CmoCh12G012500 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh12G012500
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
Descriptionzinc finger Ran-binding domain-containing protein 2-like
LocationCmo_Chr12: 11086034 .. 11087046 (+)
RNA-Seq ExpressionCmoCh12G012500
SyntenyCmoCh12G012500
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGTTTCCAAATTCAGACTTCCAAGGTCATTTCTTCTCTCACTTTCTTTTTCGTTTCTATACGTTCTAAGCTTAGATTGATGTGTTACGATGAATTTAATTGTCTCGACGATACTCGAGTATTCCCGTCACTTACCTAACAAATGGGCAGAGACTCGAACATGCTGTTATTGATTCTGAATATTCGTTTCGTGATTGTAGGACGACGATGAACATGAACTGGTCAGGAGGAGACTGGATGTGTGGTGTGTGTGAACATGTGAACTTCAAAAAGAGGGAAGCTTGTCAACGATGTGGGTACCCGAAATACGGTGGTCCAGACCCATCAACGTACGAGTTTAACAAAACAGAAGTGTTAGCAGGAGATTGGTATTGTCATTGTGGAGCTCACAACTATGCCAGTCGATCAAGTTGTTACAGATGTAATGCATATAAGAGTGCTGATATTTGTGCTTTGCCCGGTTGGAAATCTGGAGATTGGATCTGTAATAGGTAAGAGCTGGTTTTGTCTGATACCCATTTTTAGTTTTTTCATAATATTGATTGGACATACGTTGAACTTATGCAGAATAGGATGCGAAACACACAATTATGCTAGTAGGATGGAATGCTATAAATGCAAAACTCCGAGGAATTTCGGTAAGAAAAGATCAAACTTTTAAGCTTACCCACGTGGAGATTCCAACCCATTAACCTTTTGATCGAGATTATATGTCTTAACGACGTTTTTTTTTCTCATTTGGGCAGGTGGAGCGGTTTGAATTTTTGAAGAACTCTTAGTGGAGCTATTATTTGGCCAACATACAAGCTTCTAGCATCTGATTCCCTCCAATTTGCTTCTTTTTTTCCACTTTCTTTCATGAAAAAGCTAAAAAAATTCTGTTTCTTAATCTCAATTTAGAGCTAATTAATTAGAATTATCTCTACATCGTTCAACTATTGAGTTTGAAGGTCGTATTCATGGGCCACGAACCAAGAACTTTGAATTAGATTCAAGAATCTACTTCTAAATAAT

mRNA sequence

AGTTTCCAAATTCAGACTTCCAAGGACGACGATGAACATGAACTGGTCAGGAGGAGACTGGATGTGTGGTGTGTGTGAACATGTGAACTTCAAAAAGAGGGAAGCTTGTCAACGATGTGGGTACCCGAAATACGGTGGTCCAGACCCATCAACGTACGAGTTTAACAAAACAGAAGTGTTAGCAGGAGATTGGTATTGTCATTGTGGAGCTCACAACTATGCCAGTCGATCAAGTTGTTACAGATGTAATGCATATAAGAGTGCTGATATTTGTGCTTTGCCCGGTTGGAAATCTGGAGATTGGATCTGTAATAGAATAGGATGCGAAACACACAATTATGCTAGTAGGATGGAATGCTATAAATGCAAAACTCCGAGGAATTTCGGTGGAGCGGTTTGAATTTTTGAAGAACTCTTAGTGGAGCTATTATTTGGCCAACATACAAGCTTCTAGCATCTGATTCCCTCCAATTTGCTTCTTTTTTTCCACTTTCTTTCATGAAAAAGCTAAAAAAATTCTGTTTCTTAATCTCAATTTAGAGCTAATTAATTAGAATTATCTCTACATCGTTCAACTATTGAGTTTGAAGGTCGTATTCATGGGCCACGAACCAAGAACTTTGAATTAGATTCAAGAATCTACTTCTAAATAAT

Coding sequence (CDS)

ATGAACATGAACTGGTCAGGAGGAGACTGGATGTGTGGTGTGTGTGAACATGTGAACTTCAAAAAGAGGGAAGCTTGTCAACGATGTGGGTACCCGAAATACGGTGGTCCAGACCCATCAACGTACGAGTTTAACAAAACAGAAGTGTTAGCAGGAGATTGGTATTGTCATTGTGGAGCTCACAACTATGCCAGTCGATCAAGTTGTTACAGATGTAATGCATATAAGAGTGCTGATATTTGTGCTTTGCCCGGTTGGAAATCTGGAGATTGGATCTGTAATAGAATAGGATGCGAAACACACAATTATGCTAGTAGGATGGAATGCTATAAATGCAAAACTCCGAGGAATTTCGGTGGAGCGGTTTGA

Protein sequence

MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPSTYEFNKTEVLAGDWYCHCGAHNYASRSSCYRCNAYKSADICALPGWKSGDWICNRIGCETHNYASRMECYKCKTPRNFGGAV
Homology
BLAST of CmoCh12G012500 vs. ExPASy Swiss-Prot
Match: Q5ZLX5 (Zinc finger Ran-binding domain-containing protein 2 OS=Gallus gallus OX=9031 GN=ZRANB2 PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.3e-07
Identity = 37/101 (36.63%), Postives = 46/101 (45.54%), Query Frame = 0

Query: 2   NMNWSGGDWMC--GVCEHVNFKKREACQRCG--------YPKYGGPDPSTYEFNKTEVL- 61
           N   S GDW+C    C +VNF +R +C RCG          K GG +       K+  L 
Sbjct: 5   NFRVSDGDWICPDKKCGNVNFARRTSCNRCGREKTTEAKMMKAGGTEIGKTLAEKSRGLF 64

Query: 62  -AGDWYCH-CGAHNYASRSSCYRCNAYKSADICALPGWKSG 90
            A DW C  CG  N+A RS C  CN  K A +    G+  G
Sbjct: 65  SANDWQCKTCGNVNWARRSECNMCNTPKYAKLEERTGYGGG 105

BLAST of CmoCh12G012500 vs. ExPASy Swiss-Prot
Match: O95218 (Zinc finger Ran-binding domain-containing protein 2 OS=Homo sapiens OX=9606 GN=ZRANB2 PE=1 SV=2)

HSP 1 Score: 55.1 bits (131), Expect = 6.6e-07
Identity = 36/101 (35.64%), Postives = 45/101 (44.55%), Query Frame = 0

Query: 2   NMNWSGGDWMC--GVCEHVNFKKREACQRCG--------YPKYGGPDPSTYEFNKTEVL- 61
           N   S GDW+C    C +VNF +R +C RCG          K GG +       K+  L 
Sbjct: 5   NFRVSDGDWICPDKKCGNVNFARRTSCNRCGREKTTEAKMMKAGGTEIGKTLAEKSRGLF 64

Query: 62  -AGDWYCH-CGAHNYASRSSCYRCNAYKSADICALPGWKSG 90
            A DW C  C   N+A RS C  CN  K A +    G+  G
Sbjct: 65  SANDWQCKTCSNVNWARRSECNMCNTPKYAKLEERTGYGGG 105

BLAST of CmoCh12G012500 vs. ExPASy Swiss-Prot
Match: Q9R020 (Zinc finger Ran-binding domain-containing protein 2 OS=Mus musculus OX=10090 GN=Zranb2 PE=1 SV=2)

HSP 1 Score: 55.1 bits (131), Expect = 6.6e-07
Identity = 36/101 (35.64%), Postives = 45/101 (44.55%), Query Frame = 0

Query: 2   NMNWSGGDWMC--GVCEHVNFKKREACQRCG--------YPKYGGPDPSTYEFNKTEVL- 61
           N   S GDW+C    C +VNF +R +C RCG          K GG +       K+  L 
Sbjct: 5   NFRVSDGDWICPDKKCGNVNFARRTSCNRCGREKTTEAKMMKAGGTEIGKTLAEKSRGLF 64

Query: 62  -AGDWYCH-CGAHNYASRSSCYRCNAYKSADICALPGWKSG 90
            A DW C  C   N+A RS C  CN  K A +    G+  G
Sbjct: 65  SANDWQCKTCSNVNWARRSECNMCNTPKYAKLEERTGYGGG 105

BLAST of CmoCh12G012500 vs. ExPASy Swiss-Prot
Match: Q19QU3 (Zinc finger Ran-binding domain-containing protein 2 OS=Sus scrofa OX=9823 GN=ZRANB2 PE=2 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 6.6e-07
Identity = 36/101 (35.64%), Postives = 45/101 (44.55%), Query Frame = 0

Query: 2   NMNWSGGDWMC--GVCEHVNFKKREACQRCG--------YPKYGGPDPSTYEFNKTEVL- 61
           N   S GDW+C    C +VNF +R +C RCG          K GG +       K+  L 
Sbjct: 5   NFRVSDGDWICPDKKCGNVNFARRTSCNRCGREKTTEAKMMKAGGTEIGKTLAEKSRGLF 64

Query: 62  -AGDWYCH-CGAHNYASRSSCYRCNAYKSADICALPGWKSG 90
            A DW C  C   N+A RS C  CN  K A +    G+  G
Sbjct: 65  SANDWQCKTCSNVNWARRSECNMCNTPKYAKLEERTGYGGG 105

BLAST of CmoCh12G012500 vs. ExPASy Swiss-Prot
Match: Q5R580 (Zinc finger Ran-binding domain-containing protein 2 OS=Pongo abelii OX=9601 GN=ZRANB2 PE=2 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 6.6e-07
Identity = 36/101 (35.64%), Postives = 45/101 (44.55%), Query Frame = 0

Query: 2   NMNWSGGDWMC--GVCEHVNFKKREACQRCG--------YPKYGGPDPSTYEFNKTEVL- 61
           N   S GDW+C    C +VNF +R +C RCG          K GG +       K+  L 
Sbjct: 5   NFRVSDGDWICPDKKCGNVNFARRTSCNRCGREKTTEAKMMKAGGTEIGKTLAEKSRGLF 64

Query: 62  -AGDWYCH-CGAHNYASRSSCYRCNAYKSADICALPGWKSG 90
            A DW C  C   N+A RS C  CN  K A +    G+  G
Sbjct: 65  SANDWQCKTCSNVNWARRSECNMCNTPKYAKLEERTGYGGG 105

BLAST of CmoCh12G012500 vs. ExPASy TrEMBL
Match: A0A6J1FCS1 (zinc finger Ran-binding domain-containing protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111444219 PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 2.0e-75
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0

Query: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPSTYEFNKTEVLAGDWYCHCGA 60
           MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPSTYEFNKTEVLAGDWYCHCGA
Sbjct: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPSTYEFNKTEVLAGDWYCHCGA 60

Query: 61  HNYASRSSCYRCNAYKSADICALPGWKSGDWICNRIGCETHNYASRMECYKCKTPRNFGG 120
           HNYASRSSCYRCNAYKSADICALPGWKSGDWICNRIGCETHNYASRMECYKCKTPRNFGG
Sbjct: 61  HNYASRSSCYRCNAYKSADICALPGWKSGDWICNRIGCETHNYASRMECYKCKTPRNFGG 120

Query: 121 AV 123
           AV
Sbjct: 121 AV 122

BLAST of CmoCh12G012500 vs. ExPASy TrEMBL
Match: A0A6J1HSH3 (zinc finger Ran-binding domain-containing protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111465727 PE=4 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 4.2e-73
Identity = 119/122 (97.54%), Postives = 121/122 (99.18%), Query Frame = 0

Query: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPSTYEFNKTEVLAGDWYCHCGA 60
           MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDP+TYEFNKTEVLAGDWYCHCGA
Sbjct: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEFNKTEVLAGDWYCHCGA 60

Query: 61  HNYASRSSCYRCNAYKSADICALPGWKSGDWICNRIGCETHNYASRMECYKCKTPRNFGG 120
           HNYASRSSCYRCNAYKSADI ALPGWKSGDWICNRIGCETHNYASRMECYKCKTPR+FGG
Sbjct: 61  HNYASRSSCYRCNAYKSADIGALPGWKSGDWICNRIGCETHNYASRMECYKCKTPRDFGG 120

Query: 121 AV 123
           AV
Sbjct: 121 AV 122

BLAST of CmoCh12G012500 vs. ExPASy TrEMBL
Match: A0A1S3C6B6 (uncharacterized RNA-binding protein C17H9.04c OS=Cucumis melo OX=3656 GN=LOC103497392 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 1.6e-64
Identity = 112/131 (85.50%), Postives = 117/131 (89.31%), Query Frame = 0

Query: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPSTYE-------FNKTEVLAGD 60
           MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPSTY+        +  EVLAGD
Sbjct: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPSTYDQYNIIHSKSTDEVLAGD 60

Query: 61  WYCHCGAHNYASRSSCYRC--NAYKSADICALPGWKSGDWICNRIGCETHNYASRMECYK 120
           WYC+CGAHNYASRSSCYRC  NAYKS DI ALPGWKSGDWIC+RIGCETHNYASRMECYK
Sbjct: 61  WYCNCGAHNYASRSSCYRCNSNAYKSLDIGALPGWKSGDWICSRIGCETHNYASRMECYK 120

Query: 121 CKTPRNFGGAV 123
           CKTPR+FGGAV
Sbjct: 121 CKTPRDFGGAV 131

BLAST of CmoCh12G012500 vs. ExPASy TrEMBL
Match: A0A6J1CPG4 (uncharacterized RNA-binding protein C17H9.04c-like OS=Momordica charantia OX=3673 GN=LOC111013106 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 1.5e-62
Identity = 107/128 (83.59%), Postives = 117/128 (91.41%), Query Frame = 0

Query: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPSTYEFNKTE---VLAGDWYCH 60
           MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDP+TYE++KT+   +LAGDWYC+
Sbjct: 3   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYHKTDHQALLAGDWYCN 62

Query: 61  CGAHNYASRSSCYRC--NAYKSAD-ICALPGWKSGDWICNRIGCETHNYASRMECYKCKT 120
           CGAHNYASRS+CYRC  NA+K+ D I ALPGWKSGDWIC RIGCE HNYASRMECYKC T
Sbjct: 63  CGAHNYASRSNCYRCNSNAFKNVDNIGALPGWKSGDWICTRIGCEMHNYASRMECYKCNT 122

Query: 121 PRNFGGAV 123
           PR+FGGAV
Sbjct: 123 PRDFGGAV 130

BLAST of CmoCh12G012500 vs. ExPASy TrEMBL
Match: A0A0A0LIX1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006080 PE=4 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 1.7e-61
Identity = 106/128 (82.81%), Postives = 113/128 (88.28%), Query Frame = 0

Query: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPSTYE-------FNKTEVLAGD 60
           MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDP+TY+        +  EVLAGD
Sbjct: 1   MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYDQYNIIHSKSTDEVLAGD 60

Query: 61  WYCHCGAHNYASRSSCYRC--NAYKSADICALPGWKSGDWICNRIGCETHNYASRMECYK 120
           WYC+CGAHNYASRSSCY+C  NAYKS DI ALPGWKSGDWIC+RIGCETHNYASRMECYK
Sbjct: 61  WYCNCGAHNYASRSSCYKCNSNAYKSLDIGALPGWKSGDWICSRIGCETHNYASRMECYK 120

BLAST of CmoCh12G012500 vs. TAIR 10
Match: AT2G26695.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 196.8 bits (499), Expect = 9.9e-51
Identity = 80/137 (58.39%), Postives = 100/137 (72.99%), Query Frame = 0

Query: 3   MNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPSTYEFNKTEVLAGDWYC---HCG 62
           M+W+GGDW+CG C+H NFKKRE+CQ+CGYPK+GG D STY +N+TEV+AGDWYC   +CG
Sbjct: 1   MSWTGGDWLCGACQHANFKKRESCQKCGYPKFGGVDVSTYLYNRTEVMAGDWYCGALNCG 60

Query: 63  AHNYASRSSCYRCN----------------AYKSADICALPGWKSGDWICNRIGCETHNY 121
           +HNYASR+SCYRC                 AY +      PGWK+GDW+C R+GC  HNY
Sbjct: 61  SHNYASRTSCYRCGMIKVEYTEQYYGAQMVAYGNDGAACPPGWKTGDWVCPRVGCGVHNY 120

BLAST of CmoCh12G012500 vs. TAIR 10
Match: AT3G15680.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 132.1 bits (331), Expect = 3.0e-31
Identity = 64/154 (41.56%), Postives = 85/154 (55.19%), Query Frame = 0

Query: 8   GDWMCGVCEHVNFKKREACQRCG-------------YPKYGGPDPSTYEFNK-TEVLAGD 67
           GDW C  C H+NF++R++CQRCG             +  +GG   S + F   ++V  GD
Sbjct: 5   GDWNCRSCSHLNFQRRDSCQRCGDSRSGPGGVGGLDFGNFGGRAMSAFGFTTGSDVRPGD 64

Query: 68  WYC---HCGAHNYASRSSCYRCNAYK------------------SADI--CALPG----- 119
           WYC   +CG HN+ASRS+C++C  +K                   ADI    +PG     
Sbjct: 65  WYCTVGNCGTHNFASRSTCFKCGTFKDETGAGGGGGGIGGPAMFDADIMRSRVPGNGGRS 124

BLAST of CmoCh12G012500 vs. TAIR 10
Match: AT5G25490.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 122.5 bits (306), Expect = 2.4e-28
Identity = 59/158 (37.34%), Postives = 79/158 (50.00%), Query Frame = 0

Query: 8   GDWMCGVCEHVNFKKREACQRCGYPKYGG------------PDPSTYEFNK-TEVLAGDW 67
           GDW C +C H+NF++R++CQRC  P+ GG            P  S++ FN   +V  GDW
Sbjct: 5   GDWNCRLCSHLNFQRRDSCQRCREPRPGGISTDLLSGFGGRPVSSSFGFNTGPDVRPGDW 64

Query: 68  YCH---CGAHNYASRSSCYRCNAYKSADICALPG-------------------------- 117
           YC+   CG HN+A+RSSC++C A K    C+                             
Sbjct: 65  YCNLGDCGTHNFANRSSCFKCGAAKDEFSCSSAAATTGFMDMNVGPRRGLFGFGGSSSGG 124

BLAST of CmoCh12G012500 vs. TAIR 10
Match: AT2G17975.1 (zinc finger (Ran-binding) family protein )

HSP 1 Score: 59.3 bits (142), Expect = 2.5e-09
Identity = 35/106 (33.02%), Postives = 48/106 (45.28%), Query Frame = 0

Query: 8   GDWMCGVCEHVNFKKREACQRCGYPKYGGPDPSTYEFNKTEVLAGDWYCHCGAHNYASRS 67
           GDW+C  C + N+  RE C++CG  K      S        +     Y   G  ++    
Sbjct: 50  GDWICTGCTNNNYASREKCKKCGQSKEVAA-LSALAIPGASLQTHLHYFTRGPESHDQPG 109

Query: 68  SCYR-CNAYKSADICALPGWKSGDWICNRIGCETHNYASRMECYKC 113
           S     NA   A +     W+SGDWIC    C  HNY+SR++C KC
Sbjct: 110 SLLAFSNATNQASV--HKEWRSGDWICR---CGFHNYSSRIQCKKC 149

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q5ZLX51.3e-0736.63Zinc finger Ran-binding domain-containing protein 2 OS=Gallus gallus OX=9031 GN=... [more]
O952186.6e-0735.64Zinc finger Ran-binding domain-containing protein 2 OS=Homo sapiens OX=9606 GN=Z... [more]
Q9R0206.6e-0735.64Zinc finger Ran-binding domain-containing protein 2 OS=Mus musculus OX=10090 GN=... [more]
Q19QU36.6e-0735.64Zinc finger Ran-binding domain-containing protein 2 OS=Sus scrofa OX=9823 GN=ZRA... [more]
Q5R5806.6e-0735.64Zinc finger Ran-binding domain-containing protein 2 OS=Pongo abelii OX=9601 GN=Z... [more]
Match NameE-valueIdentityDescription
A0A6J1FCS12.0e-75100.00zinc finger Ran-binding domain-containing protein 2-like OS=Cucurbita moschata O... [more]
A0A6J1HSH34.2e-7397.54zinc finger Ran-binding domain-containing protein 2-like OS=Cucurbita maxima OX=... [more]
A0A1S3C6B61.6e-6485.50uncharacterized RNA-binding protein C17H9.04c OS=Cucumis melo OX=3656 GN=LOC1034... [more]
A0A6J1CPG41.5e-6283.59uncharacterized RNA-binding protein C17H9.04c-like OS=Momordica charantia OX=367... [more]
A0A0A0LIX11.7e-6182.81Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006080 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT2G26695.19.9e-5158.39Ran BP2/NZF zinc finger-like superfamily protein [more]
AT3G15680.13.0e-3141.56Ran BP2/NZF zinc finger-like superfamily protein [more]
AT5G25490.12.4e-2837.34Ran BP2/NZF zinc finger-like superfamily protein [more]
AT2G17975.12.5e-0933.02zinc finger (Ran-binding) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001876Zinc finger, RanBP2-typeSMARTSM00547zf_4coord: 8..32
e-value: 4.3E-6
score: 36.2
coord: 89..115
e-value: 1.0E-5
score: 35.0
coord: 52..75
e-value: 3.3E-5
score: 33.3
IPR001876Zinc finger, RanBP2-typePFAMPF00641zf-RanBPcoord: 8..34
e-value: 2.8E-4
score: 20.1
coord: 87..116
e-value: 1.3E-7
score: 30.8
coord: 51..76
e-value: 3.2E-4
score: 20.0
IPR001876Zinc finger, RanBP2-typePROSITEPS01358ZF_RANBP2_1coord: 10..29
IPR001876Zinc finger, RanBP2-typePROSITEPS01358ZF_RANBP2_1coord: 91..112
IPR001876Zinc finger, RanBP2-typePROSITEPS50199ZF_RANBP2_2coord: 6..35
score: 8.817719
IPR001876Zinc finger, RanBP2-typePROSITEPS50199ZF_RANBP2_2coord: 87..118
score: 9.653342
NoneNo IPR availableGENE3D4.10.1060.10coord: 43..79
e-value: 3.9E-10
score: 40.8
coord: 84..118
e-value: 2.7E-10
score: 41.3
coord: 1..37
e-value: 6.8E-10
score: 40.1
NoneNo IPR availablePANTHERPTHR23111:SF41ZINC FINGER, RANBP2-TYPE-RELATEDcoord: 2..119
NoneNo IPR availablePANTHERPTHR23111ZINC FINGER PROTEINcoord: 2..119
IPR036443Zinc finger, RanBP2-type superfamilySUPERFAMILY90209Ran binding protein zinc finger-likecoord: 47..79
IPR036443Zinc finger, RanBP2-type superfamilySUPERFAMILY90209Ran binding protein zinc finger-likecoord: 86..118
IPR036443Zinc finger, RanBP2-type superfamilySUPERFAMILY90209Ran binding protein zinc finger-likecoord: 2..36

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh12G012500.1CmoCh12G012500.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046872 metal ion binding