CmoCh12G012340 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCGCAGATTAATTCTTCGAATATTCTTCGCCTACCGTTATATTCCCTCGATTCTCCTTTCTTTTTCCAACTGCTTCGACCTCACAATCGCCATTCCCACCACCACAAATTCCATTTCCAATTCCAATTTCTCTCTTGTTTCCCGTTCCCTTTCTGTTTCTCCGGCGCCGGAAACCGTGGTTATGAAGTTCGGCAAGAGTCTGAGCAACCAGATCGAAGAAACTTTGCCGGAGTGGCGGGACAAGTTTTTGTCATACAAGGAGTTGAAGAAGCGGCTCAAGCTTGTGGAGCCAAAAGGCGGTGACCGGCCGAGCAAGCGACCGAGAATTGATGCTGCCGTTGGGAGTTGTGCTGCGGATGGAGAGAAGGATGATTTTTCGTCGAGCGAGGAGATGAATTTCATTAAGCTGTTGGAGGATGAGCTTGAGAAATTTAATAGTTTTTTTGTGGAGAAGGAGGAAGAGTACATCATTAGATTGAAGGTATTTTTTTTCTTCTCTGCTTTTACTTTTTAGTTCCTCATTGTCTTGGAGAGAGCTGAGATCTTTGTTTTGTTCTGCTGCCGCGAATTTCATTAGTCTTGCAATTAATGAAGTAGATACGATTCAATTCTGGACTTTGACCTAGCCGAATGATCACCAGAAAATCCAATTCTTAGATGTCTACGGATCAATTTAGGCATTTAATCCTGTGGTTCTTGAAACAAGATGTTCAGTAATCGGTTAATGTTCATTCATGTCGTTTGTGCCAATCTGTAGAACTAGTTGATGATTCACATTCATTCCAGATTGCTGGTAGAGAAAAACCTCATGATCGAGAAATTTACACCAAAATAGTTTGATTAAATTGTTAAATTCATCTCTAGAAACTACAACCAATCAAACAATACAGGTCTCCAAGCTGATAACCAAATTGCTTCCACTTTCCTTTTTGAATAATTCAGGAGCTACAGGACAGGGTAGGAAAAGCAATGGATTCAAATGAAGAGATGATCAAAATTCGCAAGGAAATTGTGGACTTCCATGGAGAAATGGTTCTACTGGAGAATTATAGTGCCCTCAACTTTACAGGTATGCATTTTTTCCCTTGCTTTTCCTTTACCCTTTCTCTACTTTTATGCATTGATTGGTGCACTTGGCATGGTTGAATGTATTTACACCCTTTTGTGGTCAAGTCTGGTATATGAAATCTTTTTCTCCATCTTTCATTATGATGAAAATTCTTCAGAATTGATGAACTTTATGCTTTTTTATGTTCTTACGGCACATAATGATTTCTTTACTTACTTGGGATCTTGAAATTGTGGCCACATGCCGCTGAATCAATTCCTTGTGCGTAGAATATGCTTCAGTTGCCTATGAAAAAGATGAACACTCTGTAAGATTGAAGTAATTCGTTATTGCTCAAATCATCTAAGCGACAACTTGCATACCTTTTTATAGGGCTTGTGAAGATTCTAAAGAAGTATGACAAAAGGACTGGCGCGCTCATCCGCTTGCCCTACAGTCAGAAAGTTCTGCAACAGCCTTTCTTTACGACCGACTTGCTATACACGCTCGTAAAGCAGTGTGAGCTGATGTTGGATCTCCTCTTCCCTTTGAATGAGCAGCCTTCTTCTGGTTCAAATGGTGTCGATGAAGTCGGTGCTCCTACGAAGGCTGCCACCACCAACATTGATGATCTGCTCAAGGCAACCAAGGAACTTTCAGAGATAGAGTACATGGAGTCGCTTTATATGAAGAGCACTGTATCTGCATTACGGGTTTTGAAGGAAATCCGAAGCAGGAGCTCGACCGTTAGCGTCTTCTCATTGCCACCGTTGCAAATGAACGGATTAGAAGATACATGGAAGAACGTTCCAGTGCTGGAAGAAGTAGCTAAGTAGGATGGTTCCAGGTATCACCAACTACAAGGAAGTTCCCTTATAGCTTTGTATGTCTTCCTTTGATGTTCGTGTGAGGTACTTTCGATACTAACCATAACACGTAAAACTGATATATAAAGTTCAAATGATTGTAGAATCTTATAAAGGAATGGTAAATCTAATGTTCAAATGATTCAGAGTGGCCGAGGAATGTTAATGTAATGAATAGAATCAAAGAAGGGAAACGAATGCATCAAGAAGTTTTTA TCGCAGATTAATTCTTCGAATATTCTTCGCCTACCGTTATATTCCCTCGATTCTCCTTTCTTTTTCCAACTGCTTCGACCTCACAATCGCCATTCCCACCACCACAAATTCCATTTCCAATTCCAATTTCTCTCTTGTTTCCCGTTCCCTTTCTGTTTCTCCGGCGCCGGAAACCGTGGTTATGAAGTTCGGCAAGAGTCTGAGCAACCAGATCGAAGAAACTTTGCCGGAGTGGCGGGACAAGTTTTTGTCATACAAGGAGTTGAAGAAGCGGCTCAAGCTTGTGGAGCCAAAAGGCGGTGACCGGCCGAGCAAGCGACCGAGAATTGATGCTGCCGTTGGGAGTTGTGCTGCGGATGGAGAGAAGGATGATTTTTCGTCGAGCGAGGAGATGAATTTCATTAAGCTGTTGGAGGATGAGCTTGAGAAATTTAATAGTTTTTTTGTGGAGAAGGAGGAAGAGTACATCATTAGATTGAAGGAGCTACAGGACAGGGTAGGAAAAGCAATGGATTCAAATGAAGAGATGATCAAAATTCGCAAGGAAATTGTGGACTTCCATGGAGAAATGGTTCTACTGGAGAATTATAGTGCCCTCAACTTTACAGGGCTTGTGAAGATTCTAAAGAAGTATGACAAAAGGACTGGCGCGCTCATCCGCTTGCCCTACAGTCAGAAAGTTCTGCAACAGCCTTTCTTTACGACCGACTTGCTATACACGCTCGTAAAGCAGTGTGAGCTGATGTTGGATCTCCTCTTCCCTTTGAATGAGCAGCCTTCTTCTGGTTCAAATGGTGTCGATGAAGTCGGTGCTCCTACGAAGGCTGCCACCACCAACATTGATGATCTGCTCAAGGCAACCAAGGAACTTTCAGAGATAGAGTACATGGAGTCGCTTTATATGAAGAGCACTGTATCTGCATTACGGGTTTTGAAGGAAATCCGAAGCAGGAGCTCGACCGTTAGCGTCTTCTCATTGCCACCGTTGCAAATGAACGGATTAGAAGATACATGGAAGAACGTTCCAGTGCTGGAAGAAGTAGCTAAGTAGGATGGTTCCAGGTATCACCAACTACAAGGAAGTTCCCTTATAGCTTTGTATGTCTTCCTTTGATGTTCGTGTGAGGTACTTTCGATACTAACCATAACACGTAAAACTGATATATAAAGTTCAAATGATTGTAGAATCTTATAAAGGAATGGTAAATCTAATGTTCAAATGATTCAGAGTGGCCGAGGAATGTTAATGTAATGAATAGAATCAAAGAAGGGAAACGAATGCATCAAGAAGTTTTTA ATGAAGTTCGGCAAGAGTCTGAGCAACCAGATCGAAGAAACTTTGCCGGAGTGGCGGGACAAGTTTTTGTCATACAAGGAGTTGAAGAAGCGGCTCAAGCTTGTGGAGCCAAAAGGCGGTGACCGGCCGAGCAAGCGACCGAGAATTGATGCTGCCGTTGGGAGTTGTGCTGCGGATGGAGAGAAGGATGATTTTTCGTCGAGCGAGGAGATGAATTTCATTAAGCTGTTGGAGGATGAGCTTGAGAAATTTAATAGTTTTTTTGTGGAGAAGGAGGAAGAGTACATCATTAGATTGAAGGAGCTACAGGACAGGGTAGGAAAAGCAATGGATTCAAATGAAGAGATGATCAAAATTCGCAAGGAAATTGTGGACTTCCATGGAGAAATGGTTCTACTGGAGAATTATAGTGCCCTCAACTTTACAGGGCTTGTGAAGATTCTAAAGAAGTATGACAAAAGGACTGGCGCGCTCATCCGCTTGCCCTACAGTCAGAAAGTTCTGCAACAGCCTTTCTTTACGACCGACTTGCTATACACGCTCGTAAAGCAGTGTGAGCTGATGTTGGATCTCCTCTTCCCTTTGAATGAGCAGCCTTCTTCTGGTTCAAATGGTGTCGATGAAGTCGGTGCTCCTACGAAGGCTGCCACCACCAACATTGATGATCTGCTCAAGGCAACCAAGGAACTTTCAGAGATAGAGTACATGGAGTCGCTTTATATGAAGAGCACTGTATCTGCATTACGGGTTTTGAAGGAAATCCGAAGCAGGAGCTCGACCGTTAGCGTCTTCTCATTGCCACCGTTGCAAATGAACGGATTAGAAGATACATGGAAGAACGTTCCAGTGCTGGAAGAAGTAGCTAAGTAG MKFGKSLSNQIEETLPEWRDKFLSYKELKKRLKLVEPKGGDRPSKRPRIDAAVGSCAADGEKDDFSSSEEMNFIKLLEDELEKFNSFFVEKEEEYIIRLKELQDRVGKAMDSNEEMIKIRKEIVDFHGEMVLLENYSALNFTGLVKILKKYDKRTGALIRLPYSQKVLQQPFFTTDLLYTLVKQCELMLDLLFPLNEQPSSGSNGVDEVGAPTKAATTNIDDLLKATKELSEIEYMESLYMKSTVSALRVLKEIRSRSSTVSVFSLPPLQMNGLEDTWKNVPVLEEVAK Homology
BLAST of CmoCh12G012340 vs. ExPASy Swiss-Prot
Match: O48781 (SPX domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=SPX2 PE=2 SV=1) HSP 1 Score: 367.9 bits (943), Expect = 1.1e-100 Identity = 210/296 (70.95%), Postives = 239/296 (80.74%), Query Frame = 0
BLAST of CmoCh12G012340 vs. ExPASy Swiss-Prot
Match: Q8LBH4 (SPX domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=SPX1 PE=1 SV=2) HSP 1 Score: 355.1 bits (910), Expect = 7.3e-97 Identity = 196/290 (67.59%), Postives = 229/290 (78.97%), Query Frame = 0
BLAST of CmoCh12G012340 vs. ExPASy Swiss-Prot
Match: B8B4D0 (SPX domain-containing protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=SPX1 PE=3 SV=1) HSP 1 Score: 334.0 bits (855), Expect = 1.7e-90 Identity = 192/302 (63.58%), Postives = 228/302 (75.50%), Query Frame = 0
BLAST of CmoCh12G012340 vs. ExPASy Swiss-Prot
Match: Q69XJ0 (SPX domain-containing protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=SPX1 PE=1 SV=1) HSP 1 Score: 330.9 bits (847), Expect = 1.5e-89 Identity = 191/302 (63.25%), Postives = 227/302 (75.17%), Query Frame = 0
BLAST of CmoCh12G012340 vs. ExPASy Swiss-Prot
Match: A2X254 (SPX domain-containing protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=SPX2 PE=4 SV=1) HSP 1 Score: 271.9 bits (694), Expect = 8.1e-72 Identity = 162/282 (57.45%), Postives = 196/282 (69.50%), Query Frame = 0
BLAST of CmoCh12G012340 vs. ExPASy TrEMBL
Match: A0A6J1FCJ6 (SPX domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111444371 PE=4 SV=1) HSP 1 Score: 555.4 bits (1430), Expect = 1.4e-154 Identity = 289/289 (100.00%), Postives = 289/289 (100.00%), Query Frame = 0
BLAST of CmoCh12G012340 vs. ExPASy TrEMBL
Match: A0A6J1HS44 (SPX domain-containing protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111465623 PE=4 SV=1) HSP 1 Score: 551.6 bits (1420), Expect = 2.0e-153 Identity = 287/289 (99.31%), Postives = 287/289 (99.31%), Query Frame = 0
BLAST of CmoCh12G012340 vs. ExPASy TrEMBL
Match: A0A5D3BFB5 (SPX domain-containing protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00270 PE=4 SV=1) HSP 1 Score: 525.0 bits (1351), Expect = 2.0e-145 Identity = 276/290 (95.17%), Postives = 282/290 (97.24%), Query Frame = 0
BLAST of CmoCh12G012340 vs. ExPASy TrEMBL
Match: A0A1S3C6G7 (SPX domain-containing protein 1 OS=Cucumis melo OX=3656 GN=LOC103497222 PE=4 SV=1) HSP 1 Score: 525.0 bits (1351), Expect = 2.0e-145 Identity = 276/290 (95.17%), Postives = 282/290 (97.24%), Query Frame = 0
BLAST of CmoCh12G012340 vs. ExPASy TrEMBL
Match: A0A5A7V3Z6 (SPX domain-containing protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G001720 PE=4 SV=1) HSP 1 Score: 522.7 bits (1345), Expect = 9.7e-145 Identity = 275/290 (94.83%), Postives = 281/290 (96.90%), Query Frame = 0
BLAST of CmoCh12G012340 vs. TAIR 10
Match: AT2G26660.1 (SPX domain gene 2 ) HSP 1 Score: 367.9 bits (943), Expect = 7.7e-102 Identity = 210/296 (70.95%), Postives = 239/296 (80.74%), Query Frame = 0
BLAST of CmoCh12G012340 vs. TAIR 10
Match: AT5G20150.1 (SPX domain gene 1 ) HSP 1 Score: 355.1 bits (910), Expect = 5.2e-98 Identity = 196/290 (67.59%), Postives = 229/290 (78.97%), Query Frame = 0
BLAST of CmoCh12G012340 vs. TAIR 10
Match: AT5G15330.1 (SPX domain gene 4 ) HSP 1 Score: 207.6 bits (527), Expect = 1.3e-53 Identity = 129/299 (43.14%), Postives = 178/299 (59.53%), Query Frame = 0
BLAST of CmoCh12G012340 vs. TAIR 10
Match: AT2G45130.1 (SPX domain gene 3 ) HSP 1 Score: 183.0 bits (463), Expect = 3.5e-46 Identity = 117/289 (40.48%), Postives = 163/289 (56.40%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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