QIWDTAGQERFRAVTSAYYRGA GAL+VYDI+R  TF+S+ RWL EL+TH D  V  +LV
Sbjct: 64  QIWDTAGQERFRAVTSAYYRGAFGALIVYDITRGDTFESVKRWLQELNTHCDTAVAQMLV 123

Query: 126 GNKSDLKDARDVSTSEGKSLAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILSRKVMI 185
           GNK DL+D R VS  EGK+LAE +GLFF+ETSALD++NV  AF+ V++EI+N +SRK++ 
Sbjct: 124 GNKCDLEDIRAVSVEEGKALAEEEGLFFMETSALDATNVDKAFEIVIREIFNNVSRKLLN 183

Query: 186 S 187
           S
Sbjct: 184 S 184

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BLAST of CmoCh13G004070 vs. ExPASy TrEMBL
Match: A0A6J1EHL1 (ras-related protein RABA5a-like OS=Cucurbita moschata OX=3662 GN=LOC111434244 PE=4 SV=1)

HSP 1 Score: 426.0 bits (1094), Expect = 1.0e-115
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0


Query: 1   MEEKTEEEKTEDYLFKIVLVGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEING 60
           MEEKTEEEKTEDYLFKIVLVGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEING
Sbjct: 1   MEEKTEEEKTEDYLFKIVLVGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEING 60

Query: 61  KEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
           KEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV
Sbjct: 61  KEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120

Query: 121 VTILVGNKSDLKDARDVSTSEGKSLAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILS 180
           VTILVGNKSDLKDARDVSTSEGKSLAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILS
Sbjct: 121 VTILVGNKSDLKDARDVSTSEGKSLAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILS 180

Query: 181 RKVMISQELNKQDVSWMEDGKTTVVIQGEEEQVVEEPKQG 221
           RKVMISQELNKQDVSWMEDGKTTVVIQGEEEQVVEEPKQG
Sbjct: 181 RKVMISQELNKQDVSWMEDGKTTVVIQGEEEQVVEEPKQG 220

[Close]

BLAST of CmoCh13G004070 vs. ExPASy TrEMBL
Match: A0A6J1KKX0 (ras-related protein RABA5a-like OS=Cucurbita maxima OX=3661 GN=LOC111495497 PE=4 SV=1)

HSP 1 Score: 423.7 bits (1088), Expect = 5.2e-115
Identity = 218/220 (99.09%), Postives = 220/220 (100.00%), Query Frame = 0


Query: 1   MEEKTEEEKTEDYLFKIVLVGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEING 60
           MEEKTEEEKTEDYLFKIVLVGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEING
Sbjct: 1   MEEKTEEEKTEDYLFKIVLVGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEING 60

Query: 61  KEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
           KEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV
Sbjct: 61  KEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120

Query: 121 VTILVGNKSDLKDARDVSTSEGKSLAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILS 180
           VTILVGNKSDLKDARDV+TSEGKSLAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILS
Sbjct: 121 VTILVGNKSDLKDARDVATSEGKSLAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILS 180

Query: 181 RKVMISQELNKQDVSWMEDGKTTVVIQGEEEQVVEEPKQG 221
           RKVMISQELNKQDVSWMEDGKTTVVIQGEE+QVVEEPKQG
Sbjct: 181 RKVMISQELNKQDVSWMEDGKTTVVIQGEEDQVVEEPKQG 220

[Close]

BLAST of CmoCh13G004070 vs. ExPASy TrEMBL
Match: A0A1S3CJN1 (LOW QUALITY PROTEIN: ras-related protein RABA5a OS=Cucumis melo OX=3656 GN=LOC103501722 PE=4 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 2.0e-106
Identity = 205/220 (93.18%), Postives = 212/220 (96.36%), Query Frame = 0


Query: 5   TEEEKTEDYLFKIVLVGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEINGKEIK 64
           +EEEKTEDYLFKIVL+GDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEINGKEIK
Sbjct: 5   SEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEINGKEIK 64

Query: 65  AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124
           AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL
Sbjct: 65  AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124

Query: 125 VGNKSDLKDARDVSTSEGKSLAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILSRKVM 184
           VGNKSDLKDAR+V T+EGKSLAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILSRKVM
Sbjct: 125 VGNKSDLKDAREVPTAEGKSLAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILSRKVM 184

Query: 185 ISQELNKQDVSWMEDGKTTVVIQGEEEQVVEEPKQGVTES 225
           ISQEL KQDVSWME+GKTTVVIQG E+QV  EPK+G   S
Sbjct: 185 ISQELKKQDVSWMENGKTTVVIQG-EDQVEGEPKKGCCSS 223

[Close]

BLAST of CmoCh13G004070 vs. ExPASy TrEMBL
Match: A0A5A7SYJ5 (Ras-related protein RABA5a OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G00940 PE=4 SV=1)

HSP 1 Score: 394.4 bits (1012), Expect = 3.4e-106
Identity = 204/216 (94.44%), Postives = 211/216 (97.69%), Query Frame = 0


Query: 5   TEEEKTEDYLFKIVLVGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEINGKEIK 64
           +EEEKTEDYLFKIVL+GDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEINGKEIK
Sbjct: 5   SEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEINGKEIK 64

Query: 65  AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124
           AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL
Sbjct: 65  AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124

Query: 125 VGNKSDLKDARDVSTSEGKSLAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILSRKVM 184
           VGNKSDLKDAR+V T+EGKSLAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILSRKVM
Sbjct: 125 VGNKSDLKDAREVPTAEGKSLAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILSRKVM 184

Query: 185 ISQELNKQDVSWMEDGKTTVVIQGEEEQVVEEPKQG 221
           ISQEL KQDVSWME+GKTTVVIQG E+QV  EPK+G
Sbjct: 185 ISQELKKQDVSWMENGKTTVVIQG-EDQVEGEPKKG 219

[Close]

BLAST of CmoCh13G004070 vs. ExPASy TrEMBL
Match: A0A6J1CL35 (ras-related protein RABA5a OS=Momordica charantia OX=3673 GN=LOC111012599 PE=4 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 9.7e-106
Identity = 202/215 (93.95%), Postives = 209/215 (97.21%), Query Frame = 0


Query: 5   TEEEKTEDYLFKIVLVGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEINGKEIK 64
           +EEEKTEDYLFKIVL+GDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQK+EINGKEIK
Sbjct: 5   SEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKIEINGKEIK 64

Query: 65  AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124
           AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL
Sbjct: 65  AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124

Query: 125 VGNKSDLKDARDVSTSEGKSLAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILSRKVM 184
           VGNKSDLKDAR+V TSEGK+LAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILSRKVM
Sbjct: 125 VGNKSDLKDAREVPTSEGKALAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILSRKVM 184

Query: 185 ISQELNKQDVSWMEDGKTTVVIQGEEEQVVEEPKQ 220
           ISQEL KQDVSWMEDGKTTVVIQGE+    EEPK+
Sbjct: 185 ISQELKKQDVSWMEDGKTTVVIQGEDIVSEEEPKK 219

[Close]

BLAST of CmoCh13G004070 vs. NCBI nr
Match: KAG6583740.1 (Ras-related protein RABA5a, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 426.8 bits (1096), Expect = 1.3e-115
Identity = 221/222 (99.55%), Postives = 221/222 (99.55%), Query Frame = 0


Query: 1   MEEKTEEEKTEDYLFKIVLVGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEING 60
           MEEKTEEEKTEDYLFKIVLVGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEING
Sbjct: 1   MEEKTEEEKTEDYLFKIVLVGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEING 60

Query: 61  KEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
           KEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV
Sbjct: 61  KEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120

Query: 121 VTILVGNKSDLKDARDVSTSEGKSLAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILS 180
           VTILVGNKSDLKDARDVSTSEGKSLAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILS
Sbjct: 121 VTILVGNKSDLKDARDVSTSEGKSLAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILS 180

Query: 181 RKVMISQELNKQDVSWMEDGKTTVVIQGEEEQVVEEPKQGVT 223
           RKVMISQELNKQDVSWMEDGKTTVVIQGEEEQVVEEPKQG T
Sbjct: 181 RKVMISQELNKQDVSWMEDGKTTVVIQGEEEQVVEEPKQGET 222

[Close]

BLAST of CmoCh13G004070 vs. NCBI nr
Match: XP_022927408.1 (ras-related protein RABA5a-like [Cucurbita moschata] >XP_022927409.1 ras-related protein RABA5a-like [Cucurbita moschata] >XP_022927410.1 ras-related protein RABA5a-like [Cucurbita moschata] >XP_022927411.1 ras-related protein RABA5a-like [Cucurbita moschata] >XP_023519710.1 ras-related protein RABA5a-like [Cucurbita pepo subsp. pepo] >XP_023519711.1 ras-related protein RABA5a-like [Cucurbita pepo subsp. pepo] >XP_023519712.1 ras-related protein RABA5a-like [Cucurbita pepo subsp. pepo] >XP_023519713.1 ras-related protein RABA5a-like [Cucurbita pepo subsp. pepo] >KAG7019377.1 Ras-related protein RABA5a [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 426.0 bits (1094), Expect = 2.1e-115
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0


Query: 1   MEEKTEEEKTEDYLFKIVLVGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEING 60
           MEEKTEEEKTEDYLFKIVLVGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEING
Sbjct: 1   MEEKTEEEKTEDYLFKIVLVGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEING 60

Query: 61  KEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
           KEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV
Sbjct: 61  KEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120

Query: 121 VTILVGNKSDLKDARDVSTSEGKSLAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILS 180
           VTILVGNKSDLKDARDVSTSEGKSLAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILS
Sbjct: 121 VTILVGNKSDLKDARDVSTSEGKSLAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILS 180

Query: 181 RKVMISQELNKQDVSWMEDGKTTVVIQGEEEQVVEEPKQG 221
           RKVMISQELNKQDVSWMEDGKTTVVIQGEEEQVVEEPKQG
Sbjct: 181 RKVMISQELNKQDVSWMEDGKTTVVIQGEEEQVVEEPKQG 220

[Close]

BLAST of CmoCh13G004070 vs. NCBI nr
Match: XP_023001334.1 (ras-related protein RABA5a-like [Cucurbita maxima] >XP_023001335.1 ras-related protein RABA5a-like [Cucurbita maxima] >XP_023001336.1 ras-related protein RABA5a-like [Cucurbita maxima] >XP_023001337.1 ras-related protein RABA5a-like [Cucurbita maxima])

HSP 1 Score: 423.7 bits (1088), Expect = 1.1e-114
Identity = 218/220 (99.09%), Postives = 220/220 (100.00%), Query Frame = 0


Query: 1   MEEKTEEEKTEDYLFKIVLVGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEING 60
           MEEKTEEEKTEDYLFKIVLVGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEING
Sbjct: 1   MEEKTEEEKTEDYLFKIVLVGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEING 60

Query: 61  KEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
           KEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV
Sbjct: 61  KEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120

Query: 121 VTILVGNKSDLKDARDVSTSEGKSLAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILS 180
           VTILVGNKSDLKDARDV+TSEGKSLAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILS
Sbjct: 121 VTILVGNKSDLKDARDVATSEGKSLAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILS 180

Query: 181 RKVMISQELNKQDVSWMEDGKTTVVIQGEEEQVVEEPKQG 221
           RKVMISQELNKQDVSWMEDGKTTVVIQGEE+QVVEEPKQG
Sbjct: 181 RKVMISQELNKQDVSWMEDGKTTVVIQGEEDQVVEEPKQG 220

[Close]

BLAST of CmoCh13G004070 vs. NCBI nr
Match: XP_038894138.1 (ras-related protein RABA5a [Benincasa hispida] >XP_038894139.1 ras-related protein RABA5a [Benincasa hispida])

HSP 1 Score: 396.7 bits (1018), Expect = 1.4e-106
Identity = 205/216 (94.91%), Postives = 212/216 (98.15%), Query Frame = 0


Query: 5   TEEEKTEDYLFKIVLVGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEINGKEIK 64
           +EEEKTEDYLFKIVL+GDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEINGKEIK
Sbjct: 5   SEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEINGKEIK 64

Query: 65  AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124
           AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL
Sbjct: 65  AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124

Query: 125 VGNKSDLKDARDVSTSEGKSLAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILSRKVM 184
           VGNKSDLKDAR+V T+EGKSLAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILSRKVM
Sbjct: 125 VGNKSDLKDAREVPTAEGKSLAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILSRKVM 184

Query: 185 ISQELNKQDVSWMEDGKTTVVIQGEEEQVVEEPKQG 221
           ISQELNKQDVSWME+GKTTVVIQG E+ V EEPK+G
Sbjct: 185 ISQELNKQDVSWMENGKTTVVIQG-EDLVEEEPKKG 219

[Close]

BLAST of CmoCh13G004070 vs. NCBI nr
Match: XP_008463615.1 (PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABA5a [Cucumis melo])

HSP 1 Score: 395.2 bits (1014), Expect = 4.1e-106
Identity = 205/220 (93.18%), Postives = 212/220 (96.36%), Query Frame = 0


Query: 5   TEEEKTEDYLFKIVLVGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEINGKEIK 64
           +EEEKTEDYLFKIVL+GDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEINGKEIK
Sbjct: 5   SEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEINGKEIK 64

Query: 65  AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124
           AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL
Sbjct: 65  AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124

Query: 125 VGNKSDLKDARDVSTSEGKSLAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILSRKVM 184
           VGNKSDLKDAR+V T+EGKSLAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILSRKVM
Sbjct: 125 VGNKSDLKDAREVPTAEGKSLAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILSRKVM 184

Query: 185 ISQELNKQDVSWMEDGKTTVVIQGEEEQVVEEPKQGVTES 225
           ISQEL KQDVSWME+GKTTVVIQG E+QV  EPK+G   S
Sbjct: 185 ISQELKKQDVSWMENGKTTVVIQG-EDQVEGEPKKGCCSS 223

[Close]

BLAST of CmoCh13G004070 vs. TAIR 10
Match: AT5G47520.1 (RAB GTPase homolog A5A )

HSP 1 Score: 347.1 bits (889), Expect = 1.2e-95
Identity = 176/201 (87.56%), Postives = 191/201 (95.02%), Query Frame = 0


Query: 5   TEEEKTEDYLFKIVLVGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEINGKEIK 64
           +E++K+EDYLFKIVL+GDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKM+INGKEIK
Sbjct: 5   SEDDKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEIK 64

Query: 65  AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124
           AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTF SIGRWLNELHTHSDMNVVTIL
Sbjct: 65  AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFHSIGRWLNELHTHSDMNVVTIL 124

Query: 125 VGNKSDLKDARDVSTSEGKSLAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILSRKVM 184
           VGNKSDLKD R+VST+EGK+LAEAQGLFF+ETSALDSSNV  AF+TVVKEIYNILSRKVM
Sbjct: 125 VGNKSDLKDLREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRKVM 184

Query: 185 ISQELNKQDVSWMEDGKTTVV 206
            SQELNKQD + + +GK  V+
Sbjct: 185 SSQELNKQDPASLSNGKKVVI 205

[Close]

BLAST of CmoCh13G004070 vs. TAIR 10
Match: AT2G43130.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 261.9 bits (668), Expect = 5.0e-70
Identity = 127/187 (67.91%), Postives = 160/187 (85.56%), Query Frame = 0


Query: 6   EEEKTEDYLFKIVLVGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEINGKEIKA 65
           ++E+ E+YLFKIV++GDSAVGKSNLL R+AR+EF PNSK+TIGVEFQTQ M I+GKE+KA
Sbjct: 4   DDERGEEYLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEVKA 63

Query: 66  QIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILV 125
           QIWDTAGQERFRAVTSAYYRGAVGAL+VYDI+R  TF+++GRWL+EL+THSD  V  +L+
Sbjct: 64  QIWDTAGQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKMLI 123

Query: 126 GNKSDLKDARDVSTSEGKSLAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILSRKVMI 185
           GNK DL+  R VS  EGKSLAE++GLFF+ETSALDS+NV  AF+ V++EIY+ +SRK + 
Sbjct: 124 GNKCDLESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYSNISRKQLN 183

Query: 186 SQELNKQ 193
           S    ++
Sbjct: 184 SDSYKEE 190

[Close]

BLAST of CmoCh13G004070 vs. TAIR 10
Match: AT2G31680.1 (RAB GTPase homolog A5D )

HSP 1 Score: 259.6 bits (662), Expect = 2.5e-69
Identity = 128/182 (70.33%), Postives = 156/182 (85.71%), Query Frame = 0


Query: 5   TEEEKTEDYLFKIVLVGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEINGKEIK 64
           +++E  E+YLFKIV++GDSAVGKSNLL+R+AR+EF  +SK+TIGVEFQTQ MEI GKE+K
Sbjct: 3   SDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQNMEIEGKEVK 62

Query: 65  AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124
           AQIWDTAGQERFRAVTSAYYRGAVGAL+VYDISRR TF+S+GRWL+EL THSD  V  +L
Sbjct: 63  AQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRSTFESVGRWLDELKTHSDTTVARML 122

Query: 125 VGNKSDLKDARDVSTSEGKSLAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILSRKVM 184
           VGNK DL+  R VS  EGK+LAE +GLFF+ETSALDS+NV  AF+ V+++IY  +SRK +
Sbjct: 123 VGNKCDLESIRAVSVEEGKALAETEGLFFMETSALDSTNVKTAFEMVIRDIYTNISRKQL 182

Query: 185 IS 187
            S
Sbjct: 183 NS 184

[Close]

BLAST of CmoCh13G004070 vs. TAIR 10
Match: AT1G05810.1 (RAB GTPase homolog A5E )

HSP 1 Score: 259.2 bits (661), Expect = 3.2e-69
Identity = 133/199 (66.83%), Postives = 163/199 (81.91%), Query Frame = 0


Query: 5   TEEEKTEDYLFKIVLVGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEINGKEIK 64
           +++E  E+YLFKIV++GDSAVGKSNLL+R+AR+EF  NSK+TIGVEFQTQ MEI GKE+K
Sbjct: 46  SDDEGREEYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVK 105

Query: 65  AQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTIL 124
           AQIWDTAGQERFRAVTSAYYRGAVGAL+VYDI+RR TF+S+GRWL+EL  HSD  V  +L
Sbjct: 106 AQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARML 165

Query: 125 VGNKSDLKDARDVSTSEGKSLAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILSRKVM 184
           VGNK DL++ R VS  EGK+LAE +GLFF+ETSALDS+NV  AF+ V+ +IYN +SRK +
Sbjct: 166 VGNKCDLENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQL 225

Query: 185 IS----QELNKQDVSWMED 200
            S     EL    VS ++D
Sbjct: 226 NSDTYKDELTVNRVSLVKD 244

[Close]

BLAST of CmoCh13G004070 vs. TAIR 10
Match: AT3G07410.1 (RAB GTPase homolog A5B )

HSP 1 Score: 255.4 bits (651), Expect = 4.7e-68
Identity = 126/181 (69.61%), Postives = 155/181 (85.64%), Query Frame = 0


Query: 6   EEEKTEDYLFKIVLVGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEINGKEIKA 65
           E+++ E+YLFKIVL+GDSAVGKSNLL+RF+RDEF  NSK+TIGVEFQTQ +EI GKE+KA
Sbjct: 4   EDDRGEEYLFKIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIEGKEVKA 63

Query: 66  QIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILV 125
           QIWDTAGQERFRAVTSAYYRGA GAL+VYDI+R  TF+S+ RWL EL+TH D  V  +LV
Sbjct: 64  QIWDTAGQERFRAVTSAYYRGAFGALIVYDITRGDTFESVKRWLQELNTHCDTAVAQMLV 123

Query: 126 GNKSDLKDARDVSTSEGKSLAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILSRKVMI 185
           GNK DL+D R VS  EGK+LAE +GLFF+ETSALD++NV  AF+ V++EI+N +SRK++ 
Sbjct: 124 GNKCDLEDIRAVSVEEGKALAEEEGLFFMETSALDATNVDKAFEIVIREIFNNVSRKLLN 183

Query: 186 S 187
           S
Sbjct: 184 S 184

The following BLAST results are available for this feature:

BLAST of CmoCh13G004070 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FGK5	1.7e-94	87.56	Ras-related protein RABA5a OS=Arabidopsis thaliana OX=3702 GN=RABA5A PE=1 SV=1	[more]
P28187	7.0e-69	67.91	Ras-related protein RABA5c OS=Arabidopsis thaliana OX=3702 GN=RABA5C PE=1 SV=1	[more]
Q9SIP0	3.5e-68	70.33	Ras-related protein RABA5d OS=Arabidopsis thaliana OX=3702 GN=RABA5D PE=1 SV=1	[more]
P19892	4.6e-68	66.83	Ras-related protein RABA5e OS=Arabidopsis thaliana OX=3702 GN=RABA5E PE=2 SV=1	[more]
Q9SRS5	6.6e-67	69.61	Ras-related protein RABA5b OS=Arabidopsis thaliana OX=3702 GN=RABA5B PE=1 SV=1	[more]

BLAST of CmoCh13G004070 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EHL1	1.0e-115	100.00	ras-related protein RABA5a-like OS=Cucurbita moschata OX=3662 GN=LOC111434244 PE...	[more]
A0A6J1KKX0	5.2e-115	99.09	ras-related protein RABA5a-like OS=Cucurbita maxima OX=3661 GN=LOC111495497 PE=4...	[more]
A0A1S3CJN1	2.0e-106	93.18	LOW QUALITY PROTEIN: ras-related protein RABA5a OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5A7SYJ5	3.4e-106	94.44	Ras-related protein RABA5a OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A6J1CL35	9.7e-106	93.95	ras-related protein RABA5a OS=Momordica charantia OX=3673 GN=LOC111012599 PE=4 S...	[more]

BLAST of CmoCh13G004070 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6583740.1	1.3e-115	99.55	Ras-related protein RABA5a, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022927408.1	2.1e-115	100.00	ras-related protein RABA5a-like [Cucurbita moschata] >XP_022927409.1 ras-related...	[more]
XP_023001334.1	1.1e-114	99.09	ras-related protein RABA5a-like [Cucurbita maxima] >XP_023001335.1 ras-related p...	[more]
XP_038894138.1	1.4e-106	94.91	ras-related protein RABA5a [Benincasa hispida] >XP_038894139.1 ras-related prote...	[more]
XP_008463615.1	4.1e-106	93.18	PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABA5a [Cucumis melo]	[more]

BLAST of CmoCh13G004070 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G47520.1	1.2e-95	87.56	RAB GTPase homolog A5A	[more]
AT2G43130.1	5.0e-70	67.91	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT2G31680.1	2.5e-69	70.33	RAB GTPase homolog A5D	[more]
AT1G05810.1	3.2e-69	66.83	RAB GTPase homolog A5E	[more]
AT3G07410.1	4.7e-68	69.61	RAB GTPase homolog A5B	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 15..36 score: 52.1 coord: 56..78 score: 52.79 coord: 153..175 score: 41.09 coord: 118..131 score: 54.33 coord: 38..54 score: 34.31
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 12..178 e-value: 1.1E-27 score: 108.0
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 15..178 e-value: 1.3E-104 score: 363.5
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 20..226 e-value: 4.1E-5 score: 23.5
None	No IPR available	PANTHER	PTHR47979	DRAB11-RELATED	coord: 1..220
None	No IPR available	PANTHER	PTHR47979:SF36	RAS-RELATED PROTEIN RABA5A	coord: 1..220
None	No IPR available	PROSITE	PS51420	RHO	coord: 8..184 score: 10.033432
None	No IPR available	PROSITE	PS51419	RAB	coord: 10..227 score: 34.336849
None	No IPR available	CDD	cd01868	Rab11_like	coord: 12..176 e-value: 1.4201E-111 score: 315.654
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 17..178 e-value: 4.0E-12 score: 35.5
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 16..176 e-value: 2.4E-60 score: 202.8
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 8..232 score: 17.819225
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 13..172 e-value: 1.1E-39 score: 133.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 2..220 e-value: 3.7E-68 score: 230.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 10..189

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh13G004070.1	CmoCh13G004070.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0012505	endomembrane system
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding