CmoCh13G000920 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh13G000920
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	18.5 kDa class I heat shock protein-like
Location	Cmo_Chr13: 543065 .. 543553 (+)
RNA-Seq Expression	CmoCh13G000920
Synteny	CmoCh13G000920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGATGATTCCAAGCTTTTTCGGTGGCCGACGGAGCAGCATCTTCGATCCATTTGCCACTTTCGATCTCTTAGATCCGTTCGATTTTCACTTTCCCTCTTCTATTTCATCTTACTTCCCTGAAATCGCTCGAGATACTTCTGATCTGATGAACGCTGCTGTTGATTGGAAGGAGACGCCGGAGGCTCATGTAATGAAAGCCGATCTGCCTGGACTGAAGAAAGACGAAGTGAAAGTGGAGATAGAAGAGGGAAAAGTGCTTCAGATCAGCGGCCGAAGGAGCGTAGAGAAAGAGGACATAAACGAGAAATGGCATCGGATCGAACGAAGCAGTGGGAAGTTCCAGACGAGATTCCGGCTACCAGAGGATGCGAAAATGGAGGAAATTAGGGCATCAATGGAGGACGGTGTTCTCACGGTGACGGTTCCCAAGGCCAAGGCGGAAGAAAAGAACGCGGAGGTGAAGTCAGTTGAGATTTCCGGCTAA

mRNA sequence

ATGTCGATGATTCCAAGCTTTTTCGGTGGCCGACGGAGCAGCATCTTCGATCCATTTGCCACTTTCGATCTCTTAGATCCGTTCGATTTTCACTTTCCCTCTTCTATTTCATCTTACTTCCCTGAAATCGCTCGAGATACTTCTGATCTGATGAACGCTGCTGTTGATTGGAAGGAGACGCCGGAGGCTCATGTAATGAAAGCCGATCTGCCTGGACTGAAGAAAGACGAAGTGAAAGTGGAGATAGAAGAGGGAAAAGTGCTTCAGATCAGCGGCCGAAGGAGCGTAGAGAAAGAGGACATAAACGAGAAATGGCATCGGATCGAACGAAGCAGTGGGAAGTTCCAGACGAGATTCCGGCTACCAGAGGATGCGAAAATGGAGGAAATTAGGGCATCAATGGAGGACGGTGTTCTCACGGTGACGGTTCCCAAGGCCAAGGCGGAAGAAAAGAACGCGGAGGTGAAGTCAGTTGAGATTTCCGGCTAA

Coding sequence (CDS)

ATGTCGATGATTCCAAGCTTTTTCGGTGGCCGACGGAGCAGCATCTTCGATCCATTTGCCACTTTCGATCTCTTAGATCCGTTCGATTTTCACTTTCCCTCTTCTATTTCATCTTACTTCCCTGAAATCGCTCGAGATACTTCTGATCTGATGAACGCTGCTGTTGATTGGAAGGAGACGCCGGAGGCTCATGTAATGAAAGCCGATCTGCCTGGACTGAAGAAAGACGAAGTGAAAGTGGAGATAGAAGAGGGAAAAGTGCTTCAGATCAGCGGCCGAAGGAGCGTAGAGAAAGAGGACATAAACGAGAAATGGCATCGGATCGAACGAAGCAGTGGGAAGTTCCAGACGAGATTCCGGCTACCAGAGGATGCGAAAATGGAGGAAATTAGGGCATCAATGGAGGACGGTGTTCTCACGGTGACGGTTCCCAAGGCCAAGGCGGAAGAAAAGAACGCGGAGGTGAAGTCAGTTGAGATTTCCGGCTAA

Protein sequence

MSMIPSFFGGRRSSIFDPFATFDLLDPFDFHFPSSISSYFPEIARDTSDLMNAAVDWKETPEAHVMKADLPGLKKDEVKVEIEEGKVLQISGRRSVEKEDINEKWHRIERSSGKFQTRFRLPEDAKMEEIRASMEDGVLTVTVPKAKAEEKNAEVKSVEISG

Homology

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BLAST of CmoCh13G000920 vs. ExPASy Swiss-Prot
Match: P05478 (18.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP18.5-C PE=3 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 2.8e-53
Identity = 108/164 (65.85%), Postives = 138/164 (84.15%), Query Frame = 0


Query: 1   MSMIPSFFGGRRSSIFDPFATFDLLDPF-DFHFPSSISS-YFPEIARDTSDLMNAAVDWK 60
           MS+IP+FFGGRR+++FDPF + D+ DPF DF FP+++SS  FPE +R+ S  ++  VDWK
Sbjct: 1   MSLIPNFFGGRRNNVFDPF-SLDVWDPFKDFPFPNTLSSASFPEFSRENSAFVSTRVDWK 60

Query: 61  ETPEAHVMKADLPGLKKDEVKVEIEEGKVLQISGRRSVEKEDINEKWHRIERSSGKFQTR 120
           ETPEAHV KAD+PGLKK+EVKV+IE+ KVLQISG R+VEKED N+ WHR+ERSSGKF  R
Sbjct: 61  ETPEAHVFKADIPGLKKEEVKVQIEDDKVLQISGERNVEKEDKNDTWHRVERSSGKFMRR 120

Query: 121 FRLPEDAKMEEIRASMEDGVLTVTVPKAKAEEKNAEVKSVEISG 163
           FRLPE+AK+E+++ASME+GVLTVTVP  K E K  +VK++EISG
Sbjct: 121 FRLPENAKVEQVKASMENGVLTVTVP--KEEVKKPDVKAIEISG 161

[Close]

BLAST of CmoCh13G000920 vs. ExPASy Swiss-Prot
Match: P27880 (18.2 kDa class I heat shock protein OS=Medicago sativa OX=3879 GN=HSP18.2 PE=2 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 7.5e-51
Identity = 108/164 (65.85%), Postives = 136/164 (82.93%), Query Frame = 0


Query: 1   MSMIPSFFGGRRSSIFDPFATFDLLDPF-DFHF-PSSISSYFPEIARDTSDLMNAAVDWK 60
           MS+IPSFFGGRRS++FDPF + D+ DPF DF F  S++S+ FP   R+ S  ++  VDWK
Sbjct: 1   MSLIPSFFGGRRSNVFDPF-SLDVWDPFKDFPFNNSALSASFP---RENSAFVSTRVDWK 60

Query: 61  ETPEAHVMKADLPGLKKDEVKVEIEEGKVLQISGRRSVEKEDINEKWHRIERSSGKFQTR 120
           ETPEAHV KADLPG+KK+EVKVEIE+ +VLQISG RSVEKED N++WHR+ERSSGKF  R
Sbjct: 61  ETPEAHVFKADLPGMKKEEVKVEIEDDRVLQISGERSVEKEDKNDQWHRLERSSGKFMRR 120

Query: 121 FRLPEDAKMEEIRASMEDGVLTVTVPKAKAEEKNAEVKSVEISG 163
           FRLPE+AKM++++A+ME+GVLTVTVP  K E K  EVK+++ISG
Sbjct: 121 FRLPENAKMDQVKAAMENGVLTVTVP--KEEVKKPEVKTIDISG 158

[Close]

BLAST of CmoCh13G000920 vs. ExPASy Swiss-Prot
Match: P19037 (18.1 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP18.1 PE=1 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 9.9e-51
Identity = 105/162 (64.81%), Postives = 127/162 (78.40%), Query Frame = 0


Query: 1   MSMIPSFFGGRRSSIFDPFATFDLLDPFDFHFPSSISSYFPEIARDTSDLMNAAVDWKET 60
           MS+IPS FGGRRS++FDPF+  DL DPF+  F  S +      ARD +   NA VDWKET
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSQ-DLWDPFEGFFTPSSALANASTARDVAAFTNARVDWKET 60

Query: 61  PEAHVMKADLPGLKKDEVKVEIEEGKVLQISGRRSVEKEDINEKWHRIERSSGKFQTRFR 120
           PEAHV KADLPGLKK+EVKVE+E+  VLQISG RS E E+ N+KWHR+ER+SGKF  RFR
Sbjct: 61  PEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFR 120

Query: 121 LPEDAKMEEIRASMEDGVLTVTVPKAKAEEKNAEVKSVEISG 163
           LPE+AKMEE++A+ME+GVLTV VP  KA EK  +VKS++ISG
Sbjct: 121 LPENAKMEEVKATMENGVLTVVVP--KAPEKKPQVKSIDISG 159

[Close]

BLAST of CmoCh13G000920 vs. ExPASy Swiss-Prot
Match: P19243 (18.1 kDa class I heat shock protein OS=Pisum sativum OX=3888 GN=HSP18.1 PE=1 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 2.2e-50
Identity = 107/162 (66.05%), Postives = 129/162 (79.63%), Query Frame = 0


Query: 1   MSMIPSFFGGRRSSIFDPFATFDLLDPFDFHFPSSISSYFPEIARDTSDLMNAAVDWKET 60
           MS+IPSFF GRRS++FDPF + D+ DP    FP S SS      R+    ++  VDWKET
Sbjct: 1   MSLIPSFFSGRRSNVFDPF-SLDVWDPLK-DFPFSNSSPSASFPRENPAFVSTRVDWKET 60

Query: 61  PEAHVMKADLPGLKKDEVKVEIEEGKVLQISGRRSVEKEDINEKWHRIERSSGKFQTRFR 120
           PEAHV KADLPGLKK+EVKVE+E+ +VLQISG RSVEKED N++WHR+ERSSGKF  RFR
Sbjct: 61  PEAHVFKADLPGLKKEEVKVEVEDDRVLQISGERSVEKEDKNDEWHRVERSSGKFLRRFR 120

Query: 121 LPEDAKMEEIRASMEDGVLTVTVPKAKAEEKNAEVKSVEISG 163
           LPE+AKM++++ASME+GVLTVTVP  K E K AEVKS+EISG
Sbjct: 121 LPENAKMDKVKASMENGVLTVTVP--KEEIKKAEVKSIEISG 158

[Close]

BLAST of CmoCh13G000920 vs. ExPASy Swiss-Prot
Match: P04793 (17.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.5-M PE=3 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 4.9e-50
Identity = 103/163 (63.19%), Postives = 132/163 (80.98%), Query Frame = 0


Query: 1   MSMIPSFFGGRRSSIFDPFATFDLLDPF-DFHFPSSISSYFPEIARDTSDLMNAAVDWKE 60
           MS+IPS FGGRRS++FDPF + D+ DPF DFHFP+S+S+       + S  +N  VDWKE
Sbjct: 1   MSLIPSIFGGRRSNVFDPF-SLDVWDPFKDFHFPTSLSA-------ENSAFVNTRVDWKE 60

Query: 61  TPEAHVMKADLPGLKKDEVKVEIEEGKVLQISGRRSVEKEDINEKWHRIERSSGKFQTRF 120
           TPEAHV +AD+PGLKK+EVKV+IE+ +VLQISG R++EKED N+ WHR+ERSSG F  RF
Sbjct: 61  TPEAHVFEADIPGLKKEEVKVQIEDDRVLQISGERNLEKEDKNDTWHRVERSSGNFMRRF 120

Query: 121 RLPEDAKMEEIRASMEDGVLTVTVPKAKAEEKNAEVKSVEISG 163
           RLPE+AK+E+++ASME+GVLTVTVP  K E K  +VK++EISG
Sbjct: 121 RLPENAKVEQVKASMENGVLTVTVP--KEEVKKPDVKAIEISG 153

[Close]

BLAST of CmoCh13G000920 vs. ExPASy TrEMBL
Match: A0A6J1HIX6 (18.5 kDa class I heat shock protein-like OS=Cucurbita moschata OX=3662 GN=LOC111464865 PE=3 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 5.9e-83
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MSMIPSFFGGRRSSIFDPFATFDLLDPFDFHFPSSISSYFPEIARDTSDLMNAAVDWKET 60
           MSMIPSFFGGRRSSIFDPFATFDLLDPFDFHFPSSISSYFPEIARDTSDLMNAAVDWKET
Sbjct: 1   MSMIPSFFGGRRSSIFDPFATFDLLDPFDFHFPSSISSYFPEIARDTSDLMNAAVDWKET 60

Query: 61  PEAHVMKADLPGLKKDEVKVEIEEGKVLQISGRRSVEKEDINEKWHRIERSSGKFQTRFR 120
           PEAHVMKADLPGLKKDEVKVEIEEGKVLQISGRRSVEKEDINEKWHRIERSSGKFQTRFR
Sbjct: 61  PEAHVMKADLPGLKKDEVKVEIEEGKVLQISGRRSVEKEDINEKWHRIERSSGKFQTRFR 120

Query: 121 LPEDAKMEEIRASMEDGVLTVTVPKAKAEEKNAEVKSVEISG 163
           LPEDAKMEEIRASMEDGVLTVTVPKAKAEEKNAEVKSVEISG
Sbjct: 121 LPEDAKMEEIRASMEDGVLTVTVPKAKAEEKNAEVKSVEISG 162

[Close]

BLAST of CmoCh13G000920 vs. ExPASy TrEMBL
Match: H6TB43 (HSP18.2A OS=Citrullus lanatus OX=3654 PE=2 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 5.8e-70
Identity = 137/162 (84.57%), Postives = 152/162 (93.83%), Query Frame = 0


Query: 1   MSMIPSFFGGRRSSIFDPFATFDLLDPFDFHFPSSISSYFPEIARDTSDLMNAAVDWKET 60
           MSMIPSFFGGRRSS+FDPFATFDL DPFDFHFPSSISS+FPEIAR+TS ++NA VDWKET
Sbjct: 1   MSMIPSFFGGRRSSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAMVNARVDWKET 60

Query: 61  PEAHVMKADLPGLKKDEVKVEIEEGKVLQISGRRSVEKEDINEKWHRIERSSGKFQTRFR 120
           PEAHV+KADLPGLKK+EVKVE+E+GKV+QISG RS+EKED NEKWHRIERSSGKFQ RFR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEVEDGKVIQISGERSIEKEDKNEKWHRIERSSGKFQRRFR 120

Query: 121 LPEDAKMEEIRASMEDGVLTVTVPKAKAEEKNAEVKSVEISG 163
           LPEDAKMEEIRASME+GVLTVTVP  KAE+K  +VK+VEISG
Sbjct: 121 LPEDAKMEEIRASMENGVLTVTVP--KAEQKKTDVKTVEISG 160

[Close]

BLAST of CmoCh13G000920 vs. ExPASy TrEMBL
Match: A0A5D3BFY1 (18.5 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G001650 PE=3 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 7.5e-70
Identity = 138/162 (85.19%), Postives = 152/162 (93.83%), Query Frame = 0


Query: 1   MSMIPSFFGGRRSSIFDPFATFDLLDPFDFHFPSSISSYFPEIARDTSDLMNAAVDWKET 60
           MSMIPSFFGGRRSS+FDPFATFDL DPFDFHFPSSISS+FPEIAR+TS ++NA VDWKET
Sbjct: 1   MSMIPSFFGGRRSSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAIVNARVDWKET 60

Query: 61  PEAHVMKADLPGLKKDEVKVEIEEGKVLQISGRRSVEKEDINEKWHRIERSSGKFQTRFR 120
           PEAHV+KADLPGLKK+EVKVEIE+GKV+QISG RSVEKED NEKWHR+ERSSGKF+ RFR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERSVEKEDKNEKWHRMERSSGKFKRRFR 120

Query: 121 LPEDAKMEEIRASMEDGVLTVTVPKAKAEEKNAEVKSVEISG 163
           +PED KMEEIRASME+GVLTVTVP  KAEEK A+VKSVEISG
Sbjct: 121 MPEDVKMEEIRASMENGVLTVTVP--KAEEKKADVKSVEISG 160

[Close]

BLAST of CmoCh13G000920 vs. ExPASy TrEMBL
Match: A0A1S3C522 (18.5 kDa class I heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103497112 PE=3 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 7.5e-70
Identity = 138/162 (85.19%), Postives = 152/162 (93.83%), Query Frame = 0


Query: 1   MSMIPSFFGGRRSSIFDPFATFDLLDPFDFHFPSSISSYFPEIARDTSDLMNAAVDWKET 60
           MSMIPSFFGGRRSS+FDPFATFDL DPFDFHFPSSISS+FPEIAR+TS ++NA VDWKET
Sbjct: 1   MSMIPSFFGGRRSSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAIVNARVDWKET 60

Query: 61  PEAHVMKADLPGLKKDEVKVEIEEGKVLQISGRRSVEKEDINEKWHRIERSSGKFQTRFR 120
           PEAHV+KADLPGLKK+EVKVEIE+GKV+QISG RSVEKED NEKWHR+ERSSGKF+ RFR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERSVEKEDKNEKWHRMERSSGKFKRRFR 120

Query: 121 LPEDAKMEEIRASMEDGVLTVTVPKAKAEEKNAEVKSVEISG 163
           +PED KMEEIRASME+GVLTVTVP  KAEEK A+VKSVEISG
Sbjct: 121 MPEDVKMEEIRASMENGVLTVTVP--KAEEKKADVKSVEISG 160

[Close]

BLAST of CmoCh13G000920 vs. ExPASy TrEMBL
Match: A0A6J1HK86 (18.5 kDa class I heat shock protein-like OS=Cucurbita moschata OX=3662 GN=LOC111464867 PE=3 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 9.2e-68
Identity = 135/162 (83.33%), Postives = 150/162 (92.59%), Query Frame = 0


Query: 1   MSMIPSFFGGRRSSIFDPFATFDLLDPFDFHFPSSISSYFPEIARDTSDLMNAAVDWKET 60
           MSMIPSFFGG+RSSIFDPFATFDL DPFDFHFPSS+SS+FPEIAR+TS ++NA VDWKET
Sbjct: 1   MSMIPSFFGGQRSSIFDPFATFDLSDPFDFHFPSSLSSHFPEIARETSAMVNARVDWKET 60

Query: 61  PEAHVMKADLPGLKKDEVKVEIEEGKVLQISGRRSVEKEDINEKWHRIERSSGKFQTRFR 120
           PEAHV+KADLPGLKK+EVKVEIE+GKV+QISG R VEKE+ NEKWHR+ERSSG FQ RFR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERRVEKEEKNEKWHRMERSSGMFQRRFR 120

Query: 121 LPEDAKMEEIRASMEDGVLTVTVPKAKAEEKNAEVKSVEISG 163
           LPEDAKMEEIRASME+GVLTVTVP  KAEE+  +VKSVEISG
Sbjct: 121 LPEDAKMEEIRASMENGVLTVTVP--KAEERKMDVKSVEISG 160

[Close]

BLAST of CmoCh13G000920 vs. NCBI nr
Match: XP_022964897.1 (18.5 kDa class I heat shock protein-like [Cucurbita moschata] >KAG6583397.1 18.5 kDa class I heat shock protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 316.6 bits (810), Expect = 1.2e-82
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MSMIPSFFGGRRSSIFDPFATFDLLDPFDFHFPSSISSYFPEIARDTSDLMNAAVDWKET 60
           MSMIPSFFGGRRSSIFDPFATFDLLDPFDFHFPSSISSYFPEIARDTSDLMNAAVDWKET
Sbjct: 1   MSMIPSFFGGRRSSIFDPFATFDLLDPFDFHFPSSISSYFPEIARDTSDLMNAAVDWKET 60

Query: 61  PEAHVMKADLPGLKKDEVKVEIEEGKVLQISGRRSVEKEDINEKWHRIERSSGKFQTRFR 120
           PEAHVMKADLPGLKKDEVKVEIEEGKVLQISGRRSVEKEDINEKWHRIERSSGKFQTRFR
Sbjct: 61  PEAHVMKADLPGLKKDEVKVEIEEGKVLQISGRRSVEKEDINEKWHRIERSSGKFQTRFR 120

Query: 121 LPEDAKMEEIRASMEDGVLTVTVPKAKAEEKNAEVKSVEISG 163
           LPEDAKMEEIRASMEDGVLTVTVPKAKAEEKNAEVKSVEISG
Sbjct: 121 LPEDAKMEEIRASMEDGVLTVTVPKAKAEEKNAEVKSVEISG 162

[Close]

BLAST of CmoCh13G000920 vs. NCBI nr
Match: XP_023522284.1 (17.3 kDa class I heat shock protein-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 302.8 bits (774), Expect = 1.8e-78
Identity = 154/162 (95.06%), Postives = 158/162 (97.53%), Query Frame = 0


Query: 1   MSMIPSFFGGRRSSIFDPFATFDLLDPFDFHFPSSISSYFPEIARDTSDLMNAAVDWKET 60
           MSMIPSFFGGRRSSIFDPFATFDL DPFDFHFPSSISSY PEIARDTSDLMNA VDWKET
Sbjct: 1   MSMIPSFFGGRRSSIFDPFATFDLSDPFDFHFPSSISSYLPEIARDTSDLMNARVDWKET 60

Query: 61  PEAHVMKADLPGLKKDEVKVEIEEGKVLQISGRRSVEKEDINEKWHRIERSSGKFQTRFR 120
           PEAHVMKADLPGLKK+EVKVEIE+GKVLQISGRRSVEKEDINEKWHRIERSSGKFQ +FR
Sbjct: 61  PEAHVMKADLPGLKKEEVKVEIEDGKVLQISGRRSVEKEDINEKWHRIERSSGKFQRKFR 120

Query: 121 LPEDAKMEEIRASMEDGVLTVTVPKAKAEEKNAEVKSVEISG 163
           LPEDAKMEEIRASMEDGVLTVTVPKAKAEEKNA+VKSVEISG
Sbjct: 121 LPEDAKMEEIRASMEDGVLTVTVPKAKAEEKNADVKSVEISG 162

[Close]

BLAST of CmoCh13G000920 vs. NCBI nr
Match: XP_023519237.1 (17.3 kDa class I heat shock protein-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 300.4 bits (768), Expect = 9.1e-78
Identity = 153/162 (94.44%), Postives = 157/162 (96.91%), Query Frame = 0


Query: 1   MSMIPSFFGGRRSSIFDPFATFDLLDPFDFHFPSSISSYFPEIARDTSDLMNAAVDWKET 60
           MSMIPSFFGGRRSSIFDPFATFDL DPFDFHFPSSISSY PEIARDTSDLMNA VDWKET
Sbjct: 1   MSMIPSFFGGRRSSIFDPFATFDLSDPFDFHFPSSISSYLPEIARDTSDLMNARVDWKET 60

Query: 61  PEAHVMKADLPGLKKDEVKVEIEEGKVLQISGRRSVEKEDINEKWHRIERSSGKFQTRFR 120
           PEAHVMKADLPGLKK+EVKVEIE+GKVLQISGRRSVEKEDINEKWHRIERSSGKFQ +FR
Sbjct: 61  PEAHVMKADLPGLKKEEVKVEIEDGKVLQISGRRSVEKEDINEKWHRIERSSGKFQRKFR 120

Query: 121 LPEDAKMEEIRASMEDGVLTVTVPKAKAEEKNAEVKSVEISG 163
           LPEDAKMEEIRAS EDGVLTVTVPKAKAEEKNA+VKSVEISG
Sbjct: 121 LPEDAKMEEIRASREDGVLTVTVPKAKAEEKNADVKSVEISG 162

[Close]

BLAST of CmoCh13G000920 vs. NCBI nr
Match: ADU55790.1 (HSP18.2A [Citrullus lanatus])

HSP 1 Score: 273.5 bits (698), Expect = 1.2e-69
Identity = 137/162 (84.57%), Postives = 152/162 (93.83%), Query Frame = 0


Query: 1   MSMIPSFFGGRRSSIFDPFATFDLLDPFDFHFPSSISSYFPEIARDTSDLMNAAVDWKET 60
           MSMIPSFFGGRRSS+FDPFATFDL DPFDFHFPSSISS+FPEIAR+TS ++NA VDWKET
Sbjct: 1   MSMIPSFFGGRRSSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAMVNARVDWKET 60

Query: 61  PEAHVMKADLPGLKKDEVKVEIEEGKVLQISGRRSVEKEDINEKWHRIERSSGKFQTRFR 120
           PEAHV+KADLPGLKK+EVKVE+E+GKV+QISG RS+EKED NEKWHRIERSSGKFQ RFR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEVEDGKVIQISGERSIEKEDKNEKWHRIERSSGKFQRRFR 120

Query: 121 LPEDAKMEEIRASMEDGVLTVTVPKAKAEEKNAEVKSVEISG 163
           LPEDAKMEEIRASME+GVLTVTVP  KAE+K  +VK+VEISG
Sbjct: 121 LPEDAKMEEIRASMENGVLTVTVP--KAEQKKTDVKTVEISG 160

[Close]

BLAST of CmoCh13G000920 vs. NCBI nr
Match: XP_008457420.1 (PREDICTED: 18.5 kDa class I heat shock protein-like [Cucumis melo] >KAA0031777.1 18.5 kDa class I heat shock protein-like [Cucumis melo var. makuwa] >TYJ97355.1 18.5 kDa class I heat shock protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 273.1 bits (697), Expect = 1.6e-69
Identity = 138/162 (85.19%), Postives = 152/162 (93.83%), Query Frame = 0


Query: 1   MSMIPSFFGGRRSSIFDPFATFDLLDPFDFHFPSSISSYFPEIARDTSDLMNAAVDWKET 60
           MSMIPSFFGGRRSS+FDPFATFDL DPFDFHFPSSISS+FPEIAR+TS ++NA VDWKET
Sbjct: 1   MSMIPSFFGGRRSSVFDPFATFDLSDPFDFHFPSSISSHFPEIARETSAIVNARVDWKET 60

Query: 61  PEAHVMKADLPGLKKDEVKVEIEEGKVLQISGRRSVEKEDINEKWHRIERSSGKFQTRFR 120
           PEAHV+KADLPGLKK+EVKVEIE+GKV+QISG RSVEKED NEKWHR+ERSSGKF+ RFR
Sbjct: 61  PEAHVLKADLPGLKKEEVKVEIEDGKVIQISGERSVEKEDKNEKWHRMERSSGKFKRRFR 120

Query: 121 LPEDAKMEEIRASMEDGVLTVTVPKAKAEEKNAEVKSVEISG 163
           +PED KMEEIRASME+GVLTVTVP  KAEEK A+VKSVEISG
Sbjct: 121 MPEDVKMEEIRASMENGVLTVTVP--KAEEKKADVKSVEISG 160

[Close]

BLAST of CmoCh13G000920 vs. TAIR 10
Match: AT5G59720.1 (heat shock protein 18.2 )

HSP 1 Score: 201.1 bits (510), Expect = 7.0e-52
Identity = 105/162 (64.81%), Postives = 127/162 (78.40%), Query Frame = 0


Query: 1   MSMIPSFFGGRRSSIFDPFATFDLLDPFDFHFPSSISSYFPEIARDTSDLMNAAVDWKET 60
           MS+IPS FGGRRS++FDPF+  DL DPF+  F  S +      ARD +   NA VDWKET
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSQ-DLWDPFEGFFTPSSALANASTARDVAAFTNARVDWKET 60

Query: 61  PEAHVMKADLPGLKKDEVKVEIEEGKVLQISGRRSVEKEDINEKWHRIERSSGKFQTRFR 120
           PEAHV KADLPGLKK+EVKVE+E+  VLQISG RS E E+ N+KWHR+ER+SGKF  RFR
Sbjct: 61  PEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFR 120

Query: 121 LPEDAKMEEIRASMEDGVLTVTVPKAKAEEKNAEVKSVEISG 163
           LPE+AKMEE++A+ME+GVLTV VP  KA EK  +VKS++ISG
Sbjct: 121 LPENAKMEEVKATMENGVLTVVVP--KAPEKKPQVKSIDISG 159

[Close]

BLAST of CmoCh13G000920 vs. TAIR 10
Match: AT1G53540.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 196.4 bits (498), Expect = 1.7e-50
Identity = 104/163 (63.80%), Postives = 130/163 (79.75%), Query Frame = 0


Query: 1   MSMIPSFFGGRRSSIFDPFATFDLLDPFD-FHFPSSISSYFPEIARDTSDLMNAAVDWKE 60
           MS+IPS FGGRR+++FDPF + D+ DPF+ F  PS +++     A D +   NA VDW+E
Sbjct: 1   MSLIPSIFGGRRTNVFDPF-SLDVFDPFEGFLTPSGLAN---APAMDVAAFTNAKVDWRE 60

Query: 61  TPEAHVMKADLPGLKKDEVKVEIEEGKVLQISGRRSVEKEDINEKWHRIERSSGKFQTRF 120
           TPEAHV KADLPGL+K+EVKVE+E+G +LQISG RS E E+ N+KWHR+ERSSGKF  RF
Sbjct: 61  TPEAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRF 120

Query: 121 RLPEDAKMEEIRASMEDGVLTVTVPKAKAEEKNAEVKSVEISG 163
           RLPE+AKMEEI+ASME+GVL+VTVP  K  EK  EVKS++ISG
Sbjct: 121 RLPENAKMEEIKASMENGVLSVTVP--KVPEKKPEVKSIDISG 157

[Close]

BLAST of CmoCh13G000920 vs. TAIR 10
Match: AT3G46230.1 (heat shock protein 17.4 )

HSP 1 Score: 190.7 bits (483), Expect = 9.5e-49
Identity = 97/162 (59.88%), Postives = 128/162 (79.01%), Query Frame = 0


Query: 1   MSMIPSFFGGRRSSIFDPFATFDLLDPFDFHFPSSISSYFPEIARDTSDLMNAAVDWKET 60
           MS++PSFFGGRR+++FDPF + D+ DPF+      +++     A+D +   NA VDW+ET
Sbjct: 1   MSLVPSFFGGRRTNVFDPF-SLDVWDPFEGFLTPGLTN---APAKDVAAFTNAKVDWRET 60

Query: 61  PEAHVMKADLPGLKKDEVKVEIEEGKVLQISGRRSVEKEDINEKWHRIERSSGKFQTRFR 120
           PEAHV KAD+PGLKK+EVKVE+E+G +LQISG RS E E+ ++ WHR+ERSSGKF  RFR
Sbjct: 61  PEAHVFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFR 120

Query: 121 LPEDAKMEEIRASMEDGVLTVTVPKAKAEEKNAEVKSVEISG 163
           LPE+AK+EE++ASME+GVL+VTVP  K +E   EVKSV+ISG
Sbjct: 121 LPENAKVEEVKASMENGVLSVTVP--KVQESKPEVKSVDISG 156

[Close]

BLAST of CmoCh13G000920 vs. TAIR 10
Match: AT2G29500.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 189.9 bits (481), Expect = 1.6e-48
Identity = 105/163 (64.42%), Postives = 128/163 (78.53%), Query Frame = 0


Query: 1   MSMIPSFF-GGRRSSIFDPFATFDLLDPFDFHFPSSISSYFPEIARDTSDLMNAAVDWKE 60
           MSMIPSFF   RRS+IFDPF + D+ DPF     SS+S       R+ S ++NA VDW+E
Sbjct: 1   MSMIPSFFNNNRRSNIFDPF-SLDVWDPFKELTSSSLS-------RENSAIVNARVDWRE 60

Query: 61  TPEAHVMKADLPGLKKDEVKVEIEEGKVLQISGRRSVEKEDINEKWHRIERSSGKFQTRF 120
           TPEAHV KADLPGLKK+EVKVEIEE  VL+ISG R VEKED N+ WHR+ERSSG+F  RF
Sbjct: 61  TPEAHVFKADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRRF 120

Query: 121 RLPEDAKMEEIRASMEDGVLTVTVPKAKAEEKNAEVKSVEISG 163
           RLPE+ KM++++A+ME+GVLTVTVP  KAE K A+VKS++ISG
Sbjct: 121 RLPENVKMDQVKAAMENGVLTVTVP--KAETKKADVKSIQISG 153

[Close]

BLAST of CmoCh13G000920 vs. TAIR 10
Match: AT1G07400.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 186.0 bits (471), Expect = 2.3e-47
Identity = 99/165 (60.00%), Postives = 128/165 (77.58%), Query Frame = 0


Query: 1   MSMIPSFFGGRR--SSIFDPFATFDLLDPF-DFHFPSSISSYFPEIARDTSDLMNAAVDW 60
           MS+IPSFFG  R  +SIFDPF + D+ DPF +  FPSS+S        +TS + NA VDW
Sbjct: 1   MSLIPSFFGNNRRSNSIFDPF-SLDVWDPFKELQFPSSLSG-------ETSAITNARVDW 60

Query: 61  KETPEAHVMKADLPGLKKDEVKVEIEEGKVLQISGRRSVEKEDINEKWHRIERSSGKFQT 120
           KET EAHV KADLPG+KK+EVKVEIE+  VL+ISG R VEKE+  + WHR+ERSSG+F  
Sbjct: 61  KETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFSR 120

Query: 121 RFRLPEDAKMEEIRASMEDGVLTVTVPKAKAEEKNAEVKSVEISG 163
           +F+LPE+ KM++++ASME+GVLTVTVPK +  +K A+VKS++ISG
Sbjct: 121 KFKLPENVKMDQVKASMENGVLTVTVPKVEEAKKKAQVKSIDISG 157

The following BLAST results are available for this feature:

BLAST of CmoCh13G000920 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P05478	2.8e-53	65.85	18.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP18.5-C PE=3 SV=...	[more]
P27880	7.5e-51	65.85	18.2 kDa class I heat shock protein OS=Medicago sativa OX=3879 GN=HSP18.2 PE=2 S...	[more]
P19037	9.9e-51	64.81	18.1 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP18.1 P...	[more]
P19243	2.2e-50	66.05	18.1 kDa class I heat shock protein OS=Pisum sativum OX=3888 GN=HSP18.1 PE=1 SV=...	[more]
P04793	4.9e-50	63.19	17.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.5-M PE=3 SV=...	[more]

BLAST of CmoCh13G000920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HIX6	5.9e-83	100.00	18.5 kDa class I heat shock protein-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
H6TB43	5.8e-70	84.57	HSP18.2A OS=Citrullus lanatus OX=3654 PE=2 SV=1	[more]
A0A5D3BFY1	7.5e-70	85.19	18.5 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3C522	7.5e-70	85.19	18.5 kDa class I heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103497112...	[more]
A0A6J1HK86	9.2e-68	83.33	18.5 kDa class I heat shock protein-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]

BLAST of CmoCh13G000920 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022964897.1	1.2e-82	100.00	18.5 kDa class I heat shock protein-like [Cucurbita moschata] >KAG6583397.1 18.5...	[more]
XP_023522284.1	1.8e-78	95.06	17.3 kDa class I heat shock protein-like [Cucurbita pepo subsp. pepo]	[more]
XP_023519237.1	9.1e-78	94.44	17.3 kDa class I heat shock protein-like [Cucurbita pepo subsp. pepo]	[more]
ADU55790.1	1.2e-69	84.57	HSP18.2A [Citrullus lanatus]	[more]
XP_008457420.1	1.6e-69	85.19	PREDICTED: 18.5 kDa class I heat shock protein-like [Cucumis melo] >KAA0031777.1...	[more]

BLAST of CmoCh13G000920 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59720.1	7.0e-52	64.81	heat shock protein 18.2	[more]
AT1G53540.1	1.7e-50	63.80	HSP20-like chaperones superfamily protein	[more]
AT3G46230.1	9.5e-49	59.88	heat shock protein 17.4	[more]
AT2G29500.1	1.6e-48	64.42	HSP20-like chaperones superfamily protein	[more]
AT1G07400.1	2.3e-47	60.00	HSP20-like chaperones superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 10..162 e-value: 4.7E-45 score: 154.9
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 22..152
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 56..161 e-value: 8.6E-29 score: 99.7
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 46..161 score: 29.698032
None	No IPR available	PANTHER	PTHR11527:SF325	17.8 KDA CLASS I HEAT SHOCK PROTEIN-LIKE	coord: 1..162
None	No IPR available	CDD	cd06472	ACD_ScHsp26_like	coord: 55..145 e-value: 5.20118E-50 score: 154.0
IPR031107	Small heat shock protein HSP20	PANTHER	PTHR11527	HEAT-SHOCK PROTEIN 20 FAMILY MEMBER	coord: 1..162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh13G000920.1	CmoCh13G000920.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051259	protein complex oligomerization
biological_process	GO:0006457	protein folding
biological_process	GO:0009408	response to heat
biological_process	GO:0042542	response to hydrogen peroxide
biological_process	GO:0009651	response to salt stress
molecular_function	GO:0043621	protein self-association
molecular_function	GO:0051082	unfolded protein binding