CmoCh12G012980 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh12G012980
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	ethylene-responsive transcription factor ERF037-like
Location	Cmo_Chr12: 11419240 .. 11419989 (+)
RNA-Seq Expression	CmoCh12G012980
Synteny	CmoCh12G012980

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCAACGCCACCGTGCCGGAGACCGACTTGGGTGGCGTAAATTCTTCGCCGTCGTCTTCGTCCTCCTCGTCTCGGCCCAAACAAGGCGGTACCCAATTGAAGCGCGGGCGAGAAAATAGCAGCAGCAGCAGCAACGACAACAATCGACACCCAATTTACCGCGGCGTCCGAATGAGGGTGTGGGGCAAATGGGTGTCGGAAATTCGAGAGCCAAAGAAGAAGAGTAGGATCTGGCTAGGCACTTTCGCGACGCCTGAAATGGCGGCGCGTGCTCATGACGTCGCCGCACTTACCATCAAAGGCAACTCGGCTATCCTCAATTTCCCTGAACTCGCCGCCTCATTCCCCCGCCCCGTCTCCTCCTCCCCCCGCGACGTTCAATTCGCAGCCGGCCTCGCCGCCTCAATGCAACTCCCCAACGTCGACCCTCCTCCACCCCCTCCGCCGTTATCTCCATCCTCTCAGTCGCCGTCGCCTCCGCTTTCATCGTCATCTGAGTTGGACGAGTCGACGCCGGAGGAACTGAGTGAAATCGTGAAGCTGCCGAGTTTGGGGACGAGTTACGAGGAATCGGGCGAGTTCGTGTGTGACGAGTGGCAGTATAGTTGTGGGCCATGGTATCAAAATCAAAGCAGAAGGGAAGAAGAAGAAGAAGAAGCTTATGAGTACTTTAGAGATCAAATGGTAATGGCGGAAACAGAGTGTGTGATTCCCGCTTCATTTCAACCTTTACCTTTCTCGTGGTAA

mRNA sequence

ATGGCCAACGCCACCGTGCCGGAGACCGACTTGGGTGGCGTAAATTCTTCGCCGTCGTCTTCGTCCTCCTCGTCTCGGCCCAAACAAGGCGGTACCCAATTGAAGCGCGGGCGAGAAAATAGCAGCAGCAGCAGCAACGACAACAATCGACACCCAATTTACCGCGGCGTCCGAATGAGGGTGTGGGGCAAATGGGTGTCGGAAATTCGAGAGCCAAAGAAGAAGAGTAGGATCTGGCTAGGCACTTTCGCGACGCCTGAAATGGCGGCGCGTGCTCATGACGTCGCCGCACTTACCATCAAAGGCAACTCGGCTATCCTCAATTTCCCTGAACTCGCCGCCTCATTCCCCCGCCCCGTCTCCTCCTCCCCCCGCGACGTTCAATTCGCAGCCGGCCTCGCCGCCTCAATGCAACTCCCCAACGTCGACCCTCCTCCACCCCCTCCGCCGTTATCTCCATCCTCTCAGTCGCCGTCGCCTCCGCTTTCATCGTCATCTGAGTTGGACGAGTCGACGCCGGAGGAACTGAGTGAAATCGTGAAGCTGCCGAGTTTGGGGACGAGTTACGAGGAATCGGGCGAGTTCGTGTGTGACGAGTGGCAGTATAGTTGTGGGCCATGGTATCAAAATCAAAGCAGAAGGGAAGAAGAAGAAGAAGAAGCTTATGAGTACTTTAGAGATCAAATGGTAATGGCGGAAACAGAGTGTGTGATTCCCGCTTCATTTCAACCTTTACCTTTCTCGTGGTAA

Coding sequence (CDS)

ATGGCCAACGCCACCGTGCCGGAGACCGACTTGGGTGGCGTAAATTCTTCGCCGTCGTCTTCGTCCTCCTCGTCTCGGCCCAAACAAGGCGGTACCCAATTGAAGCGCGGGCGAGAAAATAGCAGCAGCAGCAGCAACGACAACAATCGACACCCAATTTACCGCGGCGTCCGAATGAGGGTGTGGGGCAAATGGGTGTCGGAAATTCGAGAGCCAAAGAAGAAGAGTAGGATCTGGCTAGGCACTTTCGCGACGCCTGAAATGGCGGCGCGTGCTCATGACGTCGCCGCACTTACCATCAAAGGCAACTCGGCTATCCTCAATTTCCCTGAACTCGCCGCCTCATTCCCCCGCCCCGTCTCCTCCTCCCCCCGCGACGTTCAATTCGCAGCCGGCCTCGCCGCCTCAATGCAACTCCCCAACGTCGACCCTCCTCCACCCCCTCCGCCGTTATCTCCATCCTCTCAGTCGCCGTCGCCTCCGCTTTCATCGTCATCTGAGTTGGACGAGTCGACGCCGGAGGAACTGAGTGAAATCGTGAAGCTGCCGAGTTTGGGGACGAGTTACGAGGAATCGGGCGAGTTCGTGTGTGACGAGTGGCAGTATAGTTGTGGGCCATGGTATCAAAATCAAAGCAGAAGGGAAGAAGAAGAAGAAGAAGCTTATGAGTACTTTAGAGATCAAATGGTAATGGCGGAAACAGAGTGTGTGATTCCCGCTTCATTTCAACCTTTACCTTTCTCGTGGTAA

Protein sequence

MANATVPETDLGGVNSSPSSSSSSSRPKQGGTQLKRGRENSSSSSNDNNRHPIYRGVRMRVWGKWVSEIREPKKKSRIWLGTFATPEMAARAHDVAALTIKGNSAILNFPELAASFPRPVSSSPRDVQFAAGLAASMQLPNVDPPPPPPPLSPSSQSPSPPLSSSSELDESTPEELSEIVKLPSLGTSYEESGEFVCDEWQYSCGPWYQNQSRREEEEEEAYEYFRDQMVMAETECVIPASFQPLPFSW

Homology

[Close]

BLAST of CmoCh12G012980 vs. ExPASy Swiss-Prot
Match: O80654 (Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana OX=3702 GN=ERF037 PE=1 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 3.4e-42
Identity = 116/209 (55.50%), Postives = 131/209 (62.68%), Query Frame = 0


Query: 52  PIYRGVRMRVWGKWVSEIREPKKKSRIWLGTFATPEMAARAHDVAALTIKGNSAILNFPE 111
           P YRGVRMR WGKWVSEIREP+KKSRIWLGTF+TPEMAARAHD AALTIKG SA+LNFPE
Sbjct: 41  PGYRGVRMRTWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDAAALTIKGTSAVLNFPE 100

Query: 112 LAASFPRPVSSSPRDVQFAAGLAASMQL-----------PNVDPPPPPPPLSPSSQS--P 171
           LA   PRP SSSPRDVQ AA +AA+M             P     P    LS SS S   
Sbjct: 101 LATYLPRPASSSPRDVQAAAAVAAAMDFSPSSSSLVVSDPTTVIAPAETQLSSSSYSTCT 160

Query: 172 SPPLSSSSELDESTPEELSEIVKLPSLGTSYEES-GEFVCDEWQY-SCGPWYQNQSRREE 231
           S  LS SSE   ST EELSEIV+LPSL TSY+ES  EFV  +  Y    PWY N      
Sbjct: 161 SSSLSPSSEEAASTAEELSEIVELPSLETSYDESLSEFVYVDSAYPPSSPWYINNC---- 220

Query: 232 EEEEAYEYFRDQMVMAETECVIPASFQPL 246
               ++ Y  D+  ++  E    ++F PL
Sbjct: 221 ---YSFYYHSDENGISMAEPFDSSNFGPL 242

[Close]

BLAST of CmoCh12G012980 vs. ExPASy Swiss-Prot
Match: Q9LYD3 (Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=DREB3 PE=2 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 2.2e-41
Identity = 107/185 (57.84%), Postives = 123/185 (66.49%), Query Frame = 0


Query: 15  NSSPSSSSSSSRPKQGGTQLKRGRENSSSSSNDNNRHPIYRGVRMRVWGKWVSEIREPKK 74
           NS   S S  S+ +Q   + KRGR        D+ +HP+YRGVRMR WGKWVSEIREP+K
Sbjct: 20  NSESDSVSDKSKAEQSEKKTKRGR--------DSGKHPVYRGVRMRNWGKWVSEIREPRK 79

Query: 75  KSRIWLGTFATPEMAARAHDVAALTIKGNSAILNFPELAASFPRPVSSSPRDVQFAAGLA 134
           KSRIWLGTF TPEMAARAHDVAAL+IKG +AILNFPELA SFPRPVS SPRD+Q AA  A
Sbjct: 80  KSRIWLGTFPTPEMAARAHDVAALSIKGTAAILNFPELADSFPRPVSLSPRDIQTAALKA 139

Query: 135 ASMQLPNVDPPPPPPPLSPSSQSPSPPLSSSS---------ELDESTPEELSEIVKLPSL 191
           A M+         P     SS S S  LSS+S         +L  +  EEL EIV+LPSL
Sbjct: 140 AHME---------PTTSFSSSTSSSSSLSSTSSLESLVLVMDLSRTESEELGEIVELPSL 187

[Close]

BLAST of CmoCh12G012980 vs. ExPASy Swiss-Prot
Match: Q9LU18 (Ethylene-responsive transcription factor ERF036 OS=Arabidopsis thaliana OX=3702 GN=ERF036 PE=2 SV=2)

HSP 1 Score: 158.3 bits (399), Expect = 1.1e-37
Identity = 103/197 (52.28%), Postives = 134/197 (68.02%), Query Frame = 0


Query: 2   ANATVPETDLGGVNSSPSSS-SSSSRPKQGGTQLKRGRENSSSSSNDNNRHPIYRGVRMR 61
           A+ T   +D     ++ S+  S    P +     KR R++SS+SS+ + +HP+YRGVRMR
Sbjct: 8   ASPTSSSSDQSDATTTTSTHLSEEEAPPRNNNTRKRRRDSSSASSSSSMQHPVYRGVRMR 67

Query: 62  VWGKWVSEIREPKKKSRIWLGTFATPEMAARAHDVAALTIKGNSAILNFPELAASFPRPV 121
            WGKWVSEIR+P+KK+RIWLGTF T +MAARAHDVAALTIKG+SA+LNFPELA+ FPRP 
Sbjct: 68  SWGKWVSEIRQPRKKTRIWLGTFVTADMAARAHDVAALTIKGSSAVLNFPELASLFPRPA 127

Query: 122 SSSPRDVQFAAGLAASM----QLPNVDPPPPPPPLSPSSQSPSPPLSSSSELDESTPEEL 181
           SSSP D+Q AA  AA+M    +L   D  P  PP S SS      +++ SE DE   E L
Sbjct: 128 SSSPHDIQTAAAEAAAMVVEEKLLEKDEAPEAPPSSESSY-----VAAESE-DE---ERL 187

Query: 182 SEIVKLPSLGT-SYEES 193
            +IV+LP++   SY+ES
Sbjct: 188 EKIVELPNIEEGSYDES 195

[Close]

BLAST of CmoCh12G012980 vs. ExPASy Swiss-Prot
Match: Q9M080 (Ethylene-responsive transcription factor ERF043 OS=Arabidopsis thaliana OX=3702 GN=ERF043 PE=2 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 7.3e-37
Identity = 97/172 (56.40%), Postives = 113/172 (65.70%), Query Frame = 0


Query: 40  NSSSSSNDNNRHPIYRGVRMRVWGKWVSEIREPKKKSRIWLGTFATPEMAARAHDVAALT 99
           +S     +NN+ P+YRGVRMR WGKWVSEIREP+KKSRIWLGTF T EMA RAHDVAA++
Sbjct: 5   SSDKEKKENNKQPVYRGVRMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAMRAHDVAAMS 64

Query: 100 IKGNSAILNFPELAASFPRPVSSSPRDVQFAAGLAASMQL--------PNVDPPPPPPPL 159
           IKG SAILNFPEL+   PRPVS SPRDV+ AA  AA M                     +
Sbjct: 65  IKGTSAILNFPELSKLLPRPVSLSPRDVRAAATKAALMDFDTTAFRSDTETSETTTSNKM 124

Query: 160 SPSSQS------PSPPLSSSSELDEST-PEELSEIVKLPSLGTSYEESGEFV 197
           S SS+S       S   SS + ++EST  ++L EIVKLPSLGTS  ES EFV
Sbjct: 125 SESSESNETVSFSSSSWSSVTSIEESTVSDDLDEIVKLPSLGTSLNESNEFV 176

[Close]

BLAST of CmoCh12G012980 vs. ExPASy Swiss-Prot
Match: Q39127 (Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana OX=3702 GN=TINY PE=2 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 8.1e-36
Identity = 98/190 (51.58%), Postives = 118/190 (62.11%), Query Frame = 0


Query: 21  SSSSSRPKQGGTQLKRGRENSSSSSNDNNRHPIYRGVRMRVWGKWVSEIREPKKKSRIWL 80
           +S S++  +     +   E       D+ +HP+YRGVR R WGKWVSEIREP+KKSRIWL
Sbjct: 3   ASESTKSWEASAVRQENEEEKKKPVKDSGKHPVYRGVRKRNWGKWVSEIREPRKKSRIWL 62

Query: 81  GTFATPEMAARAHDVAALTIKGNSAILNFPELAASFPRPVSSSPRDVQFAAGLAASMQLP 140
           GTF +PEMAARAHDVAAL+IKG SAILNFP+LA SFPRP S SPRD+Q AA  AA M+  
Sbjct: 63  GTFPSPEMAARAHDVAALSIKGASAILNFPDLAGSFPRPSSLSPRDIQVAALKAAHME-- 122

Query: 141 NVDPPPPPPPLSPSSQSPSPPLSSSSELDESTPEELSEIVKLPSLGTSYEE----SGEFV 200
                     L+ SS   S  L S      +  EEL EIV+LPSLG+SY+       EF+
Sbjct: 123 TSQSFSSSSSLTFSSSQSSSSLESLVSSSATGSEELGEIVELPSLGSSYDGLTQLGNEFI 182

Query: 201 ----CDEWQY 203
                D W Y
Sbjct: 183 FSDSADLWPY 190

[Close]

BLAST of CmoCh12G012980 vs. ExPASy TrEMBL
Match: A0A6J1FG56 (dehydration-responsive element-binding protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111443880 PE=4 SV=1)

HSP 1 Score: 482.3 bits (1240), Expect = 1.3e-132
Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0


Query: 1   MANATVPETDLGGVNSSPSSSSSSSRPKQGGTQLKRGRENSSSSSNDNNRHPIYRGVRMR 60
           MANATVPETDLGGVNSSPSSSSSSSRPKQGGTQLKRGRENSSSSSNDNNRHPIYRGVRMR
Sbjct: 1   MANATVPETDLGGVNSSPSSSSSSSRPKQGGTQLKRGRENSSSSSNDNNRHPIYRGVRMR 60

Query: 61  VWGKWVSEIREPKKKSRIWLGTFATPEMAARAHDVAALTIKGNSAILNFPELAASFPRPV 120
           VWGKWVSEIREPKKKSRIWLGTFATPEMAARAHDVAALTIKGNSAILNFPELAASFPRPV
Sbjct: 61  VWGKWVSEIREPKKKSRIWLGTFATPEMAARAHDVAALTIKGNSAILNFPELAASFPRPV 120

Query: 121 SSSPRDVQFAAGLAASMQLPNVDPPPPPPPLSPSSQSPSPPLSSSSELDESTPEELSEIV 180
           SSSPRDVQFAAGLAASMQLPNVDPPPPPPPLSPSSQSPSPPLSSSSELDESTPEELSEIV
Sbjct: 121 SSSPRDVQFAAGLAASMQLPNVDPPPPPPPLSPSSQSPSPPLSSSSELDESTPEELSEIV 180

Query: 181 KLPSLGTSYEESGEFVCDEWQYSCGPWYQNQSRREEEEEEAYEYFRDQMVMAETECVIPA 240
           KLPSLGTSYEESGEFVCDEWQYSCGPWYQNQSRREEEEEEAYEYFRDQMVMAETECVIPA
Sbjct: 181 KLPSLGTSYEESGEFVCDEWQYSCGPWYQNQSRREEEEEEAYEYFRDQMVMAETECVIPA 240

Query: 241 SFQPLPFSW 250
           SFQPLPFSW
Sbjct: 241 SFQPLPFSW 249

[Close]

BLAST of CmoCh12G012980 vs. ExPASy TrEMBL
Match: A0A6J1HQA9 (ethylene-responsive transcription factor ERF037-like OS=Cucurbita maxima OX=3661 GN=LOC111465646 PE=4 SV=1)

HSP 1 Score: 464.5 bits (1194), Expect = 2.7e-127
Identity = 243/250 (97.20%), Postives = 245/250 (98.00%), Query Frame = 0


Query: 1   MANATVPETDLGGVNSSPSSSSSSSRPKQGGTQLKRGRE-NSSSSSNDNNRHPIYRGVRM 60
           MANATVPETDLGGVNSSPSSSSSSSR KQGGTQLKR RE N+SSSSN+NNRHPIYRGVRM
Sbjct: 1   MANATVPETDLGGVNSSPSSSSSSSRAKQGGTQLKRRRENNNSSSSNNNNRHPIYRGVRM 60

Query: 61  RVWGKWVSEIREPKKKSRIWLGTFATPEMAARAHDVAALTIKGNSAILNFPELAASFPRP 120
           RVWGKWVSEIREPKKKSRIWLGTFATPEMAARAHDVAALTIKGNSAILNFPELAASFPRP
Sbjct: 61  RVWGKWVSEIREPKKKSRIWLGTFATPEMAARAHDVAALTIKGNSAILNFPELAASFPRP 120

Query: 121 VSSSPRDVQFAAGLAASMQLPNVDPPPPPPPLSPSSQSPSPPLSSSSELDESTPEELSEI 180
           VSSSPRDVQFAAGLAASMQLPNVDPPPPPPPLSPSSQSPSPPLSSSSELDESTPEELSEI
Sbjct: 121 VSSSPRDVQFAAGLAASMQLPNVDPPPPPPPLSPSSQSPSPPLSSSSELDESTPEELSEI 180

Query: 181 VKLPSLGTSYEESGEFVCDEWQYSCGPWYQNQSRREEEEEEAYEYFRDQMVMAETECVIP 240
           VKLPSLGTSYEESGEFVCDEWQY CGPWYQNQSRREEEEEEAYEYFRDQM MAETECVIP
Sbjct: 181 VKLPSLGTSYEESGEFVCDEWQYICGPWYQNQSRREEEEEEAYEYFRDQMAMAETECVIP 240

Query: 241 ASFQPLPFSW 250
           ASFQPLPFSW
Sbjct: 241 ASFQPLPFSW 250

[Close]

BLAST of CmoCh12G012980 vs. ExPASy TrEMBL
Match: A0A5D3CFH4 (Dehydration-responsive element-binding protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00480 PE=4 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 6.3e-84
Identity = 192/261 (73.56%), Postives = 203/261 (77.78%), Query Frame = 0


Query: 1   MANATVPETDLGGVNSSPSSSSS-----SSRPKQ--GGTQLKRGRENSSSSSNDNNRHPI 60
           MANATVP+TD GG NSS SSSSS     SS  KQ  G  + KRGRE     S++N+ HP 
Sbjct: 1   MANATVPDTDSGGANSSSSSSSSTSGSISSPSKQAIGDRRPKRGRE-----SSNNSAHPS 60

Query: 61  YRGVRMRVWGKWVSEIREPKKKSRIWLGTFATPEMAARAHDVAALTIKGNSAILNFPELA 120
           YRGVRMR WGKWVSEIREPKKKSRIWLGTFATP+MAARAHDVAALTIKGNSAILNFPELA
Sbjct: 61  YRGVRMRAWGKWVSEIREPKKKSRIWLGTFATPDMAARAHDVAALTIKGNSAILNFPELA 120

Query: 121 ASFPRPVSSSPRDVQFAAGLAASMQLPNVDPPPPPPPLSPSSQSPSPPLSSSSELDESTP 180
           ASFPRP SSSPRDVQ AA LAASMQLP+V   PPPPP SP S   SPP SSSSELD+STP
Sbjct: 121 ASFPRPASSSPRDVQSAAALAASMQLPDVMISPPPPPPSPPS---SPPCSSSSELDQSTP 180

Query: 181 EELSEIVKLPSLGTSYEESG----EFVCDEWQYSCGPWYQNQSRREEEEEEAYEYFRDQM 240
           EELSEIV LPSLGT Y+ES     EFV DEWQYS GPW Q +    +EEEE YEYF DQ 
Sbjct: 181 EELSEIVVLPSLGTGYDESAESVTEFVFDEWQYSYGPWDQ-EKESSKEEEEGYEYFIDQT 240

Query: 241 VMAETECVIP-ASFQPLPFSW 250
            MAE ECVIP A FQPL FSW
Sbjct: 241 AMAERECVIPTALFQPLSFSW 252

[Close]

BLAST of CmoCh12G012980 vs. ExPASy TrEMBL
Match: A0A1S3C7X6 (dehydration-responsive element-binding protein 3-like OS=Cucumis melo OX=3656 GN=LOC103497991 PE=4 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 6.3e-84
Identity = 192/261 (73.56%), Postives = 203/261 (77.78%), Query Frame = 0


Query: 1   MANATVPETDLGGVNSSPSSSSS-----SSRPKQ--GGTQLKRGRENSSSSSNDNNRHPI 60
           MANATVP+TD GG NSS SSSSS     SS  KQ  G  + KRGRE     S++N+ HP 
Sbjct: 1   MANATVPDTDSGGANSSSSSSSSTSGSISSPSKQAIGDRRPKRGRE-----SSNNSAHPS 60

Query: 61  YRGVRMRVWGKWVSEIREPKKKSRIWLGTFATPEMAARAHDVAALTIKGNSAILNFPELA 120
           YRGVRMR WGKWVSEIREPKKKSRIWLGTFATP+MAARAHDVAALTIKGNSAILNFPELA
Sbjct: 61  YRGVRMRAWGKWVSEIREPKKKSRIWLGTFATPDMAARAHDVAALTIKGNSAILNFPELA 120

Query: 121 ASFPRPVSSSPRDVQFAAGLAASMQLPNVDPPPPPPPLSPSSQSPSPPLSSSSELDESTP 180
           ASFPRP SSSPRDVQ AA LAASMQLP+V   PPPPP SP S   SPP SSSSELD+STP
Sbjct: 121 ASFPRPASSSPRDVQSAAALAASMQLPDVMISPPPPPPSPPS---SPPCSSSSELDQSTP 180

Query: 181 EELSEIVKLPSLGTSYEESG----EFVCDEWQYSCGPWYQNQSRREEEEEEAYEYFRDQM 240
           EELSEIV LPSLGT Y+ES     EFV DEWQYS GPW Q +    +EEEE YEYF DQ 
Sbjct: 181 EELSEIVVLPSLGTGYDESAESVTEFVFDEWQYSYGPWDQ-EKESSKEEEEGYEYFIDQT 240

Query: 241 VMAETECVIP-ASFQPLPFSW 250
            MAE ECVIP A FQPL FSW
Sbjct: 241 AMAERECVIPTALFQPLSFSW 252

[Close]

BLAST of CmoCh12G012980 vs. ExPASy TrEMBL
Match: A0A6J1KHB4 (ethylene-responsive transcription factor ERF039-like OS=Cucurbita maxima OX=3661 GN=LOC111493859 PE=4 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 1.0e-81
Identity = 191/262 (72.90%), Postives = 202/262 (77.10%), Query Frame = 0


Query: 1   MANATVPETDLGGVNSSPSSSSSS-------SRP--KQGGTQLKRGRENSSSSSNDNNRH 60
           M+NATVPE+D GG NSS S+SSSS       S P  K GG + KR RE S+     N+RH
Sbjct: 1   MSNATVPESDSGGSNSSSSTSSSSFSTSCSISSPTKKAGGCRPKRAREIST-----NSRH 60

Query: 61  PIYRGVRMRVWGKWVSEIREPKKKSRIWLGTFATPEMAARAHDVAALTIKGNSAILNFPE 120
           PIYRGVRMR WGKWVSEIREPKKKSRIWLGTFATP+MAARAHDVAALTIKGNSAILNFPE
Sbjct: 61  PIYRGVRMRAWGKWVSEIREPKKKSRIWLGTFATPDMAARAHDVAALTIKGNSAILNFPE 120

Query: 121 LAASFPRPVSSSPRDVQFAAGLAASMQLPNVDPPPPPPPLSPSSQSPSPPLSSSSELDES 180
           LAAS PRP SSSPRDVQ AA LAASMQLPN   PPPPPPL P S   SPP +SSSEL+ES
Sbjct: 121 LAASLPRPASSSPRDVQSAAALAASMQLPNA--PPPPPPLPPPS---SPPFTSSSELEES 180

Query: 181 TPEELSEIVKLPSLGTSYEESG----EFVCDEWQYSCGPWYQNQSRREEEEEEAYEYFRD 240
           TPEELSEIV LPSLGTSYEES     E V DEWQYS G W QNQS + EEEEEAYE+F D
Sbjct: 181 TPEELSEIVVLPSLGTSYEESSESVTELVFDEWQYSYGLWDQNQSSK-EEEEEAYEFFID 240

Query: 241 QMVMAETECVIPASFQPLPFSW 250
           QM MAE       SFQ LPFSW
Sbjct: 241 QMAMAE------KSFQALPFSW 245

[Close]

BLAST of CmoCh12G012980 vs. TAIR 10
Match: AT1G77200.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 173.3 bits (438), Expect = 2.4e-43
Identity = 116/209 (55.50%), Postives = 131/209 (62.68%), Query Frame = 0


Query: 52  PIYRGVRMRVWGKWVSEIREPKKKSRIWLGTFATPEMAARAHDVAALTIKGNSAILNFPE 111
           P YRGVRMR WGKWVSEIREP+KKSRIWLGTF+TPEMAARAHD AALTIKG SA+LNFPE
Sbjct: 41  PGYRGVRMRTWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDAAALTIKGTSAVLNFPE 100

Query: 112 LAASFPRPVSSSPRDVQFAAGLAASMQL-----------PNVDPPPPPPPLSPSSQS--P 171
           LA   PRP SSSPRDVQ AA +AA+M             P     P    LS SS S   
Sbjct: 101 LATYLPRPASSSPRDVQAAAAVAAAMDFSPSSSSLVVSDPTTVIAPAETQLSSSSYSTCT 160

Query: 172 SPPLSSSSELDESTPEELSEIVKLPSLGTSYEES-GEFVCDEWQY-SCGPWYQNQSRREE 231
           S  LS SSE   ST EELSEIV+LPSL TSY+ES  EFV  +  Y    PWY N      
Sbjct: 161 SSSLSPSSEEAASTAEELSEIVELPSLETSYDESLSEFVYVDSAYPPSSPWYINNC---- 220

Query: 232 EEEEAYEYFRDQMVMAETECVIPASFQPL 246
               ++ Y  D+  ++  E    ++F PL
Sbjct: 221 ---YSFYYHSDENGISMAEPFDSSNFGPL 242

[Close]

BLAST of CmoCh12G012980 vs. TAIR 10
Match: AT5G11590.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 170.6 bits (431), Expect = 1.6e-42
Identity = 107/185 (57.84%), Postives = 123/185 (66.49%), Query Frame = 0


Query: 15  NSSPSSSSSSSRPKQGGTQLKRGRENSSSSSNDNNRHPIYRGVRMRVWGKWVSEIREPKK 74
           NS   S S  S+ +Q   + KRGR        D+ +HP+YRGVRMR WGKWVSEIREP+K
Sbjct: 20  NSESDSVSDKSKAEQSEKKTKRGR--------DSGKHPVYRGVRMRNWGKWVSEIREPRK 79

Query: 75  KSRIWLGTFATPEMAARAHDVAALTIKGNSAILNFPELAASFPRPVSSSPRDVQFAAGLA 134
           KSRIWLGTF TPEMAARAHDVAAL+IKG +AILNFPELA SFPRPVS SPRD+Q AA  A
Sbjct: 80  KSRIWLGTFPTPEMAARAHDVAALSIKGTAAILNFPELADSFPRPVSLSPRDIQTAALKA 139

Query: 135 ASMQLPNVDPPPPPPPLSPSSQSPSPPLSSSS---------ELDESTPEELSEIVKLPSL 191
           A M+         P     SS S S  LSS+S         +L  +  EEL EIV+LPSL
Sbjct: 140 AHME---------PTTSFSSSTSSSSSLSSTSSLESLVLVMDLSRTESEELGEIVELPSL 187

[Close]

BLAST of CmoCh12G012980 vs. TAIR 10
Match: AT3G16280.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 158.3 bits (399), Expect = 8.0e-39
Identity = 103/197 (52.28%), Postives = 134/197 (68.02%), Query Frame = 0


Query: 2   ANATVPETDLGGVNSSPSSS-SSSSRPKQGGTQLKRGRENSSSSSNDNNRHPIYRGVRMR 61
           A+ T   +D     ++ S+  S    P +     KR R++SS+SS+ + +HP+YRGVRMR
Sbjct: 8   ASPTSSSSDQSDATTTTSTHLSEEEAPPRNNNTRKRRRDSSSASSSSSMQHPVYRGVRMR 67

Query: 62  VWGKWVSEIREPKKKSRIWLGTFATPEMAARAHDVAALTIKGNSAILNFPELAASFPRPV 121
            WGKWVSEIR+P+KK+RIWLGTF T +MAARAHDVAALTIKG+SA+LNFPELA+ FPRP 
Sbjct: 68  SWGKWVSEIRQPRKKTRIWLGTFVTADMAARAHDVAALTIKGSSAVLNFPELASLFPRPA 127

Query: 122 SSSPRDVQFAAGLAASM----QLPNVDPPPPPPPLSPSSQSPSPPLSSSSELDESTPEEL 181
           SSSP D+Q AA  AA+M    +L   D  P  PP S SS      +++ SE DE   E L
Sbjct: 128 SSSPHDIQTAAAEAAAMVVEEKLLEKDEAPEAPPSSESSY-----VAAESE-DE---ERL 187

Query: 182 SEIVKLPSLGT-SYEES 193
            +IV+LP++   SY+ES
Sbjct: 188 EKIVELPNIEEGSYDES 195

[Close]

BLAST of CmoCh12G012980 vs. TAIR 10
Match: AT4G32800.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 155.6 bits (392), Expect = 5.2e-38
Identity = 97/172 (56.40%), Postives = 113/172 (65.70%), Query Frame = 0


Query: 40  NSSSSSNDNNRHPIYRGVRMRVWGKWVSEIREPKKKSRIWLGTFATPEMAARAHDVAALT 99
           +S     +NN+ P+YRGVRMR WGKWVSEIREP+KKSRIWLGTF T EMA RAHDVAA++
Sbjct: 5   SSDKEKKENNKQPVYRGVRMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAMRAHDVAAMS 64

Query: 100 IKGNSAILNFPELAASFPRPVSSSPRDVQFAAGLAASMQL--------PNVDPPPPPPPL 159
           IKG SAILNFPEL+   PRPVS SPRDV+ AA  AA M                     +
Sbjct: 65  IKGTSAILNFPELSKLLPRPVSLSPRDVRAAATKAALMDFDTTAFRSDTETSETTTSNKM 124

Query: 160 SPSSQS------PSPPLSSSSELDEST-PEELSEIVKLPSLGTSYEESGEFV 197
           S SS+S       S   SS + ++EST  ++L EIVKLPSLGTS  ES EFV
Sbjct: 125 SESSESNETVSFSSSSWSSVTSIEESTVSDDLDEIVKLPSLGTSLNESNEFV 176

[Close]

BLAST of CmoCh12G012980 vs. TAIR 10
Match: AT5G25810.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 152.1 bits (383), Expect = 5.7e-37
Identity = 98/190 (51.58%), Postives = 118/190 (62.11%), Query Frame = 0


Query: 21  SSSSSRPKQGGTQLKRGRENSSSSSNDNNRHPIYRGVRMRVWGKWVSEIREPKKKSRIWL 80
           +S S++  +     +   E       D+ +HP+YRGVR R WGKWVSEIREP+KKSRIWL
Sbjct: 3   ASESTKSWEASAVRQENEEEKKKPVKDSGKHPVYRGVRKRNWGKWVSEIREPRKKSRIWL 62

Query: 81  GTFATPEMAARAHDVAALTIKGNSAILNFPELAASFPRPVSSSPRDVQFAAGLAASMQLP 140
           GTF +PEMAARAHDVAAL+IKG SAILNFP+LA SFPRP S SPRD+Q AA  AA M+  
Sbjct: 63  GTFPSPEMAARAHDVAALSIKGASAILNFPDLAGSFPRPSSLSPRDIQVAALKAAHME-- 122

Query: 141 NVDPPPPPPPLSPSSQSPSPPLSSSSELDESTPEELSEIVKLPSLGTSYEE----SGEFV 200
                     L+ SS   S  L S      +  EEL EIV+LPSLG+SY+       EF+
Sbjct: 123 TSQSFSSSSSLTFSSSQSSSSLESLVSSSATGSEELGEIVELPSLGSSYDGLTQLGNEFI 182

Query: 201 ----CDEWQY 203
                D W Y
Sbjct: 183 FSDSADLWPY 190

The following BLAST results are available for this feature:

BLAST of CmoCh12G012980 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80654	3.4e-42	55.50	Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9LYD3	2.2e-41	57.84	Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana OX=3702...	[more]
Q9LU18	1.1e-37	52.28	Ethylene-responsive transcription factor ERF036 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9M080	7.3e-37	56.40	Ethylene-responsive transcription factor ERF043 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q39127	8.1e-36	51.58	Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of CmoCh12G012980 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FG56	1.3e-132	100.00	dehydration-responsive element-binding protein 3-like OS=Cucurbita moschata OX=3...	[more]
A0A6J1HQA9	2.7e-127	97.20	ethylene-responsive transcription factor ERF037-like OS=Cucurbita maxima OX=3661...	[more]
A0A5D3CFH4	6.3e-84	73.56	Dehydration-responsive element-binding protein 3-like OS=Cucumis melo var. makuw...	[more]
A0A1S3C7X6	6.3e-84	73.56	dehydration-responsive element-binding protein 3-like OS=Cucumis melo OX=3656 GN...	[more]
A0A6J1KHB4	1.0e-81	72.90	ethylene-responsive transcription factor ERF039-like OS=Cucurbita maxima OX=3661...	[more]

BLAST of CmoCh12G012980 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G77200.1	2.4e-43	55.50	Integrase-type DNA-binding superfamily protein	[more]
AT5G11590.1	1.6e-42	57.84	Integrase-type DNA-binding superfamily protein	[more]
AT3G16280.1	8.0e-39	52.28	Integrase-type DNA-binding superfamily protein	[more]
AT4G32800.1	5.2e-38	56.40	Integrase-type DNA-binding superfamily protein	[more]
AT5G25810.1	5.7e-37	51.58	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 54..65 score: 70.3 coord: 76..92 score: 66.42
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 53..116 e-value: 2.7E-36 score: 136.6
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 52..102 e-value: 4.3E-13 score: 49.3
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 53..110 score: 22.68173
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 52..112 e-value: 6.76599E-31 score: 107.357
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 53..111 e-value: 5.8E-24 score: 86.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 140..157
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 137..176
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..52
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..51
None	No IPR available	PANTHER	PTHR31985:SF177	DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 3-LIKE	coord: 17..233
None	No IPR available	PANTHER	PTHR31985	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED	coord: 17..233
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 53..111

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh12G012980.1	CmoCh12G012980.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity