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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. CCATAATTTTGGCGCCATAGCATTTGGGGCTGTTACTGAACCGATTTGCTTACGAAGCTCGAGCTGCCCCACACTCCGCTGATTCCTTTGCTCATCGCCAACCATTTTCCATCCTAAAAATTTCTCGACTCCAAATCTCTGTTTTCATGTAAAATTACCATAATTCAATCCTTTCTCTCCTTCGTGTTTCTGATTTGCCTCGATCATGCCGGGAACCATCAGAGTTTCTGGTAATTCTTTCGCATTTTTCGTCTTTAATCGATCAGTTTCTGATTTTCCGATCCTATTCTTATTCTTCTTCATGGTTGACTTTGTTTTGTTTCAGTTCTGGAGTTCATGGACCTACCTGAGCTATTGCCTTTGCCAATTTTGATTAAGAGTACGCAAATCAGTTGTTCTTTTGCTGTGTGTTTGATTTTTGGTTTTCGTTGTTTTCATTCTGGAATGGTTTCGTTTCACTGCAGTTTCCATGGGAAAAAGACAGTATGAAACATCGGAGAAAGGAGATTTCTCATTGTAATGACCAATGCCTCTGTAATTTAAGATGTTCATCTTCTTCTTGTTCTGGTTTTTGTGTTTTTAACTGTGGATTATGGTGTTTTGGTGTATATAGTCCATTGACGACGCTTCGAGATGATGTGATTCTTATAATTCAGGATGCTGGAGGGAATGAGGTATCACGTGCAGGTTTGTTCAAGGAATTTGCTGTTGAAATTGATTAGGTTATTTTAGCAAAATGAGGCTGATTGTGATTGGAATGGTTTTTTTTGGGGGGGGAAGGTGTTCAGGCGAAATCAATAGTCGAGAAGGGTTACTGGGATGATCTTTTTCCTCTTGAAGGAGGAGGCCGTGTGCATTTGAAGTTCCAGTTTGCTCTTAGTGAAGATGATCGCAGTCGAATTCGGACAATGGTATTCGCATCAAACCTTATTTTTCTCCTCAATAATGTCAATTTCTTTACTGAATTCCACATAGTTTATTCATTGTAATTGTCAACTGCACCGCTAGTAAATATGATCATTTTTAGGTTTTTCATTCGGGCTTCCTCTCAAGGTTTTAAAATGCGTATGCTAGGGAGAGGTTTCCACGTCTTAAAAAAAAATGCTTTGTTTTCCTCCCCCAACCGATGTAGAATCTCACAATCCACCCCCCTTCGGAGCTCAATATCCTTACTGGCACACCGCCTCATGTCCACCCCCTTTCGGAGCTTAATCTCCTCACTGGCACATCTACCGGTGTCTGGCTTTGATACCATTTGTAATAGTCCAAGCCCACTGTATATTATTTTTTTTGGGCTTTCTCTTTCGGGTTTCTCCTCAAAGTTTTTAAAACACGTCTGTTAGGGAGAGATTTCCACTCTCTTATAAAGAATGTTTCGTTCTCCTCCCAAATCGATGTGAGATCTCACATAAACTCTTCCCTTTGGGTCGTGTTATTATAATCACTGAGCTTGCTTCGCTCTCCTGCATGCTTCATTTGACATTTTGAGATCTCTGCATGATAACTTTGAATCACTTTAGTTGTTTCTTGATATCATCTCTACCTTTTTCACATAGAGAGAAACCGCTATGAGAAGAAAACAAGTTGAGCGTCAAGATAGAAATCTCAATAGCTCTGGAAGCAGCCTTGCTTCATCTTTTTACCTCAACCCCGAGCTCTCAGGTCAGATCCTGCTCTGGCAAAAACAAATAAGGCCAGAATCTGAATACTTTATGGTTATTAAGTAGTATGATTTTCTAGTTGTAAAGTTTTCTTTACATTGGTGTTTTTTGAAAGGTTTTTTCTTGATTTTCTGAGTGCTCCGTCTTCTCAAGATTCCCAAAAATGTCTTCTCCAAGTTGGAGATCTAAGTGCTAAAGAAGCGGCTCATCAATCTTCATCAGCATCAACTGAAGATGTCCCTGATGACAAGCCGGTTACTGAAAAAACAAACGACACTCAGCTCGATCAGGTTGAACGACTTTCAGTTGAGGTCTAATGAATCTGTAGAGCAATTTCTTGCTAAGTTCTAAAACTTGTTTCAAGATTTTTGATGGGTGTTTTTTATTTGTTTTAGAATGATGCAGACACAAATGAGGATAACCCATCAGCAATTCCTCGTGTAAACAAACCTTCACCTACCATTCGTTCAGAAAAAAAGGTTTTCCATTCTCAAGGCTCAGAGTTATCCAGATCTCCAGCAAAAGATGAAAAGAAGACCGGTTCTACAGATAGGAAAACTCCCAGCATGGTGAAAAATGTAATAAGTGCCTTTGAAAGTAACTTGACTCAGGTATATTCTGGTTGATGCTTTATAATATCATATGATTGCTTTCATAGGCTGTTTGCTTGAGTATGCTATTGTTTGAATCACATTTTGGTTTTTACATCAGGATACAACCCCTCGCATTAAACCTACCTTAAGAAGTACTCAAATCGGTGTGGTAGAGAAGCAAACATCTCTAAAAGTTTATCAGTCTAAGGAAGGAACGACAATAGACCGTCCTCTTGCACGGGAGTTGACCCATGATTTCAAGCAAAATGAACAGAAACGGAAATTCATCGAGGCTTCAGATGGGACTAAATTATCTGAGAACGCTTGGCAATCGCTAAAGTTGAAAGGGAAGAAGAATCAAGTTGGAGGAGAAAATTTGAGGGAAAAGGATCAAATGAATAAGAAGCATGATGATATAGATGCAAAGAATGATGGAGCTTATCAAAAGTCAATGCCTGAGAAGCCAGACTATGTCAAAGATGAACAGTTTTCTTCCAAAAGGTCTGGTGGTTGGATATTTCCAGATGAAAAAAGACGGGTGTGTGTCACAACAGGTGGTAATCAGATGCTAGAAGATATGGTGGGAGGTCGCACTAGCTATACATTTAGCCGTAAAGTGGAAATGAAGATTTCCACGGAAGAGGCAAGTTTGGTTTAAACAGCTTTAACTAACGGCATACATGAAGAAAAGTTAGATTTATCTGATCTTAATGAGGCAACTTGTGAGATCCTACGTCGGTTGGGGAGGGGAACGGAGCATTCCTTATAAACACGTGGAAACCTCTCCCTAGGAGATGCGTTTTAAAACCGTGAGACTAAACTAATGGCATACGTAACGGGCAAAAGCGGACAATATCTGCTAGTGGTGGGCTTGGGTTGTTACCAACTTGAGCTTCTTGGCAATCGATTGATCAAATCGAGCACCTTAAATTTCGTGACCATCTTGTGATTAACTCTTCATTTTAAATTCTTCTTGACAACCTTGAATACTAGGAACTTGCCATAGAACCACAGCCATACTCTTAAATTTCTGGACCGTACTGTTATATCTTGCTTTTGACACCCTTGCCTACATTTGCATTTGCAGAGTAGAAGGACCTCAGAAACGAGGGCAAATAGGGGGAAGCATGATCATCAAGAAATGATTAAACCAGAGAGTTCAGATGATGTAAAACCTTCTGAAGGACCACTTGCCAATGTAATTCCAAATTCACTATGAGCCACATGTTGGTTTTTATCATCTAAACTGAGATTATTGACTGATGAAAATTGTTCAAAGAGTTAAATCTTACATGTTTTAACCTTTTATTTTAAAATTAAAGGTGACTAATTATTGATGTTCTATGCTCCAAAATTCTCTTGTTTAGGCCTTCAAGATTGCAGTAATGATTGGGTTTGGAACTCTTGTTCTCCTTACCAGACAAAGGAAAAAGAAGGTATGAGATAACTTCTGTAAATCTGTTTTTTTTTTTTTTTGCTCTGTCCTATGAACATTTGTTCAAGGATGGAGTTATGCTTACATAGAGCCTTCCTTCTGTTAACCAAGTCTGATACACATGGCTTTATTCATGGGCGTGCAGAGATAAGCAGTTGGGTTATGGATCCGCACCAATTGTTTTCAAGGGATGTAAGCTTTTACTTCCATAAACAGCAACCCAGTTTTTCTTCCCCCATTCTTTTTTTATCTTCACCACATGCATATTAACTAATTTTAGTGTTCCGTACAGAATGTGTCGTGAATGTACTTGTAATTTCTGTCTCCATCCCATTGTATAAATTTTGTTCTGATCCGAAATCAACCTTATATTCTGATGTTATTTAGCTTCATTGAGGTATCAAGACAATGTCTCTGCCCCCTTATGTCAAGACGTTTATCGTAATATAAACCTCTGTGGTTCGATGTCGTAGGTTTCAGG mRNA sequence CCATAATTTTGGCGCCATAGCATTTGGGGCTGTTACTGAACCGATTTGCTTACGAAGCTCGAGCTGCCCCACACTCCGCTGATTCCTTTGCTCATCGCCAACCATTTTCCATCCTAAAAATTTCTCGACTCCAAATCTCTGTTTTCATGTAAAATTACCATAATTCAATCCTTTCTCTCCTTCGTGTTTCTGATTTGCCTCGATCATGCCGGGAACCATCAGAGTTTCTGTTCTGGAGTTCATGGACCTACCTGAGCTATTGCCTTTGCCAATTTTGATTAAGATTTCCATGGGAAAAAGACAGTATGAAACATCGGAGAAAGGAGATTTCTCATTTCCATTGACGACGCTTCGAGATGATGTGATTCTTATAATTCAGGATGCTGGAGGGAATGAGGTATCACGTGCAGGTGTTCAGGCGAAATCAATAGTCGAGAAGGGTTACTGGGATGATCTTTTTCCTCTTGAAGGAGGAGGCCGTGTGCATTTGAAGTTCCAGTTTGCTCTTAGTGAAGATGATCGCAGTCGAATTCGGACAATGAGAGAAACCGCTATGAGAAGAAAACAAGTTGAGCGTCAAGATAGAAATCTCAATAGCTCTGGAAGCAGCCTTGCTTCATCTTTTTACCTCAACCCCGAGCTCTCAGATTCCCAAAAATGTCTTCTCCAAGTTGGAGATCTAAGTGCTAAAGAAGCGGCTCATCAATCTTCATCAGCATCAACTGAAGATGTCCCTGATGACAAGCCGGTTACTGAAAAAACAAACGACACTCAGCTCGATCAGAATGATGCAGACACAAATGAGGATAACCCATCAGCAATTCCTCGTGTAAACAAACCTTCACCTACCATTCGTTCAGAAAAAAAGGTTTTCCATTCTCAAGGCTCAGAGTTATCCAGATCTCCAGCAAAAGATGAAAAGAAGACCGGTTCTACAGATAGGAAAACTCCCAGCATGGTGAAAAATGTAATAAGTGCCTTTGAAAGTAACTTGACTCAGGATACAACCCCTCGCATTAAACCTACCTTAAGAAGTACTCAAATCGGTGTGGTAGAGAAGCAAACATCTCTAAAAGTTTATCAGTCTAAGGAAGGAACGACAATAGACCGTCCTCTTGCACGGGAGTTGACCCATGATTTCAAGCAAAATGAACAGAAACGGAAATTCATCGAGGCTTCAGATGGGACTAAATTATCTGAGAACGCTTGGCAATCGCTAAAGTTGAAAGGGAAGAAGAATCAAGTTGGAGGAGAAAATTTGAGGGAAAAGGATCAAATGAATAAGAAGCATGATGATATAGATGCAAAGAATGATGGAGCTTATCAAAAGTCAATGCCTGAGAAGCCAGACTATGTCAAAGATGAACAGTTTTCTTCCAAAAGGTCTGGTGGTTGGATATTTCCAGATGAAAAAAGACGGGTGTGTGTCACAACAGGTGGTAATCAGATGCTAGAAGATATGGTGGGAGGTCGCACTAGCTATACATTTAGCCGTAAAGTGGAAATGAAGATTTCCACGGAAGAGAGTAGAAGGACCTCAGAAACGAGGGCAAATAGGGGGAAGCATGATCATCAAGAAATGATTAAACCAGAGAGTTCAGATGATGTAAAACCTTCTGAAGGACCACTTGCCAATGCCTTCAAGATTGCAGTAATGATTGGGTTTGGAACTCTTGTTCTCCTTACCAGACAAAGGAAAAAGAAGAGATAAGCAGTTGGGTTATGGATCCGCACCAATTGTTTTCAAGGGATGTAAGCTTTTACTTCCATAAACAGCAACCCAGTTTTTCTTCCCCCATTCTTTTTTTATCTTCACCACATGCATATTAACTAATTTTAGTGTTCCGTACAGAATGTGTCGTGAATGTACTTGTAATTTCTGTCTCCATCCCATTGTATAAATTTTGTTCTGATCCGAAATCAACCTTATATTCTGATGTTATTTAGCTTCATTGAGGTATCAAGACAATGTCTCTGCCCCCTTATGTCAAGACGTTTATCGTAATATAAACCTCTGTGGTTCGATGTCGTAGGTTTCAGG Coding sequence (CDS) ATGCCGGGAACCATCAGAGTTTCTGTTCTGGAGTTCATGGACCTACCTGAGCTATTGCCTTTGCCAATTTTGATTAAGATTTCCATGGGAAAAAGACAGTATGAAACATCGGAGAAAGGAGATTTCTCATTTCCATTGACGACGCTTCGAGATGATGTGATTCTTATAATTCAGGATGCTGGAGGGAATGAGGTATCACGTGCAGGTGTTCAGGCGAAATCAATAGTCGAGAAGGGTTACTGGGATGATCTTTTTCCTCTTGAAGGAGGAGGCCGTGTGCATTTGAAGTTCCAGTTTGCTCTTAGTGAAGATGATCGCAGTCGAATTCGGACAATGAGAGAAACCGCTATGAGAAGAAAACAAGTTGAGCGTCAAGATAGAAATCTCAATAGCTCTGGAAGCAGCCTTGCTTCATCTTTTTACCTCAACCCCGAGCTCTCAGATTCCCAAAAATGTCTTCTCCAAGTTGGAGATCTAAGTGCTAAAGAAGCGGCTCATCAATCTTCATCAGCATCAACTGAAGATGTCCCTGATGACAAGCCGGTTACTGAAAAAACAAACGACACTCAGCTCGATCAGAATGATGCAGACACAAATGAGGATAACCCATCAGCAATTCCTCGTGTAAACAAACCTTCACCTACCATTCGTTCAGAAAAAAAGGTTTTCCATTCTCAAGGCTCAGAGTTATCCAGATCTCCAGCAAAAGATGAAAAGAAGACCGGTTCTACAGATAGGAAAACTCCCAGCATGGTGAAAAATGTAATAAGTGCCTTTGAAAGTAACTTGACTCAGGATACAACCCCTCGCATTAAACCTACCTTAAGAAGTACTCAAATCGGTGTGGTAGAGAAGCAAACATCTCTAAAAGTTTATCAGTCTAAGGAAGGAACGACAATAGACCGTCCTCTTGCACGGGAGTTGACCCATGATTTCAAGCAAAATGAACAGAAACGGAAATTCATCGAGGCTTCAGATGGGACTAAATTATCTGAGAACGCTTGGCAATCGCTAAAGTTGAAAGGGAAGAAGAATCAAGTTGGAGGAGAAAATTTGAGGGAAAAGGATCAAATGAATAAGAAGCATGATGATATAGATGCAAAGAATGATGGAGCTTATCAAAAGTCAATGCCTGAGAAGCCAGACTATGTCAAAGATGAACAGTTTTCTTCCAAAAGGTCTGGTGGTTGGATATTTCCAGATGAAAAAAGACGGGTGTGTGTCACAACAGGTGGTAATCAGATGCTAGAAGATATGGTGGGAGGTCGCACTAGCTATACATTTAGCCGTAAAGTGGAAATGAAGATTTCCACGGAAGAGAGTAGAAGGACCTCAGAAACGAGGGCAAATAGGGGGAAGCATGATCATCAAGAAATGATTAAACCAGAGAGTTCAGATGATGTAAAACCTTCTGAAGGACCACTTGCCAATGCCTTCAAGATTGCAGTAATGATTGGGTTTGGAACTCTTGTTCTCCTTACCAGACAAAGGAAAAAGAAGAGATAA Protein sequence MPGTIRVSVLEFMDLPELLPLPILIKISMGKRQYETSEKGDFSFPLTTLRDDVILIIQDAGGNEVSRAGVQAKSIVEKGYWDDLFPLEGGGRVHLKFQFALSEDDRSRIRTMRETAMRRKQVERQDRNLNSSGSSLASSFYLNPELSDSQKCLLQVGDLSAKEAAHQSSSASTEDVPDDKPVTEKTNDTQLDQNDADTNEDNPSAIPRVNKPSPTIRSEKKVFHSQGSELSRSPAKDEKKTGSTDRKTPSMVKNVISAFESNLTQDTTPRIKPTLRSTQIGVVEKQTSLKVYQSKEGTTIDRPLARELTHDFKQNEQKRKFIEASDGTKLSENAWQSLKLKGKKNQVGGENLREKDQMNKKHDDIDAKNDGAYQKSMPEKPDYVKDEQFSSKRSGGWIFPDEKRRVCVTTGGNQMLEDMVGGRTSYTFSRKVEMKISTEESRRTSETRANRGKHDHQEMIKPESSDDVKPSEGPLANAFKIAVMIGFGTLVLLTRQRKKKR
Homology
BLAST of CmoCh12G013270 vs. ExPASy TrEMBL
Match: A0A6J1FC61 (uncharacterized protein LOC111444070 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111444070 PE=4 SV=1) HSP 1 Score: 958.7 bits (2477), Expect = 9.2e-276 Identity = 501/501 (100.00%), Postives = 501/501 (100.00%), Query Frame = 0
Query: 1 MPGTIRVSVLEFMDLPELLPLPILIKISMGKRQYETSEKGDFSFPLTTLRDDVILIIQDA 60
MPGTIRVSVLEFMDLPELLPLPILIKISMGKRQYETSEKGDFSFPLTTLRDDVILIIQDA
Sbjct: 1 MPGTIRVSVLEFMDLPELLPLPILIKISMGKRQYETSEKGDFSFPLTTLRDDVILIIQDA 60
Query: 61 GGNEVSRAGVQAKSIVEKGYWDDLFPLEGGGRVHLKFQFALSEDDRSRIRTMRETAMRRK 120
GGNEVSRAGVQAKSIVEKGYWDDLFPLEGGGRVHLKFQFALSEDDRSRIRTMRETAMRRK
Sbjct: 61 GGNEVSRAGVQAKSIVEKGYWDDLFPLEGGGRVHLKFQFALSEDDRSRIRTMRETAMRRK 120
Query: 121 QVERQDRNLNSSGSSLASSFYLNPELSDSQKCLLQVGDLSAKEAAHQSSSASTEDVPDDK 180
QVERQDRNLNSSGSSLASSFYLNPELSDSQKCLLQVGDLSAKEAAHQSSSASTEDVPDDK
Sbjct: 121 QVERQDRNLNSSGSSLASSFYLNPELSDSQKCLLQVGDLSAKEAAHQSSSASTEDVPDDK 180
Query: 181 PVTEKTNDTQLDQNDADTNEDNPSAIPRVNKPSPTIRSEKKVFHSQGSELSRSPAKDEKK 240
PVTEKTNDTQLDQNDADTNEDNPSAIPRVNKPSPTIRSEKKVFHSQGSELSRSPAKDEKK
Sbjct: 181 PVTEKTNDTQLDQNDADTNEDNPSAIPRVNKPSPTIRSEKKVFHSQGSELSRSPAKDEKK 240
Query: 241 TGSTDRKTPSMVKNVISAFESNLTQDTTPRIKPTLRSTQIGVVEKQTSLKVYQSKEGTTI 300
TGSTDRKTPSMVKNVISAFESNLTQDTTPRIKPTLRSTQIGVVEKQTSLKVYQSKEGTTI
Sbjct: 241 TGSTDRKTPSMVKNVISAFESNLTQDTTPRIKPTLRSTQIGVVEKQTSLKVYQSKEGTTI 300
Query: 301 DRPLARELTHDFKQNEQKRKFIEASDGTKLSENAWQSLKLKGKKNQVGGENLREKDQMNK 360
DRPLARELTHDFKQNEQKRKFIEASDGTKLSENAWQSLKLKGKKNQVGGENLREKDQMNK
Sbjct: 301 DRPLARELTHDFKQNEQKRKFIEASDGTKLSENAWQSLKLKGKKNQVGGENLREKDQMNK 360
Query: 361 KHDDIDAKNDGAYQKSMPEKPDYVKDEQFSSKRSGGWIFPDEKRRVCVTTGGNQMLEDMV 420
KHDDIDAKNDGAYQKSMPEKPDYVKDEQFSSKRSGGWIFPDEKRRVCVTTGGNQMLEDMV
Sbjct: 361 KHDDIDAKNDGAYQKSMPEKPDYVKDEQFSSKRSGGWIFPDEKRRVCVTTGGNQMLEDMV 420
Query: 421 GGRTSYTFSRKVEMKISTEESRRTSETRANRGKHDHQEMIKPESSDDVKPSEGPLANAFK 480
GGRTSYTFSRKVEMKISTEESRRTSETRANRGKHDHQEMIKPESSDDVKPSEGPLANAFK
Sbjct: 421 GGRTSYTFSRKVEMKISTEESRRTSETRANRGKHDHQEMIKPESSDDVKPSEGPLANAFK 480
Query: 481 IAVMIGFGTLVLLTRQRKKKR 502
IAVMIGFGTLVLLTRQRKKKR
Sbjct: 481 IAVMIGFGTLVLLTRQRKKKR 501
BLAST of CmoCh12G013270 vs. ExPASy TrEMBL
Match: A0A6J1FBB0 (uncharacterized protein LOC111444070 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444070 PE=4 SV=1) HSP 1 Score: 951.8 bits (2459), Expect = 1.1e-273 Identity = 501/508 (98.62%), Postives = 501/508 (98.62%), Query Frame = 0
Query: 1 MPGTIRVSVLEFMDLPELLPLPILIKISMGKRQYETSEKGDFSFPLTTLRDDVILIIQDA 60
MPGTIRVSVLEFMDLPELLPLPILIKISMGKRQYETSEKGDFSFPLTTLRDDVILIIQDA
Sbjct: 1 MPGTIRVSVLEFMDLPELLPLPILIKISMGKRQYETSEKGDFSFPLTTLRDDVILIIQDA 60
Query: 61 GGNEVSRAGVQAKSIVEKGYWDDLFPLEGGGRVHLKFQFALSEDDRSRIRTMRETAMRRK 120
GGNEVSRAGVQAKSIVEKGYWDDLFPLEGGGRVHLKFQFALSEDDRSRIRTMRETAMRRK
Sbjct: 61 GGNEVSRAGVQAKSIVEKGYWDDLFPLEGGGRVHLKFQFALSEDDRSRIRTMRETAMRRK 120
Query: 121 QVERQDRNLNSSGSSLASSFYLNPELSDSQKCLLQVGDLSAKEAAHQSSSASTEDVPDDK 180
QVERQDRNLNSSGSSLASSFYLNPELSDSQKCLLQVGDLSAKEAAHQSSSASTEDVPDDK
Sbjct: 121 QVERQDRNLNSSGSSLASSFYLNPELSDSQKCLLQVGDLSAKEAAHQSSSASTEDVPDDK 180
Query: 181 PVTEKTNDTQLDQ-------NDADTNEDNPSAIPRVNKPSPTIRSEKKVFHSQGSELSRS 240
PVTEKTNDTQLDQ NDADTNEDNPSAIPRVNKPSPTIRSEKKVFHSQGSELSRS
Sbjct: 181 PVTEKTNDTQLDQVERLSVENDADTNEDNPSAIPRVNKPSPTIRSEKKVFHSQGSELSRS 240
Query: 241 PAKDEKKTGSTDRKTPSMVKNVISAFESNLTQDTTPRIKPTLRSTQIGVVEKQTSLKVYQ 300
PAKDEKKTGSTDRKTPSMVKNVISAFESNLTQDTTPRIKPTLRSTQIGVVEKQTSLKVYQ
Sbjct: 241 PAKDEKKTGSTDRKTPSMVKNVISAFESNLTQDTTPRIKPTLRSTQIGVVEKQTSLKVYQ 300
Query: 301 SKEGTTIDRPLARELTHDFKQNEQKRKFIEASDGTKLSENAWQSLKLKGKKNQVGGENLR 360
SKEGTTIDRPLARELTHDFKQNEQKRKFIEASDGTKLSENAWQSLKLKGKKNQVGGENLR
Sbjct: 301 SKEGTTIDRPLARELTHDFKQNEQKRKFIEASDGTKLSENAWQSLKLKGKKNQVGGENLR 360
Query: 361 EKDQMNKKHDDIDAKNDGAYQKSMPEKPDYVKDEQFSSKRSGGWIFPDEKRRVCVTTGGN 420
EKDQMNKKHDDIDAKNDGAYQKSMPEKPDYVKDEQFSSKRSGGWIFPDEKRRVCVTTGGN
Sbjct: 361 EKDQMNKKHDDIDAKNDGAYQKSMPEKPDYVKDEQFSSKRSGGWIFPDEKRRVCVTTGGN 420
Query: 421 QMLEDMVGGRTSYTFSRKVEMKISTEESRRTSETRANRGKHDHQEMIKPESSDDVKPSEG 480
QMLEDMVGGRTSYTFSRKVEMKISTEESRRTSETRANRGKHDHQEMIKPESSDDVKPSEG
Sbjct: 421 QMLEDMVGGRTSYTFSRKVEMKISTEESRRTSETRANRGKHDHQEMIKPESSDDVKPSEG 480
Query: 481 PLANAFKIAVMIGFGTLVLLTRQRKKKR 502
PLANAFKIAVMIGFGTLVLLTRQRKKKR
Sbjct: 481 PLANAFKIAVMIGFGTLVLLTRQRKKKR 508
BLAST of CmoCh12G013270 vs. ExPASy TrEMBL
Match: A0A6J1FGW0 (uncharacterized protein LOC111444070 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111444070 PE=4 SV=1) HSP 1 Score: 831.2 bits (2146), Expect = 2.2e-237 Identity = 450/508 (88.58%), Postives = 450/508 (88.58%), Query Frame = 0
Query: 1 MPGTIRVSVLEFMDLPELLPLPILIKISMGKRQYETSEKGDFSFPLTTLRDDVILIIQDA 60
MPGTIRVSVLEFMDLPELLPLPILIKISMGKRQYETSEKGDFSFPLTTLRDDVILIIQDA
Sbjct: 1 MPGTIRVSVLEFMDLPELLPLPILIKISMGKRQYETSEKGDFSFPLTTLRDDVILIIQDA 60
Query: 61 GGNEVSRAGVQAKSIVEKGYWDDLFPLEGGGRVHLKFQFALSEDDRSRIRTMRETAMRRK 120
GGNEVSRAGVQAKSIVEKGYWDDLFPLEGGGRVHLKFQFALSEDDRSRIRTMRETAMRRK
Sbjct: 61 GGNEVSRAGVQAKSIVEKGYWDDLFPLEGGGRVHLKFQFALSEDDRSRIRTMRETAMRRK 120
Query: 121 QVERQDRNLNSSGSSLASSFYLNPELSDSQKCLLQVGDLSAKEAAHQSSSASTEDVPDDK 180
QVERQDRNLNSSGSSLASSFYLNPELSDSQKCLLQVGDLSAKEAAHQSSSASTEDVPDDK
Sbjct: 121 QVERQDRNLNSSGSSLASSFYLNPELSDSQKCLLQVGDLSAKEAAHQSSSASTEDVPDDK 180
Query: 181 PVTEKTNDTQLDQ-------NDADTNEDNPSAIPRVNKPSPTIRSEKKVFHSQGSELSRS 240
PVTEKTNDTQLDQ NDADTNEDNPSAIPRVNKPSPTIRSEKKVFHSQGSELSRS
Sbjct: 181 PVTEKTNDTQLDQVERLSVENDADTNEDNPSAIPRVNKPSPTIRSEKKVFHSQGSELSRS 240
Query: 241 PAKDEKKTGSTDRKTPSMVKNVISAFESNLTQDTTPRIKPTLRSTQIGVVEKQTSLKVYQ 300
PAKDEKKTGSTDRKTPSMVKNVISAFESNLTQDTTPRIKPTLR
Sbjct: 241 PAKDEKKTGSTDRKTPSMVKNVISAFESNLTQDTTPRIKPTLRR---------------- 300
Query: 301 SKEGTTIDRPLARELTHDFKQNEQKRKFIEASDGTKLSENAWQSLKLKGKKNQVGGENLR 360
TKLSENAWQSLKLKGKKNQVGGENLR
Sbjct: 301 ----------------------------------TKLSENAWQSLKLKGKKNQVGGENLR 360
Query: 361 EKDQMNKKHDDIDAKNDGAYQKSMPEKPDYVKDEQFSSKRSGGWIFPDEKRRVCVTTGGN 420
EKDQMNKKHDDIDAKNDGAYQKSMPEKPDYVKDEQFSSKRSGGWIFPDEKRRVCVTTGGN
Sbjct: 361 EKDQMNKKHDDIDAKNDGAYQKSMPEKPDYVKDEQFSSKRSGGWIFPDEKRRVCVTTGGN 420
Query: 421 QMLEDMVGGRTSYTFSRKVEMKISTEESRRTSETRANRGKHDHQEMIKPESSDDVKPSEG 480
QMLEDMVGGRTSYTFSRKVEMKISTEESRRTSETRANRGKHDHQEMIKPESSDDVKPSEG
Sbjct: 421 QMLEDMVGGRTSYTFSRKVEMKISTEESRRTSETRANRGKHDHQEMIKPESSDDVKPSEG 458
Query: 481 PLANAFKIAVMIGFGTLVLLTRQRKKKR 502
PLANAFKIAVMIGFGTLVLLTRQRKKKR
Sbjct: 481 PLANAFKIAVMIGFGTLVLLTRQRKKKR 458
BLAST of CmoCh12G013270 vs. ExPASy TrEMBL
Match: A0A6J1FC67 (uncharacterized protein LOC111444070 isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC111444070 PE=4 SV=1) HSP 1 Score: 818.5 bits (2113), Expect = 1.5e-233 Identity = 434/445 (97.53%), Postives = 434/445 (97.53%), Query Frame = 0
Query: 64 EVSRAGVQAKSIVEKGYWDDLFPLEGGGRVHLKFQFALSEDDRSRIRTMRETAMRRKQVE 123
E R VQAKSIVEKGYWDDLFPLEGGGRVHLKFQFALSEDDRSRIRTMRETAMRRKQVE
Sbjct: 3 EGMRYHVQAKSIVEKGYWDDLFPLEGGGRVHLKFQFALSEDDRSRIRTMRETAMRRKQVE 62
Query: 124 RQDRNLNSSGSSLASSFYLNPELSDSQKCLLQVGDLSAKEAAHQSSSASTEDVPDDKPVT 183
RQDRNLNSSGSSLASSFYLNPELSDSQKCLLQVGDLSAKEAAHQSSSASTEDVPDDKPVT
Sbjct: 63 RQDRNLNSSGSSLASSFYLNPELSDSQKCLLQVGDLSAKEAAHQSSSASTEDVPDDKPVT 122
Query: 184 EKTNDTQLDQ-------NDADTNEDNPSAIPRVNKPSPTIRSEKKVFHSQGSELSRSPAK 243
EKTNDTQLDQ NDADTNEDNPSAIPRVNKPSPTIRSEKKVFHSQGSELSRSPAK
Sbjct: 123 EKTNDTQLDQVERLSVENDADTNEDNPSAIPRVNKPSPTIRSEKKVFHSQGSELSRSPAK 182
Query: 244 DEKKTGSTDRKTPSMVKNVISAFESNLTQDTTPRIKPTLRSTQIGVVEKQTSLKVYQSKE 303
DEKKTGSTDRKTPSMVKNVISAFESNLTQDTTPRIKPTLRSTQIGVVEKQTSLKVYQSKE
Sbjct: 183 DEKKTGSTDRKTPSMVKNVISAFESNLTQDTTPRIKPTLRSTQIGVVEKQTSLKVYQSKE 242
Query: 304 GTTIDRPLARELTHDFKQNEQKRKFIEASDGTKLSENAWQSLKLKGKKNQVGGENLREKD 363
GTTIDRPLARELTHDFKQNEQKRKFIEASDGTKLSENAWQSLKLKGKKNQVGGENLREKD
Sbjct: 243 GTTIDRPLARELTHDFKQNEQKRKFIEASDGTKLSENAWQSLKLKGKKNQVGGENLREKD 302
Query: 364 QMNKKHDDIDAKNDGAYQKSMPEKPDYVKDEQFSSKRSGGWIFPDEKRRVCVTTGGNQML 423
QMNKKHDDIDAKNDGAYQKSMPEKPDYVKDEQFSSKRSGGWIFPDEKRRVCVTTGGNQML
Sbjct: 303 QMNKKHDDIDAKNDGAYQKSMPEKPDYVKDEQFSSKRSGGWIFPDEKRRVCVTTGGNQML 362
Query: 424 EDMVGGRTSYTFSRKVEMKISTEESRRTSETRANRGKHDHQEMIKPESSDDVKPSEGPLA 483
EDMVGGRTSYTFSRKVEMKISTEESRRTSETRANRGKHDHQEMIKPESSDDVKPSEGPLA
Sbjct: 363 EDMVGGRTSYTFSRKVEMKISTEESRRTSETRANRGKHDHQEMIKPESSDDVKPSEGPLA 422
Query: 484 NAFKIAVMIGFGTLVLLTRQRKKKR 502
NAFKIAVMIGFGTLVLLTRQRKKKR
Sbjct: 423 NAFKIAVMIGFGTLVLLTRQRKKKR 447
BLAST of CmoCh12G013270 vs. ExPASy TrEMBL
Match: A0A6J1HMF6 (uncharacterized protein LOC111465530 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111465530 PE=4 SV=1) HSP 1 Score: 798.1 bits (2060), Expect = 2.1e-227 Identity = 433/502 (86.25%), Postives = 443/502 (88.25%), Query Frame = 0
Query: 1 MPGTIRVSVLEFMDLPELLPLPILIKISMGKRQYETSEKGDFSFPLTTLRDDVILIIQDA 60
MPGTIRVSVLEFMDLPELLPLPILIKISMGKRQYETSEKGDFSFPLTTLRDDVILIIQDA
Sbjct: 1 MPGTIRVSVLEFMDLPELLPLPILIKISMGKRQYETSEKGDFSFPLTTLRDDVILIIQDA 60
Query: 61 GGNEVSRAGVQAKSIVEKGYWDDLFPLEGGGRVHLKFQFALSEDDRSRIRTMRETAMRRK 120
GGNEVSRAGVQAKSIVEKG+WDDLFPLEGGGRVHLKFQFALSEDDRSRIRTMRETAMRRK
Sbjct: 61 GGNEVSRAGVQAKSIVEKGFWDDLFPLEGGGRVHLKFQFALSEDDRSRIRTMRETAMRRK 120
Query: 121 QVERQDRNLNSSGSSLASSFYLNPELSDSQKCLLQVGDLSAKEAAHQSSSASTEDVPDDK 180
QVERQDRNLNSSGSSLASSFYLNPELSDSQKCLLQVGDLSAKEAAHQSSSASTED+PD+K
Sbjct: 121 QVERQDRNLNSSGSSLASSFYLNPELSDSQKCLLQVGDLSAKEAAHQSSSASTEDIPDEK 180
Query: 181 PVTEKTNDTQLDQNDADTNEDNPSAIPRVN-KPSPTIRSEKKVFHSQGSELSRSPAKDEK 240
VTEKTNDT+LDQNDAD NE+NPSAIP VN +PSPTIRSEKKVFHSQGSELSRSPAKDEK
Sbjct: 181 LVTEKTNDTRLDQNDADRNEENPSAIPHVNHQPSPTIRSEKKVFHSQGSELSRSPAKDEK 240
Query: 241 KTGSTDRKTPSMVKNVISAFESNLTQDTTPRIKPTLRSTQIGVVEKQTSLKVYQSKEGTT 300
KTGSTDRKTPSMVKNVISAFESNLTQDTTPRIKPTLR
Sbjct: 241 KTGSTDRKTPSMVKNVISAFESNLTQDTTPRIKPTLRR---------------------- 300
Query: 301 IDRPLARELTHDFKQNEQKRKFIEASDGTKLSENAWQSLKLKGKKNQVGGENLREKDQMN 360
TKLSE+A Q LKLKGKKNQVGGENLREKDQ+N
Sbjct: 301 ----------------------------TKLSEDARQLLKLKGKKNQVGGENLREKDQIN 360
Query: 361 KKHDDIDAKNDGAYQKSMPEKPDYVKDEQFSSKRSGGWIFPDEKRRVCVTTGGNQMLEDM 420
KKHDDIDAKNDG+YQKSMPEKPD+VKDEQFSSKRSGGWIFPDEK RVCVTTGGNQMLED
Sbjct: 361 KKHDDIDAKNDGSYQKSMPEKPDHVKDEQFSSKRSGGWIFPDEKGRVCVTTGGNQMLEDT 420
Query: 421 VGGRTSYTFSRKVEMKISTEESRRTSETRANRGKHDHQEMIKPESSDDVKPSEGPLANAF 480
VGGRTSYTFSRKVEMKISTEESRRTSETRANRGKHDHQEMIKPESSDDVKPSEGPLANAF
Sbjct: 421 VGGRTSYTFSRKVEMKISTEESRRTSETRANRGKHDHQEMIKPESSDDVKPSEGPLANAF 452
Query: 481 KIAVMIGFGTLVLLTRQRKKKR 502
KIAVMIGFGTLVLLTRQRKKKR
Sbjct: 481 KIAVMIGFGTLVLLTRQRKKKR 452
BLAST of CmoCh12G013270 vs. TAIR 10
Match: AT5G56850.1 (unknown protein; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 110.2 bits (274), Expect = 5.0e-24 Identity = 145/562 (25.80%), Postives = 251/562 (44.66%), Query Frame = 0
Query: 1 MPGTIRVSVLEFMDLPELLP--LPILIKISMGKRQYETSEKGDFSFPLTTLRDDVILIIQ 60
MPGTI+VSVL +D+ P IK++MGK +Y+TS+ GD+ FP+T LR+++I+ +
Sbjct: 1 MPGTIQVSVLGLIDVQTSSPGSSNTSIKVAMGKLEYQTSDSGDYIFPVTRLRENLIVTLL 60
Query: 61 DAGGNEVSRAGVQAKSIVEKGYWDDLFPLEGGGRVHLKFQFALSEDDRSRIRTMRETAMR 120
D GN++ + ++ + I+E G+ ++ G G V LK QF LSE+DR+RIR +R++A+R
Sbjct: 61 DVNGNQILQKEIETRMIIESGFLEEKLSFNGYGNVQLKMQFVLSEEDRNRIRFLRQSALR 120
Query: 121 RKQVERQDRNLNSSGSSLAS--SFYLNPELSDSQKCLLQVGDLSAKEAAHQSSSASTEDV 180
+K E + + + S+AS S + + D +L + ++A + V
Sbjct: 121 KKHEELVNGSSFTKSKSIASDLSSLSSMQSRDIVAVASSKTNLGLSQETKLKTNADRDPV 180
Query: 181 --------PDDKPVTEKTNDTQLDQNDADTNEDNP--------SAIPR----VNKPSPTI 240
P+ K EKTN QL +D +++ P S + + +NKPS +
Sbjct: 181 SSNLIMWKPEVKDSVEKTN-IQLSSSDVSSSKKVPEVKKLESVSLVKQEDKGLNKPSKKL 240
Query: 241 RSEKKVFHSQGSELSRSPAKDEKKTGSTDRKTPSMVKNVISAFESNLTQ-DTTPRIKPTL 300
+ V + + + +K KK T+ KTP V +++ E+ L++ + P+ K
Sbjct: 241 IEAESVLLVKQED--KGLSKPRKK--FTEAKTPESV-SLVKQEETGLSKPERKPKRKSMR 300
Query: 301 RS---TQIGVVEKQTS---LKVYQSKEGTTIDRPLARELTHDFKQNEQKRKFIEASDGTK 360
RS + + V K S +KV Q + T A+ T K E+K K ++ T
Sbjct: 301 RSMSDSNLNNVRKMISNFEVKVTQDTKIRT-----AKIQTDSCKDAEEKTKAQPPAESTV 360
Query: 361 LSENAWQS--LKLKGKKNQVGGENLREKDQM-----NKKHDDIDAKN------------- 420
E + + + + V +N D + +++ DI+ K+
Sbjct: 361 NLEKSEERKIISFNNMEKSVCSDNTDRCDDLVIVSRDERTMDIEDKSLEHSTRRSDLLST 420
Query: 421 -------DGAYQKSMPEKPDYVKDEQFSSKR-SGGWIFPDEKRRVCVTT--GGNQMLEDM 480
+ + K ++KD Q + R S WIFPDE + +C T G + D+
Sbjct: 421 QRRSLVVEVRDDEKKQNKSVWLKDSQLENARGSRLWIFPDEAKDLCCETDLGTRHLDLDL 480
Query: 481 V-GGRTSYTFSRKVEMKISTEESRRTSETRANRGKH----DHQEMIKPESSDDVKPSEGP 497
I SR + + N + + K E+S + + S P
Sbjct: 481 AEANLLQKRIDESTRENIGERGSRCINIAKINSNNKWTNIERSKKQKSENSAESESSGRP 540
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1FC61 | 9.2e-276 | 100.00 | uncharacterized protein LOC111444070 isoform X2 OS=Cucurbita moschata OX=3662 GN... | [more] |
| A0A6J1FBB0 | 1.1e-273 | 98.62 | uncharacterized protein LOC111444070 isoform X1 OS=Cucurbita moschata OX=3662 GN... | [more] |
| A0A6J1FGW0 | 2.2e-237 | 88.58 | uncharacterized protein LOC111444070 isoform X3 OS=Cucurbita moschata OX=3662 GN... | [more] |
| A0A6J1FC67 | 1.5e-233 | 97.53 | uncharacterized protein LOC111444070 isoform X4 OS=Cucurbita moschata OX=3662 GN... | [more] |
| A0A6J1HMF6 | 2.1e-227 | 86.25 | uncharacterized protein LOC111465530 isoform X2 OS=Cucurbita maxima OX=3661 GN=L... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT5G56850.1 | 5.0e-24 | 25.80 | unknown protein; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth ... | [more] |
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 437..472 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 187..211 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 437..468 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 357..387 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 214..246 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 164..252 |
| None | No IPR available | PANTHER | PTHR36810 | BNACNNG47150D PROTEIN | coord: 1..229
coord: 235..500 |
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| cellular_component |
GO:0016021 |
integral component of membrane |
|
