CmoCh13G003100 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh13G003100
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Transposon Ty3-I Gag-Pol polyprotein
Location	Cmo_Chr13: 3338036 .. 3342265 (+)
RNA-Seq Expression	CmoCh13G003100
Synteny	CmoCh13G003100

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCACATAATGGAGAAGCAGTACCACCAGTTCCAGATCTTAATACAACCATTCTTCAAGCAATTCAAGGTATGATGAAAATGATGATGGAAGATAGACAAGAAAGAAGGGCGCAACAACAAAGACAAGAACGAACATTACAAGAAGATGAAGGTATAGTAGTACAAGAAAGACAAGTTGATGGTAGATGGAGAGGAAGAAATAACCATGCAACTATTATGCAACCTAGAAGGATGGAAAGAGTACATGAAGATAGAGATGGGGGAGTTAAACTCAAAATCCCGCCCTTTTGTGGAACGGCAGATTCTGAGGCATACTTGCAGTGGGAAAGAAAGATAGAGCATGTGTTTGATTGCAACACCTATAGTGAAAATAAGAAGATGAGACTTGCTATTGCCGAATTTACCAATCATGCTAGTGATTGGTACCAACATCTCAAATCCGAGAGAAGAAGAAAAGAGGAGAATCCAATAGAGACATGGGAAGAACTTAAAGAAGTCATGAGAAAAAGGTATGCTCCAAAACATTATGAAAGAAATTTGAAAACTAAATTGCAAGGTTTGAGGCAAGGAACAAAAAGTGTGGCGGAATATTATCAAGAGATGGAAACTATGATGAAAAGAGCAAAGGTTAGAGAAGAAGAAGAAGATACCATGTCTAGATTCCTTGGAGGTTTGAATCGAGAAATTGCTCATCTTGTTGACAGAAATCCACCACCATATCTGGAAGATATGTATCATTATGCTCTCAAAATTGAAGACCAATTGAAGGAAGAAAAAGAGCATTCAAAAAGGTACACATCACGAACTAGCATCTTTTCAAATTCTAATACTTGGAACAAGGATAGTTTTATGAATAAAAATGATTCGATGTCACCAAAAGGAAAGTTTGTGACTGCTAAAAGAGTGGAGGCTGAGAGTTTCAATGGTAAAATGAATGAAGCTTCAAAGACGGTAAAAGAGAAGTCTAGTTCTATTCAATGTTGGAAGTGCAAAGGATTTGGACACATGAGCAAAGAGTGTGTTAATGAAAAAGTTATGGTGATAAGGAATGGTATACTTGATTCAGATGATGAATGTGAGGATCATGATTCACAGCTTGTGGAAGAAATCGCCGCATATGATGATGAGTATGTTGAAGAAGGTAATTCCATATCTTTGATCACAAGAAAGGTACTCAATGTTCAAATCAAGGGAGAGAAATTTGAATATCAAAGGGAAAACTTGTTCCACACAAGATGTTTGATCAAAGCAAACCCATGCAGCTTGCTGATTGATGATAGTGGAAGTTGCACGAATGTGGTAAGCAGTTTCCTTGTAAAAAGACTTCAACTTTCTGTCTATCCACATCCAAAACCATACAAACTTCATTGGTTAACAAACAAAGAAGAAATTAAGGTGAATTCCCAAGCTCTTATTTCTTTTACTCTTGGAAGATATAAAGATGAAGTTCTTTATGATGTCGTACCAATGCATGCGGGGGACATCTTTATCGGCCGACCTTGGCAATATGATAGAAAGGTAACATTTGATGGTTTCATGAACAAGTATACTTTTACTTTGTGTGGGAAGAAATTTACTTTACTTCCATTGTCTCCATATGAAGTACATTGTGACCAATTGAAATTAGAGAAAAAAAGAACAGAATCTGAAGAACAACAGTGGAGAGAAGAAACTAAGGTAAAGGGGAGAAAAAAAAGTGAGAAAAAAAAAATTCAGTTCTTGTCCGGAAAGAACGATGAATTTGATTTGAGGACAAATCCTTTTAAAGAAAGGGGGGATGATATGAATCCAACAACTGATCACGTGCATGTACCCGAAGGACCGATTACAAGAAGCAAGGTTAAGAAGATTCAAGAGGCCTATACATTGCATCTTCAAAAGCTAGCTAGTGTACCGGTTGAAACAAGGACTTTTGTGTCCAAAAATCTTTATAGCATTCGCATATCAAATCAAGAAGATAATGGAGTGGCTGATATTGGAAAATAATTAGAAGACTTGCCTTTGGTAGTTGAATTACCAATTAAGGAAATTATTAATGCTTTATTTGCTTCCTTTTATATTTAATAGCATTTATTAATAGTTTGTATGAATTGCCTTATATTCTTCAATTTGTATTTAATAGCATTTATTAGTGATTGGTGGCTGAACCATATTATGTAAGGGTTACCTTTTAGACCTATTTAAAGGCATGTAATACTCATGTTTGAGAGATTTTAGTTGAATACAGAAAAAACCTTTGTGTTTTCTTGATACCCTTTTGGTGTTATTCTTTTTCAAATCTTGCTTTAGGTTTGATGTTTAAACCGATTCATTGAATTAGTTTTGATCAAGCTAATTCTGGAGTGAATTGTCTTGGTATCTAAGAGTGACCATCATAGATTCCAAGTTCGATCTAAGAGTCATTCATCTTCTAACCAGCTCTTGGTTGGAATCAATCCGTTAAGTTAGCTTCCTCTGTGAGCGTTTTGCAAGGATTCTAGAAGGACCTCTAGCTTTGCAAATTCCAGCATTGTAGGCGCTTATCATATGTCCTAGAATCGAGACGTGAGCAAAACTCAGAAGAAGTGTGGGTGAACACGGCCAGCCAGGGAGGAAAGAAAAGGGAGGGGGGAAAGCCTTAGCCCTGAGAATCAAACGTGGCGCTGCTGGATGCTTCTAATCAATAATTGGTGAAGAGGTCCGTGGGTTCCCTTTCTTTATTGGTTGGAACTATCTTTCTATTTCTTTTTCTTTTGAATCGAATTGGTCAGGGGCTCTTTCTTTTACCTTGGAAAATCAATCATACAGTTACCTCACAGAGAGTTAGCTGCAACCACAAATGAGATAAATACTACTCTTGCTTTAGCTTTACTCACATCAGTAGCATATTTCTATGCCGGTCTTAGCTAAAAAGGATTATGAAGGTCTTTCGGGAAATACATTCAACCAACTACAATCCTTTTACCACCCATTAGCACATCTTAGAAGATTGAACAAAACCCCCTTATCACTTTGTTTTCTATCTACTTGTTGGAAATATATTAGCTGATGAATTAGTAGTAGTTGTTCTTGTTTCTTTAGTACATTTAGTAGTTCCTATACCAGTATAGGTCCTTAAATACAAGTGGTATTCAAGCTCTGATTTTAGCAACTTTAGCTGCGGCTTATATAGGCGAATCCATGGAGGGGCATCATTGATTAGTTTTCGAAATAGTCTTTTGGTTTTATCTTAGACCAAGGCAATGTATACATGGCTCAAGATAATCTAGGGAACATAAATATACAAAGAATTTTCAAATACAGAAGAGATATATACTATCTAGGGAATCAGAGTAATAGTAAACCAAAGATTGCGCTATTCCTATTCTTCAGGAATTGTCTGTCAAAAAAGGAAAGAGATCTCAACACTTTTTCCTCTCAACGATTGAACAAAAGAAAAAAAAAAGCAGAAATTACACTTAGCTTAGATTAAGAAAATCTTGATATTTCTAGGCTATGCAAGGATTCGGACTAAACTAATTCATTTGTCCATTTAGATTGATTGTCTACATGTGGGTGGGATAATTCTAAAGAAAAAGGGGGACAAAGAGAAAAAAGGATTGGTTAGGGTAGAGTGGAGTCTACTAGATGTATTGAATCGAATTGCTATAAGACAACCCTTGCCTATGGATGTTTCGAAGAATGATTACAGAACTAGAATTGGAATCCATGAATAATGAATTGGTTTACGTTAGGGAAGAAAGACATGTATATGCTCTACTATATTAGATAGAGACTAGTTATATAGGAACTCAAGATATATCTAATCCCCGCCCGCCCTACTACTGTGAGTTTAGATAGGGCTTGCAATGGGAGTCCTTCCGTTTCCTTCCTCTGTCAGATTCAATCAAGAACAAAGAATGAAGCTTTAGAAAAAAGAAAGAGCAGAACAGCAGAACAAGAGTTGTATGGATTCACAAAAACTACGGGGGTGGATAGGAAAAAGAGAGATTGAAATAGTTTGGACAATTCAATATCCATAAGATTCTAACTTACTTCTTTTTATCAGGATAAATCTTAGCGATGGAATAATCAGTGATATGAGAATGAATTGGTTGATCGTCTGTCTCATTAATCATTTCTTTCTTTTGGTGTTAGGAACTTATTATGAATCCACTGATTTCTTCCGCTTCCGTTATTGCTGCTGGATTGGCCGGCGGGCTTGCTTCTATTGGACCTGGGGTTGGTCAAGGTACTGCTGCAGGCTAA

mRNA sequence

ATGTCACATAATGGAGAAGCAGTACCACCAGTTCCAGATCTTAATACAACCATTCTTCAAGCAATTCAAGGTATGATGAAAATGATGATGGAAGATAGACAAGAAAGAAGGGCGCAACAACAAAGACAAGAACGAACATTACAAGAAGATGAAGGTATAGTAGTACAAGAAAGACAAGTTGATGGTAGATGGAGAGGAAGAAATAACCATGCAACTATTATGCAACCTAGAAGGATGGAAAGAGTACATGAAGATAGAGATGGGGGAGTTAAACTCAAAATCCCGCCCTTTTGTGGAACGGCAGATTCTGAGGCATACTTGCAGTGGGAAAGAAAGATAGAGCATGTGTTTGATTGCAACACCTATAGTGAAAATAAGAAGATGAGACTTGCTATTGCCGAATTTACCAATCATGCTAGTGATTGGTACCAACATCTCAAATCCGAGAGAAGAAGAAAAGAGGAGAATCCAATAGAGACATGGGAAGAACTTAAAGAAGTCATGAGAAAAAGGTATGCTCCAAAACATTATGAAAGAAATTTGAAAACTAAATTGCAAGGTTTGAGGCAAGGAACAAAAAGTGTGGCGGAATATTATCAAGAGATGGAAACTATGATGAAAAGAGCAAAGGTTAGAGAAGAAGAAGAAGATACCATGTCTAGATTCCTTGGAGGTTTGAATCGAGAAATTGCTCATCTTGTTGACAGAAATCCACCACCATATCTGGAAGATATGTATCATTATGCTCTCAAAATTGAAGACCAATTGAAGGAAGAAAAAGAGCATTCAAAAAGGTACACATCACGAACTAGCATCTTTTCAAATTCTAATACTTGGAACAAGGATAGTTTTATGAATAAAAATGATTCGATGTCACCAAAAGGAAAGTTTGTGACTGCTAAAAGAGTGGAGGCTGAGAGTTTCAATGGTAAAATGAATGAAGCTTCAAAGACGGTAAAAGAGAAGTCTAGTTCTATTCAATGTTGGAAGTGCAAAGGATTTGGACACATGAGCAAAGAGTGTGTTAATGAAAAAGTTATGGTGATAAGGAATGGTATACTTGATTCAGATGATGAATGTGAGGATCATGATTCACAGCTTGTGGAAGAAATCGCCGCATATGATGATGAGTATGTTGAAGAAGGTAATTCCATATCTTTGATCACAAGAAAGGAACTTATTATGAATCCACTGATTTCTTCCGCTTCCGTTATTGCTGCTGGATTGGCCGGCGGGCTTGCTTCTATTGGACCTGGGGTTGGTCAAGGTACTGCTGCAGGCTAA

Coding sequence (CDS)

ATGTCACATAATGGAGAAGCAGTACCACCAGTTCCAGATCTTAATACAACCATTCTTCAAGCAATTCAAGGTATGATGAAAATGATGATGGAAGATAGACAAGAAAGAAGGGCGCAACAACAAAGACAAGAACGAACATTACAAGAAGATGAAGGTATAGTAGTACAAGAAAGACAAGTTGATGGTAGATGGAGAGGAAGAAATAACCATGCAACTATTATGCAACCTAGAAGGATGGAAAGAGTACATGAAGATAGAGATGGGGGAGTTAAACTCAAAATCCCGCCCTTTTGTGGAACGGCAGATTCTGAGGCATACTTGCAGTGGGAAAGAAAGATAGAGCATGTGTTTGATTGCAACACCTATAGTGAAAATAAGAAGATGAGACTTGCTATTGCCGAATTTACCAATCATGCTAGTGATTGGTACCAACATCTCAAATCCGAGAGAAGAAGAAAAGAGGAGAATCCAATAGAGACATGGGAAGAACTTAAAGAAGTCATGAGAAAAAGGTATGCTCCAAAACATTATGAAAGAAATTTGAAAACTAAATTGCAAGGTTTGAGGCAAGGAACAAAAAGTGTGGCGGAATATTATCAAGAGATGGAAACTATGATGAAAAGAGCAAAGGTTAGAGAAGAAGAAGAAGATACCATGTCTAGATTCCTTGGAGGTTTGAATCGAGAAATTGCTCATCTTGTTGACAGAAATCCACCACCATATCTGGAAGATATGTATCATTATGCTCTCAAAATTGAAGACCAATTGAAGGAAGAAAAAGAGCATTCAAAAAGGTACACATCACGAACTAGCATCTTTTCAAATTCTAATACTTGGAACAAGGATAGTTTTATGAATAAAAATGATTCGATGTCACCAAAAGGAAAGTTTGTGACTGCTAAAAGAGTGGAGGCTGAGAGTTTCAATGGTAAAATGAATGAAGCTTCAAAGACGGTAAAAGAGAAGTCTAGTTCTATTCAATGTTGGAAGTGCAAAGGATTTGGACACATGAGCAAAGAGTGTGTTAATGAAAAAGTTATGGTGATAAGGAATGGTATACTTGATTCAGATGATGAATGTGAGGATCATGATTCACAGCTTGTGGAAGAAATCGCCGCATATGATGATGAGTATGTTGAAGAAGGTAATTCCATATCTTTGATCACAAGAAAGGAACTTATTATGAATCCACTGATTTCTTCCGCTTCCGTTATTGCTGCTGGATTGGCCGGCGGGCTTGCTTCTATTGGACCTGGGGTTGGTCAAGGTACTGCTGCAGGCTAA

Protein sequence

MSHNGEAVPPVPDLNTTILQAIQGMMKMMMEDRQERRAQQQRQERTLQEDEGIVVQERQVDGRWRGRNNHATIMQPRRMERVHEDRDGGVKLKIPPFCGTADSEAYLQWERKIEHVFDCNTYSENKKMRLAIAEFTNHASDWYQHLKSERRRKEENPIETWEELKEVMRKRYAPKHYERNLKTKLQGLRQGTKSVAEYYQEMETMMKRAKVREEEEDTMSRFLGGLNREIAHLVDRNPPPYLEDMYHYALKIEDQLKEEKEHSKRYTSRTSIFSNSNTWNKDSFMNKNDSMSPKGKFVTAKRVEAESFNGKMNEASKTVKEKSSSIQCWKCKGFGHMSKECVNEKVMVIRNGILDSDDECEDHDSQLVEEIAAYDDEYVEEGNSISLITRKELIMNPLISSASVIAAGLAGGLASIGPGVGQGTAAG

Homology

[Close]

BLAST of CmoCh13G003100 vs. ExPASy Swiss-Prot
Match: A8SE66 (ATP synthase subunit c, chloroplastic OS=Ceratophyllum demersum OX=4428 GN=atpH PE=3 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.8e-06
Identity = 32/33 (96.97%), Postives = 32/33 (96.97%), Query Frame = 0


Query: 395 MNPLISSASVIAAGLAGGLASIGPGVGQGTAAG 428
           MNPLISSASVIAAGLA GLASIGPGVGQGTAAG
Sbjct: 1   MNPLISSASVIAAGLAVGLASIGPGVGQGTAAG 33

[Close]

BLAST of CmoCh13G003100 vs. ExPASy Swiss-Prot
Match: Q4FGF2 (ATP synthase subunit c, chloroplastic OS=Acorus americanus OX=263995 GN=atpH PE=3 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 3.9e-06
Identity = 31/33 (93.94%), Postives = 32/33 (96.97%), Query Frame = 0


Query: 395 MNPLISSASVIAAGLAGGLASIGPGVGQGTAAG 428
           MNPLIS+ASVIAAGLA GLASIGPGVGQGTAAG
Sbjct: 1   MNPLISAASVIAAGLAVGLASIGPGVGQGTAAG 33

[Close]

BLAST of CmoCh13G003100 vs. ExPASy Swiss-Prot
Match: Q3V547 (ATP synthase subunit c, chloroplastic OS=Acorus calamus OX=4465 GN=atpH PE=3 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 3.9e-06
Identity = 31/33 (93.94%), Postives = 32/33 (96.97%), Query Frame = 0


Query: 395 MNPLISSASVIAAGLAGGLASIGPGVGQGTAAG 428
           MNPLIS+ASVIAAGLA GLASIGPGVGQGTAAG
Sbjct: 1   MNPLISAASVIAAGLAVGLASIGPGVGQGTAAG 33

[Close]

BLAST of CmoCh13G003100 vs. ExPASy Swiss-Prot
Match: Q85FN2 (ATP synthase subunit c, chloroplastic OS=Adiantum capillus-veneris OX=13818 GN=atpH PE=2 SV=2)

HSP 1 Score: 54.3 bits (129), Expect = 3.9e-06
Identity = 31/33 (93.94%), Postives = 32/33 (96.97%), Query Frame = 0


Query: 395 MNPLISSASVIAAGLAGGLASIGPGVGQGTAAG 428
           MNPLIS+ASVIAAGLA GLASIGPGVGQGTAAG
Sbjct: 1   MNPLISAASVIAAGLAVGLASIGPGVGQGTAAG 33

[Close]

BLAST of CmoCh13G003100 vs. ExPASy Swiss-Prot
Match: A4QJA2 (ATP synthase subunit c, chloroplastic OS=Aethionema cordifolium OX=434059 GN=atpH PE=3 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 3.9e-06
Identity = 31/33 (93.94%), Postives = 32/33 (96.97%), Query Frame = 0


Query: 395 MNPLISSASVIAAGLAGGLASIGPGVGQGTAAG 428
           MNPLIS+ASVIAAGLA GLASIGPGVGQGTAAG
Sbjct: 1   MNPLISAASVIAAGLAVGLASIGPGVGQGTAAG 33

[Close]

BLAST of CmoCh13G003100 vs. ExPASy TrEMBL
Match: A0A6J1EVI6 (LOW QUALITY PROTEIN: uncharacterized protein LOC111438459 OS=Cucurbita moschata OX=3662 GN=LOC111438459 PE=4 SV=1)

HSP 1 Score: 613.2 bits (1580), Expect = 8.1e-172
Identity = 324/393 (82.44%), Postives = 336/393 (85.50%), Query Frame = 0


Query: 1   MSHNGEAVPPVPDLNTTILQAIQGMMKMMMEDRQERRAQQQRQERTLQEDEGIVVQERQV 60
           MSHNGEAVPPVPDLNTTILQAIQGMM+MMMEDRQERRAQQQRQERT              
Sbjct: 1   MSHNGEAVPPVPDLNTTILQAIQGMMEMMMEDRQERRAQQQRQERT-------------- 60

Query: 61  DGRWRGRNNHATIMQPRRMERVHEDRDGGVKLKIPPFCGTADSEAYLQWERKIEHVFDCN 120
                          PRRMERVHEDRDGGVKLKIPPFC TADSEAYLQWERKIEHVFDCN
Sbjct: 61  ---------------PRRMERVHEDRDGGVKLKIPPFCVTADSEAYLQWERKIEHVFDCN 120

Query: 121 TYSENKKMRLAIAEFTNHASDWYQHLKSERRRKEENPIETWEELKEVMRKRYAPKHYERN 180
           TYSENKKMRLAIAEFTNHA  WYQHLKSERRRKEE+P+ETWEELKE MRKRY PKHYERN
Sbjct: 121 TYSENKKMRLAIAEFTNHA-XWYQHLKSERRRKEEDPVETWEELKEAMRKRYVPKHYERN 180

Query: 181 LKTKLQGLRQGTKSVAEYYQEMETMMKRAKVREEEEDTMSRFLGGLNREIAHLVDRNPPP 240
           LKTKLQGLRQGTKSVAEYYQEMETMM+RA VREEEEDTMSRFLGGLNREIAHLVDRNPPP
Sbjct: 181 LKTKLQGLRQGTKSVAEYYQEMETMMERANVREEEEDTMSRFLGGLNREIAHLVDRNPPP 240

Query: 241 YLEDMYHYALKIEDQLKEEKEHSKRYTSRTSIFSNSNTWNKDSFMNKNDSMSPKGKFVTA 300
           YLEDM HYALKIEDQLKEEKEHSKRYTSRT+ FSNS TWNKDSF+N+N+SMSPK KFV A
Sbjct: 241 YLEDMCHYALKIEDQLKEEKEHSKRYTSRTNTFSNSKTWNKDSFVNRNESMSPKEKFVAA 300

Query: 301 KRVEAESFNGKMNEASKTVKEKSSSIQCWKCKGFGHMSKECVNEKVMVIRNGILDSDDEC 360
           KRVEAES N K NEASKTV+EKSSSIQCWKCKGFGHMSKECVN+KVMVIRNGILDSDDE 
Sbjct: 301 KRVEAESSNCKKNEASKTVQEKSSSIQCWKCKGFGHMSKECVNKKVMVIRNGILDSDDE- 350

Query: 361 EDHDSQLVEEIAAYDDEYVEEGNSISLITRKEL 394
                       +YDDEYVEEGNSISLITR+ L
Sbjct: 361 ------------SYDDEYVEEGNSISLITRRVL 350

[Close]

BLAST of CmoCh13G003100 vs. ExPASy TrEMBL
Match: A0A5D3DRJ1 (F15O4.13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G00130 PE=4 SV=1)

HSP 1 Score: 579.7 bits (1493), Expect = 9.9e-162
Identity = 295/401 (73.57%), Postives = 346/401 (86.28%), Query Frame = 0


Query: 1   MSHNGEAVPPVPDLNTTILQAIQGMMKMMMEDRQERRAQQQRQERTLQEDEGIV---VQE 60
           MSH+GE VP V D N  ILQAIQGM+++M E+RQERRAQQQR+ R  QEDEG+      E
Sbjct: 1   MSHDGEEVPEVIDPNVAILQAIQGMLELMREERQERRAQQQREVRPFQEDEGMFDLNAHE 60

Query: 61  RQVDG----RWRGRNNHATIMQPRRMERVHEDRDGGVKLKIPPFCGTADSEAYLQWERKI 120
           RQ+ G    R RGRNN A +MQPRRMERVHEDRDGGVKLKIPPF GTADSE YLQWERKI
Sbjct: 61  RQLGGRGNVRGRGRNNLANVMQPRRMERVHEDRDGGVKLKIPPFTGTADSETYLQWERKI 120

Query: 121 EHVFDCNTYSENKKMRLAIAEFTNHASDWYQHLKSERRRKEENPIETWEELKEVMRKRYA 180
           EHVFDCNT+SENKKM+LAIAEFTN+AS+WY +LKSERRRKEE+PIETWEELKE MRKR+ 
Sbjct: 121 EHVFDCNTFSENKKMKLAIAEFTNYASEWYHYLKSERRRKEEDPIETWEELKEAMRKRFV 180

Query: 181 PKHYERNLKTKLQGLRQGTKSVAEYYQEMETMMKRAKVREEEEDTMSRFLGGLNREIAHL 240
           PKHYER+LKTKLQ LRQGTKSVAEYY+EMET++ RA+++E+EEDTMSRFLGGLN+EIAHL
Sbjct: 181 PKHYERDLKTKLQSLRQGTKSVAEYYREMETLIGRARIQEDEEDTMSRFLGGLNQEIAHL 240

Query: 241 VDRNPPPYLEDMYHYALKIEDQLKEEKEHSKRYTSRTSIFSNSNTWNKDSFMNKNDSMSP 300
           VDRNPP  +EDMYHYA+KIE QLKEEKE SKRY S+T  FS+SNTWNKD F+N+N+SM  
Sbjct: 241 VDRNPPYNMEDMYHYAIKIEAQLKEEKERSKRYVSKTHTFSSSNTWNKDGFVNRNESMQS 300

Query: 301 KGKFVTAKRVEAESFNGKMNEASKTVKEKSSSIQCWKCKGFGHMSKECVNEKVMVIRNGI 360
           +GKFV A++VE ES N K  EASK V+EK+SSIQCWKCKGFGHMSK+C+N++VMV+RNG+
Sbjct: 301 RGKFVAAQKVETESSNTKKFEASKEVREKTSSIQCWKCKGFGHMSKDCINKRVMVVRNGV 360

Query: 361 LDSDDECEDHDSQLVEEI-AAYDDEYVEEGNSISLITRKEL 394
           +DS+DECE++D+QL EE     DDEY+EEG+SISLITR+ L
Sbjct: 361 IDSEDECEENDAQLEEEYETPVDDEYIEEGSSISLITRRVL 401

[Close]

BLAST of CmoCh13G003100 vs. ExPASy TrEMBL
Match: A0A5D3C3D3 (F15O4.13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G001490 PE=4 SV=1)

HSP 1 Score: 579.7 bits (1493), Expect = 9.9e-162
Identity = 295/401 (73.57%), Postives = 346/401 (86.28%), Query Frame = 0


Query: 1   MSHNGEAVPPVPDLNTTILQAIQGMMKMMMEDRQERRAQQQRQERTLQEDEGIV---VQE 60
           MSH+GE VP V D N  ILQAIQGM+++M E+RQERRAQQQR+ R  QEDEG+      E
Sbjct: 1   MSHDGEEVPEVIDPNVAILQAIQGMLELMREERQERRAQQQREVRPFQEDEGMFDLNAHE 60

Query: 61  RQVDG----RWRGRNNHATIMQPRRMERVHEDRDGGVKLKIPPFCGTADSEAYLQWERKI 120
           RQ+ G    R RGRNN A +MQPRRMERVHEDRDGGVKLKIPPF GTADSE YLQWERKI
Sbjct: 61  RQLGGRGNVRGRGRNNLANVMQPRRMERVHEDRDGGVKLKIPPFTGTADSETYLQWERKI 120

Query: 121 EHVFDCNTYSENKKMRLAIAEFTNHASDWYQHLKSERRRKEENPIETWEELKEVMRKRYA 180
           EHVFDCNT+SENKKM+LAIAEFTN+AS+WY +LKSERRRKEE+PIETWEELKE MRKR+ 
Sbjct: 121 EHVFDCNTFSENKKMKLAIAEFTNYASEWYHYLKSERRRKEEDPIETWEELKEAMRKRFV 180

Query: 181 PKHYERNLKTKLQGLRQGTKSVAEYYQEMETMMKRAKVREEEEDTMSRFLGGLNREIAHL 240
           PKHYER+LKTKLQ LRQGTKSVAEYY+EMET++ RA+++E+EEDTMSRFLGGLN+EIAHL
Sbjct: 181 PKHYERDLKTKLQSLRQGTKSVAEYYREMETLIGRARIQEDEEDTMSRFLGGLNQEIAHL 240

Query: 241 VDRNPPPYLEDMYHYALKIEDQLKEEKEHSKRYTSRTSIFSNSNTWNKDSFMNKNDSMSP 300
           VDRNPP  +EDMYHYA+KIE QLKEEKE SKRY S+T  FS+SNTWNKD F+N+N+SM  
Sbjct: 241 VDRNPPYNMEDMYHYAIKIEAQLKEEKERSKRYVSKTHTFSSSNTWNKDGFVNRNESMQS 300

Query: 301 KGKFVTAKRVEAESFNGKMNEASKTVKEKSSSIQCWKCKGFGHMSKECVNEKVMVIRNGI 360
           +GKFV A++VE ES N K  EASK V+EK+SSIQCWKCKGFGHMSK+C+N++VMV+RNG+
Sbjct: 301 RGKFVAAQKVETESSNTKKFEASKEVREKTSSIQCWKCKGFGHMSKDCINKRVMVVRNGV 360

Query: 361 LDSDDECEDHDSQLVEEI-AAYDDEYVEEGNSISLITRKEL 394
           +DS+DECE++D+QL EE     DDEY+EEG+SISLITR+ L
Sbjct: 361 IDSEDECEENDAQLEEEYETPVDDEYIEEGSSISLITRRVL 401

[Close]

BLAST of CmoCh13G003100 vs. ExPASy TrEMBL
Match: A0A5D3CK70 (F15O4.13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold304G00110 PE=4 SV=1)

HSP 1 Score: 579.7 bits (1493), Expect = 9.9e-162
Identity = 295/401 (73.57%), Postives = 346/401 (86.28%), Query Frame = 0


Query: 1   MSHNGEAVPPVPDLNTTILQAIQGMMKMMMEDRQERRAQQQRQERTLQEDEGIV---VQE 60
           MSH+GE VP V D N  ILQAIQGM+++M E+RQERRAQQQR+ R  QEDEG+      E
Sbjct: 1   MSHDGEEVPEVIDPNVAILQAIQGMLELMREERQERRAQQQREVRPFQEDEGMFDLNAHE 60

Query: 61  RQVDG----RWRGRNNHATIMQPRRMERVHEDRDGGVKLKIPPFCGTADSEAYLQWERKI 120
           RQ+ G    R RGRNN A +MQPRRMERVHEDRDGGVKLKIPPF GTADSE YLQWERKI
Sbjct: 61  RQLGGRGNVRGRGRNNLANVMQPRRMERVHEDRDGGVKLKIPPFTGTADSETYLQWERKI 120

Query: 121 EHVFDCNTYSENKKMRLAIAEFTNHASDWYQHLKSERRRKEENPIETWEELKEVMRKRYA 180
           EHVFDCNT+SENKKM+LAIAEFTN+AS+WY +LKSERRRKEE+PIETWEELKE MRKR+ 
Sbjct: 121 EHVFDCNTFSENKKMKLAIAEFTNYASEWYHYLKSERRRKEEDPIETWEELKEAMRKRFV 180

Query: 181 PKHYERNLKTKLQGLRQGTKSVAEYYQEMETMMKRAKVREEEEDTMSRFLGGLNREIAHL 240
           PKHYER+LKTKLQ LRQGTKSVAEYY+EMET++ RA+++E+EEDTMSRFLGGLN+EIAHL
Sbjct: 181 PKHYERDLKTKLQSLRQGTKSVAEYYREMETLIGRARIQEDEEDTMSRFLGGLNQEIAHL 240

Query: 241 VDRNPPPYLEDMYHYALKIEDQLKEEKEHSKRYTSRTSIFSNSNTWNKDSFMNKNDSMSP 300
           VDRNPP  +EDMYHYA+KIE QLKEEKE SKRY S+T  FS+SNTWNKD F+N+N+SM  
Sbjct: 241 VDRNPPYNMEDMYHYAIKIEAQLKEEKERSKRYVSKTHTFSSSNTWNKDGFVNRNESMQS 300

Query: 301 KGKFVTAKRVEAESFNGKMNEASKTVKEKSSSIQCWKCKGFGHMSKECVNEKVMVIRNGI 360
           +GKFV A++VE ES N K  EASK V+EK+SSIQCWKCKGFGHMSK+C+N++VMV+RNG+
Sbjct: 301 RGKFVAAQKVETESSNTKKFEASKEVREKTSSIQCWKCKGFGHMSKDCINKRVMVVRNGV 360

Query: 361 LDSDDECEDHDSQLVEEI-AAYDDEYVEEGNSISLITRKEL 394
           +DS+DECE++D+QL EE     DDEY+EEG+SISLITR+ L
Sbjct: 361 IDSEDECEENDAQLEEEYETPVDDEYIEEGSSISLITRRVL 401

[Close]

BLAST of CmoCh13G003100 vs. ExPASy TrEMBL
Match: A0A5D3BWE8 (F15O4.13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1738G00600 PE=4 SV=1)

HSP 1 Score: 579.7 bits (1493), Expect = 9.9e-162
Identity = 295/401 (73.57%), Postives = 346/401 (86.28%), Query Frame = 0


Query: 1   MSHNGEAVPPVPDLNTTILQAIQGMMKMMMEDRQERRAQQQRQERTLQEDEGIV---VQE 60
           MSH+GE VP V D N  ILQAIQGM+++M E+RQERRAQQQR+ R  QEDEG+      E
Sbjct: 1   MSHDGEEVPEVIDPNVAILQAIQGMLELMREERQERRAQQQREVRPFQEDEGMFDLNAHE 60

Query: 61  RQVDG----RWRGRNNHATIMQPRRMERVHEDRDGGVKLKIPPFCGTADSEAYLQWERKI 120
           RQ+ G    R RGRNN A +MQPRRMERVHEDRDGGVKLKIPPF GTADSE YLQWERKI
Sbjct: 61  RQLGGRGNVRGRGRNNLANVMQPRRMERVHEDRDGGVKLKIPPFTGTADSETYLQWERKI 120

Query: 121 EHVFDCNTYSENKKMRLAIAEFTNHASDWYQHLKSERRRKEENPIETWEELKEVMRKRYA 180
           EHVFDCNT+SENKKM+LAIAEFTN+AS+WY +LKSERRRKEE+PIETWEELKE MRKR+ 
Sbjct: 121 EHVFDCNTFSENKKMKLAIAEFTNYASEWYHYLKSERRRKEEDPIETWEELKEAMRKRFV 180

Query: 181 PKHYERNLKTKLQGLRQGTKSVAEYYQEMETMMKRAKVREEEEDTMSRFLGGLNREIAHL 240
           PKHYER+LKTKLQ LRQGTKSVAEYY+EMET++ RA+++E+EEDTMSRFLGGLN+EIAHL
Sbjct: 181 PKHYERDLKTKLQSLRQGTKSVAEYYREMETLIGRARIQEDEEDTMSRFLGGLNQEIAHL 240

Query: 241 VDRNPPPYLEDMYHYALKIEDQLKEEKEHSKRYTSRTSIFSNSNTWNKDSFMNKNDSMSP 300
           VDRNPP  +EDMYHYA+KIE QLKEEKE SKRY S+T  FS+SNTWNKD F+N+N+SM  
Sbjct: 241 VDRNPPYNMEDMYHYAIKIEAQLKEEKERSKRYVSKTHTFSSSNTWNKDGFVNRNESMQS 300

Query: 301 KGKFVTAKRVEAESFNGKMNEASKTVKEKSSSIQCWKCKGFGHMSKECVNEKVMVIRNGI 360
           +GKFV A++VE ES N K  EASK V+EK+SSIQCWKCKGFGHMSK+C+N++VMV+RNG+
Sbjct: 301 RGKFVAAQKVETESSNTKKFEASKEVREKTSSIQCWKCKGFGHMSKDCINKRVMVVRNGV 360

Query: 361 LDSDDECEDHDSQLVEEI-AAYDDEYVEEGNSISLITRKEL 394
           +DS+DECE++D+QL EE     DDEY+EEG+SISLITR+ L
Sbjct: 361 IDSEDECEENDAQLEEEYETPVDDEYIEEGSSISLITRRVL 401

[Close]

BLAST of CmoCh13G003100 vs. NCBI nr
Match: XP_022932136.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111438459, partial [Cucurbita moschata])

HSP 1 Score: 613.2 bits (1580), Expect = 1.7e-171
Identity = 324/393 (82.44%), Postives = 336/393 (85.50%), Query Frame = 0


Query: 1   MSHNGEAVPPVPDLNTTILQAIQGMMKMMMEDRQERRAQQQRQERTLQEDEGIVVQERQV 60
           MSHNGEAVPPVPDLNTTILQAIQGMM+MMMEDRQERRAQQQRQERT              
Sbjct: 1   MSHNGEAVPPVPDLNTTILQAIQGMMEMMMEDRQERRAQQQRQERT-------------- 60

Query: 61  DGRWRGRNNHATIMQPRRMERVHEDRDGGVKLKIPPFCGTADSEAYLQWERKIEHVFDCN 120
                          PRRMERVHEDRDGGVKLKIPPFC TADSEAYLQWERKIEHVFDCN
Sbjct: 61  ---------------PRRMERVHEDRDGGVKLKIPPFCVTADSEAYLQWERKIEHVFDCN 120

Query: 121 TYSENKKMRLAIAEFTNHASDWYQHLKSERRRKEENPIETWEELKEVMRKRYAPKHYERN 180
           TYSENKKMRLAIAEFTNHA  WYQHLKSERRRKEE+P+ETWEELKE MRKRY PKHYERN
Sbjct: 121 TYSENKKMRLAIAEFTNHA-XWYQHLKSERRRKEEDPVETWEELKEAMRKRYVPKHYERN 180

Query: 181 LKTKLQGLRQGTKSVAEYYQEMETMMKRAKVREEEEDTMSRFLGGLNREIAHLVDRNPPP 240
           LKTKLQGLRQGTKSVAEYYQEMETMM+RA VREEEEDTMSRFLGGLNREIAHLVDRNPPP
Sbjct: 181 LKTKLQGLRQGTKSVAEYYQEMETMMERANVREEEEDTMSRFLGGLNREIAHLVDRNPPP 240

Query: 241 YLEDMYHYALKIEDQLKEEKEHSKRYTSRTSIFSNSNTWNKDSFMNKNDSMSPKGKFVTA 300
           YLEDM HYALKIEDQLKEEKEHSKRYTSRT+ FSNS TWNKDSF+N+N+SMSPK KFV A
Sbjct: 241 YLEDMCHYALKIEDQLKEEKEHSKRYTSRTNTFSNSKTWNKDSFVNRNESMSPKEKFVAA 300

Query: 301 KRVEAESFNGKMNEASKTVKEKSSSIQCWKCKGFGHMSKECVNEKVMVIRNGILDSDDEC 360
           KRVEAES N K NEASKTV+EKSSSIQCWKCKGFGHMSKECVN+KVMVIRNGILDSDDE 
Sbjct: 301 KRVEAESSNCKKNEASKTVQEKSSSIQCWKCKGFGHMSKECVNKKVMVIRNGILDSDDE- 350

Query: 361 EDHDSQLVEEIAAYDDEYVEEGNSISLITRKEL 394
                       +YDDEYVEEGNSISLITR+ L
Sbjct: 361 ------------SYDDEYVEEGNSISLITRRVL 350

[Close]

BLAST of CmoCh13G003100 vs. NCBI nr
Match: TYK22420.1 (Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 579.7 bits (1493), Expect = 2.0e-161
Identity = 295/401 (73.57%), Postives = 346/401 (86.28%), Query Frame = 0


Query: 1   MSHNGEAVPPVPDLNTTILQAIQGMMKMMMEDRQERRAQQQRQERTLQEDEGIV---VQE 60
           MSH+GE VP V D N  ILQAIQGM+++M E+RQERRAQQQR+ R  QEDEG+      E
Sbjct: 1   MSHDGEEVPEVIDPNVAILQAIQGMLELMREERQERRAQQQREVRPFQEDEGMFDLNAHE 60

Query: 61  RQVDG----RWRGRNNHATIMQPRRMERVHEDRDGGVKLKIPPFCGTADSEAYLQWERKI 120
           RQ+ G    R RGRNN A +MQPRRMERVHEDRDGGVKLKIPPF GTADSE YLQWERKI
Sbjct: 61  RQLGGRGNVRGRGRNNLANVMQPRRMERVHEDRDGGVKLKIPPFTGTADSETYLQWERKI 120

Query: 121 EHVFDCNTYSENKKMRLAIAEFTNHASDWYQHLKSERRRKEENPIETWEELKEVMRKRYA 180
           EHVFDCNT+SENKKM+LAIAEFTN+AS+WY +LKSERRRKEE+PIETWEELKE MRKR+ 
Sbjct: 121 EHVFDCNTFSENKKMKLAIAEFTNYASEWYHYLKSERRRKEEDPIETWEELKEAMRKRFV 180

Query: 181 PKHYERNLKTKLQGLRQGTKSVAEYYQEMETMMKRAKVREEEEDTMSRFLGGLNREIAHL 240
           PKHYER+LKTKLQ LRQGTKSVAEYY+EMET++ RA+++E+EEDTMSRFLGGLN+EIAHL
Sbjct: 181 PKHYERDLKTKLQSLRQGTKSVAEYYREMETLIGRARIQEDEEDTMSRFLGGLNQEIAHL 240

Query: 241 VDRNPPPYLEDMYHYALKIEDQLKEEKEHSKRYTSRTSIFSNSNTWNKDSFMNKNDSMSP 300
           VDRNPP  +EDMYHYA+KIE QLKEEKE SKRY S+T  FS+SNTWNKD F+N+N+SM  
Sbjct: 241 VDRNPPYNMEDMYHYAIKIEAQLKEEKERSKRYVSKTHTFSSSNTWNKDGFVNRNESMQS 300

Query: 301 KGKFVTAKRVEAESFNGKMNEASKTVKEKSSSIQCWKCKGFGHMSKECVNEKVMVIRNGI 360
           +GKFV A++VE ES N K  EASK V+EK+SSIQCWKCKGFGHMSK+C+N++VMV+RNG+
Sbjct: 301 RGKFVAAQKVETESSNTKKFEASKEVREKTSSIQCWKCKGFGHMSKDCINKRVMVVRNGV 360

Query: 361 LDSDDECEDHDSQLVEEI-AAYDDEYVEEGNSISLITRKEL 394
           +DS+DECE++D+QL EE     DDEY+EEG+SISLITR+ L
Sbjct: 361 IDSEDECEENDAQLEEEYETPVDDEYIEEGSSISLITRRVL 401

[Close]

BLAST of CmoCh13G003100 vs. NCBI nr
Match: TYK26105.1 (F15O4.13 [Cucumis melo var. makuwa])

HSP 1 Score: 579.7 bits (1493), Expect = 2.0e-161
Identity = 295/401 (73.57%), Postives = 346/401 (86.28%), Query Frame = 0


Query: 1   MSHNGEAVPPVPDLNTTILQAIQGMMKMMMEDRQERRAQQQRQERTLQEDEGIV---VQE 60
           MSH+GE VP V D N  ILQAIQGM+++M E+RQERRAQQQR+ R  QEDEG+      E
Sbjct: 1   MSHDGEEVPEVIDPNVAILQAIQGMLELMREERQERRAQQQREVRPFQEDEGMFDLNAHE 60

Query: 61  RQVDG----RWRGRNNHATIMQPRRMERVHEDRDGGVKLKIPPFCGTADSEAYLQWERKI 120
           RQ+ G    R RGRNN A +MQPRRMERVHEDRDGGVKLKIPPF GTADSE YLQWERKI
Sbjct: 61  RQLGGRGNVRGRGRNNLANVMQPRRMERVHEDRDGGVKLKIPPFTGTADSETYLQWERKI 120

Query: 121 EHVFDCNTYSENKKMRLAIAEFTNHASDWYQHLKSERRRKEENPIETWEELKEVMRKRYA 180
           EHVFDCNT+SENKKM+LAIAEFTN+AS+WY +LKSERRRKEE+PIETWEELKE MRKR+ 
Sbjct: 121 EHVFDCNTFSENKKMKLAIAEFTNYASEWYHYLKSERRRKEEDPIETWEELKEAMRKRFV 180

Query: 181 PKHYERNLKTKLQGLRQGTKSVAEYYQEMETMMKRAKVREEEEDTMSRFLGGLNREIAHL 240
           PKHYER+LKTKLQ LRQGTKSVAEYY+EMET++ RA+++E+EEDTMSRFLGGLN+EIAHL
Sbjct: 181 PKHYERDLKTKLQSLRQGTKSVAEYYREMETLIGRARIQEDEEDTMSRFLGGLNQEIAHL 240

Query: 241 VDRNPPPYLEDMYHYALKIEDQLKEEKEHSKRYTSRTSIFSNSNTWNKDSFMNKNDSMSP 300
           VDRNPP  +EDMYHYA+KIE QLKEEKE SKRY S+T  FS+SNTWNKD F+N+N+SM  
Sbjct: 241 VDRNPPYNMEDMYHYAIKIEAQLKEEKERSKRYVSKTHTFSSSNTWNKDGFVNRNESMQS 300

Query: 301 KGKFVTAKRVEAESFNGKMNEASKTVKEKSSSIQCWKCKGFGHMSKECVNEKVMVIRNGI 360
           +GKFV A++VE ES N K  EASK V+EK+SSIQCWKCKGFGHMSK+C+N++VMV+RNG+
Sbjct: 301 RGKFVAAQKVETESSNTKKFEASKEVREKTSSIQCWKCKGFGHMSKDCINKRVMVVRNGV 360

Query: 361 LDSDDECEDHDSQLVEEI-AAYDDEYVEEGNSISLITRKEL 394
           +DS+DECE++D+QL EE     DDEY+EEG+SISLITR+ L
Sbjct: 361 IDSEDECEENDAQLEEEYETPVDDEYIEEGSSISLITRRVL 401

[Close]

BLAST of CmoCh13G003100 vs. NCBI nr
Match: TYK02449.1 (F15O4.13 [Cucumis melo var. makuwa])

HSP 1 Score: 579.7 bits (1493), Expect = 2.0e-161
Identity = 295/401 (73.57%), Postives = 346/401 (86.28%), Query Frame = 0


Query: 1   MSHNGEAVPPVPDLNTTILQAIQGMMKMMMEDRQERRAQQQRQERTLQEDEGIV---VQE 60
           MSH+GE VP V D N  ILQAIQGM+++M E+RQERRAQQQR+ R  QEDEG+      E
Sbjct: 1   MSHDGEEVPEVIDPNVAILQAIQGMLELMREERQERRAQQQREVRPFQEDEGMFDLNAHE 60

Query: 61  RQVDG----RWRGRNNHATIMQPRRMERVHEDRDGGVKLKIPPFCGTADSEAYLQWERKI 120
           RQ+ G    R RGRNN A +MQPRRMERVHEDRDGGVKLKIPPF GTADSE YLQWERKI
Sbjct: 61  RQLGGRGNVRGRGRNNLANVMQPRRMERVHEDRDGGVKLKIPPFTGTADSETYLQWERKI 120

Query: 121 EHVFDCNTYSENKKMRLAIAEFTNHASDWYQHLKSERRRKEENPIETWEELKEVMRKRYA 180
           EHVFDCNT+SENKKM+LAIAEFTN+AS+WY +LKSERRRKEE+PIETWEELKE MRKR+ 
Sbjct: 121 EHVFDCNTFSENKKMKLAIAEFTNYASEWYHYLKSERRRKEEDPIETWEELKEAMRKRFV 180

Query: 181 PKHYERNLKTKLQGLRQGTKSVAEYYQEMETMMKRAKVREEEEDTMSRFLGGLNREIAHL 240
           PKHYER+LKTKLQ LRQGTKSVAEYY+EMET++ RA+++E+EEDTMSRFLGGLN+EIAHL
Sbjct: 181 PKHYERDLKTKLQSLRQGTKSVAEYYREMETLIGRARIQEDEEDTMSRFLGGLNQEIAHL 240

Query: 241 VDRNPPPYLEDMYHYALKIEDQLKEEKEHSKRYTSRTSIFSNSNTWNKDSFMNKNDSMSP 300
           VDRNPP  +EDMYHYA+KIE QLKEEKE SKRY S+T  FS+SNTWNKD F+N+N+SM  
Sbjct: 241 VDRNPPYNMEDMYHYAIKIEAQLKEEKERSKRYVSKTHTFSSSNTWNKDGFVNRNESMQS 300

Query: 301 KGKFVTAKRVEAESFNGKMNEASKTVKEKSSSIQCWKCKGFGHMSKECVNEKVMVIRNGI 360
           +GKFV A++VE ES N K  EASK V+EK+SSIQCWKCKGFGHMSK+C+N++VMV+RNG+
Sbjct: 301 RGKFVAAQKVETESSNTKKFEASKEVREKTSSIQCWKCKGFGHMSKDCINKRVMVVRNGV 360

Query: 361 LDSDDECEDHDSQLVEEI-AAYDDEYVEEGNSISLITRKEL 394
           +DS+DECE++D+QL EE     DDEY+EEG+SISLITR+ L
Sbjct: 361 IDSEDECEENDAQLEEEYETPVDDEYIEEGSSISLITRRVL 401

[Close]

BLAST of CmoCh13G003100 vs. NCBI nr
Match: TYK11702.1 (F15O4.13 [Cucumis melo var. makuwa])

HSP 1 Score: 579.7 bits (1493), Expect = 2.0e-161
Identity = 295/401 (73.57%), Postives = 346/401 (86.28%), Query Frame = 0


Query: 1   MSHNGEAVPPVPDLNTTILQAIQGMMKMMMEDRQERRAQQQRQERTLQEDEGIV---VQE 60
           MSH+GE VP V D N  ILQAIQGM+++M E+RQERRAQQQR+ R  QEDEG+      E
Sbjct: 1   MSHDGEEVPEVIDPNVAILQAIQGMLELMREERQERRAQQQREVRPFQEDEGMFDLNAHE 60

Query: 61  RQVDG----RWRGRNNHATIMQPRRMERVHEDRDGGVKLKIPPFCGTADSEAYLQWERKI 120
           RQ+ G    R RGRNN A +MQPRRMERVHEDRDGGVKLKIPPF GTADSE YLQWERKI
Sbjct: 61  RQLGGRGNVRGRGRNNLANVMQPRRMERVHEDRDGGVKLKIPPFTGTADSETYLQWERKI 120

Query: 121 EHVFDCNTYSENKKMRLAIAEFTNHASDWYQHLKSERRRKEENPIETWEELKEVMRKRYA 180
           EHVFDCNT+SENKKM+LAIAEFTN+AS+WY +LKSERRRKEE+PIETWEELKE MRKR+ 
Sbjct: 121 EHVFDCNTFSENKKMKLAIAEFTNYASEWYHYLKSERRRKEEDPIETWEELKEAMRKRFV 180

Query: 181 PKHYERNLKTKLQGLRQGTKSVAEYYQEMETMMKRAKVREEEEDTMSRFLGGLNREIAHL 240
           PKHYER+LKTKLQ LRQGTKSVAEYY+EMET++ RA+++E+EEDTMSRFLGGLN+EIAHL
Sbjct: 181 PKHYERDLKTKLQSLRQGTKSVAEYYREMETLIGRARIQEDEEDTMSRFLGGLNQEIAHL 240

Query: 241 VDRNPPPYLEDMYHYALKIEDQLKEEKEHSKRYTSRTSIFSNSNTWNKDSFMNKNDSMSP 300
           VDRNPP  +EDMYHYA+KIE QLKEEKE SKRY S+T  FS+SNTWNKD F+N+N+SM  
Sbjct: 241 VDRNPPYNMEDMYHYAIKIEAQLKEEKERSKRYVSKTHTFSSSNTWNKDGFVNRNESMQS 300

Query: 301 KGKFVTAKRVEAESFNGKMNEASKTVKEKSSSIQCWKCKGFGHMSKECVNEKVMVIRNGI 360
           +GKFV A++VE ES N K  EASK V+EK+SSIQCWKCKGFGHMSK+C+N++VMV+RNG+
Sbjct: 301 RGKFVAAQKVETESSNTKKFEASKEVREKTSSIQCWKCKGFGHMSKDCINKRVMVVRNGV 360

Query: 361 LDSDDECEDHDSQLVEEI-AAYDDEYVEEGNSISLITRKEL 394
           +DS+DECE++D+QL EE     DDEY+EEG+SISLITR+ L
Sbjct: 361 IDSEDECEENDAQLEEEYETPVDDEYIEEGSSISLITRRVL 401

[Close]

BLAST of CmoCh13G003100 vs. TAIR 10
Match: ATCG00140.1 (ATP synthase subunit C family protein )

HSP 1 Score: 53.9 bits (128), Expect = 3.6e-07
Identity = 30/33 (90.91%), Postives = 32/33 (96.97%), Query Frame = 0


Query: 395 MNPLISSASVIAAGLAGGLASIGPGVGQGTAAG 428
           MNPL+S+ASVIAAGLA GLASIGPGVGQGTAAG
Sbjct: 1   MNPLVSAASVIAAGLAVGLASIGPGVGQGTAAG 33

[Close]

BLAST of CmoCh13G003100 vs. TAIR 10
Match: AT4G07350.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G40129.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 45.8 bits (107), Expect = 9.9e-05
Identity = 23/82 (28.05%), Postives = 41/82 (50.00%), Query Frame = 0


Query: 104 EAYLQWERKIEHVFDCNTYSENKKMRLAIAEFTNHASDWYQHLKSERRRKEENPIETWEE 163
           E YL+WE+ ++  F    +    +   A++  T  A  W+     +R   +E PI  W +
Sbjct: 96  EDYLEWEKNMDEWFSYKNFLSEMRFVCALSHLTGDAYKWWLQEVDDRLYYKEPPITLWRD 155

Query: 164 LKEVMRKRYAPKHYERNLKTKL 186
           LKE++R +YA +   R+ K  +
Sbjct: 156 LKELLRNKYALQASNRSRKVSV 177

The following BLAST results are available for this feature:

BLAST of CmoCh13G003100 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A8SE66	1.8e-06	96.97	ATP synthase subunit c, chloroplastic OS=Ceratophyllum demersum OX=4428 GN=atpH ...	[more]
Q4FGF2	3.9e-06	93.94	ATP synthase subunit c, chloroplastic OS=Acorus americanus OX=263995 GN=atpH PE=...	[more]
Q3V547	3.9e-06	93.94	ATP synthase subunit c, chloroplastic OS=Acorus calamus OX=4465 GN=atpH PE=3 SV=...	[more]
Q85FN2	3.9e-06	93.94	ATP synthase subunit c, chloroplastic OS=Adiantum capillus-veneris OX=13818 GN=a...	[more]
A4QJA2	3.9e-06	93.94	ATP synthase subunit c, chloroplastic OS=Aethionema cordifolium OX=434059 GN=atp...	[more]

BLAST of CmoCh13G003100 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EVI6	8.1e-172	82.44	LOW QUALITY PROTEIN: uncharacterized protein LOC111438459 OS=Cucurbita moschata ...	[more]
A0A5D3DRJ1	9.9e-162	73.57	F15O4.13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G00130 PE=4 ...	[more]
A0A5D3C3D3	9.9e-162	73.57	F15O4.13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G001490 PE=4...	[more]
A0A5D3CK70	9.9e-162	73.57	F15O4.13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold304G00110 PE=4 ...	[more]
A0A5D3BWE8	9.9e-162	73.57	F15O4.13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1738G00600 PE=4...	[more]

BLAST of CmoCh13G003100 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022932136.1	1.7e-171	82.44	LOW QUALITY PROTEIN: uncharacterized protein LOC111438459, partial [Cucurbita mo...	[more]
TYK22420.1	2.0e-161	73.57	Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]	[more]
TYK26105.1	2.0e-161	73.57	F15O4.13 [Cucumis melo var. makuwa]	[more]
TYK02449.1	2.0e-161	73.57	F15O4.13 [Cucumis melo var. makuwa]	[more]
TYK11702.1	2.0e-161	73.57	F15O4.13 [Cucumis melo var. makuwa]	[more]

BLAST of CmoCh13G003100 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00140.1	3.6e-07	90.91	ATP synthase subunit C family protein	[more]
AT4G07350.1	9.9e-05	28.05	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 30..51
None	No IPR available	PANTHER	PTHR35046:SF6	ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEIN	coord: 33..384
None	No IPR available	PANTHER	PTHR35046	ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEIN	coord: 33..384
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 327..343 e-value: 0.0061 score: 24.9
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 328..341 score: 8.845061
IPR005162	Retrotransposon gag domain	PFAM	PF03732	Retrotrans_gag	coord: 130..228 e-value: 4.8E-22 score: 78.0
IPR038662	F1F0 ATP synthase subunit C superfamily	GENE3D	1.20.20.10	F1F0 ATP synthase subunit C	coord: 391..427 e-value: 2.6E-6 score: 29.3

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh13G003100.1	CmoCh13G003100.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding