CmoCh12G013390 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh12G013390
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Mitochondrial ATP synthase subunit G protein
Location	Cmo_Chr12: 11622393 .. 11623686 (-)
RNA-Seq Expression	CmoCh12G013390
Synteny	CmoCh12G013390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTCCAAGTTGCATCAGTTGCAATCCAAGGCTTGTAAAGCTTCTCAATTTGCTATCAAGCACGGGTCCTCCTATTACAAGCAGTTGTTGGAGCAGAACAAGCAATACATCCAAGAACCAGCTACTGTGGAGAAATGCAGCTTGCTTTCAGAGCAGTTGTTTTATACTCGTCTTGCTAGGTTATTACCTTCAATACTCATGCTATTCTTGCACCTTTTCCTTGGTTGTTGAAGAATTCCTACCGTTTTCGTGTTCATGTGTTCTTGGGATCATACCTATTAGCTTAGTTTTAGTATCTTACTGGCATTCAACTGATACAATTGTGTTTTAGAAACTCGTCTGTTTCTATATTGATTTCAACTTTGCTTCTAAGCATCGCACCACTTGTTGAACTGCGCAGCCACTCGTGAGAATTATAGTTCATGGACCTGTTTCCATTCATGGAACAGTATACATATTTGTTATTCGTGGGAATGAATCCCCTCTCACCTGTAGCACTGTGCTTAGTATGATAGCATTTTTTTATTCCTAAAATGGGAGCACGAAAGTATCTACTATCGGTGCATGAATTCTGTATTATCCCCCACTCGATGTTCATATCCTAAAATACTTGTCCTAAGCTTCACTTCATTGCTTTACTCACTGATTTTGCACATTATGTTTATAATGCAGCATCCCAGGCCGATATGAATCATTCTGGAAAGAACTTGATTGTGTTAAAAACTTGTGGAAGAACCGGCAGGAGCTGAAAGTTGAAGATGCTGGCATCGCGGCCTTGTTCGGGCTTGAGTGTTTTGCATGGTTTTGTGCTGGTGAGATCGTTGGAAGGGGCTTTACATTCACAGGTTATTATGTCTGAGGACATTCATAGTCATTTGTGGAAGGGATGTCGACAATGGCGAATTCCCTTCTCTTTTCTGCGGGTACTTCGCATATAATTTTTTTCTTTTTCTTTTTAATTAAGTTGAGAATTCTGCGAGCAACTCTGATAGATTAATAATAGCCCATGAATTCCGAGGGGGACTATAAAGGATTCTTGCGTTGTTCAAATTGATGCATGTTCTTGATAAATCCAGTTACTAACTATGAACTGGAAATCTGATTTGGTGAAACCTCCATACAAGATGTGGCTTTTGCTGCAACTTCCCTACATTTTTCTTGGAGCTTTTTCCCAGATGATGTGCCAGGTTGTACGTAGAACTAGAGGTATGTCATTGTGCAATCTTTGTATTTGGGTGTTCCATTCGAAATCTTCAATATCAAGTTCATCTCTCCCATGTGAAAGTTTTTT

mRNA sequence

ATGGCGTCCAAGTTGCATCAGTTGCAATCCAAGGCTTGTAAAGCTTCTCAATTTGCTATCAAGCACGGGTCCTCCTATTACAAGCAGTTGTTGGAGCAGAACAAGCAATACATCCAAGAACCAGCTACTGTGGAGAAATGCAGCTTGCTTTCAGAGCAGTTGTTTTATACTCGTCTTGCTAGCATCCCAGGCCGATATGAATCATTCTGGAAAGAACTTGATTGTGTTAAAAACTTGTGGAAGAACCGGCAGGAGCTGAAAGTTGAAGATGCTGGCATCGCGGCCTTGTTCGGGCTTGAGTGTTTTGCATGGTTTTGTGCTGGTGAGATCGTTGGAAGGGGCTTTACATTCACAGGTTATTATGTCTGAGGACATTCATAGTCATTTGTGGAAGGGATGTCGACAATGGCGAATTCCCTTCTCTTTTCTGCGGGTACTTCGCATATAATTTTTTTCTTTTTCTTTTTAATTAAGTTGAGAATTCTGCGAGCAACTCTGATAGATTAATAATAGCCCATGAATTCCGAGGGGGACTATAAAGGATTCTTGCGTTGTTCAAATTGATGCATGTTCTTGATAAATCCAGTTACTAACTATGAACTGGAAATCTGATTTGGTGAAACCTCCATACAAGATGTGGCTTTTGCTGCAACTTCCCTACATTTTTCTTGGAGCTTTTTCCCAGATGATGTGCCAGGTTGTACGTAGAACTAGAGGTATGTCATTGTGCAATCTTTGTATTTGGGTGTTCCATTCGAAATCTTCAATATCAAGTTCATCTCTCCCATGTGAAAGTTTTTT

Coding sequence (CDS)

ATGGCGTCCAAGTTGCATCAGTTGCAATCCAAGGCTTGTAAAGCTTCTCAATTTGCTATCAAGCACGGGTCCTCCTATTACAAGCAGTTGTTGGAGCAGAACAAGCAATACATCCAAGAACCAGCTACTGTGGAGAAATGCAGCTTGCTTTCAGAGCAGTTGTTTTATACTCGTCTTGCTAGCATCCCAGGCCGATATGAATCATTCTGGAAAGAACTTGATTGTGTTAAAAACTTGTGGAAGAACCGGCAGGAGCTGAAAGTTGAAGATGCTGGCATCGCGGCCTTGTTCGGGCTTGAGTGTTTTGCATGGTTTTGTGCTGGTGAGATCGTTGGAAGGGGCTTTACATTCACAGGTTATTATGTCTGA

Protein sequence

MASKLHQLQSKACKASQFAIKHGSSYYKQLLEQNKQYIQEPATVEKCSLLSEQLFYTRLASIPGRYESFWKELDCVKNLWKNRQELKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGYYV

Homology

[Close]

BLAST of CmoCh12G013390 vs. ExPASy TrEMBL
Match: A0A6J1FIQ4 (uncharacterized protein LOC111444283 OS=Cucurbita moschata OX=3662 GN=LOC111444283 PE=3 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 1.4e-63
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0


Query: 1   MASKLHQLQSKACKASQFAIKHGSSYYKQLLEQNKQYIQEPATVEKCSLLSEQLFYTRLA 60
           MASKLHQLQSKACKASQFAIKHGSSYYKQLLEQNKQYIQEPATVEKCSLLSEQLFYTRLA
Sbjct: 1   MASKLHQLQSKACKASQFAIKHGSSYYKQLLEQNKQYIQEPATVEKCSLLSEQLFYTRLA 60

Query: 61  SIPGRYESFWKELDCVKNLWKNRQELKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120
           SIPGRYESFWKELDCVKNLWKNRQELKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY
Sbjct: 61  SIPGRYESFWKELDCVKNLWKNRQELKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120

Query: 121 YV 123
           YV
Sbjct: 121 YV 122

[Close]

BLAST of CmoCh12G013390 vs. ExPASy TrEMBL
Match: A0A6J1HQQ0 (uncharacterized protein LOC111465772 OS=Cucurbita maxima OX=3661 GN=LOC111465772 PE=3 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 9.7e-62
Identity = 118/122 (96.72%), Postives = 121/122 (99.18%), Query Frame = 0


Query: 1   MASKLHQLQSKACKASQFAIKHGSSYYKQLLEQNKQYIQEPATVEKCSLLSEQLFYTRLA 60
           MASKLHQLQSKAC+AS+FAIKHGSSYYKQLLEQNKQYIQEPATVEKCSLLS QLFYTRLA
Sbjct: 1   MASKLHQLQSKACQASRFAIKHGSSYYKQLLEQNKQYIQEPATVEKCSLLSNQLFYTRLA 60

Query: 61  SIPGRYESFWKELDCVKNLWKNRQELKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120
           SIPGRYESFWKELDCVKNLWKNRQELKV+DAGIAALFGLECFAWFCAGEIVGRGFTFTGY
Sbjct: 61  SIPGRYESFWKELDCVKNLWKNRQELKVDDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120

Query: 121 YV 123
           YV
Sbjct: 121 YV 122

[Close]

BLAST of CmoCh12G013390 vs. ExPASy TrEMBL
Match: A0A6J1KB56 (uncharacterized protein LOC111493874 OS=Cucurbita maxima OX=3661 GN=LOC111493874 PE=3 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 7.0e-60
Identity = 116/122 (95.08%), Postives = 119/122 (97.54%), Query Frame = 0


Query: 1   MASKLHQLQSKACKASQFAIKHGSSYYKQLLEQNKQYIQEPATVEKCSLLSEQLFYTRLA 60
           MASKLHQLQSKAC+ASQFA KHGSSYYKQLLEQNKQYIQEPAT+EKCSLLS+QL YTRLA
Sbjct: 1   MASKLHQLQSKACQASQFAFKHGSSYYKQLLEQNKQYIQEPATLEKCSLLSKQLLYTRLA 60

Query: 61  SIPGRYESFWKELDCVKNLWKNRQELKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120
           SIPGRYESFWKELD VKNLWKNRQELKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY
Sbjct: 61  SIPGRYESFWKELDYVKNLWKNRQELKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120

Query: 121 YV 123
           YV
Sbjct: 121 YV 122

[Close]

BLAST of CmoCh12G013390 vs. ExPASy TrEMBL
Match: A0A0A0LIN6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G000550 PE=3 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 9.1e-60
Identity = 116/122 (95.08%), Postives = 119/122 (97.54%), Query Frame = 0


Query: 1   MASKLHQLQSKACKASQFAIKHGSSYYKQLLEQNKQYIQEPATVEKCSLLSEQLFYTRLA 60
           MASKLHQLQSKAC+A+QFA KHGSSYYKQLLEQNKQYIQEPATVEKCSLLS+QL YTRLA
Sbjct: 1   MASKLHQLQSKACQATQFACKHGSSYYKQLLEQNKQYIQEPATVEKCSLLSKQLLYTRLA 60

Query: 61  SIPGRYESFWKELDCVKNLWKNRQELKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120
           SIPGRYESFWKELD VKNLWKNRQELKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY
Sbjct: 61  SIPGRYESFWKELDYVKNLWKNRQELKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120

Query: 121 YV 123
           YV
Sbjct: 121 YV 122

[Close]

BLAST of CmoCh12G013390 vs. ExPASy TrEMBL
Match: A0A6J1G3V3 (uncharacterized protein LOC111450519 OS=Cucurbita moschata OX=3662 GN=LOC111450519 PE=3 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 2.0e-59
Identity = 116/122 (95.08%), Postives = 117/122 (95.90%), Query Frame = 0


Query: 1   MASKLHQLQSKACKASQFAIKHGSSYYKQLLEQNKQYIQEPATVEKCSLLSEQLFYTRLA 60
           MASKLHQLQSKAC+ASQFA KHGSSYYKQLLEQNKQYIQEPATVEKCSLLS QL YTRLA
Sbjct: 1   MASKLHQLQSKACQASQFAFKHGSSYYKQLLEQNKQYIQEPATVEKCSLLSNQLLYTRLA 60

Query: 61  SIPGRYESFWKELDCVKNLWKNRQELKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120
           SIPGRYESFWKELD VKNLWKNRQELKVEDAGIAALFGLECFAWFCAGEIVGRGFT TGY
Sbjct: 61  SIPGRYESFWKELDYVKNLWKNRQELKVEDAGIAALFGLECFAWFCAGEIVGRGFTITGY 120

Query: 121 YV 123
           YV
Sbjct: 121 YV 122

[Close]

BLAST of CmoCh12G013390 vs. TAIR 10
Match: AT4G29480.1 (Mitochondrial ATP synthase subunit G protein )

HSP 1 Score: 211.1 bits (536), Expect = 5.1e-55
Identity = 100/121 (82.64%), Postives = 110/121 (90.91%), Query Frame = 0


Query: 1   MASKLHQLQSKACKASQFAIKHGSSYYKQLLEQNKQYIQEPATVEKCSLLSEQLFYTRLA 60
           MASKL Q+QSKAC+AS+F  KHG+SYY+QLLE+NKQYIQEPATVEKC  LS+QL YTRLA
Sbjct: 1   MASKLIQVQSKACEASKFVAKHGTSYYRQLLEKNKQYIQEPATVEKCQELSKQLLYTRLA 60

Query: 61  SIPGRYESFWKELDCVKNLWKNRQELKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120
           SIPGRYE+FWKE+D  KNLWKNR  LKVEDAGIAALFGLECFAW+CAGEI GRGFTFTGY
Sbjct: 61  SIPGRYETFWKEVDYAKNLWKNRSGLKVEDAGIAALFGLECFAWYCAGEIAGRGFTFTGY 120

Query: 121 Y 122
           Y
Sbjct: 121 Y 121

[Close]

BLAST of CmoCh12G013390 vs. TAIR 10
Match: AT2G19680.1 (Mitochondrial ATP synthase subunit G protein )

HSP 1 Score: 208.8 bits (530), Expect = 2.5e-54
Identity = 103/121 (85.12%), Postives = 110/121 (90.91%), Query Frame = 0


Query: 1   MASKLHQLQSKACKASQFAIKHGSSYYKQLLEQNKQYIQEPATVEKCSLLSEQLFYTRLA 60
           MASKL QLQSKAC+AS+F  KHG+SYYKQLLEQNKQYIQEPAT+EKCS LS+QL YTRLA
Sbjct: 1   MASKLVQLQSKACQASKFVAKHGNSYYKQLLEQNKQYIQEPATIEKCSELSKQLLYTRLA 60

Query: 61  SIPGRYESFWKELDCVKNLWKNRQELKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120
           SIPGRYE+F KE+D  KNL KNR  LKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY
Sbjct: 61  SIPGRYETFRKEVDYAKNLLKNRANLKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120

Query: 121 Y 122
           Y
Sbjct: 121 Y 121

[Close]

BLAST of CmoCh12G013390 vs. TAIR 10
Match: AT2G19680.2 (Mitochondrial ATP synthase subunit G protein )

HSP 1 Score: 208.8 bits (530), Expect = 2.5e-54
Identity = 103/121 (85.12%), Postives = 110/121 (90.91%), Query Frame = 0


Query: 1   MASKLHQLQSKACKASQFAIKHGSSYYKQLLEQNKQYIQEPATVEKCSLLSEQLFYTRLA 60
           MASKL QLQSKAC+AS+F  KHG+SYYKQLLEQNKQYIQEPAT+EKCS LS+QL YTRLA
Sbjct: 1   MASKLVQLQSKACQASKFVAKHGNSYYKQLLEQNKQYIQEPATIEKCSELSKQLLYTRLA 60

Query: 61  SIPGRYESFWKELDCVKNLWKNRQELKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120
           SIPGRYE+F KE+D  KNL KNR  LKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY
Sbjct: 61  SIPGRYETFRKEVDYAKNLLKNRANLKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120

Query: 121 Y 122
           Y
Sbjct: 121 Y 121

[Close]

BLAST of CmoCh12G013390 vs. TAIR 10
Match: AT4G26210.1 (Mitochondrial ATP synthase subunit G protein )

HSP 1 Score: 204.5 bits (519), Expect = 4.8e-53
Identity = 97/121 (80.17%), Postives = 111/121 (91.74%), Query Frame = 0


Query: 1   MASKLHQLQSKACKASQFAIKHGSSYYKQLLEQNKQYIQEPATVEKCSLLSEQLFYTRLA 60
           MASKL QL+SKAC+AS+F  KHG++YYKQLL++NK YIQEPAT+EKC+ LS+QL YTRLA
Sbjct: 1   MASKLLQLKSKACEASKFVSKHGTTYYKQLLDKNKMYIQEPATIEKCNELSKQLLYTRLA 60

Query: 61  SIPGRYESFWKELDCVKNLWKNRQELKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120
           SIPGR ESFWKE++ VK LWKNR +LKVEDAGIAALFGLECFAW+CAGEIVGRGFTFTGY
Sbjct: 61  SIPGRSESFWKEVNHVKGLWKNRADLKVEDAGIAALFGLECFAWYCAGEIVGRGFTFTGY 120

Query: 121 Y 122
           Y
Sbjct: 121 Y 121

[Close]

BLAST of CmoCh12G013390 vs. TAIR 10
Match: AT4G26210.2 (Mitochondrial ATP synthase subunit G protein )

HSP 1 Score: 204.5 bits (519), Expect = 4.8e-53
Identity = 97/121 (80.17%), Postives = 111/121 (91.74%), Query Frame = 0


Query: 1   MASKLHQLQSKACKASQFAIKHGSSYYKQLLEQNKQYIQEPATVEKCSLLSEQLFYTRLA 60
           MASKL QL+SKAC+AS+F  KHG++YYKQLL++NK YIQEPAT+EKC+ LS+QL YTRLA
Sbjct: 1   MASKLLQLKSKACEASKFVSKHGTTYYKQLLDKNKMYIQEPATIEKCNELSKQLLYTRLA 60

Query: 61  SIPGRYESFWKELDCVKNLWKNRQELKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120
           SIPGR ESFWKE++ VK LWKNR +LKVEDAGIAALFGLECFAW+CAGEIVGRGFTFTGY
Sbjct: 61  SIPGRSESFWKEVNHVKGLWKNRADLKVEDAGIAALFGLECFAWYCAGEIVGRGFTFTGY 120

Query: 121 Y 122
           Y
Sbjct: 121 Y 121

The following BLAST results are available for this feature:

BLAST of CmoCh12G013390 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh12G013390 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FIQ4	1.4e-63	100.00	uncharacterized protein LOC111444283 OS=Cucurbita moschata OX=3662 GN=LOC1114442...	[more]
A0A6J1HQQ0	9.7e-62	96.72	uncharacterized protein LOC111465772 OS=Cucurbita maxima OX=3661 GN=LOC111465772...	[more]
A0A6J1KB56	7.0e-60	95.08	uncharacterized protein LOC111493874 OS=Cucurbita maxima OX=3661 GN=LOC111493874...	[more]
A0A0A0LIN6	9.1e-60	95.08	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G000550 PE=3 SV=1	[more]
A0A6J1G3V3	2.0e-59	95.08	uncharacterized protein LOC111450519 OS=Cucurbita moschata OX=3662 GN=LOC1114505...	[more]

BLAST of CmoCh12G013390 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G29480.1	5.1e-55	82.64	Mitochondrial ATP synthase subunit G protein	[more]
AT2G19680.1	2.5e-54	85.12	Mitochondrial ATP synthase subunit G protein	[more]
AT2G19680.2	2.5e-54	85.12	Mitochondrial ATP synthase subunit G protein	[more]
AT4G26210.1	4.8e-53	80.17	Mitochondrial ATP synthase subunit G protein	[more]
AT4G26210.2	4.8e-53	80.17	Mitochondrial ATP synthase subunit G protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006808	ATP synthase, F0 complex, subunit G, mitochondrial	PFAM	PF04718	ATP-synt_G	coord: 15..120 e-value: 5.3E-22 score: 78.5
IPR006808	ATP synthase, F0 complex, subunit G, mitochondrial	PANTHER	PTHR12386	ATP SYNTHASE SUBUNIT	coord: 1..122
None	No IPR available	PANTHER	PTHR12386:SF34	ATPASE, F0 COMPLEX, SUBUNIT G-RELATED	coord: 1..122

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh12G013390.1	CmoCh12G013390.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015986	ATP synthesis coupled proton transport
biological_process	GO:0006412	translation
cellular_component	GO:0005829	cytosol
cellular_component	GO:0000276	mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)
cellular_component	GO:0005840	ribosome
molecular_function	GO:0015078	proton transmembrane transporter activity
molecular_function	GO:0003735	structural constituent of ribosome