CmoCh12G013260 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGGAGAGGAAGGCGAAAATTGTGATTATTGGCGCCGGAATGGCGGGACTCACGGCGGCGAATAGGCTCTACACGGCGCCCGGTTCGGCGGATTTGTTCGATATCTCCGTCGTGGAGTTCATGGGCCAGAAAATAGAAATGGGTGCCACGTGGATCCACGGTATCCGCGGCAGCCCAATTCATGAAATCGCCGATCAAATCAACGCCCTTCATTCTGACCAGCCATGGGAGTTCATGAACGCCTGGTCCGCCCACTCTACTACCGTCGCAGAAGGTGGCGTCGAGATCTCGCCGGCCATCATCGACCCCGTTTCCTCTCTCTTCACGAACCTCATTGATTTCTCTCAGGGAAAAATCGCCGGCGACTCCGACTTTCTCCGGCAAGCAAAGTCCGACAAGCTCAGCATCGGAGCTTATCTCCGGCGAGGCCTTGATTCGTACTTGATTTCTAAAAATGGCGAAATCGAGTTCAACGAGTGTAAAGGATGGAACCAAAAATCCCTCGAGGAAGCTATTTTCGCCATGTATGAAAACATCCAAAGAACTTACACCTCCGCCGGAGAGCTCTCGACGGTGGATCTCGTTGCGGAAAGTGAGTACCAAGTGTTCCCCGGCGATGAAATCACCATCCCCAAAGGCTATTCGACCGTAATCCAATCAATCGCCTCTATTCTTCCCCCTGGTTTAGTCCAATTGAACAAAAATGTCACCAAAATCGAATGGCATCCCGAACCAGACGCCCGGAATGTTCCAACGCCGGTGAGAATCCATTTTTCCGACGGGTCCGACATATCCGCCGATCACGTAATCGTCACCGTTTCCCTCGTAGTCCTCAAGGCTGGAACGCAACAAGAATCCGGTATGTTTAATCCGCCGTTGCCGTCGTTCAAAACAGAGGCGATTTCCCGGCTCGGATGTTGACTCTGGCAAATCGGATGTCGACGAAAAAATTGGCCGAAGGTTTCTTCGAAGGAAAAATTAGCGGAAGTAAAAGGAGAGAGAGAGAGATTCGCTGGTAATGCTGAAGACTCGATATATTTATTTTACATCCGTTGAATGGTTTAAATAATAAATCTAATTACAAAAATAGAAAAACCAAATATACAAAAATAGAATAAGTGGACGAAGACTCCGCCACTCTGCCAAAACAATGGCCCCTAGAATCACGCTCCTCCATTCGCGTGAACTCATATGTTTTTACAAACCTAACTAAATAAGGCAGAACTTTTATTTAACAATCTCCTCCTAAAAGCTGTACCTTATTATTTGAACTCCGATCTTTGAGCGTAGTTCTTCAAATTTCACCCGCGCCAGGGACTTGGTGAAAATGTCTCCAAGTTGTTCCTCTGTTCGGATGAAATCAATTTTGATGAGCCCTCGATCTGCACATTCTCGAATGTAGTGGAATCTGGTTTCTATGTGCTTGCTCCGGTCGTGCAAAATTGGATTTTTGATCAGGGAGATCGTAGCTTTGTTGTCTACGTATAGCATTGGTGGATCGCTTTCTCTCCCGATGAGTTCTTCCATTAGTCGTGCAAGCCAGATCCCTTGAGTTGCTGCCATCGAAGCGGCGATGTATTCTGCTTCGCAGGAAGACAAAGCAACTACCTTCTGTTTTGTTGATTGCCAGCAGATCGCGCCGCCTGAGAGAAAGTAGATCATTCCGCTGGTGCTCTTACGATCATCAACGTCACCGGCCATGTCACTATCGCTGTAGTCGACCAGTTTGAGTTTCTCCTTTTCGCTCCCAGCGCAGTATCTTACGCCCCAGCCTCTGGTTCCGGCTACATAGCGCAGGATGCGCTTGACAGCCACTAGATGCTCCTCCCTAGGTGCTTCCATAAACCTGCTCACATATCCAACAGAATAAGCAAGATCAGGACGAAAGTTTACCAGATAGCGCAGACTCCCGACAATGCTGCGGTAATTGGTGGAGTCGACTGTCGTCGTAGTGCCGGCCTTCCTTAGTTGAAGTCGGGCCTCCATTGGCGTCCTGGTAGGATTACTGTCCACAAGCCCAGTTGTGTCCAGCAGCTTCCTCGCGTATGCACTTTGGCAGATGGAGATGCCAGAAGAGTTCTGTTGCACTTCGATGCCGAGGTAGTAGCTGAGCACACCGAGATCGCTCATCTCGAAGTTTTTCGACATCTCCTTCTTGAACCTTCCGAGGACTCCCACGTCGCCTCCAGTGATTATGAGGTCGTCGACGTACACTCCCACGATCAGTCGCTTTTTGCCGTGGCCGTACGTGTACATGCCATGCTCAGAGGCACAACGTTTGAAATTCAGTGACAGTAGGGTACTGTCGAGCTTCGCGTTCCAGGCTCGTGGGGCTTGTCGAAGCCCGTAGAGTGCTTTGTGCAGGCGCAGTACCTTATTAGGGTTGTCGTTATCCAGGAAGCCAGGTGGTTGTCGAACATAGACGGTCTCCTTCAACTCTCCGTTAAGGAAAGCAGACTTTACGTCCATATGGTGAACCTCCCAAGAGTGATGTGCTGCAATTGCCAGCAGGAAACGAACGGATTCTAACCTTGCTACTGGCGCAAATACCTCTTCGAAATCCACTCCTTGCTTCTGGACGTAGCCCTTCGCCACCAGACGAGCCTTGTGCTTCACAACTTCTCCTTTTTCGTTGCGCTTCAGTTTGAAGACCCATTTGAGCCCTATGGCTCGGTGTCCCGGTGGCATATCCTCCAGACTCCACGTCTGGTTCTCAGTGATGGATGTCATCTCCTCCTGCATTGCCTTCCGCCAGCACGGGTTCTTTTCTGCTTCGGCGAAGGTGTTTGGTTCATCTGCACTGACGGCATGTAGTTCGGCCACTTCCTCGAGCTCGCGCGCTGCTAGTCCAGGTGGTTCACCTCCTCCCACTAGGTCATCCATCCTCCGGTACCTAGCCTCCAGATCAGTATCGTGATCGGCATCCAGCGTCGAATCCGCAGTCCGTGGTGTTGCGAATTCCACTGGTTCAGGTGGTGCACCTGCTGGCGGCGGTGACGTCTCCTGATGCTGGGCTCCTCCTTCTTCAGGCTCGGTGACGAGGTACTCCACCGTGAATTGATTTGGATTACGGTCTGTCTCGATCACGTCATTCCACTGCCAGAAGGTGCTTTCGTCGAAGACGACGTCGCGAGACACGTGAGCTCGCCCCCCCACAGGATCATAGAGTCTGTACGCCTTGCTCCCGGGTTCGTAGCCGATGAAGACGACCTTCAGCCCCCTGGGATCGAGCTTGGCGAGATGGGGACGTGTTACCTTCATGTATGCGACGCAGCCGAACACGCGAAAATGATGTACTGTTGGTTTTTTGTTGTACCAGGCTTCATATGGCGTCTTCCCGTCGAGGCTTCGGGTTGGTGACCGATTGAGGAGATAATCTCCCCAGAATCTCCCAGGCATCCCGGCCGTCACCAACAATGACCTCGCTGTCCCGACAATGGTCTGATTTCGGCGCTCTACCACTCCGTTCTGTTGGGGGGAGTAGGGCGCCGTTAGGTGCCGTTGTATGCCGATCTCGTCGCAGTACTTATTGAAACTTGCCGAGGTGAATTCTCCGCCTCGGTCTGTGCGCAGCACTCGCATCTTCTTCTCACATTCGGCCTCCGCTCGCGCTTTAATGCGCTTAACCGCCTCTGCCGCCTCACTTTTCGCTTGCAGCAGAGTCAGCCACATGAAGCGGCTTTTGTCATCGACTAACAGGAGGAAGAGACTCTTACCGCCTGGGGTCGCCGGCTTGATGGGCCCGCAAATATCGCCGTGTACAAGCTCCAATGGCTCATAGGCTCGGTAGGCTGTTCGAGACGGAAAGGGTGTGCGCCTCTGTTTGCCGATGAGGCACCCGTCGCACAGCTTGTTCACGCCTTTGATTTCTGGCAAGCCGTGCACCAACTCCTTCTTCTGTAGCTTTTCTAGGGCAGGAAAGTTTAAGTGTCCGTACCTTGCGTGCCACCTCCAAGATACCTCTTCGGTCTTGGCCGAGAGGCTAACGGGTTGGTCTATCTCTAACTCCAGGATGTAAAGACGGTTTGTGGTGCGCCTTGCCTGCGTGAGCAGCCGTCGTTGATTATCGCAGATTTTCAGTAGTCCGCGCTCGATGGAAATGAAGCAGCCTGTCTCATCGAGCTGACCCAGGCTCACAAGGTTAGCCTTGAGCCTCGGGATGAAGTAGACGTCGGTCAGCTTGCGATGCTCGCCTCCCTTACTGACGAACAGGATGGTGCCGCGCCCTTCGATCTCGACGACGGAGCCGTCGCCGAATTTCACCGTCCCACGGATCCCCGAGTCGAGCTCGGAGAACGCAGATCTAGCCCCGGTCATATGGTTTGTTGCCCCTGTGTCAAGGATCCATTGCTGGTGCTCGTGTTGCTCGTCCCTTTCGCCGATCTGAGCGCCCACTCGCTCCTCCTCCAGTTGAATTGGCTCCCCAGTTGGTGCCAGCTTTGCTACGCCCAACTGGAGCTCTTTCTTGGGTTCAACATCGTCGTCGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN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ATGGTGGAGAGGAAGGCGAAAATTGTGATTATTGGCGCCGGAATGGCGGGACTCACGGCGGCGAATAGGCTCTACACGGCGCCCGGTTCGGCGGATTTGTTCGATATCTCCGTCGTGGAGTTCATGGGCCAGAAAATAGAAATGGGTGCCACGTGGATCCACGGTATCCGCGGCAGCCCAATTCATGAAATCGCCGATCAAATCAACGCCCTTCATTCTGACCAGCCATGGGAGTTCATGAACGCCTGGTCCGCCCACTCTACTACCGTCGCAGAAGGTGGCGTCGAGATCTCGCCGGCCATCATCGACCCCGTTTCCTCTCTCTTCACGAACCTCATTGATTTCTCTCAGGGAAAAATCGCCGGCGACTCCGACTTTCTCCGGCAAGCAAAGTCCGACAAGCTCAGCATCGGAGCTTATCTCCGGCGAGGCCTTGATTCGTACTTGATTTCTAAAAATGGCGAAATCGAGTTCAACGAGTGTAAAGGATGGAACCAAAAATCCCTCGAGGAAGCTATTTTCGCCATGTATGAAAACATCCAAAGAACTTACACCTCCGCCGGAGAGCTCTCGACGGTGGATCTCGTTGCGGAAAGTGAGTACCAAGTGTTCCCCGGCGATGAAATCACCATCCCCAAAGGCTATTCGACCGTAATCCAATCAATCGCCTCTATTCTTCCCCCTGGTTTAGTCCAATTGAACAAAAATGTCACCAAAATCGAATGGCATCCCGAACCAGACGCCCGGAATGTTCCAACGCCGGTGAGAATCCATTTTTCCGACGGGTCCGACATATCCGCCGATCACGTAATCGTCACCGTTTCCCTCGTAGTCCTCAAGGCTGGAACGCAACAAGAATCCGAATTGAAGAGTATCAACAAATCTCCTTGCCTGAATTTCGTTTTCCACCGGCCGGATTCGGAATTTCGACGGAAAAAAATCCCATGGTGGATAAGAAAAACCAGTTTCCTCCGACCAATCTACCAAAATTCGTCAATATTATTGTCCTGGTTCGCCGGAGAAGAAGCTCTTCACCTGGGAAAACTCAACGAGGAAGAAGTCATCAATGGAGTTTCAACAACCATCAGTAACTTCCAAATTCCGAATTCAGAATCAGATTGCAATGACTGCGAAGCAAATTCGAAGGGGAGCGTTAAATTCAGTAAAGTATTGAAGAGCCAATGGGGCAGCGATCCTCTGTTTCAGGGTTCATACTCATACATTGCAGTGGGATCAAGCGGGGAAGATTTGGACGCCATGGCAGAGCCATTACCAAGAACAGAGGAATCTCCAAAAGCTCCATTACTTCAGATTCTGTTTGCAGGTGAAGCAACTCACAGAACCCATTATTCTACAACACATGGAGCTTATTTCAGTGGCCTTAGAGAGGCCATTAGGCTGCTTCACCATTACAATTGCATTTGA ATGGTGGAGAGGAAGGCGAAAATTGTGATTATTGGCGCCGGAATGGCGGGACTCACGGCGGCGAATAGGCTCTACACGGCGCCCGGTTCGGCGGATTTGTTCGATATCTCCGTCGTGGAGTTCATGGGCCAGAAAATAGAAATGGGTGCCACGTGGATCCACGGTATCCGCGGCAGCCCAATTCATGAAATCGCCGATCAAATCAACGCCCTTCATTCTGACCAGCCATGGGAGTTCATGAACGCCTGGTCCGCCCACTCTACTACCGTCGCAGAAGGTGGCGTCGAGATCTCGCCGGCCATCATCGACCCCGTTTCCTCTCTCTTCACGAACCTCATTGATTTCTCTCAGGGAAAAATCGCCGGCGACTCCGACTTTCTCCGGCAAGCAAAGTCCGACAAGCTCAGCATCGGAGCTTATCTCCGGCGAGGCCTTGATTCGTACTTGATTTCTAAAAATGGCGAAATCGAGTTCAACGAGTGTAAAGGATGGAACCAAAAATCCCTCGAGGAAGCTATTTTCGCCATGTATGAAAACATCCAAAGAACTTACACCTCCGCCGGAGAGCTCTCGACGGTGGATCTCGTTGCGGAAAGTGAGTACCAAGTGTTCCCCGGCGATGAAATCACCATCCCCAAAGGCTATTCGACCGTAATCCAATCAATCGCCTCTATTCTTCCCCCTGGTTTAGTCCAATTGAACAAAAATGTCACCAAAATCGAATGGCATCCCGAACCAGACGCCCGGAATGTTCCAACGCCGGTGAGAATCCATTTTTCCGACGGGTCCGACATATCCGCCGATCACGTAATCGTCACCGTTTCCCTCGTAGTCCTCAAGGCTGGAACGCAACAAGAATCCGAATTGAAGAGTATCAACAAATCTCCTTGCCTGAATTTCGTTTTCCACCGGCCGGATTCGGAATTTCGACGGAAAAAAATCCCATGGTGGATAAGAAAAACCAGTTTCCTCCGACCAATCTACCAAAATTCGTCAATATTATTGTCCTGGTTCGCCGGAGAAGAAGCTCTTCACCTGGGAAAACTCAACGAGGAAGAAGTCATCAATGGAGTTTCAACAACCATCAGTAACTTCCAAATTCCGAATTCAGAATCAGATTGCAATGACTGCGAAGCAAATTCGAAGGGGAGCGTTAAATTCAGTAAAGTATTGAAGAGCCAATGGGGCAGCGATCCTCTGTTTCAGGGTTCATACTCATACATTGCAGTGGGATCAAGCGGGGAAGATTTGGACGCCATGGCAGAGCCATTACCAAGAACAGAGGAATCTCCAAAAGCTCCATTACTTCAGATTCTGTTTGCAGGTGAAGCAACTCACAGAACCCATTATTCTACAACACATGGAGCTTATTTCAGTGGCCTTAGAGAGGCCATTAGGCTGCTTCACCATTACAATTGCATTTGA MVERKAKIVIIGAGMAGLTAANRLYTAPGSADLFDISVVEFMGQKIEMGATWIHGIRGSPIHEIADQINALHSDQPWEFMNAWSAHSTTVAEGGVEISPAIIDPVSSLFTNLIDFSQGKIAGDSDFLRQAKSDKLSIGAYLRRGLDSYLISKNGEIEFNECKGWNQKSLEEAIFAMYENIQRTYTSAGELSTVDLVAESEYQVFPGDEITIPKGYSTVIQSIASILPPGLVQLNKNVTKIEWHPEPDARNVPTPVRIHFSDGSDISADHVIVTVSLVVLKAGTQQESELKSINKSPCLNFVFHRPDSEFRRKKIPWWIRKTSFLRPIYQNSSILLSWFAGEEALHLGKLNEEEVINGVSTTISNFQIPNSESDCNDCEANSKGSVKFSKVLKSQWGSDPLFQGSYSYIAVGSSGEDLDAMAEPLPRTEESPKAPLLQILFAGEATHRTHYSTTHGAYFSGLREAIRLLHHYNCI Homology
BLAST of CmoCh12G013260 vs. ExPASy Swiss-Prot
Match: Q9SU79 (Probable polyamine oxidase 5 OS=Arabidopsis thaliana OX=3702 GN=PAO5 PE=1 SV=1) HSP 1 Score: 486.1 bits (1250), Expect = 4.5e-136 Identity = 274/539 (50.83%), Postives = 346/539 (64.19%), Query Frame = 0
BLAST of CmoCh12G013260 vs. ExPASy Swiss-Prot
Match: Q5NAI7 (Polyamine oxidase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=PAO1 PE=1 SV=1) HSP 1 Score: 320.9 bits (821), Expect = 2.5e-86 Identity = 201/541 (37.15%), Postives = 294/541 (54.34%), Query Frame = 0
BLAST of CmoCh12G013260 vs. ExPASy Swiss-Prot
Match: Q99K82 (Spermine oxidase OS=Mus musculus OX=10090 GN=Smox PE=1 SV=1) HSP 1 Score: 193.4 bits (490), Expect = 6.0e-48 Identity = 161/558 (28.85%), Postives = 246/558 (44.09%), Query Frame = 0
BLAST of CmoCh12G013260 vs. ExPASy Swiss-Prot
Match: Q865R1 (Peroxisomal N(1)-acetyl-spermine/spermidine oxidase OS=Bos taurus OX=9913 GN=PAOX PE=1 SV=3) HSP 1 Score: 193.0 bits (489), Expect = 7.9e-48 Identity = 158/527 (29.98%), Postives = 242/527 (45.92%), Query Frame = 0
BLAST of CmoCh12G013260 vs. ExPASy Swiss-Prot
Match: Q9NWM0 (Spermine oxidase OS=Homo sapiens OX=9606 GN=SMOX PE=1 SV=1) HSP 1 Score: 183.0 bits (463), Expect = 8.1e-45 Identity = 155/547 (28.34%), Postives = 239/547 (43.69%), Query Frame = 0
BLAST of CmoCh12G013260 vs. ExPASy TrEMBL
Match: A0A6J1G2I5 (probable polyamine oxidase 5 OS=Cucurbita moschata OX=3662 GN=LOC111450217 PE=4 SV=1) HSP 1 Score: 725.3 bits (1871), Expect = 1.6e-205 Identity = 375/535 (70.09%), Postives = 428/535 (80.00%), Query Frame = 0
BLAST of CmoCh12G013260 vs. ExPASy TrEMBL
Match: A0A6J1KFF8 (probable polyamine oxidase 5 OS=Cucurbita maxima OX=3661 GN=LOC111493815 PE=4 SV=1) HSP 1 Score: 721.8 bits (1862), Expect = 1.8e-204 Identity = 373/535 (69.72%), Postives = 425/535 (79.44%), Query Frame = 0
BLAST of CmoCh12G013260 vs. ExPASy TrEMBL
Match: A0A5A7UZX3 (Putative polyamine oxidase 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00930 PE=4 SV=1) HSP 1 Score: 709.1 bits (1829), Expect = 1.2e-200 Identity = 365/533 (68.48%), Postives = 412/533 (77.30%), Query Frame = 0
BLAST of CmoCh12G013260 vs. ExPASy TrEMBL
Match: A0A1S3CB61 (probable polyamine oxidase 5 OS=Cucumis melo OX=3656 GN=LOC103498503 PE=4 SV=1) HSP 1 Score: 709.1 bits (1829), Expect = 1.2e-200 Identity = 365/533 (68.48%), Postives = 412/533 (77.30%), Query Frame = 0
BLAST of CmoCh12G013260 vs. ExPASy TrEMBL
Match: A0A0A0LFR4 (Amino_oxidase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G000460 PE=4 SV=1) HSP 1 Score: 706.1 bits (1821), Expect = 1.0e-199 Identity = 361/534 (67.60%), Postives = 412/534 (77.15%), Query Frame = 0
BLAST of CmoCh12G013260 vs. TAIR 10
Match: AT4G29720.1 (polyamine oxidase 5 ) HSP 1 Score: 486.1 bits (1250), Expect = 3.2e-137 Identity = 274/539 (50.83%), Postives = 346/539 (64.19%), Query Frame = 0
BLAST of CmoCh12G013260 vs. TAIR 10
Match: AT4G16310.1 (LSD1-like 3 ) HSP 1 Score: 96.7 bits (239), Expect = 5.4e-20 Identity = 130/532 (24.44%), Postives = 210/532 (39.47%), Query Frame = 0
BLAST of CmoCh12G013260 vs. TAIR 10
Match: AT3G13682.1 (LSD1-like2 ) HSP 1 Score: 92.4 bits (228), Expect = 1.0e-18 Identity = 134/515 (26.02%), Postives = 211/515 (40.97%), Query Frame = 0
BLAST of CmoCh12G013260 vs. TAIR 10
Match: AT3G10390.1 (Flavin containing amine oxidoreductase family protein ) HSP 1 Score: 80.9 bits (198), Expect = 3.1e-15 Identity = 112/499 (22.44%), Postives = 194/499 (38.88%), Query Frame = 0
BLAST of CmoCh12G013260 vs. TAIR 10
Match: AT1G62830.1 (LSD1-like 1 ) HSP 1 Score: 72.8 bits (177), Expect = 8.4e-13 Identity = 37/80 (46.25%), Postives = 51/80 (63.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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