CmoCh12G013440 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh12G013440
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
LocationCmo_Chr12: 11632786 .. 11636981 (-)
RNA-Seq ExpressionCmoCh12G013440
SyntenyCmoCh12G013440
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGATCGTGACTTGGGAACGACTCGACGAAGCTCTCCTTCAAGAGTAACGATACCTAACAGAAAAAACAAAACAATTAGAGCTATTAGTCAACCTTGTAAGCAACCACACTTCGAAAATGATTACGAGCCAACCTTGTCATCGTTCGATTGTACATTAGTAATTGTATGTGAACGGAGGTTAGAGCAGAGAGAGTCCAAGTACAATCTTAGCACTTTGAGGAAACCCTTAGCAGCTTCAACCTATAAGCACAATAAACACAAAACTTTTCAAAACAGATGATTGGGAATACCAATTAAGAAGAAGGAAGAAAGAAAAAACCTGGACATCAGTGCATTCATGCACAGGCCTCTTTCTTCCTAAATAACTCTCTCCAACTAGCTCTGCATGATATCGTCTTAACGATGCGAATAACTCCTTTTGTTTTGGCAGCTCTGGTATTGTCGGGGCCTTCACCTATCATGTTCAATATGTTAGGATCGCATGACAACGCACACACTTGATCAAGATGAACACAAAGAATAGGAGAGAAAATTTAAGGAGGAATATTGGCTAAAAGTTTTATTGATGACTTCAAGTATGTACACTTAAGAGACAATATTGGCTAAAAGTTTTAATCTACGAAATATAATCTACCAAATATATCTCTACCATGTCCTTTACTATAAATAGGCATCAAGCTTCATATCCCAACACAATATACCTTAATTAATGCAAAATTAAATTGTATGAACATCAAAATTCTACCTGGTTTTTGTTCACATCAACCAAAATTGCATTGGTTAACTTTGACTGTACTTCACTGGTTCTACTCTTCACACCAACCTACTTACTTGGAAGTTCTCGTAAGTAATCAATTAGAAACGTTACAAGAAATAGCTGCAAATAAAATACTTACAATGTAAGGAACAGGGGCATCCAAAAAGTCCAGCATGTCATTTGGTAACACCTGAATGTTTATGTTTATGAACAAACACAAATATCCTCCAAAACAAGACATAACTATCAGAGATCAGAAATCATACTGGCATCAGCAAGCTTTGCCATTGGTAGGGACGAATCATAGGGATAATCGATAAAACTGAAGCCGATAGGATGCCCTGCAGGTTGTATACGAAATACTTAACAAACGAGACGTCCAATCAACAGCCAAACATGGTGTAAGAAGAATCATGTACCAAATTAGAACAGACAATCACAATCTGCTTCTCCAGCAGTGCTCCAGCTAAAATGGATAAGATCTGTGGAAAAACAAATCAATTGAGTTTCAAAAGGTTTAGTTCTAAGGTGGGCATATACTTACATGGTCTAGGCGTAAAGAACCACAAATGCTTGCAACAGTCCATATTGACAAGGCATTTGCTTCCTCCTCTACCATGAGAGCACCTTGTGCCTGAGACATCAACAAGATGTATGCTAAATTGAGGAATCAAAAGCTAATCCTAAATATTATTACTAAGATTACCTCAGCTAATTCAAGACTTGTACTACATGATCTTGGATCAATGGTTGAGCCAGCAACATGCAGAACTGTTTCACCTGATCTATGATATTCCATGGCATGCAGGTGCTCCAAAGGATGAAACTTAACAGAACATCCCCTACCAGGGTAATGCAACTCGTAATACTCGCATATGATTTGTAACGATCCTTTCTTGTTTTTCTGTAAATACGGAAAAAAAAAATTGAAGATAATAGCAAGAGAGCGACATACAAAAGCACAATTGTGAAATCTACAGAACCTTGGCCCTTTCAAGAATATCAAGTAGGTCAGTGGAATCATCCTGGCCGGAGAAAGATGCTTCCTCTGTCTCTGTGTCATCAGCATCACTCCTGAAGTTTCTGTCTTCACTTGGAGACCCCTGAAAACTACAAAATACAAATTCAAAGTTCAAAATGAGTCTACAATCAGTGATTAGTACACACACAAGTAAATAACTAGTTTACAATCATATACCTCGAGGACGATTCAGAGCTTTCGTATTGATAATAACGGAGGAGAGGTAGAACAGCATTTGGTAAACGCCTATCAGTTGCCTGCTTGTTTCTTGTAAAATCATCAACATTGACATCACGAGTTTCCTTATGAACAACATCGATATCCTCACTAATGCCCCTTGATATTTGATGATCAAGATGATTTTCATCTCCCATCGTTCTTTGTGAATCTTCCTCTTTTCCCTCAGACATGTCTTCAGCTGCATTCTGATCCAAGGTCATGCAACCTATGTCTTCTACCAAATCTTCTTCAATGCTCAAATTCTCTGTGGATTCCAAATTCAAAACACCAATACCTTTTGTTAATCTTTCCAGCCTTTCTTCAGTGAGGATGCTACAGGAAAGTTCATAAAAATGAAAGGTTAGAAAATTGAGATAAAAAAGTAATATGAGGAAATAGGATTCCAAATTAATATGTTTACATGTATACCTATTCAACACACCAAAATGTAATTCGAAGAATGGTAAGCGAGATAGGATGCAATAGCATCTGCGTGTGGTTAGTACGTAACGACTCAAGGATGAGTAGGATAGTGCTTTTTCAGAAACAGAGAGCAACCCAGATGGTTTCTGCACTAATTCTTCAACTAAAACACAGCATCCATACAATGTCGAATCATCAGCAACCTGCAAAAGCATAGTTAGCAACTGAGTGCAAATTGTGGCCTGTACTTTAGGGGTCCTAAATTCATTCTAGTACCTGTAAGCGGAATACAAATGAGAGGTCACTTTGTTTGAAGTGTTCCTGCAAATTTAACATACCGATTGAGTCCAAGTTACAAATACATCGAAGATTTTCTTAGATTTAGATCTTATTCGAACACTAGAGGACTAATGGTATTACCAGTCATTGAAACAAGGCAGTGTTCTTAAAGTATCCTAAAAACTAAGTTCCAATGCGTTTTCCAAAAAGAATACCTGCCCGAGAAGAATCTCGTTCAACTTGCTCATGGAAGGAGTTTTTTCAACAGCGTGAACCTGTAGTCACATAATCAAATCTCAGAAAAGAAAGACAGTGATCCAAGACTCTAAAGAAGCATTAATGTACCAGAGAGTAAGTAATGGTGAACAAAACATTCTTTATAAGGGTGTGGAAACCTCTATCTAGTAGATGCATTTTAAAAACCTTGAGAAAAATCCCAGAGAGGATAATATCTGCTAGCGGTGGGTTTGGGCCGTTACAAATGATATCAGAGCCAGATACTGGACAATGTGCCAGCAAGGAGCCTGAGCCCTTACGGGAGGTGGACACGAGGCAATGTGCCAGCAAGGACGCTGGGCTCCGAAGGGGGGTGGATTGTGAGATCCCACATCGGTTGGGGAGGAGAACGAAACATTATTTATAAAGGGTGTGAAAACCGCTCCCTAGTAGATGCGTTTCGAAAACCATGAAGGGAAGACAACATTTGCTAGAATGTGCCATAATATCCCATTGTCCTAAAAAGAATGTGCCTAATATATGAGAAAAGTCGGAATGAACAACCAACCTCCACACCTCCTGGAAAGCAGAATGAAAGAAGGTCCTTGTCTTTGAGCGGCAACTGCTTCTCTGGAGGGTACACAAATAGGACCTGACATGAACTCACAATTAATAATTCAAGAGCCTATTGATTTGAAGGACTAAGTTCGATTGAGAATGAGAATAAAACCCACCTGTGGTTCAATATGAGCTTCGGACTTCCTTGCAACATATTGCTCCTGAAGTGCCTGAATATCACAATTAGGATGAAGGCCAACAACAACCATGCTCTCAAATATCCTACTTGGCTCCTTCTGAGATCGATGGTCCTAAAATTTTGCACACAAACAAGTTCCAGTATATAAACAATGACAAACAATCAAAATTGAGTAGAATGAAAAGGCTAACCAAGTAGTGCAACTGAAAGTTCGCCCACTGACGCTTTTGGGTTGTGAGAAGTTCAGGATTATAGGTTCCTGGAGTTTTGAGTTGAGGAGGACTTGAAAAGCCTTGAAGCACTTTATTAACTTGACGCTGCAGTCTCTGTAGTGGACTGCCGCCCTCATCGGTTGCAACATCTTCGGTCGTCTGCAGGAAAAGTGAAGCGCCCCAACCAGGGCTCCCCGTCGCTTCCTTCTTATCCATCACTGAAACCCAAATATGCAACAATCACAGGGCTCTGCACAACACCGATCGGGTTATTTTAGTTAAGAAAGCAAAGCTTTTGTTGATGTAA

mRNA sequence

ATGGCCGATCGTGACTTGGGAACGACTCGACGAAGCTCTCCTTCAAGAGTAACGATACCTAACAGAAAAAACAAAACAATTAGAGCTATTAGTCAACCTTGTAAGCAACCACACTTCGAAAATGATTACGAGCCAACCTTGTCATCGTTCGATTGTACATTAGTAATTGTATGTGAACGGAGAACCTTGGCCCTTTCAAGAATATCAAGTAGGTCAGTGGAATCATCCTGGCCGGAGAAAGATGCTTCCTCTGTCTCTGTGTCATCAGCATCACTCCTGAATCTCTGTAGTGGACTGCCGCCCTCATCGGTTGCAACATCTTCGGTCGTCTGCAGGAAAAGTGAAGCGCCCCAACCAGGGCTCCCCGTCGCTTCCTTCTTATCCATCACTGAAACCCAAATATGCAACAATCACAGGGCTCTGCACAACACCGATCGGGTTATTTTAGTTAAGAAAGCAAAGCTTTTGTTGATGTAA

Coding sequence (CDS)

ATGGCCGATCGTGACTTGGGAACGACTCGACGAAGCTCTCCTTCAAGAGTAACGATACCTAACAGAAAAAACAAAACAATTAGAGCTATTAGTCAACCTTGTAAGCAACCACACTTCGAAAATGATTACGAGCCAACCTTGTCATCGTTCGATTGTACATTAGTAATTGTATGTGAACGGAGAACCTTGGCCCTTTCAAGAATATCAAGTAGGTCAGTGGAATCATCCTGGCCGGAGAAAGATGCTTCCTCTGTCTCTGTGTCATCAGCATCACTCCTGAATCTCTGTAGTGGACTGCCGCCCTCATCGGTTGCAACATCTTCGGTCGTCTGCAGGAAAAGTGAAGCGCCCCAACCAGGGCTCCCCGTCGCTTCCTTCTTATCCATCACTGAAACCCAAATATGCAACAATCACAGGGCTCTGCACAACACCGATCGGGTTATTTTAGTTAAGAAAGCAAAGCTTTTGTTGATGTAA

Protein sequence

MADRDLGTTRRSSPSRVTIPNRKNKTIRAISQPCKQPHFENDYEPTLSSFDCTLVIVCERRTLALSRISSRSVESSWPEKDASSVSVSSASLLNLCSGLPPSSVATSSVVCRKSEAPQPGLPVASFLSITETQICNNHRALHNTDRVILVKKAKLLLM
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh12G013440.1CmoCh12G013440.1mRNA