CmoCh13G002030 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTAAGGTAAAACATATCGATGGTCTCCGGCAAACCGCCGACGGTTCTGCCAATTTTCCGGCAAGCATTGGAGTCTGTCACACAGGAGCTAATCTTAGCCCAGTAGCCATTATCGGCGACGCGGTCCCTGAGCCAACCAGAATAGTCTTGCAAATAGTAGTCCAAATAGAGTCGGTTAGGGAGAGGGCGGCCGGAGCCCTTGTCGGTGACGGCGTAGGCGAAGATGATGAAGCCGAGAATGGCGGCGATGATGAAGAACATGGCGAAGAGGTAGAGCCACATGAGGAAGGTGTTGCGGTAGCAGGCGCCGCCGAAGCCAGCGAGAGAGACGACCATGATGGCGACGCCGATGACGATGAGGGGCCATTGAAGGAACTTGAGGCAGTCGGTGGTGTTGGCGTGGTTGGTTAGCCATACGCCTCCGCCGATGATGGGGAGGGAGAGGAGGAAGGTTAGGAAGTTTAGGAATCCGATCAAGTGGTTGCTGGTTCTCATGGTGGTGAGCTTCTATTTAGGTTCTTTGACTTGTGAGGAGTGGTTTTTATAATGGTTTATTTTTCCTATTAGCCAATTGGAAGTGAAATTACGAGTCTGTCCTTTGTTTTCTATGCTAGATCCTTGAAATTACTATTTTCTCCCCCTTCAGTTAGCGCACACTCACGCTGTCGAATCACGAAGGGAAAGGAGTCCATATAATATCATGGCAAAACATAGATATTGTAATGTACATGTTTGTACTCATTGTAATAGAGAAGTATCCCGATGCATGTGACTTATATTATCCATGAGTTCCCACCGTATCAATTTATGACATACGTATGATGTAAGTCATACCTCCATTCTTTTTCATGATGTAGCGTTATATGAGACATGTATATATAACACTTATCATATGTTCTGTATGTAACGTACATGACCAACGCTACGTTCAAGAATATCTTGTTGCATACTTCAAACTTTAGGTTCCTACGTCTTGCATTGGCGTAACTTTTCTATTTACTTTAGGTCGTACACATCTTCATCCTGATCTTCTGCACAACCTCATTGGTAGTTTAAGCCAACTTTGGTTCTAACAACTTGCGTTCACCCATTTTATCTCAATGTACTGAGGACCTGCATATTACCCATTATAGAGTCTCGCACAGTGTCATGTTAATGCTTGAAAACTATTATTATAGGTAAATTCCATAAGGTTCAAATTGGAGACTAAACTAGAGGAGAAATTCAACACGCAGACATGTAACATACTTTTTAGCGTTTGACCCAGATGTTTTGTCTGTTTGTCTCTTTATTGATGAAAAGCAATATTATAATCCAATTAAATGTCCAATGCTTTTTGAAGACTATATTAGATCTTGGACGTGAAACGTGGGTCCCAATCTAACATTATCGATATTGGCACTCTATGTAGTTCAACAGTATCCTTCATATAGAGTTATAGCCAACTACCTGCAGTATAAGTATCCTCTTCGGGCAAGAAATGTACGAACTTAGTAAGTTCGTCAATGATTAGCTATAACATCGTATATCCTTTTAGAATTCTAGATAAACCTCTCATGAAGTCCATTGCTAGTCCATTGCTACACAACGAAATTCATTGCCATATTTTCATATTTCCACTATGGAACATTTAGAGGTTGCAACAACCCTACCGACCTTGGTTTGTCAAAATCCATCTGTATTTATTTCATGGCTCTCACGTATTGACCCATTAGTAAATTTCTAGCATCGCCCTTCAATTATTGACTTTCACATATTTTGACCCAAACAAGACGTAGTTGTCTGATGTTGTTAGTTGTGACATTAGCAACACGTTTATTTTTACGTGATACATGTATTAGATTTATAGAATTATTGGACTAGTGATGATTTCTTAACATGGAATTCTCCGCTCCTATATAGTTAATAAAAAAAAAAATCTCTCTTCGTTCCATTCCATTTCTCATCCATTCACGGTGAATCCTTACGAGACTCCAAACTTACAAATTATTCCATTTCTCATCCATTCACGGGGAATCCTAATCCTTACTAGACTCCAAACTTACAAATTATACGAACGTCTCTAATTTAAAAGTATAATAACTTCGCTAGTTAAATAGACACGTTTAGTTTAAAATTACGAAAATAACACCGTAGTTTATAAACAAAAAAACGACAAGCCGCTAAATGGGTAATCGAAACAAAAGAAGTGCGCGCGCTGTCTCTCTGTTTAGGCCATAAACCCCAAAAGATAGAGAAAAAAGGGGATAGAAAGAAGCATTGAAACCCGAGAAACGCTGAAGAACAGCCAAACAAAAGACCAAGCTCTGCTCATGTTTATCCATTAACATTCCCTCTTTCTTCCCACTCGCAATATTCCTTCACTTCCACAGCTCCGACGAAGACGAACCCGAACGATCATTCCCCGGTAATTTTCTCCTCAATTTTTATCTATCTCAACAATGCCTTCCATTTATATATATTGATTACTGTTTCAATCTTGGATTTCATTTCTCATCCACATTGGCCCGTTTGTTTCTGTACCTAATTTTCTCGGCATCCAAACAGAGTAAAACGGAACCTCCTTCTGCTTCTTCTACTTTTTCTTGACTGATTTTTGTTTTTGAGTTCCTCTTGAACGAATTTAGTTTTCGGTTGGACTCTTTGGAGACCGATTGTGTGAGGATCTCAGGCTTTTAGGCTTTTCCAGTCTGCAAAGTGAAATCGAATCTTGGAGATACTTTTCTTGCTTTTTCTCTTTGTATGTGTGTGTGTTTGATTTTAATTTCTTTGTGTGAAAAGTGTACCAAAATTGTCTGTTGCTTTTTCTTCAACCTCAAAACTTGCTTTCATTTCCCATTTTGTGCTTTGATCCGTTTGCATTTTGAGCCGATTTCTGTTTGTTTCCTGGGAAAATTGTTTACGGAGCATGTACAGTGAAGAGCTGGGAGAAAATCATTGGTTTTTTTTTTTTTTTTTATGGCTTATTTGGAATATGAGGTTGGAGTTTTGATGAATTTCTTACAATGGAATGTAATTAAAAGGTTTAGTAGGCTTTTATGATGACTATTAAACTCATGATGGGTTTTTGTCGGCTTGTTTGTGTTAATTGTCCAAATCAAACAGTAGACTGTGCATACCTACTACTACTACTAGCCTTATTTCACGGCCAAACTGGAGGAAAAACTTTTGACATCCATTATTGGACATCTCCTGACGAGGACCCATTGTAAGAAACTAATTTTCAGTCTCTTACTTGATGCAAATGATGGCTGCGATGGGTTTTTTGAAATGCCCATCTCCTTTACCACAATCATGAGTGCTGGCTCTCTTAAGTGGTTTTGAGTTTTGGTTTTAACTTGTTGGGCGTGCTTGAGTGCACTACTAAAAGGTTATTTTCTGTAACTGTTCTAGTCTTGTTGATTTTAAATTTTGTTGGAATTTGGAAAGCACTTTTTCTCAAAGCTTTCGTTCACTTGTATCCTCAAATTAGAGATATGATCAACTTGAAAGTCTCTCTTACACACTCTCTCTCGACCAAAGCATAGGGCAGGTGATATAAAGTAAGCACCGTGACGGAGCAGATATTGTCTTTTTTGGGCTTTCCCTCGAGGTTTCTAAAACACAGTTTGTTAGGGAGAGATTTCCACACCTTTATAAAGAACGTTCCGTTCTCCTCCACAACCGATGTCAGATCTCACAATCCATACTAACGGAGGGCTTGGACTGTTTGGTTAAACTTTTTATTTATTTATTTTATTGTGGAAACGAAAGTTTAGAACATATTTCTTCTCGGCTCATATTTTTCTTCATTAGCTCCAATGACCGCTAGGCCAACCTATGAAACTCTCTTTATGGGTTGTAATTTCGAATCCCCTAAAAAGGATAATCATGTTGAGGGCATGAGAATACCTTCAGACGATGAAATATAAATCTTCTACTGTTTTTAAAATGTGTTCTTTTATAGTGCTTCCTATTTGATAACGAACAACCATTTACAACCCCTTTAATTTTTCATTCTTTACTATTGCTTTAACACTTTGTAAGTTTAATTTTGGCTTGATATGTGTGAATGTCCGCATTCATTACTAGGTAAGATTTTCCATTCGGAAACAAAGTACGAAATTAATGCTGTCACTCCTTATCCCATAGTGTCTTCAAATGTGATGATATGGACCACATGCTGTTCATCAACCACATTTATTTCCCTGTGGACAGTCCCATTGGATTCCTACCCGCCCCATGTTGTGATTCTTTATTTTAATTTTTATTGCAGAGTTGCAGGTTTGGTGAGTCAGGAAGAATTGAAGGAGGATAACATAGACTAA ATGTCTAAGGTAAAACATATCGATGGTCTCCGGCAAACCGCCGACGGTTCTGCCAATTTTCCGGCAAGCATTGGAGTCTGTCACACAGGAGCTAATCTTAGCCCAGTAGCCATTATCGGCGACGCGGTCCCTGAGCCAACCAGAATAGTCTTGCAAATAGTAGTCCAAATAGAGTCGGTTAGGGAGAGGGCGGCCGGAGCCCTTGTCGGTGACGGCGTAGGCGAAGATGATGAAGCCGAGAATGGCGGCGATGATGAAGAACATGGCGAAGAGGTAGAGCCACATGAGGAAGGTGTTGCGGTAGCAGGCGCCGCCGAAGCCAGCGAGAGAGACGACCATGATGGCGACGCCGATGACGATGAGGGGCCATTGAAGGAACTTGAGGCAGTCGGTGGTGTTGGCGTGCTCCGACGAAGACGAACCCGAACGATCATTCCCCGAGTTGCAGGTTTGGTGAGTCAGGAAGAATTGAAGGAGGATAACATAGACTAA ATGTCTAAGGTAAAACATATCGATGGTCTCCGGCAAACCGCCGACGGTTCTGCCAATTTTCCGGCAAGCATTGGAGTCTGTCACACAGGAGCTAATCTTAGCCCAGTAGCCATTATCGGCGACGCGGTCCCTGAGCCAACCAGAATAGTCTTGCAAATAGTAGTCCAAATAGAGTCGGTTAGGGAGAGGGCGGCCGGAGCCCTTGTCGGTGACGGCGTAGGCGAAGATGATGAAGCCGAGAATGGCGGCGATGATGAAGAACATGGCGAAGAGGTAGAGCCACATGAGGAAGGTGTTGCGGTAGCAGGCGCCGCCGAAGCCAGCGAGAGAGACGACCATGATGGCGACGCCGATGACGATGAGGGGCCATTGAAGGAACTTGAGGCAGTCGGTGGTGTTGGCGTGCTCCGACGAAGACGAACCCGAACGATCATTCCCCGAGTTGCAGGTTTGGTGAGTCAGGAAGAATTGAAGGAGGATAACATAGACTAA MSKVKHIDGLRQTADGSANFPASIGVCHTGANLSPVAIIGDAVPEPTRIVLQIVVQIESVRERAAGALVGDGVGEDDEAENGGDDEEHGEEVEPHEEGVAVAGAAEASERDDHDGDADDDEGPLKELEAVGGVGVLRRRRTRTIIPRVAGLVSQEELKEDNID Homology
BLAST of CmoCh13G002030 vs. ExPASy TrEMBL
Match: A0A5D3CK16 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold769G00510 PE=4 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 1.1e-28 Identity = 78/134 (58.21%), Postives = 93/134 (69.40%), Query Frame = 0
BLAST of CmoCh13G002030 vs. ExPASy TrEMBL
Match: A0A0A0LXN2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G089495 PE=4 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 1.0e-26 Identity = 76/134 (56.72%), Postives = 91/134 (67.91%), Query Frame = 0
BLAST of CmoCh13G002030 vs. ExPASy TrEMBL
Match: A0A444DMH4 (Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=GW17_00037770 PE=4 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 5.3e-23 Identity = 73/141 (51.77%), Postives = 95/141 (67.38%), Query Frame = 0
BLAST of CmoCh13G002030 vs. ExPASy TrEMBL
Match: A0A426Z6C2 (Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=B296_00012000 PE=4 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 2.0e-22 Identity = 72/142 (50.70%), Postives = 95/142 (66.90%), Query Frame = 0
BLAST of CmoCh13G002030 vs. ExPASy TrEMBL
Match: A0A5P1EUF8 (Uncharacterized protein OS=Asparagus officinalis OX=4686 GN=A4U43_C05F25580 PE=4 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 1.0e-13 Identity = 55/114 (48.25%), Postives = 74/114 (64.91%), Query Frame = 0
BLAST of CmoCh13G002030 vs. NCBI nr
Match: KAA0051919.1 (hypothetical protein E6C27_scaffold60G003730 [Cucumis melo var. makuwa] >TYK12243.1 hypothetical protein E5676_scaffold769G00510 [Cucumis melo var. makuwa]) HSP 1 Score: 136.3 bits (342), Expect = 2.3e-28 Identity = 78/134 (58.21%), Postives = 93/134 (69.40%), Query Frame = 0
BLAST of CmoCh13G002030 vs. NCBI nr
Match: RWV99326.1 (hypothetical protein GW17_00037770 [Ensete ventricosum]) HSP 1 Score: 117.5 bits (293), Expect = 1.1e-22 Identity = 73/141 (51.77%), Postives = 95/141 (67.38%), Query Frame = 0
BLAST of CmoCh13G002030 vs. NCBI nr
Match: RWW67472.1 (hypothetical protein BHE74_00025080 [Ensete ventricosum]) HSP 1 Score: 117.5 bits (293), Expect = 1.1e-22 Identity = 73/141 (51.77%), Postives = 95/141 (67.38%), Query Frame = 0
BLAST of CmoCh13G002030 vs. NCBI nr
Match: RRT59550.1 (hypothetical protein B296_00012000 [Ensete ventricosum]) HSP 1 Score: 115.5 bits (288), Expect = 4.2e-22 Identity = 72/142 (50.70%), Postives = 95/142 (66.90%), Query Frame = 0
BLAST of CmoCh13G002030 vs. NCBI nr
Match: RZS06770.1 (hypothetical protein BHM03_00037487 [Ensete ventricosum]) HSP 1 Score: 115.2 bits (287), Expect = 5.5e-22 Identity = 72/141 (51.06%), Postives = 94/141 (66.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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