CmoCh13G003960 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh13G003960
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Pentatricopeptide repeat-containing protein
Location	Cmo_Chr13: 4968242 .. 4970347 (-)
RNA-Seq Expression	CmoCh13G003960
Synteny	CmoCh13G003960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTTCCAGCTCTCCCATTTTCCCTCCACCTTCTTCACCGACCATAATTCCCTCACTTTTCACTATAAAACAACTCTCTGCAAGTCCTTCTCTCGCGTTTTCAAGCTCAATCCTATACCTTATCACTCAAAACCATTCCTCCAAATTACCAATGTGTCGCAACAGGAATACGCTCCTCAAGAAACCCGGAATCCAAGCCCCTCTGATGATGAAATCTCGAAATTCCCAGATGGTAAATCCGGCTCCTCGTCCAAAACCTCCGTTTGGGTCAATCCCAGTAGCCCCAGAGCTTCGAAGCTTCGGAAGCAATCGTACGAAGCCAGGTATGCTTCTCTTAAGAAAATATCGGAGTCTTTGGACTCTTGTAATCCTTGTGAGGTTGATGTTGCCGATGTCTTGAAGAGGATAGATAGTAAAATTTTAGAGCAGGACGCTATTGGAGTGCTGAATAACATGTCGAATTCCCAAACTGCATTGCTTGTGCATCGGTACTTTCAGGATGTGTTGAAATCAAGTAAACAAGCGGTTTTTTATAATGTGACATTGAAGGTGTTTAGGAAATGCAGAGATTTTGAGGGTGCAGAGAAACTGTTCGACGAAATGCTTGAGAGAGGAGTTAAGCCTGATAATGTGACATTTTCTACAATTATTAGTTGTGCTAGGTTGTGTTCATTGCCAAATAAGGCTGTTGAGTGGTTTGAGAAGATGCCAAGTTTTGACTGTAATCCTGATAATATCACCTACTCTGGGATGATTGATGCCTATGGACGTGCTGGTAATGTGGACATGGCTTTCAGCTTGTATGACCGTGCAAGAACAGAAAACTGGCGTATCGATCTTTCGACATTCTCAACGATGATCAAAATTCATGGAGTGGCTGGGAACTATGATGGGTGCTTGAATGTGTATGAAGAAATGAAGGCTGTAGGCATCAAGCCGAACTTGGCTATATATAACAGCTTGCTGGCTGCTATGGGTAGGGCTAAAAGACCCTGGCAGATCAAGACAATTTACAAAGAGATGACTAAGAATGGATTTTCACCAAGTTGGGCAACTTATGCTTCTCTTTTACGTGCCTATGCAAGAGCCAGATATGCTGAGGATGGCATGCTTGTGTACAAGGAGATGAAGGAAAAGGGACTGCAGTTGAATGTAATTCTCTACAATACGCTTTTAGCTATGTGTGCCGATGTTGGCTATGTTAATGAGGCTATTGAAGTTTTTAAAGATATGAAGAGTTCTGGGACTTGCTCACCTGACAGTTGGACTTTTTCTTCCATGATCACCATATATTCCTGCAGTGGAAACGTATCAGAGGCAGAAGAAATGTTGAACGAGATGATGGAAGCCGGTTTCGACCCTAATATCTTTGTCTTGACATCATTAATCCAGTGTTATGGGAAAGCCAAACGTGTTGATGATGTAGTGAGGACATTTGATCGATTGCTAGAGTTGGGATTAACTCCAGACGACCGATTCTGTGGCTGTCTTCTCAATGTAATTACCCAGACGCCGAAACATGAACTTAGTAAGCTAATAGATTGTGTCGAGAGAGCTAATCCAAAACTTGGTTTCGTGGTGAAACTCTTGCTAGGGGAGAAGGACATGGAAGGAGATTTCAGAACTGAAGCCTCGGAACTCTTTAGTGTTGTGAGCGACGATGTGAGAAAAGCCTACTGCAATTGCTTGATTGATCTGTGTGTAAATTTAGATCTTTTGGATAAGGCATGTGAGCTGCTGGATTTGGGGCTTTCGGTTCAGATATATACAGATTTACAGTCAAGGTCTCCAACTCAGTGGTCTCTATATCTTAAGGGTCTTTCTCTTGGGGCTGCTCTCACTGCATTACACGTTTGGATTAATGACTTAACAAAGGAACTGAAATCCGGGGAGGAACTTCCACCATTACTTGGAATAAATACTGGACATGGAAAACACAAATATTCCGATAAGGGTTTGTCGAGCGTCTTTGAATCGCATCTGAAGGAACTAAATGCTCCATTCCATGAGGCTCCAGAAAAGGTTGGTTGGTTTTTGACGACTAAAGTGGCAGCAAAATCATGGTTGGAGTCTAGAGGTTCACCTGAATTAGTGGCAGCATAG

mRNA sequence

ATGGCGTTCCAGCTCTCCCATTTTCCCTCCACCTTCTTCACCGACCATAATTCCCTCACTTTTCACTATAAAACAACTCTCTGCAAGTCCTTCTCTCGCGTTTTCAAGCTCAATCCTATACCTTATCACTCAAAACCATTCCTCCAAATTACCAATGTGTCGCAACAGGAATACGCTCCTCAAGAAACCCGGAATCCAAGCCCCTCTGATGATGAAATCTCGAAATTCCCAGATGGTAAATCCGGCTCCTCGTCCAAAACCTCCGTTTGGGTCAATCCCAGTAGCCCCAGAGCTTCGAAGCTTCGGAAGCAATCGTACGAAGCCAGGTATGCTTCTCTTAAGAAAATATCGGAGTCTTTGGACTCTTGTAATCCTTGTGAGGTTGATGTTGCCGATGTCTTGAAGAGGATAGATAGTAAAATTTTAGAGCAGGACGCTATTGGAGTGCTGAATAACATGTCGAATTCCCAAACTGCATTGCTTGTGCATCGGTACTTTCAGGATGTGTTGAAATCAAGTAAACAAGCGGTTTTTTATAATGTGACATTGAAGGTGTTTAGGAAATGCAGAGATTTTGAGGGTGCAGAGAAACTGTTCGACGAAATGCTTGAGAGAGGAGTTAAGCCTGATAATGTGACATTTTCTACAATTATTAGTTGTGCTAGGTTGTGTTCATTGCCAAATAAGGCTGTTGAGTGGTTTGAGAAGATGCCAAGTTTTGACTGTAATCCTGATAATATCACCTACTCTGGGATGATTGATGCCTATGGACGTGCTGGTAATGTGGACATGGCTTTCAGCTTGTATGACCGTGCAAGAACAGAAAACTGGCGTATCGATCTTTCGACATTCTCAACGATGATCAAAATTCATGGAGTGGCTGGGAACTATGATGGGTGCTTGAATGTGTATGAAGAAATGAAGGCTGTAGGCATCAAGCCGAACTTGGCTATATATAACAGCTTGCTGGCTGCTATGGGTAGGGCTAAAAGACCCTGGCAGATCAAGACAATTTACAAAGAGATGACTAAGAATGGATTTTCACCAAGTTGGGCAACTTATGCTTCTCTTTTACGTGCCTATGCAAGAGCCAGATATGCTGAGGATGGCATGCTTGTGTACAAGGAGATGAAGGAAAAGGGACTGCAGTTGAATGTAATTCTCTACAATACGCTTTTAGCTATGTGTGCCGATGTTGGCTATGTTAATGAGGCTATTGAAGTTTTTAAAGATATGAAGAGTTCTGGGACTTGCTCACCTGACAGTTGGACTTTTTCTTCCATGATCACCATATATTCCTGCAGTGGAAACGTATCAGAGGCAGAAGAAATGTTGAACGAGATGATGGAAGCCGGTTTCGACCCTAATATCTTTGTCTTGACATCATTAATCCAGTGTTATGGGAAAGCCAAACGTGTTGATGATGTAGTGAGGACATTTGATCGATTGCTAGAGTTGGGATTAACTCCAGACGACCGATTCTGTGGCTGTCTTCTCAATGTAATTACCCAGACGCCGAAACATGAACTTAGTAAGCTAATAGATTGTGTCGAGAGAGCTAATCCAAAACTTGGTTTCGTGGTGAAACTCTTGCTAGGGGAGAAGGACATGGAAGGAGATTTCAGAACTGAAGCCTCGGAACTCTTTAGTGTTGTGAGCGACGATGTGAGAAAAGCCTACTGCAATTGCTTGATTGATCTGTGTGTAAATTTAGATCTTTTGGATAAGGCATGTGAGCTGCTGGATTTGGGGCTTTCGGTTCAGATATATACAGATTTACAGTCAAGGTCTCCAACTCAGTGGTCTCTATATCTTAAGGGTCTTTCTCTTGGGGCTGCTCTCACTGCATTACACGTTTGGATTAATGACTTAACAAAGGAACTGAAATCCGGGGAGGAACTTCCACCATTACTTGGAATAAATACTGGACATGGAAAACACAAATATTCCGATAAGGGTTTGTCGAGCGTCTTTGAATCGCATCTGAAGGAACTAAATGCTCCATTCCATGAGGCTCCAGAAAAGGTTGGTTGGTTTTTGACGACTAAAGTGGCAGCAAAATCATGGTTGGAGTCTAGAGGTTCACCTGAATTAGTGGCAGCATAG

Coding sequence (CDS)

ATGGCGTTCCAGCTCTCCCATTTTCCCTCCACCTTCTTCACCGACCATAATTCCCTCACTTTTCACTATAAAACAACTCTCTGCAAGTCCTTCTCTCGCGTTTTCAAGCTCAATCCTATACCTTATCACTCAAAACCATTCCTCCAAATTACCAATGTGTCGCAACAGGAATACGCTCCTCAAGAAACCCGGAATCCAAGCCCCTCTGATGATGAAATCTCGAAATTCCCAGATGGTAAATCCGGCTCCTCGTCCAAAACCTCCGTTTGGGTCAATCCCAGTAGCCCCAGAGCTTCGAAGCTTCGGAAGCAATCGTACGAAGCCAGGTATGCTTCTCTTAAGAAAATATCGGAGTCTTTGGACTCTTGTAATCCTTGTGAGGTTGATGTTGCCGATGTCTTGAAGAGGATAGATAGTAAAATTTTAGAGCAGGACGCTATTGGAGTGCTGAATAACATGTCGAATTCCCAAACTGCATTGCTTGTGCATCGGTACTTTCAGGATGTGTTGAAATCAAGTAAACAAGCGGTTTTTTATAATGTGACATTGAAGGTGTTTAGGAAATGCAGAGATTTTGAGGGTGCAGAGAAACTGTTCGACGAAATGCTTGAGAGAGGAGTTAAGCCTGATAATGTGACATTTTCTACAATTATTAGTTGTGCTAGGTTGTGTTCATTGCCAAATAAGGCTGTTGAGTGGTTTGAGAAGATGCCAAGTTTTGACTGTAATCCTGATAATATCACCTACTCTGGGATGATTGATGCCTATGGACGTGCTGGTAATGTGGACATGGCTTTCAGCTTGTATGACCGTGCAAGAACAGAAAACTGGCGTATCGATCTTTCGACATTCTCAACGATGATCAAAATTCATGGAGTGGCTGGGAACTATGATGGGTGCTTGAATGTGTATGAAGAAATGAAGGCTGTAGGCATCAAGCCGAACTTGGCTATATATAACAGCTTGCTGGCTGCTATGGGTAGGGCTAAAAGACCCTGGCAGATCAAGACAATTTACAAAGAGATGACTAAGAATGGATTTTCACCAAGTTGGGCAACTTATGCTTCTCTTTTACGTGCCTATGCAAGAGCCAGATATGCTGAGGATGGCATGCTTGTGTACAAGGAGATGAAGGAAAAGGGACTGCAGTTGAATGTAATTCTCTACAATACGCTTTTAGCTATGTGTGCCGATGTTGGCTATGTTAATGAGGCTATTGAAGTTTTTAAAGATATGAAGAGTTCTGGGACTTGCTCACCTGACAGTTGGACTTTTTCTTCCATGATCACCATATATTCCTGCAGTGGAAACGTATCAGAGGCAGAAGAAATGTTGAACGAGATGATGGAAGCCGGTTTCGACCCTAATATCTTTGTCTTGACATCATTAATCCAGTGTTATGGGAAAGCCAAACGTGTTGATGATGTAGTGAGGACATTTGATCGATTGCTAGAGTTGGGATTAACTCCAGACGACCGATTCTGTGGCTGTCTTCTCAATGTAATTACCCAGACGCCGAAACATGAACTTAGTAAGCTAATAGATTGTGTCGAGAGAGCTAATCCAAAACTTGGTTTCGTGGTGAAACTCTTGCTAGGGGAGAAGGACATGGAAGGAGATTTCAGAACTGAAGCCTCGGAACTCTTTAGTGTTGTGAGCGACGATGTGAGAAAAGCCTACTGCAATTGCTTGATTGATCTGTGTGTAAATTTAGATCTTTTGGATAAGGCATGTGAGCTGCTGGATTTGGGGCTTTCGGTTCAGATATATACAGATTTACAGTCAAGGTCTCCAACTCAGTGGTCTCTATATCTTAAGGGTCTTTCTCTTGGGGCTGCTCTCACTGCATTACACGTTTGGATTAATGACTTAACAAAGGAACTGAAATCCGGGGAGGAACTTCCACCATTACTTGGAATAAATACTGGACATGGAAAACACAAATATTCCGATAAGGGTTTGTCGAGCGTCTTTGAATCGCATCTGAAGGAACTAAATGCTCCATTCCATGAGGCTCCAGAAAAGGTTGGTTGGTTTTTGACGACTAAAGTGGCAGCAAAATCATGGTTGGAGTCTAGAGGTTCACCTGAATTAGTGGCAGCATAG

Protein sequence

MAFQLSHFPSTFFTDHNSLTFHYKTTLCKSFSRVFKLNPIPYHSKPFLQITNVSQQEYAPQETRNPSPSDDEISKFPDGKSGSSSKTSVWVNPSSPRASKLRKQSYEARYASLKKISESLDSCNPCEVDVADVLKRIDSKILEQDAIGVLNNMSNSQTALLVHRYFQDVLKSSKQAVFYNVTLKVFRKCRDFEGAEKLFDEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEKMPSFDCNPDNITYSGMIDAYGRAGNVDMAFSLYDRARTENWRIDLSTFSTMIKIHGVAGNYDGCLNVYEEMKAVGIKPNLAIYNSLLAAMGRAKRPWQIKTIYKEMTKNGFSPSWATYASLLRAYARARYAEDGMLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAIEVFKDMKSSGTCSPDSWTFSSMITIYSCSGNVSEAEEMLNEMMEAGFDPNIFVLTSLIQCYGKAKRVDDVVRTFDRLLELGLTPDDRFCGCLLNVITQTPKHELSKLIDCVERANPKLGFVVKLLLGEKDMEGDFRTEASELFSVVSDDVRKAYCNCLIDLCVNLDLLDKACELLDLGLSVQIYTDLQSRSPTQWSLYLKGLSLGAALTALHVWINDLTKELKSGEELPPLLGINTGHGKHKYSDKGLSSVFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRGSPELVAA

Homology

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BLAST of CmoCh13G003960 vs. ExPASy Swiss-Prot
Match: Q8GWE0 (Pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=P67 PE=1 SV=3)

HSP 1 Score: 911.8 bits (2355), Expect = 4.9e-264
Identity = 448/687 (65.21%), Postives = 550/687 (80.06%), Query Frame = 0


Query: 17  NSLTFHYKTTLCKSFSRVFKLNPIPYHSKPFLQITNVSQQEYAPQETRNPSPSDDEISKF 76
           N L+ + K+T  +SF   +  N   +HS+  LQ T+VS QE  PQ  ++     D     
Sbjct: 22  NLLSVYPKST-PRSFLSSYNPNSSHFHSRNLLQATHVSVQEAIPQSEKSKLVDVDLPIPE 81

Query: 77  PDGKSGSSSKTSVWVNPSSPRASKLRKQSYEARYASLKKISESLDSCNPCEVDVADVLKR 136
           P     ++SK+ VWVNP SPRAS+LR++SY++RY+SL K++ESLD+C P E DV DV+  
Sbjct: 82  P-----TASKSYVWVNPKSPRASQLRRKSYDSRYSSLIKLAESLDACKPNEADVCDVITG 141

Query: 137 IDSKILEQDAIGVLNNMSNSQTALLVHRYFQDVLKSSKQAVFYNVTLKVFRKCRDFEGAE 196
              K+ EQDA+  LNNM+N +TA LV     + +K S++ + YNVT+KVFRK +D E +E
Sbjct: 142 FGGKLFEQDAVVTLNNMTNPETAPLVLNNLLETMKPSREVILYNVTMKVFRKSKDLEKSE 201

Query: 197 KLFDEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEKMPSFDCNPDNITYSGMIDAY 256
           KLFDEMLERG+KPDN TF+TIISCAR   +P +AVEWFEKM SF C PDN+T + MIDAY
Sbjct: 202 KLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAY 261

Query: 257 GRAGNVDMAFSLYDRARTENWRIDLSTFSTMIKIHGVAGNYDGCLNVYEEMKAVGIKPNL 316
           GRAGNVDMA SLYDRARTE WRID  TFST+I+I+GV+GNYDGCLN+YEEMKA+G+KPNL
Sbjct: 262 GRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNL 321

Query: 317 AIYNSLLAAMGRAKRPWQIKTIYKEMTKNGFSPSWATYASLLRAYARARYAEDGMLVYKE 376
            IYN L+ +MGRAKRPWQ K IYK++  NGF+P+W+TYA+L+RAY RARY +D + +Y+E
Sbjct: 322 VIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYRE 381

Query: 377 MKEKGLQLNVILYNTLLAMCADVGYVNEAIEVFKDMKSSGTCSPDSWTFSSMITIYSCSG 436
           MKEKGL L VILYNTLL+MCAD  YV+EA E+F+DMK+  TC PDSWTFSS+IT+Y+CSG
Sbjct: 382 MKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSG 441

Query: 437 NVSEAEEMLNEMMEAGFDPNIFVLTSLIQCYGKAKRVDDVVRTFDRLLELGLTPDDRFCG 496
            VSEAE  L +M EAGF+P +FVLTS+IQCYGKAK+VDDVVRTFD++LELG+TPDDRFCG
Sbjct: 442 RVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPDDRFCG 501

Query: 497 CLLNVITQTPKHELSKLIDCVERANPKLGFVVKLLLGEKDM-EGDFRTEASELFSVVSDD 556
           CLLNV+TQTP  E+ KLI CVE+A PKLG VVK+L+ E++  EG F+ EASEL   +  D
Sbjct: 502 CLLNVMTQTPSEEIGKLIGCVEKAKPKLGQVVKMLVEEQNCEEGVFKKEASELIDSIGSD 561

Query: 557 VRKAYCNCLIDLCVNLDLLDKACELLDLGLSVQIYTDLQSRSPTQWSLYLKGLSLGAALT 616
           V+KAY NCLIDLCVNL+ L++ACE+L LGL   IYT LQS+S TQWSL+LK LSLGAALT
Sbjct: 562 VKKAYLNCLIDLCVNLNKLERACEILQLGLEYDIYTGLQSKSATQWSLHLKSLSLGAALT 621

Query: 617 ALHVWINDLTK-ELKSGEELPPLLGINTGHGKHKYSDKGLSSVFESHLKELNAPFHEAPE 676
           ALHVW+NDL++  L+SGEE PPLLGINTGHGKHKYSDKGL++VFESHLKELNAPFHEAP+
Sbjct: 622 ALHVWMNDLSEAALESGEEFPPLLGINTGHGKHKYSDKGLAAVFESHLKELNAPFHEAPD 681

Query: 677 KVGWFLTTKVAAKSWLESRGSPELVAA 702
           KVGWFLTT VAAK+WLESR S   V+A
Sbjct: 682 KVGWFLTTSVAAKAWLESRRSAGGVSA 702

[Close]

BLAST of CmoCh13G003960 vs. ExPASy Swiss-Prot
Match: B4F8Z1 (Pentatricopeptide repeat-containing protein ATP4, chloroplastic OS=Zea mays OX=4577 GN=ATP4 PE=2 SV=1)

HSP 1 Score: 702.2 bits (1811), Expect = 5.9e-201
Identity = 361/657 (54.95%), Postives = 468/657 (71.23%), Query Frame = 0


Query: 52  NVSQQEYAPQETRNPSPSDDEISKFPDGKSGSSSKTS--VWVNPSSPRASKL-RKQSYEA 111
           +VS QE  PQ  ++PSP  D     P+G   SSS  +  +WVNP+SPRA+ + R ++   
Sbjct: 38  HVSVQETPPQ-PQDPSPPSD---SNPNGTRPSSSSNTRFLWVNPNSPRAADVARARAGSG 97

Query: 112 RYASLKKISESLDSCNPCEVDVADVLK-RIDSKILEQDAIGVLNN--MSNSQTALLVHRY 171
           R A L   + +L +C   E  V   L+        EQDA+ VLN    + ++TA+L  R+
Sbjct: 98  RRARLASAAAALGACETTESAVEAALQAAFPEPPSEQDAVIVLNTAAATRAETAVLALRW 157

Query: 172 FQDVLKSSKQAVFYNVTLKVFRKCRDFEGAEKLFDEMLERGVKPDNVTFSTIISCARLCS 231
           F    K  K+ + YNV LK+ RK R +   E L+ EML  GV+PDN TFST+ISCAR C 
Sbjct: 158 FLGNAKVRKKVILYNVVLKLLRKKRLWSETEALWAEMLRDGVQPDNATFSTVISCARACG 217

Query: 232 LPNKAVEWFEKMPSFDCNPDNITYSGMIDAYGRAGNVDMAFSLYDRARTENWRIDLSTFS 291
           L +KAVEWF+KMP F C+PD +TYS +IDAYG AGN + A  LYDRAR E W++D    S
Sbjct: 218 LHSKAVEWFDKMPEFGCSPDMLTYSAVIDAYGHAGNSEAALRLYDRARAEKWQLDPVICS 277

Query: 292 TMIKIHGVAGNYDGCLNVYEEMKAVGIKPNLAIYNSLLAAMGRAKRPWQIKTIYKEMTKN 351
           T+IK+H  +GN+DG LNV+EEMKA+G++PNL +YN++L AMGRA RPW +KTI++EM   
Sbjct: 278 TVIKVHSTSGNFDGALNVFEEMKAIGVRPNLVVYNTMLDAMGRALRPWVVKTIHREMVDQ 337

Query: 352 GFSPSWATYASLLRAYARARYAEDGMLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEA 411
              PS ATY  LL AY RARY ED M VY+ MK++ + ++V+LYN LL+MCAD+GYV+EA
Sbjct: 338 QVQPSRATYCCLLHAYTRARYGEDAMAVYRLMKDEAMGIDVMLYNMLLSMCADIGYVDEA 397

Query: 412 IEVFKDMKSS--GTCSPDSWTFSSMITIYSCSGNVSEAEEMLNEMMEAGFDPNIFVLTSL 471
            E+F+DMK+S      PDSW++SSM+T+YS + NV  AE +LNEM+EAGF PNIFVLTSL
Sbjct: 398 EEIFRDMKASMGAHSKPDSWSYSSMVTLYSSTANVLSAEGILNEMVEAGFKPNIFVLTSL 457

Query: 472 IQCYGKAKRVDDVVRTFDRLLELGLTPDDRFCGCLLNVITQTPKHELSKLIDCVERANPK 531
           I+CYGK  R DDVVR+F  L +LG+ PDDRFCGCLL+V   TP  EL K+I C+ER+N +
Sbjct: 458 IRCYGKVGRTDDVVRSFGMLQDLGIIPDDRFCGCLLSVAANTPAEELGKVISCIERSNVQ 517

Query: 532 LGFVVKLLLGEKDMEGDFRTEASELFSVVSDDVRKAYCNCLIDLCVNLDLLDKACELLDL 591
           LG VVKLL+     E  FR  A EL       V+  YCNCL+DLCVNL+ ++KAC LLD 
Sbjct: 518 LGAVVKLLVDRSSSE-SFREAARELLRSSRGVVKMPYCNCLMDLCVNLNQMEKACALLDA 577

Query: 592 GLSVQIYTDLQSRSPTQWSLYLKGLSLGAALTALHVWINDLTKELKSGEE-LPPLLGINT 651
              + IY ++Q+R+ TQWSL+L+GLS+GAALT LHVW+NDL   L++G E LPPLLGI+T
Sbjct: 578 AQQLGIYANIQTRTQTQWSLHLRGLSVGAALTTLHVWMNDLYTSLQTGNEGLPPLLGIHT 637

Query: 652 GHGKHKYSDKGLSSVFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRGSPELV 700
           G GK+ YSD+GL+++FE+HLKEL+APFHEAP+K GWFLTT VAAK WLES+ + ELV
Sbjct: 638 GQGKNTYSDRGLAAMFEAHLKELDAPFHEAPDKAGWFLTTNVAAKQWLESKAASELV 689

[Close]

BLAST of CmoCh13G003960 vs. ExPASy Swiss-Prot
Match: Q10PZ4 (Pentatricopeptide repeat-containing protein ATP4 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0215900 PE=3 SV=1)

HSP 1 Score: 701.8 bits (1810), Expect = 7.7e-201
Identity = 361/674 (53.56%), Postives = 472/674 (70.03%), Query Frame = 0


Query: 33  RVFKLNPIPYHSKPFLQITNVSQQEYAPQET-RNPSPSDDEISKFPDGKSGSSSKTSVWV 92
           R   L+  P +  P      VS Q+  P  +  NPSP          G+S ++S+  VWV
Sbjct: 13  RAISLSFQPKNPSPSPATARVSVQDPPPPPSDANPSP----------GRSSNTSR-YVWV 72

Query: 93  NPSSPRASKL-RKQSYEARYASLKKISESLDSCNPCEVDVADVLK-RIDSKILEQDAIGV 152
           NP+SPRA+ L R ++   R A L   + +L +C   E  VA  L+        EQDA+ V
Sbjct: 73  NPNSPRAAGLARARAGSGRRARLAAAAAALAACEAGEAPVAAALEAAFPEPPSEQDAVIV 132

Query: 153 LNNMSNSQTA-LLVHRYFQDVLKSSKQAVFYNVTLKVFRKCRDFEGAEKLFDEMLERGVK 212
           LN  S    A +L   +F    +  K+ + YNV LK  RK R +  AE L++EML  GV+
Sbjct: 133 LNTTSARPAAVVLALWWFLRNAEVRKEVILYNVALKALRKRRRWSDAEALWEEMLREGVQ 192

Query: 213 PDNVTFSTIISCARLCSLPNKAVEWFEKMPSFDCNPDNITYSGMIDAYGRAGNVDMAFSL 272
           PDN TFST+ISCAR C +P KAVEWFEKMP F C+PD +TYS +IDAYGRAG+ + A  L
Sbjct: 193 PDNATFSTVISCARACGMPGKAVEWFEKMPDFGCSPDMLTYSAVIDAYGRAGDAETALRL 252

Query: 273 YDRARTENWRIDLSTFSTMIKIHGVAGNYDGCLNVYEEMKAVGIKPNLAIYNSLLAAMGR 332
           YDRAR E W++D    +T+I++H  +GN+DG LNV+EEMKA G+KPNL +YN++L AMGR
Sbjct: 253 YDRARAEKWQLDPVICATVIRVHSSSGNFDGALNVFEEMKAAGVKPNLVVYNTVLDAMGR 312

Query: 333 AKRPWQIKTIYKEMTKNGFSPSWATYASLLRAYARARYAEDGMLVYKEMKEKGLQLNVIL 392
           A RPW +KTI++E+      P+ ATY  LL AY RARY ED M VY+ MK++ + ++V+L
Sbjct: 313 AMRPWVVKTIHRELVSQEAVPNKATYCCLLHAYTRARYGEDAMAVYRVMKDEVMDIDVVL 372

Query: 393 YNTLLAMCADVGYVNEAIEVFKDMKSS--GTCSPDSWTFSSMITIYSCSGNVSEAEEMLN 452
           YN LL+MCAD+GYV EA E+F+DMK+S      PDSW++SSM+T+YSC+GNV+ AE +LN
Sbjct: 373 YNMLLSMCADIGYVEEAEEIFRDMKASMDSRSKPDSWSYSSMVTLYSCTGNVAGAEGILN 432

Query: 453 EMMEAGFDPNIFVLTSLIQCYGKAKRVDDVVRTFDRLLELGLTPDDRFCGCLLNVITQTP 512
           EM+EAGF PNIF+LTSLI+CYGKA R DDVVR+F  L +LG+TPDDRFCGCLL V   TP
Sbjct: 433 EMVEAGFKPNIFILTSLIRCYGKAGRTDDVVRSFAMLEDLGITPDDRFCGCLLTVAAGTP 492

Query: 513 KHELSKLIDCVERANPKLGFVVKLLLGEKDMEGDFRTEASELFSVVSDDVRKAYCNCLID 572
             EL K+I C++R++ +LG VV+LL+         R  A EL       VR  YCNCL+D
Sbjct: 493 ADELGKVIGCIDRSSAQLGAVVRLLVDAAAPSEPLREAAGELLGGARGVVRMPYCNCLMD 552

Query: 573 LCVNLDLLDKACELLDLGLSVQIYTDLQSRSPTQWSLYLKGLSLGAALTALHVWINDLTK 632
           L VNL  ++KAC LLD+ L + IY+++Q+R+ TQWSL+L+GLS+GAALT LHVW++DL  
Sbjct: 553 LAVNLSQMEKACALLDVALRLGIYSNVQTRTQTQWSLHLRGLSVGAALTTLHVWMSDLYA 612

Query: 633 ELKSGEELPPLLGINTGHGKHKYSDKGLSSVFESHLKELNAPFHEAPEKVGWFLTTKVAA 692
            L++G+ELPPLLGI+TG GK+ YS KGL++VFESHLKEL+APFHEAP+K GWFLTT VAA
Sbjct: 613 ALQAGDELPPLLGIHTGQGKNTYSYKGLATVFESHLKELDAPFHEAPDKAGWFLTTSVAA 672

Query: 693 KSWLESRGSPELVA 701
           + WLE++ S ELVA
Sbjct: 673 RHWLETKKSAELVA 675

[Close]

BLAST of CmoCh13G003960 vs. ExPASy Swiss-Prot
Match: Q9LS25 (Pentatricopeptide repeat-containing protein At5g46580, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g46580 PE=2 SV=1)

HSP 1 Score: 458.8 bits (1179), Expect = 1.1e-127
Identity = 250/625 (40.00%), Postives = 376/625 (60.16%), Query Frame = 0


Query: 84  SSKTSVWVNPSSPRASKLRKQ-------SYEARYASLKKISESLDSCNPCE-VDVADVLK 143
           S   SVWVNP+ P+ S L  Q       SY  +   L+  +  L+S    E  +   +L 
Sbjct: 86  SKPKSVWVNPTRPKRSVLSLQRQKRSAYSYNPQIKDLRAFALKLNSSIFTEKSEFLSLLD 145

Query: 144 RIDSKILEQDAIGVLNNMSNSQTALLVHRYFQDVLKSS---KQAVFYNVTLKVFRKCRDF 203
            I       +A+ VLN++   Q     H +F  V   S    + +FYNVT+K  R  R F
Sbjct: 146 EIPHPPNRDNALLVLNSLREWQK---THTFFNWVKSKSLFPMETIFYNVTMKSLRFGRQF 205

Query: 204 EGAEKLFDEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEKMPSFDCNPDNITYSGM 263
           +  E++  EM++ GV+ DN+T+STII+CA+ C+L NKA+EWFE+M      PD +TYS +
Sbjct: 206 QLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAI 265

Query: 264 IDAYGRAGNVDMAFSLYDRARTENWRIDLSTFSTMIKIHGVAGNYDGCLNVYEEMKAVGI 323
           +D Y ++G V+   SLY+RA    W+ D   FS + K+ G AG+YDG   V +EMK++ +
Sbjct: 266 LDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDV 325

Query: 324 KPNLAIYNSLLAAMGRAKRPWQIKTIYKEMTKNGFSPSWATYASLLRAYARARYAEDGML 383
           KPN+ +YN+LL AMGRA +P   ++++ EM + G +P+  T  +L++ Y +AR+A D + 
Sbjct: 326 KPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQ 385

Query: 384 VYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAIEVFKDMKSSGTCSPDSWTFSSMITIY 443
           +++EMK K   ++ ILYNTLL MCAD+G   EA  +F DMK S  C PD++++++M+ IY
Sbjct: 386 LWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIY 445

Query: 444 SCSGNVSEAEEMLNEMMEAGFDPNIFVLTSLIQCYGKAKRVDDVVRTFDRLLELGLTPDD 503
              G   +A E+  EM++AG   N+   T L+QC GKAKR+DDVV  FD  ++ G+ PDD
Sbjct: 446 GSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDD 505

Query: 504 RFCGCLLNVITQTPKHE-LSKLIDCVERANPKLGFVVKLLLGEKDMEGDFRTEASELFSV 563
           R CGCLL+V+      E   K++ C+ERAN KL   V L++ EK      + E   + + 
Sbjct: 506 RLCGCLLSVMALCESSEDAEKVMACLERANKKLVTFVNLIVDEKTEYETVKEEFKLVINA 565

Query: 564 VSDDVRKAYCNCLIDLCVNLDLLDKACELLDLGLSVQIYTDLQSRSPTQWSLYLKGLSLG 623
              + R+ +CNCLID+C   +  ++A ELL LG    +Y  L +++  +WSL ++ LS+G
Sbjct: 566 TQVEARRPFCNCLIDICRGNNRHERAHELLYLGTLFGLYPGLHNKTIKEWSLDVRSLSVG 625

Query: 624 AALTALHVWINDLTKELKSGEELPPLLGINTGHGKHKYSDKGLSSVFESHLKELNAPFHE 683
           AA TAL  W+  L   +K  EELP L    TG G H++S +GL++ F  HL++L+APF +
Sbjct: 626 AAETALEEWMRTLANIIKRQEELPELFLAQTGTGTHRFS-QGLANSFALHLQQLSAPFRQ 685

Query: 684 APEKVGWFLTTKVAAKSWLESRGSP 697
           + ++ G F+ TK    SWLES+  P
Sbjct: 686 S-DRPGIFVATKEDLVSWLESKFPP 705

[Close]

BLAST of CmoCh13G003960 vs. ExPASy Swiss-Prot
Match: Q9SIC9 (Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g31400 PE=2 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 5.8e-47
Identity = 143/569 (25.13%), Postives = 274/569 (48.15%), Query Frame = 0


Query: 162 VHRYFQDVLKSSKQ--AVFYNVTLKVFRKCRDFEGAEKLFDEMLERGVKPDNVTFSTIIS 221
           V ++F ++ ++  Q   + +N  L V  +   +E A  LFDEM  R ++ D  +++T++ 
Sbjct: 323 VAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLD 382

Query: 222 CARLCSLPNKAVEWFEKMPSFDCNPDNITYSGMIDAYGRAGNVDMAFSLYDRARTENWRI 281
                   + A E   +MP     P+ ++YS +ID + +AG  D A +L+   R     +
Sbjct: 383 AICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIAL 442

Query: 282 DLSTFSTMIKIHGVAGNYDGCLNVYEEMKAVGIKPNLAIYNSLLAAMGRAKRPWQIKTIY 341
           D  +++T++ I+   G  +  L++  EM +VGIK ++  YN+LL   G+  +  ++K ++
Sbjct: 443 DRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVF 502

Query: 342 KEMTKNGFSPSWATYASLLRAYARARYAEDGMLVYKEMKEKGLQLNVILYNTLLAMCADV 401
            EM +    P+  TY++L+  Y++    ++ M +++E K  GL+ +V+LY+ L+      
Sbjct: 503 TEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKN 562

Query: 402 GYVNEAIEVFKDMKSSGTCSPDSWTFSSMITIYSCSGNVSEAEEMLNEMMEAGFDPNIFV 461
           G V  A+ +  +M   G  SP+  T++S+I  +  S  +  + +  N          +  
Sbjct: 563 GLVGSAVSLIDEMTKEG-ISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSA 622

Query: 462 LTS-----LIQCYGK----------------AKRVDDVVRTFDRLLELGLTPDDRFCGCL 521
           LT      +IQ +G+                 + +  ++  F ++ +L + P+      +
Sbjct: 623 LTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAI 682

Query: 522 LNVITQTPKHE-LSKLIDCVERANPKL-GFVVKLLLGEKDMEGDFRTEASELFSVVSD-- 581
           LN  ++    E  S L++ +   + K+ G V  LL+G+++   +   +A  LF  V++  
Sbjct: 683 LNACSRCNSFEDASMLLEELRLFDNKVYGVVHGLLMGQRE---NVWLQAQSLFDKVNEMD 742

Query: 582 -DVRKAYCNCLIDLCVNLDLLDKACELLDL-GLSVQIYTDLQSRSPTQWSLYLKGLSLGA 641
                A+ N L D+  +     +  EL+ L G S Q++ ++ S S     L L  +S GA
Sbjct: 743 GSTASAFYNALTDMLWHFG-QKRGAELVALEGRSRQVWENVWSDS----CLDLHLMSSGA 802

Query: 642 ALTALHVWINDLTKELKSGEELPPLLGINTGHGKHK--YSDKGLSSVFESHLKELNAPFH 700
           A   +H W+ ++   +  G ELP +L I TG GKH     D  L    E  L+ ++APFH
Sbjct: 803 ARAMVHAWLLNIRSIVYEGHELPKVLSILTGWGKHSKVVGDGALRRAVEVLLRGMDAPFH 862

[Close]

BLAST of CmoCh13G003960 vs. ExPASy TrEMBL
Match: A0A6J1EHV4 (pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111434309 PE=3 SV=1)

HSP 1 Score: 1412.1 bits (3654), Expect = 0.0e+00
Identity = 701/701 (100.00%), Postives = 701/701 (100.00%), Query Frame = 0


Query: 1   MAFQLSHFPSTFFTDHNSLTFHYKTTLCKSFSRVFKLNPIPYHSKPFLQITNVSQQEYAP 60
           MAFQLSHFPSTFFTDHNSLTFHYKTTLCKSFSRVFKLNPIPYHSKPFLQITNVSQQEYAP
Sbjct: 1   MAFQLSHFPSTFFTDHNSLTFHYKTTLCKSFSRVFKLNPIPYHSKPFLQITNVSQQEYAP 60

Query: 61  QETRNPSPSDDEISKFPDGKSGSSSKTSVWVNPSSPRASKLRKQSYEARYASLKKISESL 120
           QETRNPSPSDDEISKFPDGKSGSSSKTSVWVNPSSPRASKLRKQSYEARYASLKKISESL
Sbjct: 61  QETRNPSPSDDEISKFPDGKSGSSSKTSVWVNPSSPRASKLRKQSYEARYASLKKISESL 120

Query: 121 DSCNPCEVDVADVLKRIDSKILEQDAIGVLNNMSNSQTALLVHRYFQDVLKSSKQAVFYN 180
           DSCNPCEVDVADVLKRIDSKILEQDAIGVLNNMSNSQTALLVHRYFQDVLKSSKQAVFYN
Sbjct: 121 DSCNPCEVDVADVLKRIDSKILEQDAIGVLNNMSNSQTALLVHRYFQDVLKSSKQAVFYN 180

Query: 181 VTLKVFRKCRDFEGAEKLFDEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEKMPSF 240
           VTLKVFRKCRDFEGAEKLFDEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEKMPSF
Sbjct: 181 VTLKVFRKCRDFEGAEKLFDEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEKMPSF 240

Query: 241 DCNPDNITYSGMIDAYGRAGNVDMAFSLYDRARTENWRIDLSTFSTMIKIHGVAGNYDGC 300
           DCNPDNITYSGMIDAYGRAGNVDMAFSLYDRARTENWRIDLSTFSTMIKIHGVAGNYDGC
Sbjct: 241 DCNPDNITYSGMIDAYGRAGNVDMAFSLYDRARTENWRIDLSTFSTMIKIHGVAGNYDGC 300

Query: 301 LNVYEEMKAVGIKPNLAIYNSLLAAMGRAKRPWQIKTIYKEMTKNGFSPSWATYASLLRA 360
           LNVYEEMKAVGIKPNLAIYNSLLAAMGRAKRPWQIKTIYKEMTKNGFSPSWATYASLLRA
Sbjct: 301 LNVYEEMKAVGIKPNLAIYNSLLAAMGRAKRPWQIKTIYKEMTKNGFSPSWATYASLLRA 360

Query: 361 YARARYAEDGMLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAIEVFKDMKSSGTCSP 420
           YARARYAEDGMLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAIEVFKDMKSSGTCSP
Sbjct: 361 YARARYAEDGMLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAIEVFKDMKSSGTCSP 420

Query: 421 DSWTFSSMITIYSCSGNVSEAEEMLNEMMEAGFDPNIFVLTSLIQCYGKAKRVDDVVRTF 480
           DSWTFSSMITIYSCSGNVSEAEEMLNEMMEAGFDPNIFVLTSLIQCYGKAKRVDDVVRTF
Sbjct: 421 DSWTFSSMITIYSCSGNVSEAEEMLNEMMEAGFDPNIFVLTSLIQCYGKAKRVDDVVRTF 480

Query: 481 DRLLELGLTPDDRFCGCLLNVITQTPKHELSKLIDCVERANPKLGFVVKLLLGEKDMEGD 540
           DRLLELGLTPDDRFCGCLLNVITQTPKHELSKLIDCVERANPKLGFVVKLLLGEKDMEGD
Sbjct: 481 DRLLELGLTPDDRFCGCLLNVITQTPKHELSKLIDCVERANPKLGFVVKLLLGEKDMEGD 540

Query: 541 FRTEASELFSVVSDDVRKAYCNCLIDLCVNLDLLDKACELLDLGLSVQIYTDLQSRSPTQ 600
           FRTEASELFSVVSDDVRKAYCNCLIDLCVNLDLLDKACELLDLGLSVQIYTDLQSRSPTQ
Sbjct: 541 FRTEASELFSVVSDDVRKAYCNCLIDLCVNLDLLDKACELLDLGLSVQIYTDLQSRSPTQ 600

Query: 601 WSLYLKGLSLGAALTALHVWINDLTKELKSGEELPPLLGINTGHGKHKYSDKGLSSVFES 660
           WSLYLKGLSLGAALTALHVWINDLTKELKSGEELPPLLGINTGHGKHKYSDKGLSSVFES
Sbjct: 601 WSLYLKGLSLGAALTALHVWINDLTKELKSGEELPPLLGINTGHGKHKYSDKGLSSVFES 660

Query: 661 HLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRGSPELVAA 702
           HLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRGSPELVAA
Sbjct: 661 HLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRGSPELVAA 701

[Close]

BLAST of CmoCh13G003960 vs. ExPASy TrEMBL
Match: A0A6J1IDL0 (pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111471637 PE=3 SV=1)

HSP 1 Score: 1377.5 bits (3564), Expect = 0.0e+00
Identity = 685/701 (97.72%), Postives = 692/701 (98.72%), Query Frame = 0


Query: 1   MAFQLSHFPSTFFTDHNSLTFHYKTTLCKSFSRVFKLNPIPYHSKPFLQITNVSQQEYAP 60
           MAFQLSHFP TFFTDHNSLTFH KTTLCKS SRVFKLNPIPYHSKPFLQITNVSQQEYAP
Sbjct: 1   MAFQLSHFPYTFFTDHNSLTFHSKTTLCKSSSRVFKLNPIPYHSKPFLQITNVSQQEYAP 60

Query: 61  QETRNPSPSDDEISKFPDGKSGSSSKTSVWVNPSSPRASKLRKQSYEARYASLKKISESL 120
           QETRNPSPSDDEISKFPDGKSGSSSKTSVWVNPSSPRASKLRKQSYEARYASLKKISESL
Sbjct: 61  QETRNPSPSDDEISKFPDGKSGSSSKTSVWVNPSSPRASKLRKQSYEARYASLKKISESL 120

Query: 121 DSCNPCEVDVADVLKRIDSKILEQDAIGVLNNMSNSQTALLVHRYFQDVLKSSKQAVFYN 180
           DSCNPCE DVADVLKRID KILEQDAIGVLNNMSNSQTALLV RYFQDVLKSSKQAVFYN
Sbjct: 121 DSCNPCEDDVADVLKRIDRKILEQDAIGVLNNMSNSQTALLVLRYFQDVLKSSKQAVFYN 180

Query: 181 VTLKVFRKCRDFEGAEKLFDEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEKMPSF 240
           VTLKVFRKC+DFEGAEKLFDEML+RGVKPDNVTFSTIISCARLCSLPNKAVEWFEKMPSF
Sbjct: 181 VTLKVFRKCKDFEGAEKLFDEMLKRGVKPDNVTFSTIISCARLCSLPNKAVEWFEKMPSF 240

Query: 241 DCNPDNITYSGMIDAYGRAGNVDMAFSLYDRARTENWRIDLSTFSTMIKIHGVAGNYDGC 300
           DCNPD+ITYSGMIDAYGRAGNVDMAFSLYDRARTENWRIDLSTFSTMIKIHGVAGNYDGC
Sbjct: 241 DCNPDDITYSGMIDAYGRAGNVDMAFSLYDRARTENWRIDLSTFSTMIKIHGVAGNYDGC 300

Query: 301 LNVYEEMKAVGIKPNLAIYNSLLAAMGRAKRPWQIKTIYKEMTKNGFSPSWATYASLLRA 360
           LNVYEEMKAVGIKPNLAIYNSLLAAMGRAKRPWQIKTIY+EM KNGFSPSWATYASLLRA
Sbjct: 301 LNVYEEMKAVGIKPNLAIYNSLLAAMGRAKRPWQIKTIYREMIKNGFSPSWATYASLLRA 360

Query: 361 YARARYAEDGMLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAIEVFKDMKSSGTCSP 420
           YARARYAEDGMLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAIEVFKDMKSSGTCSP
Sbjct: 361 YARARYAEDGMLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAIEVFKDMKSSGTCSP 420

Query: 421 DSWTFSSMITIYSCSGNVSEAEEMLNEMMEAGFDPNIFVLTSLIQCYGKAKRVDDVVRTF 480
           DSWTFSSMITIYSCSGNVSEAEEMLNEMMEAGFDPNIFVLTSLIQCYGKAKRVDDVVRTF
Sbjct: 421 DSWTFSSMITIYSCSGNVSEAEEMLNEMMEAGFDPNIFVLTSLIQCYGKAKRVDDVVRTF 480

Query: 481 DRLLELGLTPDDRFCGCLLNVITQTPKHELSKLIDCVERANPKLGFVVKLLLGEKDMEGD 540
           DRLLELGLTPDDRFCGCLLNVITQTPKHELSKLIDCVERANPKLGF+V+LL+GEKDMEGD
Sbjct: 481 DRLLELGLTPDDRFCGCLLNVITQTPKHELSKLIDCVERANPKLGFMVRLLVGEKDMEGD 540

Query: 541 FRTEASELFSVVSDDVRKAYCNCLIDLCVNLDLLDKACELLDLGLSVQIYTDLQSRSPTQ 600
           FRTEASELFSVVSDDVRKAYCNCLIDLCVNLDLLDKACELLDLGLSVQIYTDLQSRS TQ
Sbjct: 541 FRTEASELFSVVSDDVRKAYCNCLIDLCVNLDLLDKACELLDLGLSVQIYTDLQSRSTTQ 600

Query: 601 WSLYLKGLSLGAALTALHVWINDLTKELKSGEELPPLLGINTGHGKHKYSDKGLSSVFES 660
           WSLYLKGLSLGAALTALHVWINDLTKELKSGEELPPLLGINTGHGKHKYSDKGLSSVFES
Sbjct: 601 WSLYLKGLSLGAALTALHVWINDLTKELKSGEELPPLLGINTGHGKHKYSDKGLSSVFES 660

Query: 661 HLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRGSPELVAA 702
           HLKELNAPFHEAPEKVGWFLTTKVAAKSWLESR SPELVAA
Sbjct: 661 HLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 701

[Close]

BLAST of CmoCh13G003960 vs. ExPASy TrEMBL
Match: A0A5A7TLM5 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold477G00400 PE=3 SV=1)

HSP 1 Score: 1236.1 bits (3197), Expect = 0.0e+00
Identity = 616/705 (87.38%), Postives = 655/705 (92.91%), Query Frame = 0


Query: 1   MAFQLSHFPSTFFTDH----NSLTFHYKTTLCKSFSRVFKLNPIPYHSKPFLQITNVSQQ 60
           MAFQL H P TFFT H    NSLT   KTTL  S S +FKLNPIP HS PFLQITN+S Q
Sbjct: 1   MAFQLCHSPPTFFTYHHSLSNSLTPQRKTTLSNS-SPLFKLNPIPRHSTPFLQITNISLQ 60

Query: 61  EYAPQETRNPSPSDDEISKFPDGKSGSSSKTSVWVNPSSPRASKLRKQSYEARYASLKKI 120
           E++PQET N  PSDDEISK+ D KSGSSSK+SVWVNP SPRASKLRKQSYEARYASL +I
Sbjct: 61  EHSPQETHNTIPSDDEISKYSDAKSGSSSKSSVWVNPRSPRASKLRKQSYEARYASLVRI 120

Query: 121 SESLDSCNPCEVDVADVLKRIDSKILEQDAIGVLNNMSNSQTALLVHRYFQDVLKSSKQA 180
           SESLDSCNPCEVDVADVLK I + ILEQDA+ VLNNMSNSQTALL  RYFQD+LKSSKQ 
Sbjct: 121 SESLDSCNPCEVDVADVLKVIGNNILEQDAVVVLNNMSNSQTALLALRYFQDMLKSSKQT 180

Query: 181 VFYNVTLKVFRKCRDFEGAEKLFDEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEK 240
           +FYNVTLKVFRKCRD EGAE+LF+EML RGVKPDNVTFSTIISCARLCSLP+KAVEWFEK
Sbjct: 181 IFYNVTLKVFRKCRDMEGAEELFEEMLNRGVKPDNVTFSTIISCARLCSLPSKAVEWFEK 240

Query: 241 MPSFDCNPDNITYSGMIDAYGRAGNVDMAFSLYDRARTENWRIDLSTFSTMIKIHGVAGN 300
           MPSFDCNPD++TYS MIDAYGRAGNVDMAFSLYDRARTENWRID +TFSTMIKIHGVAGN
Sbjct: 241 MPSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGN 300

Query: 301 YDGCLNVYEEMKAVGIKPNLAIYNSLLAAMGRAKRPWQIKTIYKEMTKNGFSPSWATYAS 360
           YDGCLNVYEEMKA+GIKPNL IYNSLL AMGRAKRPWQIKTIYKEM K+GFSPSWATYAS
Sbjct: 301 YDGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKSGFSPSWATYAS 360

Query: 361 LLRAYARARYAEDGMLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAIEVFKDMKSSG 420
           LLRAY RARY ED ++VYKEMKEKGLQLNVILYNTLLAMCADVGYVNEA+E+F+DMK+SG
Sbjct: 361 LLRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKNSG 420

Query: 421 TCSPDSWTFSSMITIYSCSGNVSEAEEMLNEMMEAGFDPNIFVLTSLIQCYGKAKRVDDV 480
           TCSPDSWTFSSMITIYSCSG VSEAEEMLN+M+EAGFDPNIFVLTSLIQCYGKAKRVDDV
Sbjct: 421 TCSPDSWTFSSMITIYSCSGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDV 480

Query: 481 VRTFDRLLELGLTPDDRFCGCLLNVITQTPKHELSKLIDCVERANPKLGFVVKLLLGEKD 540
           VRTF++L+ELGLTPDDRFCGCLLNVITQTPK E+SKLIDCV RANPKLGFVV+LLLGE+D
Sbjct: 481 VRTFNQLIELGLTPDDRFCGCLLNVITQTPKEEISKLIDCVVRANPKLGFVVELLLGEQD 540

Query: 541 MEGDFRTEASELFSVVSDDVRKAYCNCLIDLCVNLDLLDKACELLDLGLSVQIYTDLQSR 600
            EG+FRTEASELFSVVS DVRKAYCNCLIDLCVNLDLLDKACELL+LGL++QIY DLQSR
Sbjct: 541 KEGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLNLGLTLQIYKDLQSR 600

Query: 601 SPTQWSLYLKGLSLGAALTALHVWINDLTKELKSGEELPPLLGINTGHGKHKYSDKGLSS 660
           SPTQWSLYLKGLSLGAALTALHVWINDLTK L+SGEELPPLLGINTGHGKHKYSDKGL+S
Sbjct: 601 SPTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGLAS 660

Query: 661 VFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRGSPELVAA 702
           VFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESR SPELVAA
Sbjct: 661 VFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 704

[Close]

BLAST of CmoCh13G003960 vs. ExPASy TrEMBL
Match: A0A1S3CL39 (pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103502208 PE=3 SV=1)

HSP 1 Score: 1236.1 bits (3197), Expect = 0.0e+00
Identity = 616/705 (87.38%), Postives = 655/705 (92.91%), Query Frame = 0


Query: 1   MAFQLSHFPSTFFTDH----NSLTFHYKTTLCKSFSRVFKLNPIPYHSKPFLQITNVSQQ 60
           MAFQL H P TFFT H    NSLT   KTTL  S S +FKLNPIP HS PFLQITN+S Q
Sbjct: 1   MAFQLCHSPPTFFTYHHSLSNSLTPQRKTTLSNS-SPLFKLNPIPRHSTPFLQITNISLQ 60

Query: 61  EYAPQETRNPSPSDDEISKFPDGKSGSSSKTSVWVNPSSPRASKLRKQSYEARYASLKKI 120
           E++PQET N  PSDDEISK+ D KSGSSSK+SVWVNP SPRASKLRKQSYEARYASL +I
Sbjct: 61  EHSPQETHNTIPSDDEISKYSDAKSGSSSKSSVWVNPRSPRASKLRKQSYEARYASLVRI 120

Query: 121 SESLDSCNPCEVDVADVLKRIDSKILEQDAIGVLNNMSNSQTALLVHRYFQDVLKSSKQA 180
           SESLDSCNPCEVDVADVLK I + ILEQDA+ VLNNMSNSQTALL  RYFQD+LKSSKQ 
Sbjct: 121 SESLDSCNPCEVDVADVLKVIGNNILEQDAVVVLNNMSNSQTALLALRYFQDMLKSSKQT 180

Query: 181 VFYNVTLKVFRKCRDFEGAEKLFDEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEK 240
           +FYNVTLKVFRKCRD EGAE+LF+EML RGVKPDNVTFSTIISCARLCSLP+KAVEWFEK
Sbjct: 181 IFYNVTLKVFRKCRDMEGAEELFEEMLNRGVKPDNVTFSTIISCARLCSLPSKAVEWFEK 240

Query: 241 MPSFDCNPDNITYSGMIDAYGRAGNVDMAFSLYDRARTENWRIDLSTFSTMIKIHGVAGN 300
           MPSFDCNPD++TYS MIDAYGRAGNVDMAFSLYDRARTENWRID +TFSTMIKIHGVAGN
Sbjct: 241 MPSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGN 300

Query: 301 YDGCLNVYEEMKAVGIKPNLAIYNSLLAAMGRAKRPWQIKTIYKEMTKNGFSPSWATYAS 360
           YDGCLNVYEEMKA+GIKPNL IYNSLL AMGRAKRPWQIKTIYKEM K+GFSPSWATYAS
Sbjct: 301 YDGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKSGFSPSWATYAS 360

Query: 361 LLRAYARARYAEDGMLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAIEVFKDMKSSG 420
           LLRAY RARY ED ++VYKEMKEKGLQLNVILYNTLLAMCADVGYVNEA+E+F+DMK+SG
Sbjct: 361 LLRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKNSG 420

Query: 421 TCSPDSWTFSSMITIYSCSGNVSEAEEMLNEMMEAGFDPNIFVLTSLIQCYGKAKRVDDV 480
           TCSPDSWTFSSMITIYSCSG VSEAEEMLN+M+EAGFDPNIFVLTSLIQCYGKAKRVDDV
Sbjct: 421 TCSPDSWTFSSMITIYSCSGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDV 480

Query: 481 VRTFDRLLELGLTPDDRFCGCLLNVITQTPKHELSKLIDCVERANPKLGFVVKLLLGEKD 540
           VRTF++L+ELGLTPDDRFCGCLLNVITQTPK E+SKLIDCV RANPKLGFVV+LLLGE+D
Sbjct: 481 VRTFNQLIELGLTPDDRFCGCLLNVITQTPKEEISKLIDCVVRANPKLGFVVELLLGEQD 540

Query: 541 MEGDFRTEASELFSVVSDDVRKAYCNCLIDLCVNLDLLDKACELLDLGLSVQIYTDLQSR 600
            EG+FRTEASELFSVVS DVRKAYCNCLIDLCVNLDLLDKACELL+LGL++QIY DLQSR
Sbjct: 541 KEGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLNLGLTLQIYKDLQSR 600

Query: 601 SPTQWSLYLKGLSLGAALTALHVWINDLTKELKSGEELPPLLGINTGHGKHKYSDKGLSS 660
           SPTQWSLYLKGLSLGAALTALHVWINDLTK L+SGEELPPLLGINTGHGKHKYSDKGL+S
Sbjct: 601 SPTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGLAS 660

Query: 661 VFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRGSPELVAA 702
           VFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESR SPELVAA
Sbjct: 661 VFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 704

[Close]

BLAST of CmoCh13G003960 vs. ExPASy TrEMBL
Match: A0A0A0LVP1 (Smr domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G173140 PE=3 SV=1)

HSP 1 Score: 1227.2 bits (3174), Expect = 0.0e+00
Identity = 613/705 (86.95%), Postives = 652/705 (92.48%), Query Frame = 0


Query: 1   MAFQLSHFPSTFFTDH----NSLTFHYKTTLCKSFSRVFKLNPIPYHSKPFLQITNVSQQ 60
           MAFQL + P TFFT+H    NSLT   KTTL  S S +FKL+PIP HSKPFLQITNVS Q
Sbjct: 1   MAFQLCYSPPTFFTEHHFLSNSLTPQRKTTLSNS-SPLFKLSPIPRHSKPFLQITNVSLQ 60

Query: 61  EYAPQETRNPSPSDDEISKFPDGKSGSSSKTSVWVNPSSPRASKLRKQSYEARYASLKKI 120
           E+APQ+T+N  PS DEISK+PD KSGSSS +SVWVNP SPRASKLRKQSYEARYASL ++
Sbjct: 61  EHAPQDTQNTIPSADEISKYPDSKSGSSSNSSVWVNPRSPRASKLRKQSYEARYASLIRV 120

Query: 121 SESLDSCNPCEVDVADVLKRIDSKILEQDAIGVLNNMSNSQTALLVHRYFQDVLKSSKQA 180
           SESLDS NPCEVDVADVLK I + ILE+DAI VLNNMSNSQTALL  RYFQD+LKSSKQ 
Sbjct: 121 SESLDSSNPCEVDVADVLKVIGNNILERDAILVLNNMSNSQTALLALRYFQDMLKSSKQT 180

Query: 181 VFYNVTLKVFRKCRDFEGAEKLFDEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEK 240
           +FYNVTLKVFRKCRD EGAEKLF+EM+ RGVKPDNVTFSTIISCARLCSLP+KAVEWFEK
Sbjct: 181 IFYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFSTIISCARLCSLPSKAVEWFEK 240

Query: 241 MPSFDCNPDNITYSGMIDAYGRAGNVDMAFSLYDRARTENWRIDLSTFSTMIKIHGVAGN 300
           MPSFDCNPD++TYS MIDAYGRAGNVDMAFSLYDRARTENWRID +TFSTMIKIHGVAGN
Sbjct: 241 MPSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGN 300

Query: 301 YDGCLNVYEEMKAVGIKPNLAIYNSLLAAMGRAKRPWQIKTIYKEMTKNGFSPSWATYAS 360
           YDGCLNVYEEMKA+GIKPNL IYN LL AMGRAKRPWQIKTIYKEM KNGFSPSWATYAS
Sbjct: 301 YDGCLNVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYAS 360

Query: 361 LLRAYARARYAEDGMLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAIEVFKDMKSSG 420
           LLRAY RARY ED ++VYKEMKEKGLQLNVILYNTLLAMCADVGYVNEA+E+F+DMKSSG
Sbjct: 361 LLRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKSSG 420

Query: 421 TCSPDSWTFSSMITIYSCSGNVSEAEEMLNEMMEAGFDPNIFVLTSLIQCYGKAKRVDDV 480
           TCSPDSWTFSSMITIYSC G VSEAEEMLN+M+EAGFDPNIFVLTSLIQCYGKAKRVDDV
Sbjct: 421 TCSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDV 480

Query: 481 VRTFDRLLELGLTPDDRFCGCLLNVITQTPKHELSKLIDCVERANPKLGFVVKLLLGEKD 540
           VRTF++L+ELGLTPDDRFCGCLLNVITQTPK EL KLIDCV RANPKLGFVV+LLLGE+D
Sbjct: 481 VRTFNQLIELGLTPDDRFCGCLLNVITQTPKGELGKLIDCVVRANPKLGFVVELLLGEQD 540

Query: 541 MEGDFRTEASELFSVVSDDVRKAYCNCLIDLCVNLDLLDKACELLDLGLSVQIYTDLQSR 600
            EG+FRTEASELFSVVS DVRKAYCNCLIDLCVNLDLLDKACELLDLGL++QIY DLQSR
Sbjct: 541 KEGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSR 600

Query: 601 SPTQWSLYLKGLSLGAALTALHVWINDLTKELKSGEELPPLLGINTGHGKHKYSDKGLSS 660
           SPTQWSLYLKGLSLGAALTALHVWI DLTK L+SGEELPPLLGINTGHGKHKYSDKGL+S
Sbjct: 601 SPTQWSLYLKGLSLGAALTALHVWIKDLTKVLESGEELPPLLGINTGHGKHKYSDKGLAS 660

Query: 661 VFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRGSPELVAA 702
           VFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESR SPELVAA
Sbjct: 661 VFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 704

[Close]

BLAST of CmoCh13G003960 vs. NCBI nr
Match: XP_022927501.1 (pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Cucurbita moschata])

HSP 1 Score: 1412.1 bits (3654), Expect = 0.0e+00
Identity = 701/701 (100.00%), Postives = 701/701 (100.00%), Query Frame = 0


Query: 1   MAFQLSHFPSTFFTDHNSLTFHYKTTLCKSFSRVFKLNPIPYHSKPFLQITNVSQQEYAP 60
           MAFQLSHFPSTFFTDHNSLTFHYKTTLCKSFSRVFKLNPIPYHSKPFLQITNVSQQEYAP
Sbjct: 1   MAFQLSHFPSTFFTDHNSLTFHYKTTLCKSFSRVFKLNPIPYHSKPFLQITNVSQQEYAP 60

Query: 61  QETRNPSPSDDEISKFPDGKSGSSSKTSVWVNPSSPRASKLRKQSYEARYASLKKISESL 120
           QETRNPSPSDDEISKFPDGKSGSSSKTSVWVNPSSPRASKLRKQSYEARYASLKKISESL
Sbjct: 61  QETRNPSPSDDEISKFPDGKSGSSSKTSVWVNPSSPRASKLRKQSYEARYASLKKISESL 120

Query: 121 DSCNPCEVDVADVLKRIDSKILEQDAIGVLNNMSNSQTALLVHRYFQDVLKSSKQAVFYN 180
           DSCNPCEVDVADVLKRIDSKILEQDAIGVLNNMSNSQTALLVHRYFQDVLKSSKQAVFYN
Sbjct: 121 DSCNPCEVDVADVLKRIDSKILEQDAIGVLNNMSNSQTALLVHRYFQDVLKSSKQAVFYN 180

Query: 181 VTLKVFRKCRDFEGAEKLFDEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEKMPSF 240
           VTLKVFRKCRDFEGAEKLFDEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEKMPSF
Sbjct: 181 VTLKVFRKCRDFEGAEKLFDEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEKMPSF 240

Query: 241 DCNPDNITYSGMIDAYGRAGNVDMAFSLYDRARTENWRIDLSTFSTMIKIHGVAGNYDGC 300
           DCNPDNITYSGMIDAYGRAGNVDMAFSLYDRARTENWRIDLSTFSTMIKIHGVAGNYDGC
Sbjct: 241 DCNPDNITYSGMIDAYGRAGNVDMAFSLYDRARTENWRIDLSTFSTMIKIHGVAGNYDGC 300

Query: 301 LNVYEEMKAVGIKPNLAIYNSLLAAMGRAKRPWQIKTIYKEMTKNGFSPSWATYASLLRA 360
           LNVYEEMKAVGIKPNLAIYNSLLAAMGRAKRPWQIKTIYKEMTKNGFSPSWATYASLLRA
Sbjct: 301 LNVYEEMKAVGIKPNLAIYNSLLAAMGRAKRPWQIKTIYKEMTKNGFSPSWATYASLLRA 360

Query: 361 YARARYAEDGMLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAIEVFKDMKSSGTCSP 420
           YARARYAEDGMLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAIEVFKDMKSSGTCSP
Sbjct: 361 YARARYAEDGMLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAIEVFKDMKSSGTCSP 420

Query: 421 DSWTFSSMITIYSCSGNVSEAEEMLNEMMEAGFDPNIFVLTSLIQCYGKAKRVDDVVRTF 480
           DSWTFSSMITIYSCSGNVSEAEEMLNEMMEAGFDPNIFVLTSLIQCYGKAKRVDDVVRTF
Sbjct: 421 DSWTFSSMITIYSCSGNVSEAEEMLNEMMEAGFDPNIFVLTSLIQCYGKAKRVDDVVRTF 480

Query: 481 DRLLELGLTPDDRFCGCLLNVITQTPKHELSKLIDCVERANPKLGFVVKLLLGEKDMEGD 540
           DRLLELGLTPDDRFCGCLLNVITQTPKHELSKLIDCVERANPKLGFVVKLLLGEKDMEGD
Sbjct: 481 DRLLELGLTPDDRFCGCLLNVITQTPKHELSKLIDCVERANPKLGFVVKLLLGEKDMEGD 540

Query: 541 FRTEASELFSVVSDDVRKAYCNCLIDLCVNLDLLDKACELLDLGLSVQIYTDLQSRSPTQ 600
           FRTEASELFSVVSDDVRKAYCNCLIDLCVNLDLLDKACELLDLGLSVQIYTDLQSRSPTQ
Sbjct: 541 FRTEASELFSVVSDDVRKAYCNCLIDLCVNLDLLDKACELLDLGLSVQIYTDLQSRSPTQ 600

Query: 601 WSLYLKGLSLGAALTALHVWINDLTKELKSGEELPPLLGINTGHGKHKYSDKGLSSVFES 660
           WSLYLKGLSLGAALTALHVWINDLTKELKSGEELPPLLGINTGHGKHKYSDKGLSSVFES
Sbjct: 601 WSLYLKGLSLGAALTALHVWINDLTKELKSGEELPPLLGINTGHGKHKYSDKGLSSVFES 660

Query: 661 HLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRGSPELVAA 702
           HLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRGSPELVAA
Sbjct: 661 HLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRGSPELVAA 701

[Close]

BLAST of CmoCh13G003960 vs. NCBI nr
Match: KAG6583722.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1402.1 bits (3628), Expect = 0.0e+00
Identity = 698/701 (99.57%), Postives = 698/701 (99.57%), Query Frame = 0


Query: 1   MAFQLSHFPSTFFTDHNSLTFHYKTTLCKSFSRVFKLNPIPYHSKPFLQITNVSQQEYAP 60
           MAFQLSHFPSTFFTDHNSLTFHYKTTLCKS SRVFKLNPIPYHSKPFLQITNVSQQEYAP
Sbjct: 1   MAFQLSHFPSTFFTDHNSLTFHYKTTLCKSSSRVFKLNPIPYHSKPFLQITNVSQQEYAP 60

Query: 61  QETRNPSPSDDEISKFPDGKSGSSSKTSVWVNPSSPRASKLRKQSYEARYASLKKISESL 120
           QETRNPSPSDDEISKFPDGKSGSSSKTSVWVNPSSPRASKLRKQSYEARYASLKKISESL
Sbjct: 61  QETRNPSPSDDEISKFPDGKSGSSSKTSVWVNPSSPRASKLRKQSYEARYASLKKISESL 120

Query: 121 DSCNPCEVDVADVLKRIDSKILEQDAIGVLNNMSNSQTALLVHRYFQDVLKSSKQAVFYN 180
           DSCNPCE DVADVLKRIDSKILEQDAIGVLNNMSNSQTALLV RYFQDVLKSSKQAVFYN
Sbjct: 121 DSCNPCEDDVADVLKRIDSKILEQDAIGVLNNMSNSQTALLVLRYFQDVLKSSKQAVFYN 180

Query: 181 VTLKVFRKCRDFEGAEKLFDEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEKMPSF 240
           VTLKVFRKCRDFEGAEKLFDEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEKMPSF
Sbjct: 181 VTLKVFRKCRDFEGAEKLFDEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEKMPSF 240

Query: 241 DCNPDNITYSGMIDAYGRAGNVDMAFSLYDRARTENWRIDLSTFSTMIKIHGVAGNYDGC 300
           DCNPDNITYSGMIDAYGRAGNVDMAFSLYDRARTENWRIDLSTFSTMIKIHGVAGNYDGC
Sbjct: 241 DCNPDNITYSGMIDAYGRAGNVDMAFSLYDRARTENWRIDLSTFSTMIKIHGVAGNYDGC 300

Query: 301 LNVYEEMKAVGIKPNLAIYNSLLAAMGRAKRPWQIKTIYKEMTKNGFSPSWATYASLLRA 360
           LNVYEEMKAVGIKPNLAIYNSLLAAMGRAKRPWQIKTIYKEMTKNGFSPSWATYASLLRA
Sbjct: 301 LNVYEEMKAVGIKPNLAIYNSLLAAMGRAKRPWQIKTIYKEMTKNGFSPSWATYASLLRA 360

Query: 361 YARARYAEDGMLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAIEVFKDMKSSGTCSP 420
           YARARYAEDGMLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAIEVFKDMKSSGTCSP
Sbjct: 361 YARARYAEDGMLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAIEVFKDMKSSGTCSP 420

Query: 421 DSWTFSSMITIYSCSGNVSEAEEMLNEMMEAGFDPNIFVLTSLIQCYGKAKRVDDVVRTF 480
           DSWTFSSMITIYSCSGNVSEAEEMLNEMMEAGFDPNIFVLTSLIQCYGKAKRVDDVVRTF
Sbjct: 421 DSWTFSSMITIYSCSGNVSEAEEMLNEMMEAGFDPNIFVLTSLIQCYGKAKRVDDVVRTF 480

Query: 481 DRLLELGLTPDDRFCGCLLNVITQTPKHELSKLIDCVERANPKLGFVVKLLLGEKDMEGD 540
           DRLLELGLTPDDRFCGCLLNVITQTPKHELSKLIDCVERANPKLGFVVKLLLGEKDMEGD
Sbjct: 481 DRLLELGLTPDDRFCGCLLNVITQTPKHELSKLIDCVERANPKLGFVVKLLLGEKDMEGD 540

Query: 541 FRTEASELFSVVSDDVRKAYCNCLIDLCVNLDLLDKACELLDLGLSVQIYTDLQSRSPTQ 600
           FRTEASELFSVVSDDVRKAYCNCLIDLCVNLDLLDKACELLDLGLSVQIYTDLQSRSPTQ
Sbjct: 541 FRTEASELFSVVSDDVRKAYCNCLIDLCVNLDLLDKACELLDLGLSVQIYTDLQSRSPTQ 600

Query: 601 WSLYLKGLSLGAALTALHVWINDLTKELKSGEELPPLLGINTGHGKHKYSDKGLSSVFES 660
           WSLYLKGLSLGAALTALHVWINDLTKELKSGEELPPLLGINTGHGKHKYSDKGLSSVFES
Sbjct: 601 WSLYLKGLSLGAALTALHVWINDLTKELKSGEELPPLLGINTGHGKHKYSDKGLSSVFES 660

Query: 661 HLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRGSPELVAA 702
           HLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRGSPELVAA
Sbjct: 661 HLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRGSPELVAA 701

[Close]

BLAST of CmoCh13G003960 vs. NCBI nr
Match: KAG7019368.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1394.0 bits (3607), Expect = 0.0e+00
Identity = 694/701 (99.00%), Postives = 697/701 (99.43%), Query Frame = 0


Query: 1   MAFQLSHFPSTFFTDHNSLTFHYKTTLCKSFSRVFKLNPIPYHSKPFLQITNVSQQEYAP 60
           MAFQLSHFPSTFFTDHNSLTFHYKTTLCKS SRVFKLNPIPYHSKPFLQIT+VSQQEYAP
Sbjct: 1   MAFQLSHFPSTFFTDHNSLTFHYKTTLCKSSSRVFKLNPIPYHSKPFLQITDVSQQEYAP 60

Query: 61  QETRNPSPSDDEISKFPDGKSGSSSKTSVWVNPSSPRASKLRKQSYEARYASLKKISESL 120
           QETRNPSPSDDEISKFPDGKSGSSSKTSVWVNPSSPRASKLRKQSYEARYASLKKISESL
Sbjct: 61  QETRNPSPSDDEISKFPDGKSGSSSKTSVWVNPSSPRASKLRKQSYEARYASLKKISESL 120

Query: 121 DSCNPCEVDVADVLKRIDSKILEQDAIGVLNNMSNSQTALLVHRYFQDVLKSSKQAVFYN 180
           DSCN CE DVADVLKRIDSKILEQDAIGVLNNMSNSQTALLV RYFQDVLKSSKQAVFYN
Sbjct: 121 DSCNTCEDDVADVLKRIDSKILEQDAIGVLNNMSNSQTALLVLRYFQDVLKSSKQAVFYN 180

Query: 181 VTLKVFRKCRDFEGAEKLFDEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEKMPSF 240
           VTLKVFRKCRDFEGAEKLFDEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEKMPSF
Sbjct: 181 VTLKVFRKCRDFEGAEKLFDEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEKMPSF 240

Query: 241 DCNPDNITYSGMIDAYGRAGNVDMAFSLYDRARTENWRIDLSTFSTMIKIHGVAGNYDGC 300
           DCNPDNITYSGMIDAYGRAG+VDMAFSLYDRARTENWRIDLSTFSTMIKIHGVAGNYDGC
Sbjct: 241 DCNPDNITYSGMIDAYGRAGDVDMAFSLYDRARTENWRIDLSTFSTMIKIHGVAGNYDGC 300

Query: 301 LNVYEEMKAVGIKPNLAIYNSLLAAMGRAKRPWQIKTIYKEMTKNGFSPSWATYASLLRA 360
           LNVYEEMKAVGIKPNLAIYNSLLAAMGRAKRPWQIKTIYKEMTKNGFSPSWATYASLLRA
Sbjct: 301 LNVYEEMKAVGIKPNLAIYNSLLAAMGRAKRPWQIKTIYKEMTKNGFSPSWATYASLLRA 360

Query: 361 YARARYAEDGMLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAIEVFKDMKSSGTCSP 420
           YARARYAEDGMLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAIEVFKDMKSSGTCSP
Sbjct: 361 YARARYAEDGMLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAIEVFKDMKSSGTCSP 420

Query: 421 DSWTFSSMITIYSCSGNVSEAEEMLNEMMEAGFDPNIFVLTSLIQCYGKAKRVDDVVRTF 480
           DSWTFSSMITIYSCSGNVSEAEEMLNEMMEAGFDPNIFVLTSLIQCYGKAKRVDDVVRTF
Sbjct: 421 DSWTFSSMITIYSCSGNVSEAEEMLNEMMEAGFDPNIFVLTSLIQCYGKAKRVDDVVRTF 480

Query: 481 DRLLELGLTPDDRFCGCLLNVITQTPKHELSKLIDCVERANPKLGFVVKLLLGEKDMEGD 540
           DRLLELGLTPDDRFCGCLLNVITQTPKHELSKLIDCVERANPKLGFVVKLLLGE+DMEGD
Sbjct: 481 DRLLELGLTPDDRFCGCLLNVITQTPKHELSKLIDCVERANPKLGFVVKLLLGERDMEGD 540

Query: 541 FRTEASELFSVVSDDVRKAYCNCLIDLCVNLDLLDKACELLDLGLSVQIYTDLQSRSPTQ 600
           FRTEASELFSVVSDDVRKAYCNCLIDLCVNLDLLDKACELLDLGLSVQIYTDLQSRSPTQ
Sbjct: 541 FRTEASELFSVVSDDVRKAYCNCLIDLCVNLDLLDKACELLDLGLSVQIYTDLQSRSPTQ 600

Query: 601 WSLYLKGLSLGAALTALHVWINDLTKELKSGEELPPLLGINTGHGKHKYSDKGLSSVFES 660
           WSLYLKGLSLGAALTALHVWINDLTKELKSGEELPPLLGINTGHGKHKYSDKGLSSVFES
Sbjct: 601 WSLYLKGLSLGAALTALHVWINDLTKELKSGEELPPLLGINTGHGKHKYSDKGLSSVFES 660

Query: 661 HLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRGSPELVAA 702
           HLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRGSPELVAA
Sbjct: 661 HLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRGSPELVAA 701

[Close]

BLAST of CmoCh13G003960 vs. NCBI nr
Match: XP_023520706.1 (pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1390.9 bits (3599), Expect = 0.0e+00
Identity = 693/701 (98.86%), Postives = 694/701 (99.00%), Query Frame = 0


Query: 1   MAFQLSHFPSTFFTDHNSLTFHYKTTLCKSFSRVFKLNPIPYHSKPFLQITNVSQQEYAP 60
           MAFQLSHFPSTFFTDHNSLTFHYKTTLCKS SRVFKLNPIPYHSKPFLQITNVS QEYAP
Sbjct: 1   MAFQLSHFPSTFFTDHNSLTFHYKTTLCKSSSRVFKLNPIPYHSKPFLQITNVSPQEYAP 60

Query: 61  QETRNPSPSDDEISKFPDGKSGSSSKTSVWVNPSSPRASKLRKQSYEARYASLKKISESL 120
           QETRN SPSDDEISKFPDGKSGSSSKTSVWVNPSSPRASKLRKQSYEARYASLKKISESL
Sbjct: 61  QETRNSSPSDDEISKFPDGKSGSSSKTSVWVNPSSPRASKLRKQSYEARYASLKKISESL 120

Query: 121 DSCNPCEVDVADVLKRIDSKILEQDAIGVLNNMSNSQTALLVHRYFQDVLKSSKQAVFYN 180
           DSCNPCE DVADVLKRIDSKILEQDAIGVLNNMSNSQTALLV RYFQDVLKSSKQAVFYN
Sbjct: 121 DSCNPCEDDVADVLKRIDSKILEQDAIGVLNNMSNSQTALLVLRYFQDVLKSSKQAVFYN 180

Query: 181 VTLKVFRKCRDFEGAEKLFDEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEKMPSF 240
           VTLKVFRKCRDFEGAEKLFDEMLERGVKPDNVTFSTIISCAR CSLPNKAVEWFE MPSF
Sbjct: 181 VTLKVFRKCRDFEGAEKLFDEMLERGVKPDNVTFSTIISCARFCSLPNKAVEWFEMMPSF 240

Query: 241 DCNPDNITYSGMIDAYGRAGNVDMAFSLYDRARTENWRIDLSTFSTMIKIHGVAGNYDGC 300
           DCNPD+ITYSGMIDAYGRAGNVDMAFSLYDRARTENWRIDLSTFSTMIKIHGVAGNYDGC
Sbjct: 241 DCNPDDITYSGMIDAYGRAGNVDMAFSLYDRARTENWRIDLSTFSTMIKIHGVAGNYDGC 300

Query: 301 LNVYEEMKAVGIKPNLAIYNSLLAAMGRAKRPWQIKTIYKEMTKNGFSPSWATYASLLRA 360
           LNVYEEMKAVGIKPNLAIYNSLLAAMGRAKRPWQIKTIYKEMTKNGFSPSWATYASLLRA
Sbjct: 301 LNVYEEMKAVGIKPNLAIYNSLLAAMGRAKRPWQIKTIYKEMTKNGFSPSWATYASLLRA 360

Query: 361 YARARYAEDGMLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAIEVFKDMKSSGTCSP 420
           YARARYAEDGMLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAIEVFKDMKSSGTCSP
Sbjct: 361 YARARYAEDGMLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAIEVFKDMKSSGTCSP 420

Query: 421 DSWTFSSMITIYSCSGNVSEAEEMLNEMMEAGFDPNIFVLTSLIQCYGKAKRVDDVVRTF 480
           DSWTFSSMITIYSCSGNVSEAEEMLNEMMEAGFDPNIFVLTSLIQCYGKAKRVDDVVRTF
Sbjct: 421 DSWTFSSMITIYSCSGNVSEAEEMLNEMMEAGFDPNIFVLTSLIQCYGKAKRVDDVVRTF 480

Query: 481 DRLLELGLTPDDRFCGCLLNVITQTPKHELSKLIDCVERANPKLGFVVKLLLGEKDMEGD 540
           DRLLELGLTPDDRFCGCLLNVITQTPKHELSKLIDCVERANPKLGFVVKLLLGEKDMEGD
Sbjct: 481 DRLLELGLTPDDRFCGCLLNVITQTPKHELSKLIDCVERANPKLGFVVKLLLGEKDMEGD 540

Query: 541 FRTEASELFSVVSDDVRKAYCNCLIDLCVNLDLLDKACELLDLGLSVQIYTDLQSRSPTQ 600
           FRTEASELFSVVSDDVRKAYCNCLIDLCVNLDLLDKACELLDLGLSVQIYTDLQSRSPTQ
Sbjct: 541 FRTEASELFSVVSDDVRKAYCNCLIDLCVNLDLLDKACELLDLGLSVQIYTDLQSRSPTQ 600

Query: 601 WSLYLKGLSLGAALTALHVWINDLTKELKSGEELPPLLGINTGHGKHKYSDKGLSSVFES 660
           WSLYLKGLSLGAALTALHVWINDLTKELKSGEELPPLLGINTGHGKHKYSDKGLSSVFES
Sbjct: 601 WSLYLKGLSLGAALTALHVWINDLTKELKSGEELPPLLGINTGHGKHKYSDKGLSSVFES 660

Query: 661 HLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRGSPELVAA 702
           HLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRGSPELVAA
Sbjct: 661 HLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRGSPELVAA 701

[Close]

BLAST of CmoCh13G003960 vs. NCBI nr
Match: XP_022973114.1 (pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Cucurbita maxima])

HSP 1 Score: 1377.5 bits (3564), Expect = 0.0e+00
Identity = 685/701 (97.72%), Postives = 692/701 (98.72%), Query Frame = 0


Query: 1   MAFQLSHFPSTFFTDHNSLTFHYKTTLCKSFSRVFKLNPIPYHSKPFLQITNVSQQEYAP 60
           MAFQLSHFP TFFTDHNSLTFH KTTLCKS SRVFKLNPIPYHSKPFLQITNVSQQEYAP
Sbjct: 1   MAFQLSHFPYTFFTDHNSLTFHSKTTLCKSSSRVFKLNPIPYHSKPFLQITNVSQQEYAP 60

Query: 61  QETRNPSPSDDEISKFPDGKSGSSSKTSVWVNPSSPRASKLRKQSYEARYASLKKISESL 120
           QETRNPSPSDDEISKFPDGKSGSSSKTSVWVNPSSPRASKLRKQSYEARYASLKKISESL
Sbjct: 61  QETRNPSPSDDEISKFPDGKSGSSSKTSVWVNPSSPRASKLRKQSYEARYASLKKISESL 120

Query: 121 DSCNPCEVDVADVLKRIDSKILEQDAIGVLNNMSNSQTALLVHRYFQDVLKSSKQAVFYN 180
           DSCNPCE DVADVLKRID KILEQDAIGVLNNMSNSQTALLV RYFQDVLKSSKQAVFYN
Sbjct: 121 DSCNPCEDDVADVLKRIDRKILEQDAIGVLNNMSNSQTALLVLRYFQDVLKSSKQAVFYN 180

Query: 181 VTLKVFRKCRDFEGAEKLFDEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEKMPSF 240
           VTLKVFRKC+DFEGAEKLFDEML+RGVKPDNVTFSTIISCARLCSLPNKAVEWFEKMPSF
Sbjct: 181 VTLKVFRKCKDFEGAEKLFDEMLKRGVKPDNVTFSTIISCARLCSLPNKAVEWFEKMPSF 240

Query: 241 DCNPDNITYSGMIDAYGRAGNVDMAFSLYDRARTENWRIDLSTFSTMIKIHGVAGNYDGC 300
           DCNPD+ITYSGMIDAYGRAGNVDMAFSLYDRARTENWRIDLSTFSTMIKIHGVAGNYDGC
Sbjct: 241 DCNPDDITYSGMIDAYGRAGNVDMAFSLYDRARTENWRIDLSTFSTMIKIHGVAGNYDGC 300

Query: 301 LNVYEEMKAVGIKPNLAIYNSLLAAMGRAKRPWQIKTIYKEMTKNGFSPSWATYASLLRA 360
           LNVYEEMKAVGIKPNLAIYNSLLAAMGRAKRPWQIKTIY+EM KNGFSPSWATYASLLRA
Sbjct: 301 LNVYEEMKAVGIKPNLAIYNSLLAAMGRAKRPWQIKTIYREMIKNGFSPSWATYASLLRA 360

Query: 361 YARARYAEDGMLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAIEVFKDMKSSGTCSP 420
           YARARYAEDGMLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAIEVFKDMKSSGTCSP
Sbjct: 361 YARARYAEDGMLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAIEVFKDMKSSGTCSP 420

Query: 421 DSWTFSSMITIYSCSGNVSEAEEMLNEMMEAGFDPNIFVLTSLIQCYGKAKRVDDVVRTF 480
           DSWTFSSMITIYSCSGNVSEAEEMLNEMMEAGFDPNIFVLTSLIQCYGKAKRVDDVVRTF
Sbjct: 421 DSWTFSSMITIYSCSGNVSEAEEMLNEMMEAGFDPNIFVLTSLIQCYGKAKRVDDVVRTF 480

Query: 481 DRLLELGLTPDDRFCGCLLNVITQTPKHELSKLIDCVERANPKLGFVVKLLLGEKDMEGD 540
           DRLLELGLTPDDRFCGCLLNVITQTPKHELSKLIDCVERANPKLGF+V+LL+GEKDMEGD
Sbjct: 481 DRLLELGLTPDDRFCGCLLNVITQTPKHELSKLIDCVERANPKLGFMVRLLVGEKDMEGD 540

Query: 541 FRTEASELFSVVSDDVRKAYCNCLIDLCVNLDLLDKACELLDLGLSVQIYTDLQSRSPTQ 600
           FRTEASELFSVVSDDVRKAYCNCLIDLCVNLDLLDKACELLDLGLSVQIYTDLQSRS TQ
Sbjct: 541 FRTEASELFSVVSDDVRKAYCNCLIDLCVNLDLLDKACELLDLGLSVQIYTDLQSRSTTQ 600

Query: 601 WSLYLKGLSLGAALTALHVWINDLTKELKSGEELPPLLGINTGHGKHKYSDKGLSSVFES 660
           WSLYLKGLSLGAALTALHVWINDLTKELKSGEELPPLLGINTGHGKHKYSDKGLSSVFES
Sbjct: 601 WSLYLKGLSLGAALTALHVWINDLTKELKSGEELPPLLGINTGHGKHKYSDKGLSSVFES 660

Query: 661 HLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRGSPELVAA 702
           HLKELNAPFHEAPEKVGWFLTTKVAAKSWLESR SPELVAA
Sbjct: 661 HLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 701

[Close]

BLAST of CmoCh13G003960 vs. TAIR 10
Match: AT4G16390.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 911.8 bits (2355), Expect = 3.5e-265
Identity = 448/687 (65.21%), Postives = 550/687 (80.06%), Query Frame = 0


Query: 17  NSLTFHYKTTLCKSFSRVFKLNPIPYHSKPFLQITNVSQQEYAPQETRNPSPSDDEISKF 76
           N L+ + K+T  +SF   +  N   +HS+  LQ T+VS QE  PQ  ++     D     
Sbjct: 22  NLLSVYPKST-PRSFLSSYNPNSSHFHSRNLLQATHVSVQEAIPQSEKSKLVDVDLPIPE 81

Query: 77  PDGKSGSSSKTSVWVNPSSPRASKLRKQSYEARYASLKKISESLDSCNPCEVDVADVLKR 136
           P     ++SK+ VWVNP SPRAS+LR++SY++RY+SL K++ESLD+C P E DV DV+  
Sbjct: 82  P-----TASKSYVWVNPKSPRASQLRRKSYDSRYSSLIKLAESLDACKPNEADVCDVITG 141

Query: 137 IDSKILEQDAIGVLNNMSNSQTALLVHRYFQDVLKSSKQAVFYNVTLKVFRKCRDFEGAE 196
              K+ EQDA+  LNNM+N +TA LV     + +K S++ + YNVT+KVFRK +D E +E
Sbjct: 142 FGGKLFEQDAVVTLNNMTNPETAPLVLNNLLETMKPSREVILYNVTMKVFRKSKDLEKSE 201

Query: 197 KLFDEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEKMPSFDCNPDNITYSGMIDAY 256
           KLFDEMLERG+KPDN TF+TIISCAR   +P +AVEWFEKM SF C PDN+T + MIDAY
Sbjct: 202 KLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAY 261

Query: 257 GRAGNVDMAFSLYDRARTENWRIDLSTFSTMIKIHGVAGNYDGCLNVYEEMKAVGIKPNL 316
           GRAGNVDMA SLYDRARTE WRID  TFST+I+I+GV+GNYDGCLN+YEEMKA+G+KPNL
Sbjct: 262 GRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNL 321

Query: 317 AIYNSLLAAMGRAKRPWQIKTIYKEMTKNGFSPSWATYASLLRAYARARYAEDGMLVYKE 376
            IYN L+ +MGRAKRPWQ K IYK++  NGF+P+W+TYA+L+RAY RARY +D + +Y+E
Sbjct: 322 VIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYRE 381

Query: 377 MKEKGLQLNVILYNTLLAMCADVGYVNEAIEVFKDMKSSGTCSPDSWTFSSMITIYSCSG 436
           MKEKGL L VILYNTLL+MCAD  YV+EA E+F+DMK+  TC PDSWTFSS+IT+Y+CSG
Sbjct: 382 MKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSG 441

Query: 437 NVSEAEEMLNEMMEAGFDPNIFVLTSLIQCYGKAKRVDDVVRTFDRLLELGLTPDDRFCG 496
            VSEAE  L +M EAGF+P +FVLTS+IQCYGKAK+VDDVVRTFD++LELG+TPDDRFCG
Sbjct: 442 RVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPDDRFCG 501

Query: 497 CLLNVITQTPKHELSKLIDCVERANPKLGFVVKLLLGEKDM-EGDFRTEASELFSVVSDD 556
           CLLNV+TQTP  E+ KLI CVE+A PKLG VVK+L+ E++  EG F+ EASEL   +  D
Sbjct: 502 CLLNVMTQTPSEEIGKLIGCVEKAKPKLGQVVKMLVEEQNCEEGVFKKEASELIDSIGSD 561

Query: 557 VRKAYCNCLIDLCVNLDLLDKACELLDLGLSVQIYTDLQSRSPTQWSLYLKGLSLGAALT 616
           V+KAY NCLIDLCVNL+ L++ACE+L LGL   IYT LQS+S TQWSL+LK LSLGAALT
Sbjct: 562 VKKAYLNCLIDLCVNLNKLERACEILQLGLEYDIYTGLQSKSATQWSLHLKSLSLGAALT 621

Query: 617 ALHVWINDLTK-ELKSGEELPPLLGINTGHGKHKYSDKGLSSVFESHLKELNAPFHEAPE 676
           ALHVW+NDL++  L+SGEE PPLLGINTGHGKHKYSDKGL++VFESHLKELNAPFHEAP+
Sbjct: 622 ALHVWMNDLSEAALESGEEFPPLLGINTGHGKHKYSDKGLAAVFESHLKELNAPFHEAPD 681

Query: 677 KVGWFLTTKVAAKSWLESRGSPELVAA 702
           KVGWFLTT VAAK+WLESR S   V+A
Sbjct: 682 KVGWFLTTSVAAKAWLESRRSAGGVSA 702

[Close]

BLAST of CmoCh13G003960 vs. TAIR 10
Match: AT5G46580.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 458.8 bits (1179), Expect = 8.1e-129
Identity = 250/625 (40.00%), Postives = 376/625 (60.16%), Query Frame = 0


Query: 84  SSKTSVWVNPSSPRASKLRKQ-------SYEARYASLKKISESLDSCNPCE-VDVADVLK 143
           S   SVWVNP+ P+ S L  Q       SY  +   L+  +  L+S    E  +   +L 
Sbjct: 86  SKPKSVWVNPTRPKRSVLSLQRQKRSAYSYNPQIKDLRAFALKLNSSIFTEKSEFLSLLD 145

Query: 144 RIDSKILEQDAIGVLNNMSNSQTALLVHRYFQDVLKSS---KQAVFYNVTLKVFRKCRDF 203
            I       +A+ VLN++   Q     H +F  V   S    + +FYNVT+K  R  R F
Sbjct: 146 EIPHPPNRDNALLVLNSLREWQK---THTFFNWVKSKSLFPMETIFYNVTMKSLRFGRQF 205

Query: 204 EGAEKLFDEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEKMPSFDCNPDNITYSGM 263
           +  E++  EM++ GV+ DN+T+STII+CA+ C+L NKA+EWFE+M      PD +TYS +
Sbjct: 206 QLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAI 265

Query: 264 IDAYGRAGNVDMAFSLYDRARTENWRIDLSTFSTMIKIHGVAGNYDGCLNVYEEMKAVGI 323
           +D Y ++G V+   SLY+RA    W+ D   FS + K+ G AG+YDG   V +EMK++ +
Sbjct: 266 LDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDV 325

Query: 324 KPNLAIYNSLLAAMGRAKRPWQIKTIYKEMTKNGFSPSWATYASLLRAYARARYAEDGML 383
           KPN+ +YN+LL AMGRA +P   ++++ EM + G +P+  T  +L++ Y +AR+A D + 
Sbjct: 326 KPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQ 385

Query: 384 VYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAIEVFKDMKSSGTCSPDSWTFSSMITIY 443
           +++EMK K   ++ ILYNTLL MCAD+G   EA  +F DMK S  C PD++++++M+ IY
Sbjct: 386 LWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIY 445

Query: 444 SCSGNVSEAEEMLNEMMEAGFDPNIFVLTSLIQCYGKAKRVDDVVRTFDRLLELGLTPDD 503
              G   +A E+  EM++AG   N+   T L+QC GKAKR+DDVV  FD  ++ G+ PDD
Sbjct: 446 GSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDD 505

Query: 504 RFCGCLLNVITQTPKHE-LSKLIDCVERANPKLGFVVKLLLGEKDMEGDFRTEASELFSV 563
           R CGCLL+V+      E   K++ C+ERAN KL   V L++ EK      + E   + + 
Sbjct: 506 RLCGCLLSVMALCESSEDAEKVMACLERANKKLVTFVNLIVDEKTEYETVKEEFKLVINA 565

Query: 564 VSDDVRKAYCNCLIDLCVNLDLLDKACELLDLGLSVQIYTDLQSRSPTQWSLYLKGLSLG 623
              + R+ +CNCLID+C   +  ++A ELL LG    +Y  L +++  +WSL ++ LS+G
Sbjct: 566 TQVEARRPFCNCLIDICRGNNRHERAHELLYLGTLFGLYPGLHNKTIKEWSLDVRSLSVG 625

Query: 624 AALTALHVWINDLTKELKSGEELPPLLGINTGHGKHKYSDKGLSSVFESHLKELNAPFHE 683
           AA TAL  W+  L   +K  EELP L    TG G H++S +GL++ F  HL++L+APF +
Sbjct: 626 AAETALEEWMRTLANIIKRQEELPELFLAQTGTGTHRFS-QGLANSFALHLQQLSAPFRQ 685

Query: 684 APEKVGWFLTTKVAAKSWLESRGSP 697
           + ++ G F+ TK    SWLES+  P
Sbjct: 686 S-DRPGIFVATKEDLVSWLESKFPP 705

[Close]

BLAST of CmoCh13G003960 vs. TAIR 10
Match: AT2G31400.1 (genomes uncoupled 1 )

HSP 1 Score: 190.7 bits (483), Expect = 4.1e-48
Identity = 143/569 (25.13%), Postives = 274/569 (48.15%), Query Frame = 0


Query: 162 VHRYFQDVLKSSKQ--AVFYNVTLKVFRKCRDFEGAEKLFDEMLERGVKPDNVTFSTIIS 221
           V ++F ++ ++  Q   + +N  L V  +   +E A  LFDEM  R ++ D  +++T++ 
Sbjct: 323 VAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLD 382

Query: 222 CARLCSLPNKAVEWFEKMPSFDCNPDNITYSGMIDAYGRAGNVDMAFSLYDRARTENWRI 281
                   + A E   +MP     P+ ++YS +ID + +AG  D A +L+   R     +
Sbjct: 383 AICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIAL 442

Query: 282 DLSTFSTMIKIHGVAGNYDGCLNVYEEMKAVGIKPNLAIYNSLLAAMGRAKRPWQIKTIY 341
           D  +++T++ I+   G  +  L++  EM +VGIK ++  YN+LL   G+  +  ++K ++
Sbjct: 443 DRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVF 502

Query: 342 KEMTKNGFSPSWATYASLLRAYARARYAEDGMLVYKEMKEKGLQLNVILYNTLLAMCADV 401
            EM +    P+  TY++L+  Y++    ++ M +++E K  GL+ +V+LY+ L+      
Sbjct: 503 TEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKN 562

Query: 402 GYVNEAIEVFKDMKSSGTCSPDSWTFSSMITIYSCSGNVSEAEEMLNEMMEAGFDPNIFV 461
           G V  A+ +  +M   G  SP+  T++S+I  +  S  +  + +  N          +  
Sbjct: 563 GLVGSAVSLIDEMTKEG-ISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSA 622

Query: 462 LTS-----LIQCYGK----------------AKRVDDVVRTFDRLLELGLTPDDRFCGCL 521
           LT      +IQ +G+                 + +  ++  F ++ +L + P+      +
Sbjct: 623 LTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAI 682

Query: 522 LNVITQTPKHE-LSKLIDCVERANPKL-GFVVKLLLGEKDMEGDFRTEASELFSVVSD-- 581
           LN  ++    E  S L++ +   + K+ G V  LL+G+++   +   +A  LF  V++  
Sbjct: 683 LNACSRCNSFEDASMLLEELRLFDNKVYGVVHGLLMGQRE---NVWLQAQSLFDKVNEMD 742

Query: 582 -DVRKAYCNCLIDLCVNLDLLDKACELLDL-GLSVQIYTDLQSRSPTQWSLYLKGLSLGA 641
                A+ N L D+  +     +  EL+ L G S Q++ ++ S S     L L  +S GA
Sbjct: 743 GSTASAFYNALTDMLWHFG-QKRGAELVALEGRSRQVWENVWSDS----CLDLHLMSSGA 802

Query: 642 ALTALHVWINDLTKELKSGEELPPLLGINTGHGKHK--YSDKGLSSVFESHLKELNAPFH 700
           A   +H W+ ++   +  G ELP +L I TG GKH     D  L    E  L+ ++APFH
Sbjct: 803 ARAMVHAWLLNIRSIVYEGHELPKVLSILTGWGKHSKVVGDGALRRAVEVLLRGMDAPFH 862

[Close]

BLAST of CmoCh13G003960 vs. TAIR 10
Match: AT5G02860.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 169.1 bits (427), Expect = 1.3e-41
Identity = 89/319 (27.90%), Postives = 164/319 (51.41%), Query Frame = 0


Query: 173 SKQAVFYNVTLKVFRKCRDFEGAEKLFDEMLERGVKPDNVTFSTIISCARLCSLPNKAVE 232
           S   V YN  L V+ K    + A K+ +EM+  G  P  VT++++IS      + ++A+E
Sbjct: 311 SYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAME 370

Query: 233 WFEKMPSFDCNPDNITYSGMIDAYGRAGNVDMAFSLYDRARTENWRIDLSTFSTMIKIHG 292
              +M      PD  TY+ ++  + RAG V+ A S+++  R    + ++ TF+  IK++G
Sbjct: 371 LKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYG 430

Query: 293 VAGNYDGCLNVYEEMKAVGIKPNLAIYNSLLAAMGRAKRPWQIKTIYKEMTKNGFSPSWA 352
             G +   + +++E+   G+ P++  +N+LLA  G+     ++  ++KEM + GF P   
Sbjct: 431 NRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERE 490

Query: 353 TYASLLRAYARARYAEDGMLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAIEVFKDM 412
           T+ +L+ AY+R    E  M VY+ M + G+  ++  YNT+LA  A  G   ++ +V  +M
Sbjct: 491 TFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEM 550

Query: 413 KSSGTCSPDSWTFSSMITIYSCSGNVSEAEEMLNEMMEAGFDPNIFVLTSLIQCYGKAKR 472
           +  G C P+  T+ S++  Y+    +     +  E+     +P   +L +L+    K   
Sbjct: 551 E-DGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDL 610

Query: 473 VDDVVRTFDRLLELGLTPD 492
           + +  R F  L E G +PD
Sbjct: 611 LPEAERAFSELKERGFSPD 628

[Close]

BLAST of CmoCh13G003960 vs. TAIR 10
Match: AT1G18900.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 163.3 bits (412), Expect = 7.0e-40
Identity = 114/516 (22.09%), Postives = 238/516 (46.12%), Query Frame = 0


Query: 184 KVFRKCRDFEGAEKLFDEMLER-GVKPDNVTFSTIISCARLCSLPNKAVEWFEKMPSFDC 243
           +V ++  D+  A   F  +  + G K D  T++T++             +  ++M    C
Sbjct: 336 QVLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGC 395

Query: 244 NPDNITYSGMIDAYGRAGNVDMAFSLYDRARTENWRIDLSTFSTMIKIHGVAGNYDGCLN 303
            P+ +TY+ +I +YGRA  ++ A +++++ +    + D  T+ T+I IH  AG  D  ++
Sbjct: 396 QPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMD 455

Query: 304 VYEEMKAVGIKPNLAIYNSLLAAMGRAKRPWQIKTIYKEMTKNGFSPSWATYASLLRAYA 363
           +Y+ M+A G+ P+   Y+ ++  +G+A        ++ EM   G +P+  TY  ++  +A
Sbjct: 456 MYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHA 515

Query: 364 RARYAEDGMLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAIEVFKDMKSSGTCSPDS 423
           +AR  ++ + +Y++M+  G + + + Y+ ++ +    GY+ EA  VF +M+      PD 
Sbjct: 516 KARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI-PDE 575

Query: 424 WTFSSMITIYSCSGNVSEAEEMLNEMMEAGFDPNIFVLTSLIQCYGKAKRVDDVVRTFDR 483
             +  ++ ++  +GNV +A +    M+ AG  PN+    SL+  + +  ++ +       
Sbjct: 576 PVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQN 635

Query: 484 LLELGLTPDDRFCGCLLNVITQ-TPKHELSKLIDCV-ERANPKLGFVVKLLLGEKDMEGD 543
           +L LGL P  +    LL+  T    K ++      +    +P   F++K+     D E +
Sbjct: 636 MLALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGE-N 695

Query: 544 FRTEASELFSVVSDDVR---KAYCNCLIDLCVNLDLLDKACELLDLGLSVQIYTD-LQSR 603
            R  A+    ++  + R   +   + ++D        ++A  + ++     ++ D L+ +
Sbjct: 696 VRNHANNFLDLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGSVWEVAAQKNVFPDALREK 755

Query: 604 SPTQWSLYLKGLSLGAALTALHVWINDLTKELKSGEELPPLLGINTGHGKHK--YSDKGL 663
           S + W + L  +S G A+TAL   +    K++ +    P  + I TG G+         +
Sbjct: 756 SCSYWLINLHVMSEGTAVTALSRTLAWFRKQMLASGTCPSRIDIVTGWGRRSRVTGTSMV 815

Query: 664 SSVFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWL 691
               E  L    +PF       G F+ +      WL
Sbjct: 816 RQAVEELLNIFGSPFFTESGNSGCFVGSGEPLNRWL 849

The following BLAST results are available for this feature:

BLAST of CmoCh13G003960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GWE0	4.9e-264	65.21	Pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Arabidop...	[more]
B4F8Z1	5.9e-201	54.95	Pentatricopeptide repeat-containing protein ATP4, chloroplastic OS=Zea mays OX=4...	[more]
Q10PZ4	7.7e-201	53.56	Pentatricopeptide repeat-containing protein ATP4 homolog, chloroplastic OS=Oryza...	[more]
Q9LS25	1.1e-127	40.00	Pentatricopeptide repeat-containing protein At5g46580, chloroplastic OS=Arabidop...	[more]
Q9SIC9	5.8e-47	25.13	Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidop...	[more]

BLAST of CmoCh13G003960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EHV4	0.0e+00	100.00	pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Cucurbit...	[more]
A0A6J1IDL0	0.0e+00	97.72	pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Cucurbit...	[more]
A0A5A7TLM5	0.0e+00	87.38	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3CL39	0.0e+00	87.38	pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Cucumis ...	[more]
A0A0A0LVP1	0.0e+00	86.95	Smr domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G173140 PE=3 SV...	[more]

BLAST of CmoCh13G003960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022927501.1	0.0e+00	100.00	pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Cucurbita ...	[more]
KAG6583722.1	0.0e+00	99.57	Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a...	[more]
KAG7019368.1	0.0e+00	99.00	Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a...	[more]
XP_023520706.1	0.0e+00	98.86	pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Cucurbita ...	[more]
XP_022973114.1	0.0e+00	97.72	pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Cucurbita ...	[more]

BLAST of CmoCh13G003960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16390.1	3.5e-265	65.21	pentatricopeptide (PPR) repeat-containing protein	[more]
AT5G46580.1	8.1e-129	40.00	pentatricopeptide (PPR) repeat-containing protein	[more]
AT2G31400.1	4.1e-48	25.13	genomes uncoupled 1	[more]
AT5G02860.1	1.3e-41	27.90	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G18900.1	7.0e-40	22.09	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002625	Smr domain	SMART	SM00463	SMR_2	coord: 600..690 e-value: 8.7E-14 score: 61.8
IPR002625	Smr domain	PROSITE	PS50828	SMR	coord: 603..687 score: 17.373562
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 368..519 e-value: 2.1E-37 score: 131.2 coord: 261..367 e-value: 4.0E-24 score: 87.6
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 110..256 e-value: 1.1E-24 score: 88.7
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 424..456 e-value: 7.6E-8 score: 30.1 coord: 283..315 e-value: 1.2E-6 score: 26.2 coord: 247..280 e-value: 7.7E-7 score: 26.9 coord: 460..491 e-value: 8.1E-6 score: 23.7 coord: 353..385 e-value: 1.4E-6 score: 26.1 coord: 318..351 e-value: 5.3E-4 score: 18.0 coord: 212..245 e-value: 0.0016 score: 16.4 coord: 179..210 e-value: 1.8E-6 score: 25.8 coord: 388..421 e-value: 2.6E-6 score: 25.2
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 460..488 e-value: 0.0035 score: 17.5 coord: 424..453 e-value: 8.9E-7 score: 28.7
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 176..220 e-value: 1.7E-11 score: 44.1
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 315..349 score: 10.292718
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 421..455 score: 11.936913
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 175..209 score: 11.246351
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 350..384 score: 10.500983
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 210..244 score: 8.6266
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 245..279 score: 10.39137
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 456..490 score: 10.599635
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 280..314 score: 10.884628
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 385..419 score: 10.818861
IPR033443	Pentacotripeptide-repeat region of PRORP	PFAM	PF17177	PPR_long	coord: 253..401 e-value: 4.6E-14 score: 52.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..96
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 78..96
None	No IPR available	PANTHER	PTHR47447:SF8	PENTATRICOPEPTIDE REPEAT PROTEIN-RELATED	coord: 47..700
None	No IPR available	PANTHER	PTHR47447	OS03G0856100 PROTEIN	coord: 47..700
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 256..487

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh13G003960.1	CmoCh13G003960.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0031425	chloroplast RNA processing
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0009570	chloroplast stroma
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0005515	protein binding