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CmoCh13G003100 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCACATAATGGAGAAGCAGTACCACCAGTTCCAGATCTTAATACAACCATTCTTCAAGCAATTCAAGGTATGATGAAAATGATGATGGAAGATAGACAAGAAAGAAGGGCGCAACAACAAAGACAAGAACGAACATTACAAGAAGATGAAGGTATAGTAGTACAAGAAAGACAAGTTGATGGTAGATGGAGAGGAAGAAATAACCATGCAACTATTATGCAACCTAGAAGGATGGAAAGAGTACATGAAGATAGAGATGGGGGAGTTAAACTCAAAATCCCGCCCTTTTGTGGAACGGCAGATTCTGAGGCATACTTGCAGTGGGAAAGAAAGATAGAGCATGTGTTTGATTGCAACACCTATAGTGAAAATAAGAAGATGAGACTTGCTATTGCCGAATTTACCAATCATGCTAGTGATTGGTACCAACATCTCAAATCCGAGAGAAGAAGAAAAGAGGAGAATCCAATAGAGACATGGGAAGAACTTAAAGAAGTCATGAGAAAAAGGTATGCTCCAAAACATTATGAAAGAAATTTGAAAACTAAATTGCAAGGTTTGAGGCAAGGAACAAAAAGTGTGGCGGAATATTATCAAGAGATGGAAACTATGATGAAAAGAGCAAAGGTTAGAGAAGAAGAAGAAGATACCATGTCTAGATTCCTTGGAGGTTTGAATCGAGAAATTGCTCATCTTGTTGACAGAAATCCACCACCATATCTGGAAGATATGTATCATTATGCTCTCAAAATTGAAGACCAATTGAAGGAAGAAAAAGAGCATTCAAAAAGGTACACATCACGAACTAGCATCTTTTCAAATTCTAATACTTGGAACAAGGATAGTTTTATGAATAAAAATGATTCGATGTCACCAAAAGGAAAGTTTGTGACTGCTAAAAGAGTGGAGGCTGAGAGTTTCAATGGTAAAATGAATGAAGCTTCAAAGACGGTAAAAGAGAAGTCTAGTTCTATTCAATGTTGGAAGTGCAAAGGATTTGGACACATGAGCAAAGAGTGTGTTAATGAAAAAGTTATGGTGATAAGGAATGGTATACTTGATTCAGATGATGAATGTGAGGATCATGATTCACAGCTTGTGGAAGAAATCGCCGCATATGATGATGAGTATGTTGAAGAAGGTAATTCCATATCTTTGATCACAAGAAAGGTACTCAATGTTCAAATCAAGGGAGAGAAATTTGAATATCAAAGGGAAAACTTGTTCCACACAAGATGTTTGATCAAAGCAAACCCATGCAGCTTGCTGATTGATGATAGTGGAAGTTGCACGAATGTGGTAAGCAGTTTCCTTGTAAAAAGACTTCAACTTTCTGTCTATCCACATCCAAAACCATACAAACTTCATTGGTTAACAAACAAAGAAGAAATTAAGGTGAATTCCCAAGCTCTTATTTCTTTTACTCTTGGAAGATATAAAGATGAAGTTCTTTATGATGTCGTACCAATGCATGCGGGGGACATCTTTATCGGCCGACCTTGGCAATATGATAGAAAGGTAACATTTGATGGTTTCATGAACAAGTATACTTTTACTTTGTGTGGGAAGAAATTTACTTTACTTCCATTGTCTCCATATGAAGTACATTGTGACCAATTGAAATTAGAGAAAAAAAGAACAGAATCTGAAGAACAACAGTGGAGAGAAGAAACTAAGGTAAAGGGGAGAAAAAAAAGTGAGAAAAAAAAAATTCAGTTCTTGTCCGGAAAGAACGATGAATTTGATTTGAGGACAAATCCTTTTAAAGAAAGGGGGGATGATATGAATCCAACAACTGATCACGTGCATGTACCCGAAGGACCGATTACAAGAAGCAAGGTTAAGAAGATTCAAGAGGCCTATACATTGCATCTTCAAAAGCTAGCTAGTGTACCGGTTGAAACAAGGACTTTTGTGTCCAAAAATCTTTATAGCATTCGCATATCAAATCAAGAAGATAATGGAGTGGCTGATATTGGAAAATAATTAGAAGACTTGCCTTTGGTAGTTGAATTACCAATTAAGGAAATTATTAATGCTTTATTTGCTTCCTTTTATATTTAATAGCATTTATTAATAGTTTGTATGAATTGCCTTATATTCTTCAATTTGTATTTAATAGCATTTATTAGTGATTGGTGGCTGAACCATATTATGTAAGGGTTACCTTTTAGACCTATTTAAAGGCATGTAATACTCATGTTTGAGAGATTTTAGTTGAATACAGAAAAAACCTTTGTGTTTTCTTGATACCCTTTTGGTGTTATTCTTTTTCAAATCTTGCTTTAGGTTTGATGTTTAAACCGATTCATTGAATTAGTTTTGATCAAGCTAATTCTGGAGTGAATTGTCTTGGTATCTAAGAGTGACCATCATAGATTCCAAGTTCGATCTAAGAGTCATTCATCTTCTAACCAGCTCTTGGTTGGAATCAATCCGTTAAGTTAGCTTCCTCTGTGAGCGTTTTGCAAGGATTCTAGAAGGACCTCTAGCTTTGCAAATTCCAGCATTGTAGGCGCTTATCATATGTCCTAGAATCGAGACGTGAGCAAAACTCAGAAGAAGTGTGGGTGAACACGGCCAGCCAGGGAGGAAAGAAAAGGGAGGGGGGAAAGCCTTAGCCCTGAGAATCAAACGTGGCGCTGCTGGATGCTTCTAATCAATAATTGGTGAAGAGGTCCGTGGGTTCCCTTTCTTTATTGGTTGGAACTATCTTTCTATTTCTTTTTCTTTTGAATCGAATTGGTCAGGGGCTCTTTCTTTTACCTTGGAAAATCAATCATACAGTTACCTCACAGAGAGTTAGCTGCAACCACAAATGAGATAAATACTACTCTTGCTTTAGCTTTACTCACATCAGTAGCATATTTCTATGCCGGTCTTAGCTAAAAAGGATTATGAAGGTCTTTCGGGAAATACATTCAACCAACTACAATCCTTTTACCACCCATTAGCACATCTTAGAAGATTGAACAAAACCCCCTTATCACTTTGTTTTCTATCTACTTGTTGGAAATATATTAGCTGATGAATTAGTAGTAGTTGTTCTTGTTTCTTTAGTACATTTAGTAGTTCCTATACCAGTATAGGTCCTTAAATACAAGTGGTATTCAAGCTCTGATTTTAGCAACTTTAGCTGCGGCTTATATAGGCGAATCCATGGAGGGGCATCATTGATTAGTTTTCGAAATAGTCTTTTGGTTTTATCTTAGACCAAGGCAATGTATACATGGCTCAAGATAATCTAGGGAACATAAATATACAAAGAATTTTCAAATACAGAAGAGATATATACTATCTAGGGAATCAGAGTAATAGTAAACCAAAGATTGCGCTATTCCTATTCTTCAGGAATTGTCTGTCAAAAAAGGAAAGAGATCTCAACACTTTTTCCTCTCAACGATTGAACAAAAGAAAAAAAAAAGCAGAAATTACACTTAGCTTAGATTAAGAAAATCTTGATATTTCTAGGCTATGCAAGGATTCGGACTAAACTAATTCATTTGTCCATTTAGATTGATTGTCTACATGTGGGTGGGATAATTCTAAAGAAAAAGGGGGACAAAGAGAAAAAAGGATTGGTTAGGGTAGAGTGGAGTCTACTAGATGTATTGAATCGAATTGCTATAAGACAACCCTTGCCTATGGATGTTTCGAAGAATGATTACAGAACTAGAATTGGAATCCATGAATAATGAATTGGTTTACGTTAGGGAAGAAAGACATGTATATGCTCTACTATATTAGATAGAGACTAGTTATATAGGAACTCAAGATATATCTAATCCCCGCCCGCCCTACTACTGTGAGTTTAGATAGGGCTTGCAATGGGAGTCCTTCCGTTTCCTTCCTCTGTCAGATTCAATCAAGAACAAAGAATGAAGCTTTAGAAAAAAGAAAGAGCAGAACAGCAGAACAAGAGTTGTATGGATTCACAAAAACTACGGGGGTGGATAGGAAAAAGAGAGATTGAAATAGTTTGGACAATTCAATATCCATAAGATTCTAACTTACTTCTTTTTATCAGGATAAATCTTAGCGATGGAATAATCAGTGATATGAGAATGAATTGGTTGATCGTCTGTCTCATTAATCATTTCTTTCTTTTGGTGTTAGGAACTTATTATGAATCCACTGATTTCTTCCGCTTCCGTTATTGCTGCTGGATTGGCCGGCGGGCTTGCTTCTATTGGACCTGGGGTTGGTCAAGGTACTGCTGCAGGCTAA ATGTCACATAATGGAGAAGCAGTACCACCAGTTCCAGATCTTAATACAACCATTCTTCAAGCAATTCAAGGTATGATGAAAATGATGATGGAAGATAGACAAGAAAGAAGGGCGCAACAACAAAGACAAGAACGAACATTACAAGAAGATGAAGGTATAGTAGTACAAGAAAGACAAGTTGATGGTAGATGGAGAGGAAGAAATAACCATGCAACTATTATGCAACCTAGAAGGATGGAAAGAGTACATGAAGATAGAGATGGGGGAGTTAAACTCAAAATCCCGCCCTTTTGTGGAACGGCAGATTCTGAGGCATACTTGCAGTGGGAAAGAAAGATAGAGCATGTGTTTGATTGCAACACCTATAGTGAAAATAAGAAGATGAGACTTGCTATTGCCGAATTTACCAATCATGCTAGTGATTGGTACCAACATCTCAAATCCGAGAGAAGAAGAAAAGAGGAGAATCCAATAGAGACATGGGAAGAACTTAAAGAAGTCATGAGAAAAAGGTATGCTCCAAAACATTATGAAAGAAATTTGAAAACTAAATTGCAAGGTTTGAGGCAAGGAACAAAAAGTGTGGCGGAATATTATCAAGAGATGGAAACTATGATGAAAAGAGCAAAGGTTAGAGAAGAAGAAGAAGATACCATGTCTAGATTCCTTGGAGGTTTGAATCGAGAAATTGCTCATCTTGTTGACAGAAATCCACCACCATATCTGGAAGATATGTATCATTATGCTCTCAAAATTGAAGACCAATTGAAGGAAGAAAAAGAGCATTCAAAAAGGTACACATCACGAACTAGCATCTTTTCAAATTCTAATACTTGGAACAAGGATAGTTTTATGAATAAAAATGATTCGATGTCACCAAAAGGAAAGTTTGTGACTGCTAAAAGAGTGGAGGCTGAGAGTTTCAATGGTAAAATGAATGAAGCTTCAAAGACGGTAAAAGAGAAGTCTAGTTCTATTCAATGTTGGAAGTGCAAAGGATTTGGACACATGAGCAAAGAGTGTGTTAATGAAAAAGTTATGGTGATAAGGAATGGTATACTTGATTCAGATGATGAATGTGAGGATCATGATTCACAGCTTGTGGAAGAAATCGCCGCATATGATGATGAGTATGTTGAAGAAGGTAATTCCATATCTTTGATCACAAGAAAGGAACTTATTATGAATCCACTGATTTCTTCCGCTTCCGTTATTGCTGCTGGATTGGCCGGCGGGCTTGCTTCTATTGGACCTGGGGTTGGTCAAGGTACTGCTGCAGGCTAA ATGTCACATAATGGAGAAGCAGTACCACCAGTTCCAGATCTTAATACAACCATTCTTCAAGCAATTCAAGGTATGATGAAAATGATGATGGAAGATAGACAAGAAAGAAGGGCGCAACAACAAAGACAAGAACGAACATTACAAGAAGATGAAGGTATAGTAGTACAAGAAAGACAAGTTGATGGTAGATGGAGAGGAAGAAATAACCATGCAACTATTATGCAACCTAGAAGGATGGAAAGAGTACATGAAGATAGAGATGGGGGAGTTAAACTCAAAATCCCGCCCTTTTGTGGAACGGCAGATTCTGAGGCATACTTGCAGTGGGAAAGAAAGATAGAGCATGTGTTTGATTGCAACACCTATAGTGAAAATAAGAAGATGAGACTTGCTATTGCCGAATTTACCAATCATGCTAGTGATTGGTACCAACATCTCAAATCCGAGAGAAGAAGAAAAGAGGAGAATCCAATAGAGACATGGGAAGAACTTAAAGAAGTCATGAGAAAAAGGTATGCTCCAAAACATTATGAAAGAAATTTGAAAACTAAATTGCAAGGTTTGAGGCAAGGAACAAAAAGTGTGGCGGAATATTATCAAGAGATGGAAACTATGATGAAAAGAGCAAAGGTTAGAGAAGAAGAAGAAGATACCATGTCTAGATTCCTTGGAGGTTTGAATCGAGAAATTGCTCATCTTGTTGACAGAAATCCACCACCATATCTGGAAGATATGTATCATTATGCTCTCAAAATTGAAGACCAATTGAAGGAAGAAAAAGAGCATTCAAAAAGGTACACATCACGAACTAGCATCTTTTCAAATTCTAATACTTGGAACAAGGATAGTTTTATGAATAAAAATGATTCGATGTCACCAAAAGGAAAGTTTGTGACTGCTAAAAGAGTGGAGGCTGAGAGTTTCAATGGTAAAATGAATGAAGCTTCAAAGACGGTAAAAGAGAAGTCTAGTTCTATTCAATGTTGGAAGTGCAAAGGATTTGGACACATGAGCAAAGAGTGTGTTAATGAAAAAGTTATGGTGATAAGGAATGGTATACTTGATTCAGATGATGAATGTGAGGATCATGATTCACAGCTTGTGGAAGAAATCGCCGCATATGATGATGAGTATGTTGAAGAAGGTAATTCCATATCTTTGATCACAAGAAAGGAACTTATTATGAATCCACTGATTTCTTCCGCTTCCGTTATTGCTGCTGGATTGGCCGGCGGGCTTGCTTCTATTGGACCTGGGGTTGGTCAAGGTACTGCTGCAGGCTAA MSHNGEAVPPVPDLNTTILQAIQGMMKMMMEDRQERRAQQQRQERTLQEDEGIVVQERQVDGRWRGRNNHATIMQPRRMERVHEDRDGGVKLKIPPFCGTADSEAYLQWERKIEHVFDCNTYSENKKMRLAIAEFTNHASDWYQHLKSERRRKEENPIETWEELKEVMRKRYAPKHYERNLKTKLQGLRQGTKSVAEYYQEMETMMKRAKVREEEEDTMSRFLGGLNREIAHLVDRNPPPYLEDMYHYALKIEDQLKEEKEHSKRYTSRTSIFSNSNTWNKDSFMNKNDSMSPKGKFVTAKRVEAESFNGKMNEASKTVKEKSSSIQCWKCKGFGHMSKECVNEKVMVIRNGILDSDDECEDHDSQLVEEIAAYDDEYVEEGNSISLITRKELIMNPLISSASVIAAGLAGGLASIGPGVGQGTAAG Homology
BLAST of CmoCh13G003100 vs. ExPASy Swiss-Prot
Match: A8SE66 (ATP synthase subunit c, chloroplastic OS=Ceratophyllum demersum OX=4428 GN=atpH PE=3 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 1.8e-06 Identity = 32/33 (96.97%), Postives = 32/33 (96.97%), Query Frame = 0
BLAST of CmoCh13G003100 vs. ExPASy Swiss-Prot
Match: Q4FGF2 (ATP synthase subunit c, chloroplastic OS=Acorus americanus OX=263995 GN=atpH PE=3 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 3.9e-06 Identity = 31/33 (93.94%), Postives = 32/33 (96.97%), Query Frame = 0
BLAST of CmoCh13G003100 vs. ExPASy Swiss-Prot
Match: Q3V547 (ATP synthase subunit c, chloroplastic OS=Acorus calamus OX=4465 GN=atpH PE=3 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 3.9e-06 Identity = 31/33 (93.94%), Postives = 32/33 (96.97%), Query Frame = 0
BLAST of CmoCh13G003100 vs. ExPASy Swiss-Prot
Match: Q85FN2 (ATP synthase subunit c, chloroplastic OS=Adiantum capillus-veneris OX=13818 GN=atpH PE=2 SV=2) HSP 1 Score: 54.3 bits (129), Expect = 3.9e-06 Identity = 31/33 (93.94%), Postives = 32/33 (96.97%), Query Frame = 0
BLAST of CmoCh13G003100 vs. ExPASy Swiss-Prot
Match: A4QJA2 (ATP synthase subunit c, chloroplastic OS=Aethionema cordifolium OX=434059 GN=atpH PE=3 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 3.9e-06 Identity = 31/33 (93.94%), Postives = 32/33 (96.97%), Query Frame = 0
BLAST of CmoCh13G003100 vs. ExPASy TrEMBL
Match: A0A6J1EVI6 (LOW QUALITY PROTEIN: uncharacterized protein LOC111438459 OS=Cucurbita moschata OX=3662 GN=LOC111438459 PE=4 SV=1) HSP 1 Score: 613.2 bits (1580), Expect = 8.1e-172 Identity = 324/393 (82.44%), Postives = 336/393 (85.50%), Query Frame = 0
BLAST of CmoCh13G003100 vs. ExPASy TrEMBL
Match: A0A5D3DRJ1 (F15O4.13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G00130 PE=4 SV=1) HSP 1 Score: 579.7 bits (1493), Expect = 9.9e-162 Identity = 295/401 (73.57%), Postives = 346/401 (86.28%), Query Frame = 0
BLAST of CmoCh13G003100 vs. ExPASy TrEMBL
Match: A0A5D3C3D3 (F15O4.13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G001490 PE=4 SV=1) HSP 1 Score: 579.7 bits (1493), Expect = 9.9e-162 Identity = 295/401 (73.57%), Postives = 346/401 (86.28%), Query Frame = 0
BLAST of CmoCh13G003100 vs. ExPASy TrEMBL
Match: A0A5D3CK70 (F15O4.13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold304G00110 PE=4 SV=1) HSP 1 Score: 579.7 bits (1493), Expect = 9.9e-162 Identity = 295/401 (73.57%), Postives = 346/401 (86.28%), Query Frame = 0
BLAST of CmoCh13G003100 vs. ExPASy TrEMBL
Match: A0A5D3BWE8 (F15O4.13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1738G00600 PE=4 SV=1) HSP 1 Score: 579.7 bits (1493), Expect = 9.9e-162 Identity = 295/401 (73.57%), Postives = 346/401 (86.28%), Query Frame = 0
BLAST of CmoCh13G003100 vs. NCBI nr
Match: XP_022932136.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111438459, partial [Cucurbita moschata]) HSP 1 Score: 613.2 bits (1580), Expect = 1.7e-171 Identity = 324/393 (82.44%), Postives = 336/393 (85.50%), Query Frame = 0
BLAST of CmoCh13G003100 vs. NCBI nr
Match: TYK22420.1 (Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 579.7 bits (1493), Expect = 2.0e-161 Identity = 295/401 (73.57%), Postives = 346/401 (86.28%), Query Frame = 0
BLAST of CmoCh13G003100 vs. NCBI nr
Match: TYK26105.1 (F15O4.13 [Cucumis melo var. makuwa]) HSP 1 Score: 579.7 bits (1493), Expect = 2.0e-161 Identity = 295/401 (73.57%), Postives = 346/401 (86.28%), Query Frame = 0
BLAST of CmoCh13G003100 vs. NCBI nr
Match: TYK02449.1 (F15O4.13 [Cucumis melo var. makuwa]) HSP 1 Score: 579.7 bits (1493), Expect = 2.0e-161 Identity = 295/401 (73.57%), Postives = 346/401 (86.28%), Query Frame = 0
BLAST of CmoCh13G003100 vs. NCBI nr
Match: TYK11702.1 (F15O4.13 [Cucumis melo var. makuwa]) HSP 1 Score: 579.7 bits (1493), Expect = 2.0e-161 Identity = 295/401 (73.57%), Postives = 346/401 (86.28%), Query Frame = 0
BLAST of CmoCh13G003100 vs. TAIR 10
Match: ATCG00140.1 (ATP synthase subunit C family protein ) HSP 1 Score: 53.9 bits (128), Expect = 3.6e-07 Identity = 30/33 (90.91%), Postives = 32/33 (96.97%), Query Frame = 0
BLAST of CmoCh13G003100 vs. TAIR 10
Match: AT4G07350.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G40129.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 45.8 bits (107), Expect = 9.9e-05 Identity = 23/82 (28.05%), Postives = 41/82 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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