CmoCh13G001650 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh13G001650
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionActin depolymerizing factor-like protein
LocationCmo_Chr13: 1067025 .. 1069057 (-)
RNA-Seq ExpressionCmoCh13G001650
SyntenyCmoCh13G001650
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTGTGGATGTGCTTTTAGGACCTGCTTGCTGTGGATCTGTATTCTGTTCTTGTTTTGATCTAGATTGTTTGAGTGTTTTTTGTCCGATTTGCCTCGGGATCGGATTTGGTTGATTTTAAATTTGTTTAGGATTGATTTCAGTATCATCGGAAGTACTTGGATTTGATCGTGACTGATCTCTGATTACCGTGGTTTAGTGGTCTCTCAAAATTGATCGGTTGTGTTTTAATCGGGCTGGGAGCTGGGTTTCGGTGTCTTCTTGTGCTTGGTTCTGTGGATTTAGATGTTTTGGTGATTGAGATGATGTTTTGGTAGTTGGTGGAAAGATGGTGACACTTCGCGTATATCATCAAGATGGTAATCTTGTGAAGTGAATTGAGTGCGTGTATTACTGTTGATAATCCGGTACATGATAATTACTCGACCGGGGCCGGGTGCCTCCAAATGAGTCCAATAGACTCGGAGAAATAGAGGGAAGAATTGGGAATGAAATGGATTTTTGATATCTAATCATGATGATGCCCACTTTTAATTTTCAATATTGCATCAAATTTCAAAAGTTGATACTTCTCTCTTGAGAGTGAAAGTGTAGCGCTATAGCCGATAGGCTGTTGAACACAACTCTTCGTGGGAAACACTTGCACTCTTTATTAATCGAGACTGCTTGGGCTTGGATTTCCTATGGATATTTATAGGCAACTACTCATTTATACCAAAAACAACGAATGTTATCTCAATGATTGTGAGAATAAGCTCTAAAGAACCATGTGGAGATCACACTGGTAACCAAGCAGATTCTATAAGTATCCAACTCTAAGGGGAATTTTACTAAAAGTGATGAAGGGCAGTGTGAATGACTCATTCAGGCATTTGATTTTGCATACTTTTCAGAGCTTTGGCTCATTGCCCTTAATCTTTATTTTCATTTTCTTACATTTTTTTTTCCTGCAGGCTAATGCGGCATCGGGTATGGCTGTGCACGATGACTGTAAGCTTAAGTTCTTGGAGTTGAAGACCAAGAGAACTTACAGATTCATTGTATATAAGATTGAAGAGAAGCAGAAGCAAGTCATTGTGGAAAAGGTTGGCGAGCCAGGTCAAAGCTATGAAGATTTCACAGCCTGCCTTCCTGCTGATGAATGCCGATATGCGGTTTATGATTTTGACTTTCTGACTAAGGAGAATGTTCAGAAGAGCAGAATTTTCTTCATTGCTTGGTAATGTCATGATAAATGAAGAAAGAAGCAAATTCTGTGTTATTCTCTGTTCCTCACCCGACCCGACCACGTATTTAAACTTCCATCACTAATCATCATTATTCTCTTTTCTTGTTGCAAAGGTCTCCCGATGTGTCGAAGGTAAGAAGCAAGATGATCTATGCAAGCTCAAAAGACAAGTTTAGAAGAGAATTGGATGGCATTCAAATTGAGCTGCAAGCTACTGACCCATCTGAAATGGATCTCGATGTTTTTAAGAGCCGTGCGAAATAAGAAGCCTCTTCGTTATGAACTTCTTGTGGTGTCTGTTTTACATTGTGAAATGATGTTATTAATTGCTGGGTTTATGAATGTGCTTTGATTACATATTGGGTTGTTTTCTAAGTTTTGTCTTATAGAATTATGTCCATCTGGAACAATCTTCGGTCATTTTTCCCGCCCACCTTATATTCTATGATTTATCGTGTGGAATTAATGCAATATCTCCTTATGTAACGCTACATGATTTTGTCTGGATTTACATCTTTTATCATGCATAGCACATTTAAAGATAATGTTGACCTTTTTTTCTAGATCCAAGGAAGCTTCTGAGCTCTGAATGGTTTGCAATGTCGACGCTTTCTAGACGGCACAGCAGCATAGGCTTTCTAATCGGGTTGCCTCAATTCTCATTTGGTAGCTCCTCTCTTCTTTGATCCTTGTTATCAATTCTTGAACAATTTAGATTTCATTAACATTTTGCAACTGTGAGGTAGAAGAAACCATGATATTCTAGGACTGCAATGAAGATTGATCCATCTTCTGTAGAAGGC

mRNA sequence

ATGCTTGTGGATGTGCTTTTAGGACCTGCTTGCTGTGGATCTGCTAATGCGGCATCGGGTATGGCTGTGCACGATGACTGTAAGCTTAAGTTCTTGGAGTTGAAGACCAAGAGAACTTACAGATTCATTGTATATAAGATTGAAGAGAAGCAGAAGCAAGTCATTGTGGAAAAGGTTGGCGAGCCAGGTCAAAGCTATGAAGATTTCACAGCCTGCCTTCCTGCTGATGAATGCCGATATGCGGTTTATGATTTTGACTTTCTGACTAAGGAGAATGTTCAGAAGAGCAGAATTTTCTTCATTGCTTGGTCTCCCGATGTGTCGAAGGTAAGAAGCAAGATGATCTATGCAAGCTCAAAAGACAAGTTTAGAAGAGAATTGGATGGCATTCAAATTGAGCTGCAAGCTACTGACCCATCTGAAATGGATCTCGATGTTTTTAAGAGCCGTGCGAAATAAGAAGCCTCTTCGTTATGAACTTCTTGTGGTGTCTGTTTTACATTGTGAAATGATGTTATTAATTGCTGGGTTTATGAATGTGCTTTGATTACATATTGGGTTGTTTTCTAAGTTTTGTCTTATAGAATTATGTCCATCTGGAACAATCTTCGGTCATTTTTCCCGCCCACCTTATATTCTATGATTTATCGTGTGGAATTAATGCAATATCTCCTTATGTAACGCTACATGATTTTGTCTGGATTTACATCTTTTATCATGCATAGCACATTTAAAGATAATGTTGACCTTTTTTTCTAGATCCAAGGAAGCTTCTGAGCTCTGAATGGTTTGCAATGTCGACGCTTTCTAGACGGCACAGCAGCATAGGCTTTCTAATCGGGTTGCCTCAATTCTCATTTGGTAGCTCCTCTCTTCTTTGATCCTTGTTATCAATTCTTGAACAATTTAGATTTCATTAACATTTTGCAACTGTGAGGTAGAAGAAACCATGATATTCTAGGACTGCAATGAAGATTGATCCATCTTCTGTAGAAGGC

Coding sequence (CDS)

ATGCTTGTGGATGTGCTTTTAGGACCTGCTTGCTGTGGATCTGCTAATGCGGCATCGGGTATGGCTGTGCACGATGACTGTAAGCTTAAGTTCTTGGAGTTGAAGACCAAGAGAACTTACAGATTCATTGTATATAAGATTGAAGAGAAGCAGAAGCAAGTCATTGTGGAAAAGGTTGGCGAGCCAGGTCAAAGCTATGAAGATTTCACAGCCTGCCTTCCTGCTGATGAATGCCGATATGCGGTTTATGATTTTGACTTTCTGACTAAGGAGAATGTTCAGAAGAGCAGAATTTTCTTCATTGCTTGGTCTCCCGATGTGTCGAAGGTAAGAAGCAAGATGATCTATGCAAGCTCAAAAGACAAGTTTAGAAGAGAATTGGATGGCATTCAAATTGAGCTGCAAGCTACTGACCCATCTGAAATGGATCTCGATGTTTTTAAGAGCCGTGCGAAATAA

Protein sequence

MLVDVLLGPACCGSANAASGMAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQVIVEKVGEPGQSYEDFTACLPADECRYAVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIELQATDPSEMDLDVFKSRAK
Homology
[Close]
BLAST of CmoCh13G001650 vs. ExPASy Swiss-Prot
Match: Q9FVI1 (Actin-depolymerizing factor 2 OS=Petunia hybrida OX=4102 GN=ADF2 PE=2 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 1.9e-64
Identity = 118/137 (86.13%), Postives = 131/137 (95.62%), Query Frame = 0 

Query: 15  ANAASGMAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQVIVEKVGEPGQSYEDFTACLP 74
           ANAASGMAVHDDCKLKFLELK KRTYRFI+YKIEEKQK+V+VEK+GEP +SYEDFTA LP
Sbjct: 2   ANAASGMAVHDDCKLKFLELKAKRTYRFIIYKIEEKQKEVVVEKLGEPTESYEDFTAGLP 61

Query: 75  ADECRYAVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIEL 134
           ADECRYAVYDFDF+TKEN QKSRIFFIAWSPD ++VRSKMIYASSKD+F+RELDGIQ+EL
Sbjct: 62  ADECRYAVYDFDFMTKENHQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVEL 121

Query: 135 QATDPSEMDLDVFKSRA 152
           QATDP+EM LDVF+SRA
Sbjct: 122 QATDPTEMGLDVFRSRA 138

[Close]
BLAST of CmoCh13G001650 vs. ExPASy Swiss-Prot
Match: Q39250 (Actin-depolymerizing factor 1 OS=Arabidopsis thaliana OX=3702 GN=ADF1 PE=1 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 5.6e-64
Identity = 115/137 (83.94%), Postives = 131/137 (95.62%), Query Frame = 0 

Query: 15  ANAASGMAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQVIVEKVGEPGQSYEDFTACLP 74
           ANAASGMAVHDDCKL+FLELK KRT+RFIVYKIEEKQKQV+VEKVG+P Q+YE+F ACLP
Sbjct: 2   ANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLP 61

Query: 75  ADECRYAVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIEL 134
           ADECRYA+YDFDF+T EN QKS+IFFIAW PD++KVRSKMIYASSKD+F+RELDGIQ+EL
Sbjct: 62  ADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVEL 121

Query: 135 QATDPSEMDLDVFKSRA 152
           QATDP+EMDLDVF+SRA
Sbjct: 122 QATDPTEMDLDVFRSRA 138

[Close]
BLAST of CmoCh13G001650 vs. ExPASy Swiss-Prot
Match: Q9ZSK3 (Actin-depolymerizing factor 4 OS=Arabidopsis thaliana OX=3702 GN=ADF4 PE=1 SV=2)

HSP 1 Score: 239.2 bits (609), Expect = 3.1e-62
Identity = 116/136 (85.29%), Postives = 127/136 (93.38%), Query Frame = 0 

Query: 15  ANAASGMAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQVIVEKVGEPGQSYEDFTACLP 74
           ANAASGMAVHDDCKL+FLELK KRT+RFIVYKIEEKQKQVIVEKVGEP  +YEDF A LP
Sbjct: 2   ANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASLP 61

Query: 75  ADECRYAVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIEL 134
           ADECRYA+YDFDF+T EN QKS+IFFIAW PDV+KVRSKMIYASSKD+F+RELDGIQ+EL
Sbjct: 62  ADECRYAIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVEL 121

Query: 135 QATDPSEMDLDVFKSR 151
           QATDP+EMDLDV KSR
Sbjct: 122 QATDPTEMDLDVLKSR 137

[Close]
BLAST of CmoCh13G001650 vs. ExPASy Swiss-Prot
Match: Q9ZSK4 (Actin-depolymerizing factor 3 OS=Arabidopsis thaliana OX=3702 GN=ADF3 PE=1 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 8.9e-62
Identity = 111/137 (81.02%), Postives = 129/137 (94.16%), Query Frame = 0 

Query: 15  ANAASGMAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQVIVEKVGEPGQSYEDFTACLP 74
           ANAASGMAVHDDCKLKF+ELKTKRT+RFI+YKIEE QKQVIVEK+GEPGQ++ED  A LP
Sbjct: 2   ANAASGMAVHDDCKLKFMELKTKRTHRFIIYKIEELQKQVIVEKIGEPGQTHEDLAASLP 61

Query: 75  ADECRYAVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIEL 134
           ADECRYA++DFDF++ E V +SRIFF+AWSPD ++VRSKMIYASSKD+F+RELDGIQ+EL
Sbjct: 62  ADECRYAIFDFDFVSSEGVPRSRIFFVAWSPDTARVRSKMIYASSKDRFKRELDGIQVEL 121

Query: 135 QATDPSEMDLDVFKSRA 152
           QATDP+EMDLDVFKSRA
Sbjct: 122 QATDPTEMDLDVFKSRA 138

[Close]
BLAST of CmoCh13G001650 vs. ExPASy Swiss-Prot
Match: Q9FVI2 (Actin-depolymerizing factor 1 OS=Petunia hybrida OX=4102 GN=ADF1 PE=2 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 4.9e-60
Identity = 111/137 (81.02%), Postives = 125/137 (91.24%), Query Frame = 0 

Query: 15  ANAASGMAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQVIVEKVGEPGQSYEDFTACLP 74
           ANAASGMAVHDDCKL+FLELK KRT+RFIVYKIEEKQKQV+VEK+GEP +SYEDF A LP
Sbjct: 2   ANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKIGEPTESYEDFAASLP 61

Query: 75  ADECRYAVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIEL 134
            +ECRYAVYDFDF+T EN QKSRIFFIAW PD ++VRSKMIYASSKD+F+RELDGIQ+EL
Sbjct: 62  ENECRYAVYDFDFVTAENCQKSRIFFIAWCPDTARVRSKMIYASSKDRFKRELDGIQVEL 121

Query: 135 QATDPSEMDLDVFKSRA 152
           QA DP+EM LDV +SRA
Sbjct: 122 QACDPTEMGLDVIQSRA 138

[Close]
BLAST of CmoCh13G001650 vs. ExPASy TrEMBL
Match: A0A6J1HYW9 (actin-depolymerizing factor 2-like OS=Cucurbita maxima OX=3661 GN=LOC111469374 PE=3 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 3.7e-71
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0 

Query: 15  ANAASGMAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQVIVEKVGEPGQSYEDFTACLP 74
           ANAASGMAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQVIVEKVGEPGQSYEDFTACLP
Sbjct: 2   ANAASGMAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQVIVEKVGEPGQSYEDFTACLP 61

Query: 75  ADECRYAVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIEL 134
           ADECRYAVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIEL
Sbjct: 62  ADECRYAVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIEL 121

Query: 135 QATDPSEMDLDVFKSRAK 153
           QATDPSEMDLDVFKSRAK
Sbjct: 122 QATDPSEMDLDVFKSRAK 139

[Close]
BLAST of CmoCh13G001650 vs. ExPASy TrEMBL
Match: A0A6J1HNW0 (actin-depolymerizing factor 2-like OS=Cucurbita moschata OX=3662 GN=LOC111464666 PE=3 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 3.7e-71
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0 

Query: 15  ANAASGMAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQVIVEKVGEPGQSYEDFTACLP 74
           ANAASGMAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQVIVEKVGEPGQSYEDFTACLP
Sbjct: 2   ANAASGMAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQVIVEKVGEPGQSYEDFTACLP 61

Query: 75  ADECRYAVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIEL 134
           ADECRYAVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIEL
Sbjct: 62  ADECRYAVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIEL 121

Query: 135 QATDPSEMDLDVFKSRAK 153
           QATDPSEMDLDVFKSRAK
Sbjct: 122 QATDPSEMDLDVFKSRAK 139

[Close]
BLAST of CmoCh13G001650 vs. ExPASy TrEMBL
Match: A0A6J1DU41 (actin-depolymerizing factor 2 OS=Momordica charantia OX=3673 GN=LOC111023124 PE=3 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 1.3e-68
Identity = 132/138 (95.65%), Postives = 136/138 (98.55%), Query Frame = 0 

Query: 15  ANAASGMAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQVIVEKVGEPGQSYEDFTACLP 74
           ANAASGMAVHDDCKLKFLELKTKRTYR+IVYKIEEKQKQVIVEK+GEPGQSYEDFTACLP
Sbjct: 2   ANAASGMAVHDDCKLKFLELKTKRTYRYIVYKIEEKQKQVIVEKLGEPGQSYEDFTACLP 61

Query: 75  ADECRYAVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIEL 134
           ADECRYAVYDFDFLTKENVQKSRIFFIAWSPD+SKVRSKMIYASSKDKFRRELDGIQIEL
Sbjct: 62  ADECRYAVYDFDFLTKENVQKSRIFFIAWSPDISKVRSKMIYASSKDKFRRELDGIQIEL 121

Query: 135 QATDPSEMDLDVFKSRAK 153
           QATDP+EM LDVF SRAK
Sbjct: 122 QATDPTEMGLDVFNSRAK 139

[Close]
BLAST of CmoCh13G001650 vs. ExPASy TrEMBL
Match: A0A6J1K8K8 (actin-depolymerizing factor 2-like OS=Cucurbita maxima OX=3661 GN=LOC111492671 PE=3 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 6.6e-68
Identity = 132/138 (95.65%), Postives = 135/138 (97.83%), Query Frame = 0 

Query: 15  ANAASGMAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQVIVEKVGEPGQSYEDFTACLP 74
           ANAASGMAVHD+CKLKFLELKTKRTYR+IVYKIEEKQKQVIVEKVGEP QSYEDFTACLP
Sbjct: 2   ANAASGMAVHDECKLKFLELKTKRTYRYIVYKIEEKQKQVIVEKVGEPSQSYEDFTACLP 61

Query: 75  ADECRYAVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIEL 134
           ADECRYAVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIEL
Sbjct: 62  ADECRYAVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIEL 121

Query: 135 QATDPSEMDLDVFKSRAK 153
           QATDP+EM LDVF SRAK
Sbjct: 122 QATDPTEMGLDVFNSRAK 139

[Close]
BLAST of CmoCh13G001650 vs. ExPASy TrEMBL
Match: A0A6J1GA03 (actin-depolymerizing factor 2-like OS=Cucurbita moschata OX=3662 GN=LOC111452299 PE=3 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 8.6e-68
Identity = 131/138 (94.93%), Postives = 135/138 (97.83%), Query Frame = 0 

Query: 15  ANAASGMAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQVIVEKVGEPGQSYEDFTACLP 74
           ANAASGMAVHD+CKLKFLELKTKRTYR+IVYKIEEKQKQVIVEKVGEP QSYEDFTACLP
Sbjct: 2   ANAASGMAVHDECKLKFLELKTKRTYRYIVYKIEEKQKQVIVEKVGEPSQSYEDFTACLP 61

Query: 75  ADECRYAVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIEL 134
           ADECRYAVYDFDFLTKENVQKSRIFFIAWSPD+SKVRSKMIYASSKDKFRRELDGIQIEL
Sbjct: 62  ADECRYAVYDFDFLTKENVQKSRIFFIAWSPDISKVRSKMIYASSKDKFRRELDGIQIEL 121

Query: 135 QATDPSEMDLDVFKSRAK 153
           QATDP+EM LDVF SRAK
Sbjct: 122 QATDPTEMGLDVFNSRAK 139

[Close]
BLAST of CmoCh13G001650 vs. NCBI nr
Match: XP_022964654.1 (actin-depolymerizing factor 2-like [Cucurbita moschata] >XP_022970372.1 actin-depolymerizing factor 2-like [Cucurbita maxima] >XP_023519424.1 actin-depolymerizing factor 2-like [Cucurbita pepo subsp. pepo] >KAG6583469.1 Actin-depolymerizing factor 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019224.1 Actin-depolymerizing factor 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 277.3 bits (708), Expect = 7.7e-71
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0 

Query: 15  ANAASGMAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQVIVEKVGEPGQSYEDFTACLP 74
           ANAASGMAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQVIVEKVGEPGQSYEDFTACLP
Sbjct: 2   ANAASGMAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQVIVEKVGEPGQSYEDFTACLP 61

Query: 75  ADECRYAVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIEL 134
           ADECRYAVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIEL
Sbjct: 62  ADECRYAVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIEL 121

Query: 135 QATDPSEMDLDVFKSRAK 153
           QATDPSEMDLDVFKSRAK
Sbjct: 122 QATDPSEMDLDVFKSRAK 139

[Close]
BLAST of CmoCh13G001650 vs. NCBI nr
Match: XP_022156171.1 (actin-depolymerizing factor 2 [Momordica charantia])

HSP 1 Score: 268.9 bits (686), Expect = 2.8e-68
Identity = 132/138 (95.65%), Postives = 136/138 (98.55%), Query Frame = 0 

Query: 15  ANAASGMAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQVIVEKVGEPGQSYEDFTACLP 74
           ANAASGMAVHDDCKLKFLELKTKRTYR+IVYKIEEKQKQVIVEK+GEPGQSYEDFTACLP
Sbjct: 2   ANAASGMAVHDDCKLKFLELKTKRTYRYIVYKIEEKQKQVIVEKLGEPGQSYEDFTACLP 61

Query: 75  ADECRYAVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIEL 134
           ADECRYAVYDFDFLTKENVQKSRIFFIAWSPD+SKVRSKMIYASSKDKFRRELDGIQIEL
Sbjct: 62  ADECRYAVYDFDFLTKENVQKSRIFFIAWSPDISKVRSKMIYASSKDKFRRELDGIQIEL 121

Query: 135 QATDPSEMDLDVFKSRAK 153
           QATDP+EM LDVF SRAK
Sbjct: 122 QATDPTEMGLDVFNSRAK 139

[Close]
BLAST of CmoCh13G001650 vs. NCBI nr
Match: XP_022997831.1 (actin-depolymerizing factor 2-like [Cucurbita maxima])

HSP 1 Score: 266.5 bits (680), Expect = 1.4e-67
Identity = 132/138 (95.65%), Postives = 135/138 (97.83%), Query Frame = 0 

Query: 15  ANAASGMAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQVIVEKVGEPGQSYEDFTACLP 74
           ANAASGMAVHD+CKLKFLELKTKRTYR+IVYKIEEKQKQVIVEKVGEP QSYEDFTACLP
Sbjct: 2   ANAASGMAVHDECKLKFLELKTKRTYRYIVYKIEEKQKQVIVEKVGEPSQSYEDFTACLP 61

Query: 75  ADECRYAVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIEL 134
           ADECRYAVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIEL
Sbjct: 62  ADECRYAVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIEL 121

Query: 135 QATDPSEMDLDVFKSRAK 153
           QATDP+EM LDVF SRAK
Sbjct: 122 QATDPTEMGLDVFNSRAK 139

[Close]
BLAST of CmoCh13G001650 vs. NCBI nr
Match: XP_022948707.1 (actin-depolymerizing factor 2-like [Cucurbita moschata] >XP_023521573.1 actin-depolymerizing factor 2-like [Cucurbita pepo subsp. pepo] >XP_023523187.1 actin-depolymerizing factor 2-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023523188.1 actin-depolymerizing factor 2-like isoform X2 [Cucurbita pepo subsp. pepo] >KAG6607202.1 Actin-depolymerizing factor 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036888.1 Actin-depolymerizing factor 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 266.2 bits (679), Expect = 1.8e-67
Identity = 131/138 (94.93%), Postives = 135/138 (97.83%), Query Frame = 0 

Query: 15  ANAASGMAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQVIVEKVGEPGQSYEDFTACLP 74
           ANAASGMAVHD+CKLKFLELKTKRTYR+IVYKIEEKQKQVIVEKVGEP QSYEDFTACLP
Sbjct: 2   ANAASGMAVHDECKLKFLELKTKRTYRYIVYKIEEKQKQVIVEKVGEPSQSYEDFTACLP 61

Query: 75  ADECRYAVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIEL 134
           ADECRYAVYDFDFLTKENVQKSRIFFIAWSPD+SKVRSKMIYASSKDKFRRELDGIQIEL
Sbjct: 62  ADECRYAVYDFDFLTKENVQKSRIFFIAWSPDISKVRSKMIYASSKDKFRRELDGIQIEL 121

Query: 135 QATDPSEMDLDVFKSRAK 153
           QATDP+EM LDVF SRAK
Sbjct: 122 QATDPTEMGLDVFNSRAK 139

[Close]
BLAST of CmoCh13G001650 vs. NCBI nr
Match: XP_008457551.1 (PREDICTED: actin-depolymerizing factor 2 [Cucumis melo] >ADN34239.1 actin depolymerizing factor-like protein [Cucumis melo subsp. melo] >KAA0033926.1 actin-depolymerizing factor 2 [Cucumis melo var. makuwa] >TYK02902.1 actin-depolymerizing factor 2 [Cucumis melo var. makuwa])

HSP 1 Score: 265.8 bits (678), Expect = 2.3e-67
Identity = 132/138 (95.65%), Postives = 134/138 (97.10%), Query Frame = 0 

Query: 15  ANAASGMAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQVIVEKVGEPGQSYEDFTACLP 74
           ANAASGMAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQV VEKVGEPGQSYEDFTACLP
Sbjct: 2   ANAASGMAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQVTVEKVGEPGQSYEDFTACLP 61

Query: 75  ADECRYAVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIEL 134
           ADECRYAVYDF+FLT+ NV KSRIFFIAWSPD SKVRSKMIYASSKDKFRRELDGIQIEL
Sbjct: 62  ADECRYAVYDFEFLTEGNVPKSRIFFIAWSPDTSKVRSKMIYASSKDKFRRELDGIQIEL 121

Query: 135 QATDPSEMDLDVFKSRAK 153
           QATDPSEMDLDVFKSRAK
Sbjct: 122 QATDPSEMDLDVFKSRAK 139

[Close]
BLAST of CmoCh13G001650 vs. TAIR 10
Match: AT3G46010.2 (actin depolymerizing factor 1 )

HSP 1 Score: 246.5 bits (628), Expect = 1.4e-65
Identity = 116/138 (84.06%), Postives = 132/138 (95.65%), Query Frame = 0 

Query: 14  SANAASGMAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQVIVEKVGEPGQSYEDFTACL 73
           SANAASGMAVHDDCKL+FLELK KRT+RFIVYKIEEKQKQV+VEKVG+P Q+YE+F ACL
Sbjct: 12  SANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACL 71

Query: 74  PADECRYAVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIE 133
           PADECRYA+YDFDF+T EN QKS+IFFIAW PD++KVRSKMIYASSKD+F+RELDGIQ+E
Sbjct: 72  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVE 131

Query: 134 LQATDPSEMDLDVFKSRA 152
           LQATDP+EMDLDVF+SRA
Sbjct: 132 LQATDPTEMDLDVFRSRA 149

[Close]
BLAST of CmoCh13G001650 vs. TAIR 10
Match: AT3G46010.1 (actin depolymerizing factor 1 )

HSP 1 Score: 245.0 bits (624), Expect = 4.0e-65
Identity = 115/137 (83.94%), Postives = 131/137 (95.62%), Query Frame = 0 

Query: 15  ANAASGMAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQVIVEKVGEPGQSYEDFTACLP 74
           ANAASGMAVHDDCKL+FLELK KRT+RFIVYKIEEKQKQV+VEKVG+P Q+YE+F ACLP
Sbjct: 2   ANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLP 61

Query: 75  ADECRYAVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIEL 134
           ADECRYA+YDFDF+T EN QKS+IFFIAW PD++KVRSKMIYASSKD+F+RELDGIQ+EL
Sbjct: 62  ADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVEL 121

Query: 135 QATDPSEMDLDVFKSRA 152
           QATDP+EMDLDVF+SRA
Sbjct: 122 QATDPTEMDLDVFRSRA 138

[Close]
BLAST of CmoCh13G001650 vs. TAIR 10
Match: AT5G59890.1 (actin depolymerizing factor 4 )

HSP 1 Score: 239.2 bits (609), Expect = 2.2e-63
Identity = 116/136 (85.29%), Postives = 127/136 (93.38%), Query Frame = 0 

Query: 15  ANAASGMAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQVIVEKVGEPGQSYEDFTACLP 74
           ANAASGMAVHDDCKL+FLELK KRT+RFIVYKIEEKQKQVIVEKVGEP  +YEDF A LP
Sbjct: 2   ANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASLP 61

Query: 75  ADECRYAVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIEL 134
           ADECRYA+YDFDF+T EN QKS+IFFIAW PDV+KVRSKMIYASSKD+F+RELDGIQ+EL
Sbjct: 62  ADECRYAIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVEL 121

Query: 135 QATDPSEMDLDVFKSR 151
           QATDP+EMDLDV KSR
Sbjct: 122 QATDPTEMDLDVLKSR 137

[Close]
BLAST of CmoCh13G001650 vs. TAIR 10
Match: AT5G59880.1 (actin depolymerizing factor 3 )

HSP 1 Score: 237.7 bits (605), Expect = 6.3e-63
Identity = 111/137 (81.02%), Postives = 129/137 (94.16%), Query Frame = 0 

Query: 15  ANAASGMAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQVIVEKVGEPGQSYEDFTACLP 74
           ANAASGMAVHDDCKLKF+ELKTKRT+RFI+YKIEE QKQVIVEK+GEPGQ++ED  A LP
Sbjct: 2   ANAASGMAVHDDCKLKFMELKTKRTHRFIIYKIEELQKQVIVEKIGEPGQTHEDLAASLP 61

Query: 75  ADECRYAVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIEL 134
           ADECRYA++DFDF++ E V +SRIFF+AWSPD ++VRSKMIYASSKD+F+RELDGIQ+EL
Sbjct: 62  ADECRYAIFDFDFVSSEGVPRSRIFFVAWSPDTARVRSKMIYASSKDRFKRELDGIQVEL 121

Query: 135 QATDPSEMDLDVFKSRA 152
           QATDP+EMDLDVFKSRA
Sbjct: 122 QATDPTEMDLDVFKSRA 138

[Close]
BLAST of CmoCh13G001650 vs. TAIR 10
Match: AT5G59890.2 (actin depolymerizing factor 4 )

HSP 1 Score: 228.4 bits (581), Expect = 3.8e-60
Identity = 110/130 (84.62%), Postives = 121/130 (93.08%), Query Frame = 0 

Query: 21  MAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQVIVEKVGEPGQSYEDFTACLPADECRY 80
           MAVHDDCKL+FLELK KRT+RFIVYKIEEKQKQVIVEKVGEP  +YEDF A LPADECRY
Sbjct: 1   MAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASLPADECRY 60

Query: 81  AVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIELQATDPS 140
           A+YDFDF+T EN QKS+IFFIAW PDV+KVRSKMIYASSKD+F+RELDGIQ+ELQATDP+
Sbjct: 61  AIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVELQATDPT 120

Query: 141 EMDLDVFKSR 151
           EMDLDV KSR
Sbjct: 121 EMDLDVLKSR 130

The following BLAST results are available for this feature:
BLAST of CmoCh13G001650 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FVI11.9e-6486.13Actin-depolymerizing factor 2 OS=Petunia hybrida OX=4102 GN=ADF2 PE=2 SV=1[more]
Q392505.6e-6483.94Actin-depolymerizing factor 1 OS=Arabidopsis thaliana OX=3702 GN=ADF1 PE=1 SV=1[more]
Q9ZSK33.1e-6285.29Actin-depolymerizing factor 4 OS=Arabidopsis thaliana OX=3702 GN=ADF4 PE=1 SV=2[more]
Q9ZSK48.9e-6281.02Actin-depolymerizing factor 3 OS=Arabidopsis thaliana OX=3702 GN=ADF3 PE=1 SV=1[more]
Q9FVI24.9e-6081.02Actin-depolymerizing factor 1 OS=Petunia hybrida OX=4102 GN=ADF1 PE=2 SV=1[more]
BLAST of CmoCh13G001650 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1HYW93.7e-71100.00actin-depolymerizing factor 2-like OS=Cucurbita maxima OX=3661 GN=LOC111469374 P... [more]
A0A6J1HNW03.7e-71100.00actin-depolymerizing factor 2-like OS=Cucurbita moschata OX=3662 GN=LOC111464666... [more]
A0A6J1DU411.3e-6895.65actin-depolymerizing factor 2 OS=Momordica charantia OX=3673 GN=LOC111023124 PE=... [more]
A0A6J1K8K86.6e-6895.65actin-depolymerizing factor 2-like OS=Cucurbita maxima OX=3661 GN=LOC111492671 P... [more]
A0A6J1GA038.6e-6894.93actin-depolymerizing factor 2-like OS=Cucurbita moschata OX=3662 GN=LOC111452299... [more]
BLAST of CmoCh13G001650 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022964654.17.7e-71100.00actin-depolymerizing factor 2-like [Cucurbita moschata] >XP_022970372.1 actin-de... [more]
XP_022156171.12.8e-6895.65actin-depolymerizing factor 2 [Momordica charantia][more]
XP_022997831.11.4e-6795.65actin-depolymerizing factor 2-like [Cucurbita maxima][more]
XP_022948707.11.8e-6794.93actin-depolymerizing factor 2-like [Cucurbita moschata] >XP_023521573.1 actin-de... [more]
XP_008457551.12.3e-6795.65PREDICTED: actin-depolymerizing factor 2 [Cucumis melo] >ADN34239.1 actin depoly... [more]
BLAST of CmoCh13G001650 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G46010.21.4e-6584.06actin depolymerizing factor 1 [more]
AT3G46010.14.0e-6583.94actin depolymerizing factor 1 [more]
AT5G59890.12.2e-6385.29actin depolymerizing factor 4 [more]
AT5G59880.16.3e-6381.02actin depolymerizing factor 3 [more]
AT5G59890.23.8e-6084.62actin depolymerizing factor 4 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002108Actin-depolymerising factor homology domainSMARTSM00102adf_2coord: 25..152
e-value: 1.1E-58
score: 210.9
IPR002108Actin-depolymerising factor homology domainPFAMPF00241Cofilin_ADFcoord: 27..149
e-value: 6.4E-37
score: 126.1
IPR002108Actin-depolymerising factor homology domainPROSITEPS51263ADF_Hcoord: 18..152
score: 37.663551
IPR029006ADF-H/Gelsolin-like domain superfamilyGENE3D3.40.20.10Severincoord: 10..152
e-value: 4.4E-52
score: 178.1
IPR017904ADF/CofilinPANTHERPTHR11913COFILIN-RELATEDcoord: 15..151
IPR017904ADF/CofilinCDDcd11286ADF_cofilin_likecoord: 19..151
e-value: 1.16661E-65
score: 194.313
NoneNo IPR availablePANTHERPTHR11913:SF74ACTIN-DEPOLYMERIZING FACTOR 2-LIKEcoord: 15..151
NoneNo IPR availableSUPERFAMILY55753Actin depolymerizing proteinscoord: 14..151

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh13G001650.1CmoCh13G001650.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030042 actin filament depolymerization
cellular_component GO:0015629 actin cytoskeleton
cellular_component GO:0005737 cytoplasm
molecular_function GO:0051015 actin filament binding
molecular_function GO:0003779 actin binding