CmoCh12G011740 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh12G011740
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	transcription factor bHLH69-like
Location	Cmo_Chr12: 10624309 .. 10628311 (-)
RNA-Seq Expression	CmoCh12G011740
Synteny	CmoCh12G011740

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTCGCCGGACTGATATGAGACTCACCAACTCCCTCCCCGACCTCCATAGCAACCGCCGCAACCGGCCGCCAGAGACCGATGCCTCTCAACTCCACCACCACCAAAACCACCTTCAAGCCTCTCATCTCCATCCCTCTTCCTTCTCCTCCGACGATTTCCTCGACCAAATCCTCTCCTCCATCCCCCTTCCCTGGGAACTCCCTACCGGTCTTCCAAATCCCCACTCGAACCTCCCTCCTCAGCCACCGCAACTCCCTCGAAATCCCGACAATGCCGCTTTTCAGATCGGCGACACCACTCCAGCCGCCAAAATGGCCATGGCCATGCTTCACCAGCAGTTACTCACCACCGCGGCAGATTCCAGTCTCCTTACATTGCCTGGAAACGACGTCGTTGAAGTCGAAGGCTCTTCGTCCTTCAAATGCCCTAATCCGGTACTCAAAATCGATCTCTCAAATCTAATCGCTAATCATTCGATTCGAAAATAGGTTACGAAATACTCCCGAACCATTTCGATTCCTGTAAATTATTTGCGTAATCTTACAGATTATCGTCGACGGTTCCGTCAATCCGTCTCTCTTCAACGAATTCACCGGATTCCTCAACGCCTCCGGCTCCAGCCATAGCCATACCCTGAATCAATCTCAGGCAATAAGTAGTTCGATTCGATCGTACAGTTCTTCAAATTCATAACCTCGCTCTGCCCTAAAATTTCATTTCATCAATACACAGGGAAATTCAACTTCAACTTCACAGACACAGAGCTTCGGAGCTCCAGTATCAGCCAATACTCCACCTCCGGTGGGGACTGGTTCCGGCGGTGGTGCTAGCGCAGCGGCGCAGCCGCGACAGAGAGTCAGAGCTCGGCGAGGTCAAGCGACGGATCCTCACAGTATTGCGGAAAGAGTAATTAATTAAGTTTAATAAATTAATTAACGCTAATTAACATCCTCTATTTATTTTAATTATTTTAATTATTTTGTAACAGTTACGGAGAGAGCGAATTGCAGAGAGAATGAAAGCTCTACAAGAACTGGTTCCCAACGCTAACAAGGTCTGTTTCGTCATTTCCTATCCCTTACACGTGTGAACATCACGTTCGCTTTGTTATTTATCCAACGGTTTTAGTTCTGCCACGTTTTGTTTCTATTTTTATTTTATTTTTTAATACCTTGTATTCGGGGCCGGAGACCACACTCTTACATGGCGGGATTTGCAGCTTTAAATTTTATATACTTTTATATTATAAGGGATCAAAAGTTTAGAATAAGCTTTAATTACAAAACTTGTGCGTTTTTAGATAAGAAAAGTAATGAGCTGTTGAATATGTTTTCTTTTTCAAGTTTGACATAGGACCTCGAACACTTTAAGAACATATACATATGTCTGCCGAATCTCGAACACTTCTTCTAACACATATACATATGCCTTCTTGAGCTAGATTTGAGTTTGTTTTTTATCAATTTTATGCTGGATCGAAACATATTTGGTCTATTTCTCATTTTCTATTTCAAAATTTTAGTAATGATTGATAGAATGTGAGATCTCACCGTTGTTGGAGAGGAGAAACAAATCATTCCTTGTAAGGGTGTGAAAATCTTCTAGATGACGATAAGTAACGCGCCAAACTAGACAATATTTGTTGGTGGTAGGCAATGGAGAGGGGTGAGATCCCACATCGGTTGGAGAGGGGTGAGATCCCACATCGGTTGGAGAGGGGTGAGATCCCACATCGGTTGGAGAGGGGTGAGATCCCACATCGGTTGGAGAGGGGTGAGATCCCACATCGGTTGGAGAGGGGTGAGATCCCACATCGGTTGGAGAGGGGTGAGATCCCACATCGGTTGGAGAGGGGTGAGATCCCACATCGGTTGGAGAGGGGTGAGATCCCACATCGGTTGGAGAGGGGTGAGATCCCACATCGGTTGGAGAGGGGTGAGATCCCACATCGGTTGGAGAGGGGTGAGATCCCACATCGGTTGGAGAGGGGTGAGATCCCACATCGGTTGGAGAGGGGTGAGATCCCACATCGGTTGGAGAGGGGTGAGATCCCACATCGGTTGGAGAGGGGTGAGATCCCACATCGGTTGGAGAGGGGTGAGATCCCACATCGGTTGGAGAGGGGTGAGATCCCACATCGGTTGGAGAGGGGTGAGATCCCACATCGGTTGGAGAGGGGTGAGATCCCACATCGGTTGGAGAGGGGTGAGATCCCACATCGGTTGGAGAGGGGTGAGATCCCACATCGGTTGGAGAGGGGTGAGATCCCACATCGGTTGGAGAGGGGTGAGATCCCACATCGGTTGGAGAGGGGTGAGATCCCACATCGGTTGGAGAGGGGTGAGATCCCAGATCCCACATCGGTTGGAGAGGGGTGAGATAGGGCAACGAATCATTCCTTACAAGGGTATGGGATCCCAAGAGGGTGGATTGTGAGATCCCACGTCGGTTGGAGAGGGCAACGAAGCATTTCTTATAAGGATGTAAAAACCTCTCTCTAACTGAGCGTTTTAAAACCGTGAGGCCGACGTCGATACGTAACAAGCCAAAACAAACAATACTAGCGTGAGTTTGGGCTCTTACAAGAAAGATATATACATACTAATGTATAACTGAATAATGTTTTAGACATGGTTCTGATATCAGTCATTAGCGACAATTAATCTCTATAAGAGTTTGTCTATTTTAAACGTAAGTGTGCTTATAGTTTTTTCAAAACATCTCATATCAATGAAGATAGTGTACCTCACTTATAAACTCACTGATATTTGATGATATGAACAAAACCGTAGAAGTTGAACGGTTGAGCTATATTGATGCTAAGTTTGGCTGATTTTTATGGCTTGAAATGGATTTTGGAACGACAGACAGACAAGGCTTCAATGCTGGATGAGATCATAGACTACGTGAAGTTCCTCCAGCTTCAAGTCAAAGTAATCTGTCTCACTACAGTTGAAGACAAACATAAATAGAATGAAATTTACTGATTTTCTTTGCTGGGTGTGTGGCTGTAGGTTCTGAGTATGAGCAGGCTGGGCGGCGCCACTGCCTCCATGCCGTCCCAGCTTGTCGCCGACATGTCCTCCCACTCTGAGGTACTACCAAATCTTCACTTTTTCAAGTAATTTCTTTGTCATGAAAAGAATAAGATCCATTATATTTTTTGGATTTGGAATCATTATTAGTTTATGATTCGTATCATGGGATTTCATGATCATGTTTTGTTGCTATGGAAGATTCATGATATTACCCACCTTAGTTCATAATGGCCCCTGAGATTTCATGGAATATATGTATTTAATCTGAATTTAGTAAACGTTTTCTAAATGTTCTCTATTTATAGTCAAATAAATTAAACGTTTACTAATTTTGAGAATGATCATAGATTTATATCATAGCATGGAGAGTGTTCGTCTAACCATAAGGATATGGAAAGAGTAATAAATAGAAAGATGCACATTCGATACCTTTGTTTGGTAAATATGATATATATGATATATATTGTAAATATCAAATATGATGTATATGTAAACTATAATTTAGTGCAAAGTATCTTTAACCGTATTTTCTCATTTTTGTAGGGTGGGATCCACAACCAGTCCAATGGAACCGGAGGAGCTGCCGGACAGACGTTCGCCGGAGCTCCGGCAAGTAATGACACGATGACGGTGACGGAGCATCAGGTGGTGAAGTTAATGGAGAAGGACATGGGCTCCGCCATGCAGTACTTACAAGGCAAAGGCCTTTGTCTCATGCCCATCTCTCTAGCCACCGCTATCTCCACCGCCACATGTCACAGCCGCCCTGTTACAGCCTCTAGAGGCGGCGGAGATCGCCCTACCTCACCCAGCCTGTCGGCGTTGACCGTTCAGTCAACCGCCTTGCGTAACGGCACCGTCAAAGATAAGGCCTCTATTTCTCGGCCGTGAGATGACGGTGTTAACGAAATGTCAAAAAAAAAATGTTAAAAAGCCAAATTTAGTCCCTTTATTTAAGAAAAAA

mRNA sequence

TCTCGCCGGACTGATATGAGACTCACCAACTCCCTCCCCGACCTCCATAGCAACCGCCGCAACCGGCCGCCAGAGACCGATGCCTCTCAACTCCACCACCACCAAAACCACCTTCAAGCCTCTCATCTCCATCCCTCTTCCTTCTCCTCCGACGATTTCCTCGACCAAATCCTCTCCTCCATCCCCCTTCCCTGGGAACTCCCTACCGGTCTTCCAAATCCCCACTCGAACCTCCCTCCTCAGCCACCGCAACTCCCTCGAAATCCCGACAATGCCGCTTTTCAGATCGGCGACACCACTCCAGCCGCCAAAATGGCCATGGCCATGCTTCACCAGCAGTTACTCACCACCGCGGCAGATTCCAGTCTCCTTACATTGCCTGGAAACGACGTCGTTGAAGTCGAAGGCTCTTCGTCCTTCAAATGCCCTAATCCGATTATCGTCGACGGTTCCGTCAATCCGTCTCTCTTCAACGAATTCACCGGATTCCTCAACGCCTCCGGCTCCAGCCATAGCCATACCCTGAATCAATCTCAGGGAAATTCAACTTCAACTTCACAGACACAGAGCTTCGGAGCTCCAGTATCAGCCAATACTCCACCTCCGGTGGGGACTGGTTCCGGCGGTGGTGCTAGCGCAGCGGCGCAGCCGCGACAGAGAGTCAGAGCTCGGCGAGGTCAAGCGACGGATCCTCACAGTATTGCGGAAAGATTACGGAGAGAGCGAATTGCAGAGAGAATGAAAGCTCTACAAGAACTGGTTCCCAACGCTAACAAGACAGACAAGGCTTCAATGCTGGATGAGATCATAGACTACGTGAAGTTCCTCCAGCTTCAAGTCAAAGTTCTGAGTATGAGCAGGCTGGGCGGCGCCACTGCCTCCATGCCGTCCCAGCTTGTCGCCGACATGTCCTCCCACTCTGAGGGTGGGATCCACAACCAGTCCAATGGAACCGGAGGAGCTGCCGGACAGACGTTCGCCGGAGCTCCGGCAAGTAATGACACGATGACGGTGACGGAGCATCAGGTGGTGAAGTTAATGGAGAAGGACATGGGCTCCGCCATGCAGTACTTACAAGGCAAAGGCCTTTGTCTCATGCCCATCTCTCTAGCCACCGCTATCTCCACCGCCACATGTCACAGCCGCCCTGTTACAGCCTCTAGAGGCGGCGGAGATCGCCCTACCTCACCCAGCCTGTCGGCGTTGACCGTTCAGTCAACCGCCTTGCGTAACGGCACCGTCAAAGATAAGGCCTCTATTTCTCGGCCGTGAGATGACGGTGTTAACGAAATGTCAAAAAAAAAATGTTAAAAAGCCAAATTTAGTCCCTTTATTTAAGAAAAAA

Coding sequence (CDS)

ATGAGACTCACCAACTCCCTCCCCGACCTCCATAGCAACCGCCGCAACCGGCCGCCAGAGACCGATGCCTCTCAACTCCACCACCACCAAAACCACCTTCAAGCCTCTCATCTCCATCCCTCTTCCTTCTCCTCCGACGATTTCCTCGACCAAATCCTCTCCTCCATCCCCCTTCCCTGGGAACTCCCTACCGGTCTTCCAAATCCCCACTCGAACCTCCCTCCTCAGCCACCGCAACTCCCTCGAAATCCCGACAATGCCGCTTTTCAGATCGGCGACACCACTCCAGCCGCCAAAATGGCCATGGCCATGCTTCACCAGCAGTTACTCACCACCGCGGCAGATTCCAGTCTCCTTACATTGCCTGGAAACGACGTCGTTGAAGTCGAAGGCTCTTCGTCCTTCAAATGCCCTAATCCGATTATCGTCGACGGTTCCGTCAATCCGTCTCTCTTCAACGAATTCACCGGATTCCTCAACGCCTCCGGCTCCAGCCATAGCCATACCCTGAATCAATCTCAGGGAAATTCAACTTCAACTTCACAGACACAGAGCTTCGGAGCTCCAGTATCAGCCAATACTCCACCTCCGGTGGGGACTGGTTCCGGCGGTGGTGCTAGCGCAGCGGCGCAGCCGCGACAGAGAGTCAGAGCTCGGCGAGGTCAAGCGACGGATCCTCACAGTATTGCGGAAAGATTACGGAGAGAGCGAATTGCAGAGAGAATGAAAGCTCTACAAGAACTGGTTCCCAACGCTAACAAGACAGACAAGGCTTCAATGCTGGATGAGATCATAGACTACGTGAAGTTCCTCCAGCTTCAAGTCAAAGTTCTGAGTATGAGCAGGCTGGGCGGCGCCACTGCCTCCATGCCGTCCCAGCTTGTCGCCGACATGTCCTCCCACTCTGAGGGTGGGATCCACAACCAGTCCAATGGAACCGGAGGAGCTGCCGGACAGACGTTCGCCGGAGCTCCGGCAAGTAATGACACGATGACGGTGACGGAGCATCAGGTGGTGAAGTTAATGGAGAAGGACATGGGCTCCGCCATGCAGTACTTACAAGGCAAAGGCCTTTGTCTCATGCCCATCTCTCTAGCCACCGCTATCTCCACCGCCACATGTCACAGCCGCCCTGTTACAGCCTCTAGAGGCGGCGGAGATCGCCCTACCTCACCCAGCCTGTCGGCGTTGACCGTTCAGTCAACCGCCTTGCGTAACGGCACCGTCAAAGATAAGGCCTCTATTTCTCGGCCGTGA

Protein sequence

MRLTNSLPDLHSNRRNRPPETDASQLHHHQNHLQASHLHPSSFSSDDFLDQILSSIPLPWELPTGLPNPHSNLPPQPPQLPRNPDNAAFQIGDTTPAAKMAMAMLHQQLLTTAADSSLLTLPGNDVVEVEGSSSFKCPNPIIVDGSVNPSLFNEFTGFLNASGSSHSHTLNQSQGNSTSTSQTQSFGAPVSANTPPPVGTGSGGGASAAAQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGATASMPSQLVADMSSHSEGGIHNQSNGTGGAAGQTFAGAPASNDTMTVTEHQVVKLMEKDMGSAMQYLQGKGLCLMPISLATAISTATCHSRPVTASRGGGDRPTSPSLSALTVQSTALRNGTVKDKASISRP

Homology

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BLAST of CmoCh12G011740 vs. ExPASy Swiss-Prot
Match: D0PX88 (bHLH transcription factor RHL1 OS=Lotus japonicus OX=34305 GN=RHL1 PE=2 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 9.9e-79
Identity = 217/417 (52.04%), Postives = 256/417 (61.39%), Query Frame = 0


Query: 31  NHLQASHLHPSSFSSDDFLDQILSSIPLPWELPTGLPNPHSNLPPQPPQLPRNPDN-AAF 90
           NH Q  +      S DDFL+Q+LS++P  W+       P+S+L  +       PDN AAF
Sbjct: 3   NHHQQLNPQFDPTSHDDFLEQMLSTLPSFWD-------PNSDLSAE-----TTPDNVAAF 62

Query: 91  QIGD-------------TTPAAKMAMAMLHQQLLTTAADSSLLTLPGNDVVEVEGSSSFK 150
              +             T+P  K A A++ QQ         LL +P NDV  V+ ++ FK
Sbjct: 63  PFDEHSTLNSKFRNHQITSPTTKAAAALMLQQ--------HLLQMPANDV--VDPTNFFK 122

Query: 151 CPNPIIVDGSVNPSLFNEFTGFLNASGSSHSHTLNQSQGNSTSTSQTQSFGAPVSANTPP 210
            PNP     +   +L+N FTG LN +     H  +  QGNS    Q Q+FGA   A  PP
Sbjct: 123 SPNPGGEASASVQALYNGFTGSLNGT-QPQQHFQHPPQGNSNQI-QGQNFGATNQA--PP 182

Query: 211 PVGTGSGGGASAAAQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTD 270
             G+  GGG    A+P  RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTD
Sbjct: 183 ASGSAGGGGNQGQAKP--RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTD 242

Query: 271 KASMLDEIIDYVKFLQLQVKVLSMSRLGGATASMPSQLVADMSSHSEGGIHNQSNGTGGA 330
           KASMLDEIIDYVKFLQLQVKVLSMSRLGGA A  P  LVAD+SS   GG       T GA
Sbjct: 243 KASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAP--LVADISSEGGGGGGGGDCVTNGA 302

Query: 331 AG----QTFAGAPASNDTMTVTEHQVVKLMEKDMGSAMQYLQGKGLCLMPISLATAISTA 390
            G     T   A  +ND++T+TEHQV KLME+DMGSAMQYLQGKGLCLMPISLATAISTA
Sbjct: 303 GGVLPRSTTTAASTTNDSLTMTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISTA 362

Query: 391 TCHSRP----------VTASRGGGDRPTSPSLSALTVQSTALRN-GTVKDKASISRP 419
           TCH+R             A+   G+ P+SP++S LTVQS    N  TVKD   +S+P
Sbjct: 363 TCHTRSPLIPNNLANLAAAAASNGEGPSSPNMSVLTVQSAVAGNDSTVKD---VSKP 386

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BLAST of CmoCh12G011740 vs. ExPASy Swiss-Prot
Match: Q9ZUG9 (Transcription factor LRL1 OS=Arabidopsis thaliana OX=3702 GN=LRL1 PE=1 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 6.0e-60
Identity = 156/273 (57.14%), Postives = 183/273 (67.03%), Query Frame = 0


Query: 144 DGSVNPSLFNEFTGFLNASGSSHSHTLNQSQGNSTSTSQTQSFGAPVSANTPPPVGTGSG 203
           DGS   +L+N F    + +GS  +  + Q  G      Q Q+              T +G
Sbjct: 73  DGSSVHALYNGF----SVAGSLPNFQIPQGSGGGLMNQQGQT---QTQTQPQASASTATG 132

Query: 204 GGASAAAQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDE 263
           G  +A  Q R ++RARRGQATDPHSIAERLRRERIAERMKALQELVPN NKTDKASMLDE
Sbjct: 133 GTVAAPPQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDE 192

Query: 264 IIDYVKFLQLQVKVLSMSRLGGATASMPSQLVADMSSHSEGGIHNQSNGTGGAAGQTFAG 323
           IIDYVKFLQLQVKVLSMSRLGGA AS+ SQ+         GG H  ++       QT   
Sbjct: 193 IIDYVKFLQLQVKVLSMSRLGGA-ASVSSQI------SEAGGSHGNASSAMVGGSQT--- 252

Query: 324 APASNDTMTVTEHQVVKLMEKDMGSAMQYLQGKGLCLMPISLATAISTATCHSR----PV 383
           A  SND++T+TEHQV KLME+DMGSAMQYLQGKGLCLMPISLATAISTATCHSR    P 
Sbjct: 253 AGNSNDSVTMTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISTATCHSRNPLIPG 312

Query: 384 TASRGGGDRPTSPSLSALTVQSTALRNGTVKDK 413
             +  GG  P+ P+LS +T+QST+ + G+   K
Sbjct: 313 AVADVGG--PSPPNLSGMTIQSTSTKMGSGNGK 326

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BLAST of CmoCh12G011740 vs. ExPASy Swiss-Prot
Match: Q8S3D5 (Transcription factor LRL2 OS=Arabidopsis thaliana OX=3702 GN=LRL2 PE=2 SV=2)

HSP 1 Score: 215.7 bits (548), Expect = 1.0e-54
Identity = 161/275 (58.55%), Postives = 177/275 (64.36%), Query Frame = 0


Query: 148 NPSLFNEFTGFLNASGSSHSHTLNQSQGNSTSTSQTQSFGAPVSANTPPPVGTGSGGGAS 207
           N +LFN F     ++GS   H L Q  G  T   QTQS  A  SA T         GGA+
Sbjct: 81  NDALFNGF-----STGSLPFH-LPQGSGGQT---QTQS-QATASATT---------GGAT 140

Query: 208 AAAQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDY 267
           A  Q + +VRARRGQATDPHSIAERLRRERIAERMK+LQELVPN NKTDKASMLDEIIDY
Sbjct: 141 AQPQTKPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDY 200

Query: 268 VKFLQLQVKVLSMSRLGGATASMPSQLVADMSSHSEGGIHNQSNGTGGAAGQTFAGAPAS 327
           VKFLQLQVKVLSMSRLGGA AS  SQ+     S   GG H  ++ +G A           
Sbjct: 201 VKFLQLQVKVLSMSRLGGA-ASASSQI-----SEDAGGSHENTSSSGEA----------- 260

Query: 328 NDTMTVTEHQVVKLMEKDMGSAMQYLQGKGLCLMPISLATAISTATCHSRPVTASRGGGD 387
                +TEHQV KLME+DMGSAMQYLQGKGLCLMPISLAT ISTATC SR       G  
Sbjct: 261 ----KMTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATTISTATCPSRSPFVKDTG-- 310

Query: 388 RPTSPSLSALTVQSTALRNG----TVKDKASISRP 419
            P SP+LS   V   A  NG    TVKD  S+S+P
Sbjct: 321 VPLSPNLSTTIV---ANGNGSSLVTVKDAPSVSKP 310

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BLAST of CmoCh12G011740 vs. ExPASy Swiss-Prot
Match: Q9LSQ3 (Transcription factor LRL3 OS=Arabidopsis thaliana OX=3702 GN=LRL3 PE=2 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 4.1e-48
Identity = 128/218 (58.72%), Postives = 155/218 (71.10%), Query Frame = 0


Query: 197 PVGTGSGGGASAAAQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTD 256
           P GT S   A    Q + RVRARRGQATDPHSIAERLRRERIAERMK+LQELVPN NKTD
Sbjct: 81  PQGTVSTTSAPVVRQ-KPRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKTD 140

Query: 257 KASMLDEIIDYVKFLQLQVKVLSMSRLGGATASMPSQLVADMSSHSEGGIH------NQS 316
           KASMLDEII+YV+FLQLQVKVLSMSRLGGA +  P   +  +S+ + G ++      N  
Sbjct: 141 KASMLDEIIEYVRFLQLQVKVLSMSRLGGAGSVGPR--LNGLSAEAGGRLNALTAPCNGL 200

Query: 317 NGTGGAAGQTFAGAPASNDTMTVTEHQVVKLMEKDMGSAMQYLQGKGLCLMPISLATAIS 376
           NG G A G       +SN+++  TE +V KLME+DMGSAMQYLQGKGLCLMPISLATAIS
Sbjct: 201 NGNGNATG-------SSNESLRSTEQRVAKLMEEDMGSAMQYLQGKGLCLMPISLATAIS 260

Query: 377 TATCHSR-----PVTASRGGGD-RPTSPSLSALTVQST 403
           ++T HSR     P++++    D   T+ +++A    ST
Sbjct: 261 SSTTHSRGSLFNPISSAVAAEDSNVTATAVAAPEASST 288

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BLAST of CmoCh12G011740 vs. ExPASy Swiss-Prot
Match: O22768 (Transcription factor UNE12 OS=Arabidopsis thaliana OX=3702 GN=UNE12 PE=1 SV=2)

HSP 1 Score: 159.8 bits (403), Expect = 6.5e-38
Identity = 124/231 (53.68%), Postives = 141/231 (61.04%), Query Frame = 0


Query: 157 GFLNASG--SSHSHTLNQSQGNSTSTSQTQSFGAPVSANTPPPVGTGSGGGASAAAQP-- 216
           GFL   G   S     +    N  S+ +    G P+    PPP         SA  QP  
Sbjct: 93  GFLRPEGGHGSGKRFSDDVVDNRCSSMKPVFHGQPM--QQPPP---------SAPHQPTS 152

Query: 217 -RQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFL 276
            R RVRARRGQATDPHSIAERLRRERIAER++ALQELVP  NKTD+A+M+DEI+DYVKFL
Sbjct: 153 IRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKTDRAAMIDEIVDYVKFL 212

Query: 277 QLQVKVLSMSRLGGATASMPSQLVADMSSHSEGGIHNQSNGTGGAAGQTFAGAPASNDTM 336
           +LQVKVLSMSRLGGA A  P  LV DM   S         G GG   Q  A    SND  
Sbjct: 213 RLQVKVLSMSRLGGAGAVAP--LVTDMPLSSS---VEDETGEGGRTPQP-AWEKWSNDG- 272

Query: 337 TVTEHQVVKLMEKDMGSAMQYLQGKGLCLMPISLATAISTATCHSRPVTAS 383
             TE QV KLME+++G+AMQ LQ K LC+MPISLA AI     HS+P   S
Sbjct: 273 --TERQVAKLMEENVGAAMQLLQSKALCMMPISLAMAI----YHSQPPDTS 299

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BLAST of CmoCh12G011740 vs. ExPASy TrEMBL
Match: A0A6J1FBH4 (transcription factor bHLH69-like OS=Cucurbita moschata OX=3662 GN=LOC111444106 PE=4 SV=1)

HSP 1 Score: 790.8 bits (2041), Expect = 2.8e-225
Identity = 418/418 (100.00%), Postives = 418/418 (100.00%), Query Frame = 0


Query: 1   MRLTNSLPDLHSNRRNRPPETDASQLHHHQNHLQASHLHPSSFSSDDFLDQILSSIPLPW 60
           MRLTNSLPDLHSNRRNRPPETDASQLHHHQNHLQASHLHPSSFSSDDFLDQILSSIPLPW
Sbjct: 1   MRLTNSLPDLHSNRRNRPPETDASQLHHHQNHLQASHLHPSSFSSDDFLDQILSSIPLPW 60

Query: 61  ELPTGLPNPHSNLPPQPPQLPRNPDNAAFQIGDTTPAAKMAMAMLHQQLLTTAADSSLLT 120
           ELPTGLPNPHSNLPPQPPQLPRNPDNAAFQIGDTTPAAKMAMAMLHQQLLTTAADSSLLT
Sbjct: 61  ELPTGLPNPHSNLPPQPPQLPRNPDNAAFQIGDTTPAAKMAMAMLHQQLLTTAADSSLLT 120

Query: 121 LPGNDVVEVEGSSSFKCPNPIIVDGSVNPSLFNEFTGFLNASGSSHSHTLNQSQGNSTST 180
           LPGNDVVEVEGSSSFKCPNPIIVDGSVNPSLFNEFTGFLNASGSSHSHTLNQSQGNSTST
Sbjct: 121 LPGNDVVEVEGSSSFKCPNPIIVDGSVNPSLFNEFTGFLNASGSSHSHTLNQSQGNSTST 180

Query: 181 SQTQSFGAPVSANTPPPVGTGSGGGASAAAQPRQRVRARRGQATDPHSIAERLRRERIAE 240
           SQTQSFGAPVSANTPPPVGTGSGGGASAAAQPRQRVRARRGQATDPHSIAERLRRERIAE
Sbjct: 181 SQTQSFGAPVSANTPPPVGTGSGGGASAAAQPRQRVRARRGQATDPHSIAERLRRERIAE 240

Query: 241 RMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGATASMPSQLVADMSS 300
           RMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGATASMPSQLVADMSS
Sbjct: 241 RMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGATASMPSQLVADMSS 300

Query: 301 HSEGGIHNQSNGTGGAAGQTFAGAPASNDTMTVTEHQVVKLMEKDMGSAMQYLQGKGLCL 360
           HSEGGIHNQSNGTGGAAGQTFAGAPASNDTMTVTEHQVVKLMEKDMGSAMQYLQGKGLCL
Sbjct: 301 HSEGGIHNQSNGTGGAAGQTFAGAPASNDTMTVTEHQVVKLMEKDMGSAMQYLQGKGLCL 360

Query: 361 MPISLATAISTATCHSRPVTASRGGGDRPTSPSLSALTVQSTALRNGTVKDKASISRP 419
           MPISLATAISTATCHSRPVTASRGGGDRPTSPSLSALTVQSTALRNGTVKDKASISRP
Sbjct: 361 MPISLATAISTATCHSRPVTASRGGGDRPTSPSLSALTVQSTALRNGTVKDKASISRP 418

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BLAST of CmoCh12G011740 vs. ExPASy TrEMBL
Match: A0A6J1HL74 (transcription factor bHLH69-like OS=Cucurbita maxima OX=3661 GN=LOC111465560 PE=4 SV=1)

HSP 1 Score: 735.3 bits (1897), Expect = 1.4e-208
Identity = 395/419 (94.27%), Postives = 399/419 (95.23%), Query Frame = 0


Query: 1   MRLTNSLPDLHSNRRNRPPETDASQLHHHQNHLQASHLHPSSFSSDDFLDQILSSIPLPW 60
           MRLTNSLPD HSNRRNRPPETD SQ HHHQNHLQ SHLH SSFSSDDFLDQILSSIPLPW
Sbjct: 1   MRLTNSLPDRHSNRRNRPPETDTSQHHHHQNHLQTSHLHLSSFSSDDFLDQILSSIPLPW 60

Query: 61  ELPTGLPNPHSNLPPQPPQLPRNPDNAAFQIGDTTPAAKMAMAMLHQQLLTTAADSSLLT 120
           ELPTGLPNPHSNLPPQPP L +NPDNAAFQIGDTTPAAK+AMAMLHQQLLTTAADSSLLT
Sbjct: 61  ELPTGLPNPHSNLPPQPPPLSQNPDNAAFQIGDTTPAAKIAMAMLHQQLLTTAADSSLLT 120

Query: 121 LPGNDVVEVEGSSSFKCPNPIIVDGSVNPSLFNEFTGFLNASGSSHSHTLNQSQGNSTST 180
           LPGNDVVEVEGS SFKCPNPII DGSVNPSLFNEFTGFLNASGSSHSH LNQSQGNSTST
Sbjct: 121 LPGNDVVEVEGSPSFKCPNPIIADGSVNPSLFNEFTGFLNASGSSHSHNLNQSQGNSTST 180

Query: 181 SQTQSFGAPVSANTPPPVGTGSGGGASAAAQPRQRVRARRGQATDPHSIAERLRRERIAE 240
           SQ QSFGAPVSANTPPPVGTGSGGGASAAAQPRQRVRARRGQATDPHSIAERLRRERIAE
Sbjct: 181 SQKQSFGAPVSANTPPPVGTGSGGGASAAAQPRQRVRARRGQATDPHSIAERLRRERIAE 240

Query: 241 RMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGATASMPSQLVADMSS 300
           RMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGATASMPSQLVADMSS
Sbjct: 241 RMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGATASMPSQLVADMSS 300

Query: 301 HSEGGIH-NQSNGTGGAAGQTFAGAPASNDTMTVTEHQVVKLMEKDMGSAMQYLQGKGLC 360
           HSEG I  NQSNGTGGAAGQ FAGAPA N+TM VTEHQVVKLMEKDMGSAMQYLQGKGLC
Sbjct: 301 HSEGEIDGNQSNGTGGAAGQAFAGAPAFNETMAVTEHQVVKLMEKDMGSAMQYLQGKGLC 360

Query: 361 LMPISLATAISTATCHSRPVTASRGGGDRPTSPSLSALTVQSTALRNGTVKDKASISRP 419
           LMPISLATAISTATCH+RPVTASRGGGDRPTS SLSALTVQST L NGTVKDKASISRP
Sbjct: 361 LMPISLATAISTATCHNRPVTASRGGGDRPTSASLSALTVQSTTLGNGTVKDKASISRP 419

[Close]

BLAST of CmoCh12G011740 vs. ExPASy TrEMBL
Match: A0A6J1G4B7 (transcription factor bHLH69-like OS=Cucurbita moschata OX=3662 GN=LOC111450664 PE=4 SV=1)

HSP 1 Score: 561.2 bits (1445), Expect = 3.6e-156
Identity = 327/428 (76.40%), Postives = 350/428 (81.78%), Query Frame = 0


Query: 1   MRLTNSLPDLHSNRRNRPPETDASQLHHHQNHLQASHLHPSSFSSDDFLDQILSSIPLPW 60
           MRLTNSLPDLHS+RRN PPETD SQLHH   HLQ S  HP SFSSDDFLDQILS+ P PW
Sbjct: 1   MRLTNSLPDLHSHRRNHPPETDDSQLHH---HLQTSVFHPPSFSSDDFLDQILSTAPPPW 60

Query: 61  ELPTGLPNPHSNLPPQPPQLPRNPDNAAFQIGDTTPAAKMAMAMLHQQLL------TTAA 120
           ELP GLPNPHSNLPPQPP  P NPDN AFQIGD TPA KMAMA+L QQLL      T + 
Sbjct: 61  ELPVGLPNPHSNLPPQPPP-PSNPDNVAFQIGDATPAGKMAMALLQQQLLMSRGIATVSD 120

Query: 121 DSSLLTLPGNDVVEVEGSSSFKCPNPIIVDGSVNPSLFNEFTGFLNASGSSHSHTLNQSQ 180
           DSSLL +  NDVV+VEGSSSFKCPNP I  GSV PS+FNEFTGFLNASGSS S   NQ Q
Sbjct: 121 DSSLLPMLSNDVVDVEGSSSFKCPNP-INHGSVIPSIFNEFTGFLNASGSSQSQ--NQFQ 180

Query: 181 GNSTSTSQTQSFGAPVSANTPPPVGTGSGGGASAAAQPRQRVRARRGQATDPHSIAERLR 240
             + S SQ Q+F APVS N PPP   GSGGG++ +AQPRQRVRARRGQATDPHSIAERLR
Sbjct: 181 AGN-SNSQKQNFIAPVSINPPPPSVPGSGGGSATSAQPRQRVRARRGQATDPHSIAERLR 240

Query: 241 RERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGATASMPSQL 300
           RERIAERMK LQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLS+SRLGGATA+MPS L
Sbjct: 241 RERIAERMKGLQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSVSRLGGATAAMPS-L 300

Query: 301 VADMSSHSEGGIHNQSNGTGGAAGQTFAGAPASNDTMTVTEHQVVKLMEKDMGSAMQYLQ 360
           + D SS  +G   N SN TGGA GQT AGAP SND M +TE+QVVKLME+DMGSAMQYLQ
Sbjct: 301 LPD-SSTQDGTDCNLSNETGGAVGQTSAGAPTSNDAMAITENQVVKLMEEDMGSAMQYLQ 360

Query: 361 GKGLCLMPISLATAISTATCHSRPVTASRGGGDRPTSPSLSALTVQSTALRNGT----VK 419
           GKGLCLMPISLATAIS ATCHSRP+T S+GGGD PTSPSLSALT QST L NGT    V+
Sbjct: 361 GKGLCLMPISLATAISAATCHSRPITTSKGGGDAPTSPSLSALTSQSTVLGNGTVDRAVR 418

[Close]

BLAST of CmoCh12G011740 vs. ExPASy TrEMBL
Match: A0A6J1KH22 (transcription factor bHLH69-like OS=Cucurbita maxima OX=3661 GN=LOC111493801 PE=4 SV=1)

HSP 1 Score: 558.9 bits (1439), Expect = 1.8e-155
Identity = 326/429 (75.99%), Postives = 349/429 (81.35%), Query Frame = 0


Query: 1   MRLTNSLPDLHSNRRNRPPETDASQLHHHQNHLQASHLHPSSFSSDDFLDQILSSIPLPW 60
           MRLTNSLPDLHS+RRN+PPETD SQLHH   HLQ S  HP SFSSDDFLDQILS+ P PW
Sbjct: 1   MRLTNSLPDLHSHRRNQPPETDDSQLHH---HLQTSLFHPPSFSSDDFLDQILSTAPPPW 60

Query: 61  ELPTGLPNPHSNLPPQPPQLPRNPDNAAFQIGDTTPAAKMAMAMLHQQLL------TTAA 120
           ELP GLPNPHSNLPPQPP  P NPDN AFQIGD TPA KMAMA+L QQLL      T + 
Sbjct: 61  ELPVGLPNPHSNLPPQPPP-PSNPDNGAFQIGDATPAGKMAMALLQQQLLMSRGIATVSD 120

Query: 121 DSSLLTLPGNDVVEVEGSSSFKCPNPIIVDGSVNPSLFNEFTGFLNASGSSHSHTLNQSQ 180
            SSLL +  NDVVEVEGSSSFKCPNP I  GSV PS+FNEFTGFLNASGSS +   NQ Q
Sbjct: 121 VSSLLPMLSNDVVEVEGSSSFKCPNP-INHGSVIPSIFNEFTGFLNASGSSQNQ--NQFQ 180

Query: 181 GNSTSTSQTQSFGAPVSANTPPPVGTGSGGGASAAAQPRQRVRARRGQATDPHSIAERLR 240
             + S SQ Q+F APVS N PPP   GSGGGA+ +AQPRQRVRARRGQATDPHSIAERLR
Sbjct: 181 AGN-SNSQKQNFIAPVSINPPPPSVPGSGGGAATSAQPRQRVRARRGQATDPHSIAERLR 240

Query: 241 RERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGATASMPSQL 300
           RERIAERMK LQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLS+SRLGGATA+MPS L
Sbjct: 241 RERIAERMKGLQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSVSRLGGATAAMPSLL 300

Query: 301 VADMSSHSEGGIH-NQSNGTGGAAGQTFAGAPASNDTMTVTEHQVVKLMEKDMGSAMQYL 360
                S ++GG   N SN TGGA GQT AGAP SND M +TE+QVVKLME+DMGSAMQYL
Sbjct: 301 ---PDSSTQGGTDCNLSNETGGAVGQTSAGAPTSNDAMAITENQVVKLMEEDMGSAMQYL 360

Query: 361 QGKGLCLMPISLATAISTATCHSRPVTASRGGGDRPTSPSLSALTVQSTALRNGT----V 419
           QGKGLCLMPISLATAIS ATCHSRP+T S+GGGD PTSPSLSALT QST L NGT    V
Sbjct: 361 QGKGLCLMPISLATAISAATCHSRPITTSKGGGDAPTSPSLSALTSQSTVLGNGTVDRAV 418

[Close]

BLAST of CmoCh12G011740 vs. ExPASy TrEMBL
Match: A0A0A0LFE4 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G009480 PE=4 SV=1)

HSP 1 Score: 543.1 bits (1398), Expect = 1.0e-150
Identity = 320/436 (73.39%), Postives = 351/436 (80.50%), Query Frame = 0


Query: 1   MRLTNSLPDLHSNRRNRPPETDASQLHHHQNHLQASHLHPSSFSSDDFLDQILSSIPLPW 60
           MRLTNSLPDLH++RRN P ETDASQLHHH + LQ S  HPS+FSSDDFLDQILS++P PW
Sbjct: 1   MRLTNSLPDLHTHRRNPPQETDASQLHHHHHQLQTSLFHPSTFSSDDFLDQILSTVPSPW 60

Query: 61  ELPTGLPNPHSNLPPQPPQLPRNPDNAAFQIGDTTPAAKMAMAMLHQQLL--------TT 120
           ELP GLP+         P  P NPDN  F +GDTTPAAKMAM++L QQLL        + 
Sbjct: 61  ELPPGLPS--------QPLPPSNPDNVEFHVGDTTPAAKMAMSLLQQQLLMSRGIVPASA 120

Query: 121 AADSSLLTLPGNDVVEVEG--SSSFKCPNPIIVDGSVNPSLFNEFTGFLNASGSSHSHTL 180
             D  LL +PGN+VVEV+G  SSSFKCPNP    GSV PSLFNEF GFLN++G   S   
Sbjct: 121 GDDCGLLPMPGNNVVEVDGSSSSSFKCPNP-TDHGSVVPSLFNEFAGFLNSTGPG-SQNQ 180

Query: 181 NQSQGNSTSTSQTQSFGAPVSANTPPPVGTGSGGGASAAA---QPRQRVRARRGQATDPH 240
           NQSQGN  S SQ  +FG PVSA+TPPP G  S GGA+AAA   QPRQRVRARRGQATDPH
Sbjct: 181 NQSQGN--SNSQIPNFGGPVSASTPPPAGPSSCGGAAAAAAPGQPRQRVRARRGQATDPH 240

Query: 241 SIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAT 300
           SIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLS+SRLGGAT
Sbjct: 241 SIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSVSRLGGAT 300

Query: 301 ASMPSQLVADMSSHSEGGIH-NQSNGTGGAAGQTFAGAPASNDTMTVTEHQVVKLMEKDM 360
           A+MPS+L  D+S  +EGG   NQSNGT GA+GQT  GAP+SND MTVTEHQVVKLME+DM
Sbjct: 301 AAMPSRL-PDLS--TEGGTECNQSNGTNGASGQTSTGAPSSNDAMTVTEHQVVKLMEEDM 360

Query: 361 GSAMQYLQGKGLCLMPISLATAISTATCHSRPVTASRGGGDRPTSPSLSALTVQSTALRN 419
           GSAMQYLQGKGLCLMPISLATAISTATCHSRP+TAS+GGGD PTSPSLSALTVQSTAL N
Sbjct: 361 GSAMQYLQGKGLCLMPISLATAISTATCHSRPITASKGGGDPPTSPSLSALTVQSTALGN 420

[Close]

BLAST of CmoCh12G011740 vs. TAIR 10
Match: AT2G24260.1 (LJRHL1-like 1 )

HSP 1 Score: 233.0 bits (593), Expect = 4.3e-61
Identity = 156/273 (57.14%), Postives = 183/273 (67.03%), Query Frame = 0


Query: 144 DGSVNPSLFNEFTGFLNASGSSHSHTLNQSQGNSTSTSQTQSFGAPVSANTPPPVGTGSG 203
           DGS   +L+N F    + +GS  +  + Q  G      Q Q+              T +G
Sbjct: 73  DGSSVHALYNGF----SVAGSLPNFQIPQGSGGGLMNQQGQT---QTQTQPQASASTATG 132

Query: 204 GGASAAAQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDE 263
           G  +A  Q R ++RARRGQATDPHSIAERLRRERIAERMKALQELVPN NKTDKASMLDE
Sbjct: 133 GTVAAPPQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDE 192

Query: 264 IIDYVKFLQLQVKVLSMSRLGGATASMPSQLVADMSSHSEGGIHNQSNGTGGAAGQTFAG 323
           IIDYVKFLQLQVKVLSMSRLGGA AS+ SQ+         GG H  ++       QT   
Sbjct: 193 IIDYVKFLQLQVKVLSMSRLGGA-ASVSSQI------SEAGGSHGNASSAMVGGSQT--- 252

Query: 324 APASNDTMTVTEHQVVKLMEKDMGSAMQYLQGKGLCLMPISLATAISTATCHSR----PV 383
           A  SND++T+TEHQV KLME+DMGSAMQYLQGKGLCLMPISLATAISTATCHSR    P 
Sbjct: 253 AGNSNDSVTMTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISTATCHSRNPLIPG 312

Query: 384 TASRGGGDRPTSPSLSALTVQSTALRNGTVKDK 413
             +  GG  P+ P+LS +T+QST+ + G+   K
Sbjct: 313 AVADVGG--PSPPNLSGMTIQSTSTKMGSGNGK 326

[Close]

BLAST of CmoCh12G011740 vs. TAIR 10
Match: AT4G30980.1 (LJRHL1-like 2 )

HSP 1 Score: 215.7 bits (548), Expect = 7.1e-56
Identity = 161/275 (58.55%), Postives = 177/275 (64.36%), Query Frame = 0


Query: 148 NPSLFNEFTGFLNASGSSHSHTLNQSQGNSTSTSQTQSFGAPVSANTPPPVGTGSGGGAS 207
           N +LFN F     ++GS   H L Q  G  T   QTQS  A  SA T         GGA+
Sbjct: 81  NDALFNGF-----STGSLPFH-LPQGSGGQT---QTQS-QATASATT---------GGAT 140

Query: 208 AAAQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDY 267
           A  Q + +VRARRGQATDPHSIAERLRRERIAERMK+LQELVPN NKTDKASMLDEIIDY
Sbjct: 141 AQPQTKPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDY 200

Query: 268 VKFLQLQVKVLSMSRLGGATASMPSQLVADMSSHSEGGIHNQSNGTGGAAGQTFAGAPAS 327
           VKFLQLQVKVLSMSRLGGA AS  SQ+     S   GG H  ++ +G A           
Sbjct: 201 VKFLQLQVKVLSMSRLGGA-ASASSQI-----SEDAGGSHENTSSSGEA----------- 260

Query: 328 NDTMTVTEHQVVKLMEKDMGSAMQYLQGKGLCLMPISLATAISTATCHSRPVTASRGGGD 387
                +TEHQV KLME+DMGSAMQYLQGKGLCLMPISLAT ISTATC SR       G  
Sbjct: 261 ----KMTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATTISTATCPSRSPFVKDTG-- 310

Query: 388 RPTSPSLSALTVQSTALRNG----TVKDKASISRP 419
            P SP+LS   V   A  NG    TVKD  S+S+P
Sbjct: 321 VPLSPNLSTTIV---ANGNGSSLVTVKDAPSVSKP 310

[Close]

BLAST of CmoCh12G011740 vs. TAIR 10
Match: AT5G58010.1 (LJRHL1-like 3 )

HSP 1 Score: 193.7 bits (491), Expect = 2.9e-49
Identity = 128/218 (58.72%), Postives = 155/218 (71.10%), Query Frame = 0


Query: 197 PVGTGSGGGASAAAQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTD 256
           P GT S   A    Q + RVRARRGQATDPHSIAERLRRERIAERMK+LQELVPN NKTD
Sbjct: 81  PQGTVSTTSAPVVRQ-KPRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKTD 140

Query: 257 KASMLDEIIDYVKFLQLQVKVLSMSRLGGATASMPSQLVADMSSHSEGGIH------NQS 316
           KASMLDEII+YV+FLQLQVKVLSMSRLGGA +  P   +  +S+ + G ++      N  
Sbjct: 141 KASMLDEIIEYVRFLQLQVKVLSMSRLGGAGSVGPR--LNGLSAEAGGRLNALTAPCNGL 200

Query: 317 NGTGGAAGQTFAGAPASNDTMTVTEHQVVKLMEKDMGSAMQYLQGKGLCLMPISLATAIS 376
           NG G A G       +SN+++  TE +V KLME+DMGSAMQYLQGKGLCLMPISLATAIS
Sbjct: 201 NGNGNATG-------SSNESLRSTEQRVAKLMEEDMGSAMQYLQGKGLCLMPISLATAIS 260

Query: 377 TATCHSR-----PVTASRGGGD-RPTSPSLSALTVQST 403
           ++T HSR     P++++    D   T+ +++A    ST
Sbjct: 261 SSTTHSRGSLFNPISSAVAAEDSNVTATAVAAPEASST 288

[Close]

BLAST of CmoCh12G011740 vs. TAIR 10
Match: AT4G02590.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 159.8 bits (403), Expect = 4.6e-39
Identity = 124/231 (53.68%), Postives = 141/231 (61.04%), Query Frame = 0


Query: 157 GFLNASG--SSHSHTLNQSQGNSTSTSQTQSFGAPVSANTPPPVGTGSGGGASAAAQP-- 216
           GFL   G   S     +    N  S+ +    G P+    PPP         SA  QP  
Sbjct: 93  GFLRPEGGHGSGKRFSDDVVDNRCSSMKPVFHGQPM--QQPPP---------SAPHQPTS 152

Query: 217 -RQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFL 276
            R RVRARRGQATDPHSIAERLRRERIAER++ALQELVP  NKTD+A+M+DEI+DYVKFL
Sbjct: 153 IRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKTDRAAMIDEIVDYVKFL 212

Query: 277 QLQVKVLSMSRLGGATASMPSQLVADMSSHSEGGIHNQSNGTGGAAGQTFAGAPASNDTM 336
           +LQVKVLSMSRLGGA A  P  LV DM   S         G GG   Q  A    SND  
Sbjct: 213 RLQVKVLSMSRLGGAGAVAP--LVTDMPLSSS---VEDETGEGGRTPQP-AWEKWSNDG- 272

Query: 337 TVTEHQVVKLMEKDMGSAMQYLQGKGLCLMPISLATAISTATCHSRPVTAS 383
             TE QV KLME+++G+AMQ LQ K LC+MPISLA AI     HS+P   S
Sbjct: 273 --TERQVAKLMEENVGAAMQLLQSKALCMMPISLAMAI----YHSQPPDTS 299

[Close]

BLAST of CmoCh12G011740 vs. TAIR 10
Match: AT4G02590.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 159.8 bits (403), Expect = 4.6e-39
Identity = 124/231 (53.68%), Postives = 141/231 (61.04%), Query Frame = 0


Query: 157 GFLNASG--SSHSHTLNQSQGNSTSTSQTQSFGAPVSANTPPPVGTGSGGGASAAAQP-- 216
           GFL   G   S     +    N  S+ +    G P+    PPP         SA  QP  
Sbjct: 93  GFLRPEGGHGSGKRFSDDVVDNRCSSMKPVFHGQPM--QQPPP---------SAPHQPTS 152

Query: 217 -RQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFL 276
            R RVRARRGQATDPHSIAERLRRERIAER++ALQELVP  NKTD+A+M+DEI+DYVKFL
Sbjct: 153 IRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKTDRAAMIDEIVDYVKFL 212

Query: 277 QLQVKVLSMSRLGGATASMPSQLVADMSSHSEGGIHNQSNGTGGAAGQTFAGAPASNDTM 336
           +LQVKVLSMSRLGGA A  P  LV DM   S         G GG   Q  A    SND  
Sbjct: 213 RLQVKVLSMSRLGGAGAVAP--LVTDMPLSSS---VEDETGEGGRTPQP-AWEKWSNDG- 272

Query: 337 TVTEHQVVKLMEKDMGSAMQYLQGKGLCLMPISLATAISTATCHSRPVTAS 383
             TE QV KLME+++G+AMQ LQ K LC+MPISLA AI     HS+P   S
Sbjct: 273 --TERQVAKLMEENVGAAMQLLQSKALCMMPISLAMAI----YHSQPPDTS 299

The following BLAST results are available for this feature:

BLAST of CmoCh12G011740 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
D0PX88	9.9e-79	52.04	bHLH transcription factor RHL1 OS=Lotus japonicus OX=34305 GN=RHL1 PE=2 SV=1	[more]
Q9ZUG9	6.0e-60	57.14	Transcription factor LRL1 OS=Arabidopsis thaliana OX=3702 GN=LRL1 PE=1 SV=1	[more]
Q8S3D5	1.0e-54	58.55	Transcription factor LRL2 OS=Arabidopsis thaliana OX=3702 GN=LRL2 PE=2 SV=2	[more]
Q9LSQ3	4.1e-48	58.72	Transcription factor LRL3 OS=Arabidopsis thaliana OX=3702 GN=LRL3 PE=2 SV=1	[more]
O22768	6.5e-38	53.68	Transcription factor UNE12 OS=Arabidopsis thaliana OX=3702 GN=UNE12 PE=1 SV=2	[more]

BLAST of CmoCh12G011740 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FBH4	2.8e-225	100.00	transcription factor bHLH69-like OS=Cucurbita moschata OX=3662 GN=LOC111444106 P...	[more]
A0A6J1HL74	1.4e-208	94.27	transcription factor bHLH69-like OS=Cucurbita maxima OX=3661 GN=LOC111465560 PE=...	[more]
A0A6J1G4B7	3.6e-156	76.40	transcription factor bHLH69-like OS=Cucurbita moschata OX=3662 GN=LOC111450664 P...	[more]
A0A6J1KH22	1.8e-155	75.99	transcription factor bHLH69-like OS=Cucurbita maxima OX=3661 GN=LOC111493801 PE=...	[more]
A0A0A0LFE4	1.0e-150	73.39	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G009480 PE=4 S...	[more]

BLAST of CmoCh12G011740 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G24260.1	4.3e-61	57.14	LJRHL1-like 1	[more]
AT4G30980.1	7.1e-56	58.55	LJRHL1-like 2	[more]
AT5G58010.1	2.9e-49	58.72	LJRHL1-like 3	[more]
AT4G02590.1	4.6e-39	53.68	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G02590.2	4.6e-39	53.68	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 228..277 e-value: 1.5E-13 score: 61.0
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 227..272 e-value: 1.5E-9 score: 37.7
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 222..271 score: 17.389959
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 217..279 e-value: 1.5E-15 score: 58.8
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 220..281
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 386..418
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..39
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 300..329
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 13..27
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 377..418
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 163..227
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 163..200
None	No IPR available	PANTHER	PTHR16223:SF120	TRANSCRIPTION FACTOR BHLH69	coord: 40..382
None	No IPR available	PANTHER	PTHR16223	TRANSCRIPTION FACTOR BHLH83-RELATED	coord: 40..382

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh12G011740.1	CmoCh12G011740.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding