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CmoCh13G000080 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGTCCGCTGAGATTTATTCTCATATTTCTCTCAGCGACTCTTGCCGGCTTCTTTGTTCTCCGGAACCTCAAATCTCAGCCGCAAGATTTCGAGGCCGACGATAATTCCGAGACCCACTCCAACGATGTGTCTACCAATTCGGCCTCCTCGTCCTCCTTCTCCAAGGTTCTTGTCATTCTTTTATACCGGAATCTCGCATTTCCTTCTTGTTTCTTTGTTTGTGTCTGAACGGAAGGATTGTGGTTTGTTTGAACAGGTGTCCTCGGCAATGCAATCGGGATTCTGGACGGTGGTCGACATGGCCAGCGGCCGCTACTTGTGGAGGCATTTGTTGCCCTCGTCGAAGAAGCCTTCCAATTGA ATGTGTCCGCTGAGATTTATTCTCATATTTCTCTCAGCGACTCTTGCCGGCTTCTTTGTTCTCCGGAACCTCAAATCTCAGCCGCAAGATTTCGAGGCCGACGATAATTCCGAGACCCACTCCAACGATGTGTCTACCAATTCGGCCTCCTCGTCCTCCTTCTCCAAGGTTCTTGTGTCCTCGGCAATGCAATCGGGATTCTGGACGGTGGTCGACATGGCCAGCGGCCGCTACTTGTGGAGGCATTTGTTGCCCTCGTCGAAGAAGCCTTCCAATTGA ATGTGTCCGCTGAGATTTATTCTCATATTTCTCTCAGCGACTCTTGCCGGCTTCTTTGTTCTCCGGAACCTCAAATCTCAGCCGCAAGATTTCGAGGCCGACGATAATTCCGAGACCCACTCCAACGATGTGTCTACCAATTCGGCCTCCTCGTCCTCCTTCTCCAAGGTTCTTGTGTCCTCGGCAATGCAATCGGGATTCTGGACGGTGGTCGACATGGCCAGCGGCCGCTACTTGTGGAGGCATTTGTTGCCCTCGTCGAAGAAGCCTTCCAATTGA MCPLRFILIFLSATLAGFFVLRNLKSQPQDFEADDNSETHSNDVSTNSASSSSFSKVLVSSAMQSGFWTVVDMASGRYLWRHLLPSSKKPSN Homology
BLAST of CmoCh13G000080 vs. ExPASy TrEMBL
Match: A0A6J1KER9 (uncharacterized protein LOC111492605 OS=Cucurbita maxima OX=3661 GN=LOC111492605 PE=4 SV=1) HSP 1 Score: 142.1 bits (357), Expect = 1.1e-30 Identity = 74/92 (80.43%), Postives = 81/92 (88.04%), Query Frame = 0
BLAST of CmoCh13G000080 vs. ExPASy TrEMBL
Match: A0A6J1GAZ0 (uncharacterized protein LOC111452533 OS=Cucurbita moschata OX=3662 GN=LOC111452533 PE=4 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 1.3e-29 Identity = 72/92 (78.26%), Postives = 81/92 (88.04%), Query Frame = 0
BLAST of CmoCh13G000080 vs. ExPASy TrEMBL
Match: A0A0A0LV42 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025180 PE=4 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 1.1e-25 Identity = 69/92 (75.00%), Postives = 76/92 (82.61%), Query Frame = 0
BLAST of CmoCh13G000080 vs. ExPASy TrEMBL
Match: A0A6J1DPZ0 (uncharacterized protein LOC111022014 OS=Momordica charantia OX=3673 GN=LOC111022014 PE=4 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 1.4e-25 Identity = 71/91 (78.02%), Postives = 75/91 (82.42%), Query Frame = 0
BLAST of CmoCh13G000080 vs. ExPASy TrEMBL
Match: A0A1S3BWD8 (uncharacterized protein LOC103494193 OS=Cucumis melo OX=3656 GN=LOC103494193 PE=4 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 5.5e-25 Identity = 68/92 (73.91%), Postives = 75/92 (81.52%), Query Frame = 0
BLAST of CmoCh13G000080 vs. NCBI nr
Match: KAG7019097.1 (hypothetical protein SDJN02_18055, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 169.1 bits (427), Expect = 1.8e-38 Identity = 89/92 (96.74%), Postives = 90/92 (97.83%), Query Frame = 0
BLAST of CmoCh13G000080 vs. NCBI nr
Match: KAG6583321.1 (hypothetical protein SDJN03_19253, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 167.9 bits (424), Expect = 4.0e-38 Identity = 88/92 (95.65%), Postives = 90/92 (97.83%), Query Frame = 0
BLAST of CmoCh13G000080 vs. NCBI nr
Match: XP_023519406.1 (uncharacterized protein LOC111782825 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 162.5 bits (410), Expect = 1.7e-36 Identity = 88/96 (91.67%), Postives = 90/96 (93.75%), Query Frame = 0
BLAST of CmoCh13G000080 vs. NCBI nr
Match: XP_023525661.1 (uncharacterized protein LOC111789199 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 143.7 bits (361), Expect = 8.1e-31 Identity = 75/92 (81.52%), Postives = 81/92 (88.04%), Query Frame = 0
BLAST of CmoCh13G000080 vs. NCBI nr
Match: XP_022997733.1 (uncharacterized protein LOC111492605 [Cucurbita maxima]) HSP 1 Score: 142.1 bits (357), Expect = 2.4e-30 Identity = 74/92 (80.43%), Postives = 81/92 (88.04%), Query Frame = 0
BLAST of CmoCh13G000080 vs. TAIR 10
Match: AT5G58375.1 (Methyltransferase-related protein ) HSP 1 Score: 83.2 bits (204), Expect = 1.2e-16 Identity = 52/92 (56.52%), Postives = 62/92 (67.39%), Query Frame = 0
BLAST of CmoCh13G000080 vs. TAIR 10
Match: AT5G18150.1 (Methyltransferase-related protein ) HSP 1 Score: 65.5 bits (158), Expect = 2.6e-11 Identity = 34/89 (38.20%), Postives = 50/89 (56.18%), Query Frame = 0
BLAST of CmoCh13G000080 vs. TAIR 10
Match: AT5G14602.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: Methyltransferase-related protein (TAIR:AT5G18150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 59.3 bits (142), Expect = 1.9e-09 Identity = 35/83 (42.17%), Postives = 48/83 (57.83%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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