CmoCh12G011710 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh12G011710
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Biotin carboxyl carrier protein of acetyl-CoA carboxylase
Location	Cmo_Chr12: 10598521 .. 10604073 (-)
RNA-Seq Expression	CmoCh12G011710
Synteny	CmoCh12G011710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTAAGAAGAGGAGCCGGTTGGTTCGAGTAAGAGGGCAGCAAAGGGCGAGTGAGAGAGCGACTTAATCTCATCTTCCACTCGCCCGTCTCATTGGTTTCATCGACGTCCCACCCTCTTCCACCCGCCCCCTGCAACTCCCTCCTCTTTCCTTCATCCCCCCATTGACGGACCCTCCTAAGCTCTCTCTCTTGAAACCCAATGGCTTCCTCGGTCACTTCAGCTTCAGCAGTGGCAAACCCCACCTGCCCATCTCTTGCTCGCCGCTGTATCAACCACAAGAGCTCTCATTGCGCCTTGTCTTTTCCACTCCCCCACAACCCCAAACTCAGAATCTTCACCAGGGTATGTGCTAATTTCTGCCAATTCTAGTCGTTTTTTGTGTTGGGTTTCGATTTATGACTGTCCTGGTCTGTGAATTTGTGGGTTTCTTTTGAATTCGTTGGTGGGTTAATGTATACTTGCTGCTAATTGGGTTTGTGACTGGAAGACTGTTCTTGGAGGATTCTTTTGGAAAGGGATTTAAAAGAATGAAAGAGAATCGTAGATTAAATGCATATGATTTGAGGGGTAAAATTACTGGAAATGTGTACAAAACCAAATCCTACAACTTCTGCAATGGTTTGTAGTTTGAGAACAGAAGCAAGGATACGATCAGAAGCTCCCAAAGCATTAAAAGGTGTGGAAATACTTATGGATAGAAAGGGGAAGTGGGACCTTTTGAGTAGCCATTAAAAAGACTATAATTAGTGATAAGTTAGTAAGTAGTTCTGAGTATTTTGTACTTTCTTTCCCTGAATTTCCACAGTTAAGTAGAGTTGATTTATCTCTATCTATTGTCTATATGGGTTCAAATCTCCACGTCTGTTGTGGGTTTTAGGTTGTGAGATTCCACATTGGTTGGAGAGGGGAGCGAAACATTTCTTATAAGAGTGTGGAAACCTCTCCCTAGGAGATGCGATTTAAAATCGTGAGGCTGACGGCGGTACATAAGGGCCAAAGTGGATAATATCTGCTAATGGTGGACTTGGGCTGTTACAAATGGTATCAGAGACAAACAACGAGCAGTGTGCCAGCGATGACGCTGGGTCCCCAAGGGGGTGGATTGTAAGATCTCACATAAGTTGGAGAGGGGAACGAAACATTCTTTATAAAGGGTGTGAAAACCTCTCCCTAGCAAATGTGTTTTAAAACCGTGAGGCTGACGACGATACGTAACGAGCCAAAGTGGACAATATCTGCTAGTGGTGAGCTTAGGCTGTTGCAGATGGTATTAGAGCTAGACACCGGGCCCTGTGCTAGCGAGGACGCTGGGCCTCCGTGTGTGTGGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGTAGATTGTGAGATTCCACATCGGTTGGAGAAGGAAACGAAGCATTCCTTATAAGGGTGTGGAAACCTCTCCCTAGGAGATGCGTTTTAAAGCCGTGAGGCTGACAGCGATACGTAATGGGTCAAAGCGAATAATATCTGCTAGCGGTGAGCTTAGGCTGTTACATATGGTATTAGAGCCAGACACCGAGTGTTGTGCCAGCAAGGACACTAGCCCCTATGGGGGTGGATTGTGAGATTTCACATCGGTTGGAGAGGGAAACAAAACATTTTTTTATAAAGGGTGTGGAAACCTCTCCCTAGCAGATGCGTTTTAAAATCGTGAGACTGACGGCGATACATAACGGGCCAAAGCGGACAATATCTGCTAGCAGTGAGCTTAGGCTGTTACAGATAGTATCAGAGCCAGACACTGGTCGCTGTGCCAGCAAGGACGCTCAGGGGGTGGATTGTAAGATTTCACATCGATTGTAGAGGAGAACGAAGCATTCCTTATAAAGATGTGGAGACCTCTCCCTAGCGGTGGGCTTGGACTGTTACATAGGTAGTACAACCAATAAAGTTAATAATAGATGGCTCTCTTGGTAACCATAAGGTTCATAACTTATTGAAAACTCAAGATGCAATTGTACAACTTATAGAACTATACCATTTCAGCTAGAACCCTATTTTCGATACCATACCGATAACTCTTTGTCGTGATTATGCATGTGATATAAGCGCTACGTCGCAGGGCGTGCAGCCTGTTCGTAAGCATTCAACTCTCATACAAGCACAATTAAATGAGGTATGTATGCTTATATGAAAGCTTTATTACAAAAGCATTTTCTTTGTTCAAGTATTGACTCCTTCCTAACTTGCTGTTCTTCAAGTCGTCCATTTCATTGAAGGATACTATTGATGGAAGTGCTAAATCATTGAGTGATGAATCTTCTAAACCTTTGGCAACGGAAGAATCAATCTCTGAGTTCATTACTCAAGTTTCAAGCCTTATCAAGTTAGCTAGCTCAATCACTGAACTTTTCCTCTACATATGGCTATGGTTTAACATGTGTCTCCCCACTTGCAGGCTTGTCGATTCAAGAGACATTGTCGAGTTACAATTGAAACAGCTCGACTGCGAAGTGACGATTCGTAAAAAGGAGGCCTTACCTCAAGCACCACCTCCTGCTGCTGTTCCTATGATGTATGCGTCCCCGCCCTCGCCCTCTCCGTCGGTAGCACCACCAGCTCCTGCCCCTGTGTCTGGTCCTGCTGCACTACCAGCACCTGCTTCTCCAGTTTCAAGCTTACCATCTTCACCTCCTGCTGCCAAGTCAACCAGTTCGTCTCTTCCACCTCTCAAATGCCCTATGGCAGGCACGTTCTACCGTAGTCCCGGGCCTGGAGAACCACCGTTTGTTAAGGTAAAATTCTTTCGTATAGTAAATGGTATTTCGTAAATCTTTCATTGGAGCTTTTTTTGAGGAGTTCTTCTTATAGGTTGGAGATAAAGTACAGAAGGGACAAATCTTATGCATCATTGAGGCTATGAAATTAATGAACGAAATAGAGGTAAGATTTTCTCTCTTTATACGTTTAGATCTTTGAATGTGAAACATTATGTTGAAGTTTATCATCCATATGGAGCATTGCTATCTCCTTTGTCTTCCCTTTAGTTTGATATCATGTTCTTCGTTTGAGTTGCTAACAGTATATTCCTTACTTTCCATAGTATTGTCTACTGATGTGGGTGTATGTTCGAAACAGTATTGGATTTACATAAACTGAAAATTTTACTGTTTATAATATAGCCTGATTATGGGTGAAACAAACCTCTGATTCTCCTATGTAGTAAACAATTACCTGTCTTGTCTTGTGTCTTGTTATGTTTCAAAGAATATGGATGCGACTGAATCTTAGGAAAGACGGAGTAATAATTCTTGTAGCTCACCGCTAGCAAATATTGTCCTCTTGGGCTTTCCTTCAAAGGTTTTTAAAACGTGTATGCTAGGGAGAGGTTTCCACACCTTTATAAAGAATGATTTGTTCTTCTCTCCAACCGATGTGAGATCTCACAATCCACTCCCCTTCGGGGCTCAGCGCCATTGCTGGCACTTGTTCCTCTCTCCAATCAATGTGGGATCTCACAATCCACCCCCCTTGGGGTCCAGCGTCTTTGCTGGCACACCGCTTGGTGTCTGGCTTTGATACCATTTGTAACACCCTAGGTCCACCGCTAGCAGATATTGTCTTCTTTGGGCTTTTCCTTTCGGTTTTTCCCTCAAGGTTTTTAAAATGCGTATGCTAGGGAGAGGTTTTCACACTCTTATAAAAAATGCTTCGTTCCCCTCTCCAACTAATGTGGGATCTCACAATCCATCCCCTTCAGGGCCCTGCATCCTTGTTGGCACTTGTTCCTCTCTCCAATCGATGTGGGATCTCCCAATCCACCTCCCCTTAGGGGCCTAGCGTCCTCACTGGCACACCGCCCAGTGTCTAGCTCTGATACCATTTGTAACACCTGAAGCCCACTACAAATAAATATTGTCCTCATTGGACTTTCCCATTTGGGTTTCCCCTCGAAGGTTTTTAAAACACGTCTGCTAGAGAGGTTTCCACACCCTTATAAAGAATGTTTTGTTCCCCTATCCAACCGATGTGGGGTCTCACAATCCACCCCCTTTGGGGGCCAGGGTCCCTCGTTGACACTCGTTCCTCTCTTCAATCGATATGGGATCTCACAATCCACCCCTCCCCACTTTGGGGCCCAACGTCCTCGTTGGCACACCGCCCGGTGTCTGGCTTTGATACCATTTGTAACATCCTAAGCCCACCACTAGCAAATATTGTCCTCTTTGGCCTTTTCCTTTCGAGCTTCCCCTTAAGGTTTTTAAAACACGTCTGCTAGAGAGGAGTTTCCACACCTTTATAAAAAATGTCTCGTTCCCCCTTTCCAATCGATGTGAGGTCTCACAATTCCATTAATTATGAGTTAACATTGAACAAATTCAGATCTTACCCACTATGGTTTGTTTCTTACTCTTTCCATTAGGACTATTTACCCCTGAGGATATGTGTATCAGTAGTAAATCCCCTATTATTACTGCCTAAATTTCCTATGACAGACATATTGAGTTTAAGTCATATAGAGGTAAATCTCCATGCATAATGTCGTCTGGTGGCAGCTACCCAGATCATTTGTTTCAGTCAAACAAACTGGCTAATGTCTGCTCTTCCAATTTTATGGGATGTCTCTGTAGGGACGACTAATGTCTTCTCTTAAAAACATTTAATTCTCAGGCCGATCAATCAGGGACCATAGTCGAGGTTATTGCAGAGGACGGGAAGCCCGTTAGTGTCGACACGGTAAGTAGTTCTAACCATTAAAGTTATTGTAATGGATGGATAAACTGTTTCCTTATGGTCTTGTATTTTGTTGTGGTTTCTTTGCAGCCTTTGTTTTGCATTCAACCTTAGATGAATCCTGTTTCGTTTAACACGAGTCGAGTTAAGCTGAGTTTGGGAGGCAAATTGAGTTTCCAAGCAAGTTCGGGTTGTGGATTAGTTATGGTAATGTCTTCTTTTCTCTTTAATTGAGTGTAATCAGAGAGAGATTGTGTTCATAAATGACAATTCCTTTTCCAGTTTAACTTTGGTTGTGAAATCAGAT

mRNA sequence

CTAAGAAGAGGAGCCGGTTGGTTCGAGTAAGAGGGCAGCAAAGGGCGAGTGAGAGAGCGACTTAATCTCATCTTCCACTCGCCCGTCTCATTGGTTTCATCGACGTCCCACCCTCTTCCACCCGCCCCCTGCAACTCCCTCCTCTTTCCTTCATCCCCCCATTGACGGACCCTCCTAAGCTCTCTCTCTTGAAACCCAATGGCTTCCTCGGTCACTTCAGCTTCAGCAGTGGCAAACCCCACCTGCCCATCTCTTGCTCGCCGCTGTATCAACCACAAGAGCTCTCATTGCGCCTTGTCTTTTCCACTCCCCCACAACCCCAAACTCAGAATCTTCACCAGGGGCGTGCAGCCTGTTCGTAAGCATTCAACTCTCATACAAGCACAATTAAATGAGTCGTCCATTTCATTGAAGGATACTATTGATGGAAGTGCTAAATCATTGAGTGATGAATCTTCTAAACCTTTGGCAACGGAAGAATCAATCTCTGAGTTCATTACTCAAGTTTCAAGCCTTATCAAGCTTGTCGATTCAAGAGACATTGTCGAGTTACAATTGAAACAGCTCGACTGCGAAGTGACGATTCGTAAAAAGGAGGCCTTACCTCAAGCACCACCTCCTGCTGCTGTTCCTATGATGTATGCGTCCCCGCCCTCGCCCTCTCCGTCGGTAGCACCACCAGCTCCTGCCCCTGTGTCTGGTCCTGCTGCACTACCAGCACCTGCTTCTCCAGTTTCAAGCTTACCATCTTCACCTCCTGCTGCCAAGTCAACCAGTTCGTCTCTTCCACCTCTCAAATGCCCTATGGCAGGCACGTTCTACCGTAGTCCCGGGCCTGGAGAACCACCGTTTGTTAAGGTTGGAGATAAAGTACAGAAGGGACAAATCTTATGCATCATTGAGGCTATGAAATTAATGAACGAAATAGAGGCCGATCAATCAGGGACCATAGTCGAGGTTATTGCAGAGGACGGGAAGCCCGTTAGTGTCGACACGCCTTTGTTTTGCATTCAACCTTAGATGAATCCTGTTTCGTTTAACACGAGTCGAGTTAAGCTGAGTTTGGGAGGCAAATTGAGTTTCCAAGCAAGTTCGGGTTGTGGATTAGTTATGGTAATGTCTTCTTTTCTCTTTAATTGAGTGTAATCAGAGAGAGATTGTGTTCATAAATGACAATTCCTTTTCCAGTTTAACTTTGGTTGTGAAATCAGAT

Coding sequence (CDS)

ATGGCTTCCTCGGTCACTTCAGCTTCAGCAGTGGCAAACCCCACCTGCCCATCTCTTGCTCGCCGCTGTATCAACCACAAGAGCTCTCATTGCGCCTTGTCTTTTCCACTCCCCCACAACCCCAAACTCAGAATCTTCACCAGGGGCGTGCAGCCTGTTCGTAAGCATTCAACTCTCATACAAGCACAATTAAATGAGTCGTCCATTTCATTGAAGGATACTATTGATGGAAGTGCTAAATCATTGAGTGATGAATCTTCTAAACCTTTGGCAACGGAAGAATCAATCTCTGAGTTCATTACTCAAGTTTCAAGCCTTATCAAGCTTGTCGATTCAAGAGACATTGTCGAGTTACAATTGAAACAGCTCGACTGCGAAGTGACGATTCGTAAAAAGGAGGCCTTACCTCAAGCACCACCTCCTGCTGCTGTTCCTATGATGTATGCGTCCCCGCCCTCGCCCTCTCCGTCGGTAGCACCACCAGCTCCTGCCCCTGTGTCTGGTCCTGCTGCACTACCAGCACCTGCTTCTCCAGTTTCAAGCTTACCATCTTCACCTCCTGCTGCCAAGTCAACCAGTTCGTCTCTTCCACCTCTCAAATGCCCTATGGCAGGCACGTTCTACCGTAGTCCCGGGCCTGGAGAACCACCGTTTGTTAAGGTTGGAGATAAAGTACAGAAGGGACAAATCTTATGCATCATTGAGGCTATGAAATTAATGAACGAAATAGAGGCCGATCAATCAGGGACCATAGTCGAGGTTATTGCAGAGGACGGGAAGCCCGTTAGTGTCGACACGCCTTTGTTTTGCATTCAACCTTAG

Protein sequence

MASSVTSASAVANPTCPSLARRCINHKSSHCALSFPLPHNPKLRIFTRGVQPVRKHSTLIQAQLNESSISLKDTIDGSAKSLSDESSKPLATEESISEFITQVSSLIKLVDSRDIVELQLKQLDCEVTIRKKEALPQAPPPAAVPMMYASPPSPSPSVAPPAPAPVSGPAALPAPASPVSSLPSSPPAAKSTSSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVQKGQILCIIEAMKLMNEIEADQSGTIVEVIAEDGKPVSVDTPLFCIQP

Homology

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BLAST of CmoCh12G011710 vs. ExPASy Swiss-Prot
Match: Q42783 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplastic OS=Glycine max OX=3847 GN=ACCB-1 PE=1 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 3.9e-60
Identity = 159/284 (55.99%), Postives = 189/284 (66.55%), Query Frame = 0


Query: 1   MASSVTSASAVANPTCPSLARRCINHKSSHCALSFPLPHNPKLRIFTRGVQPVRKHSTLI 60
           MASS+  A+  A            N + +H     P P+N  LR  T+    +    T +
Sbjct: 1   MASSLAPATKAAT-----------NLRLTHSLRFSPKPNN--LRFATKPGNTLL--CTRV 60

Query: 61  QAQLNESSI-----------SLKDTIDGSAKSLSDESSKPLATEESISEFITQVSSLIKL 120
           +AQLNE ++             K   +  AK L++ SS  LAT+ES+S+FITQV+SL+KL
Sbjct: 61  KAQLNEVALDSSSNATSPPMKAKSKEEPPAKPLAEPSSSVLATQESVSQFITQVASLVKL 120

Query: 121 VDSRDIVELQLKQLDCEVTIRKKEALPQAPPPAAVPMMYASPPSPSPSVAPPAPAPVSGP 180
           VDSRDIVEL+LKQ D EVTIRKKEA+PQ PPPA  P +  SPP P+    PP P P S P
Sbjct: 121 VDSRDIVELKLKQHDVEVTIRKKEAMPQ-PPPAPQPSVVYSPPPPA---LPPPPVPASTP 180

Query: 181 AALPAPASPVSSLPSSPPAAKSTSSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVQKGQ 240
           A   A A+P    P+S PA KS  SSLPPLK PMAGTFYRSP PGEP FVKVGDKV+KGQ
Sbjct: 181 APTLARATPT---PTSAPAVKSAKSSLPPLKSPMAGTFYRSPAPGEPSFVKVGDKVKKGQ 240

Query: 241 ILCIIEAMKLMNEIEADQSGTIVEVIAEDGKPVSVDTPLFCIQP 274
           ++CIIEAMKLMNEIEADQSGTIVE++AED K VSVDTPLF IQP
Sbjct: 241 VVCIIEAMKLMNEIEADQSGTIVEIVAEDAKSVSVDTPLFVIQP 262

[Close]

BLAST of CmoCh12G011710 vs. ExPASy Swiss-Prot
Match: Q42533 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BCCP1 PE=1 SV=2)

HSP 1 Score: 228.8 bits (582), Expect = 7.4e-59
Identity = 152/283 (53.71%), Postives = 190/283 (67.14%), Query Frame = 0


Query: 4   SVTSASAVANPTCPSLARRCINHKSSHCALSFPLPHNPKLRIFTRGVQPVRKHSTLIQAQ 63
           SVTS +A A+    +        ++    +SF L   PKLR  ++   P R    +++AQ
Sbjct: 7   SVTSPAAAASVYAVTQTSSHFPIQNRSRRVSFRLSAKPKLRFLSK---PSRSSYPVVKAQ 66

Query: 64  LNESSISLKDT---IDGSAKSLSDE---------SSKPLATEESISEFITQVSSLIKLVD 123
            N+ S         +DG + +   E         SS  LATEESISEF+TQV++L+KLVD
Sbjct: 67  SNKVSTGASSNAAKVDGPSSAEGKEKNSLKESSASSPELATEESISEFLTQVTTLVKLVD 126

Query: 124 SRDIVELQLKQLDCEVTIRKKEALPQAPPPAA-VPMMYASPPSPSPSVAPPAPAPVSGPA 183
           SRDIVELQLKQLDCE+ IRKKEALPQ   PA+ V M   + PS +  +APPA AP    A
Sbjct: 127 SRDIVELQLKQLDCELVIRKKEALPQPQAPASYVMMQQPNQPSYAQQMAPPA-APA---A 186

Query: 184 ALPAPASPVSSLPSSPPAAKSTSSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVQKGQI 243
           A PAP++P S  P SPP      SSLP +K PMAGTFYRSP PGEPPF+KVGDKVQKGQ+
Sbjct: 187 AAPAPSTPASLPPPSPPT--PAKSSLPTVKSPMAGTFYRSPAPGEPPFIKVGDKVQKGQV 246

Query: 244 LCIIEAMKLMNEIEADQSGTIVEVIAEDGKPVSVDTPLFCIQP 274
           LCI+EAMKLMNEIE+D +GT+V+++AEDGKPVS+DTPLF +QP
Sbjct: 247 LCIVEAMKLMNEIESDHTGTVVDIVAEDGKPVSLDTPLFVVQP 280

[Close]

BLAST of CmoCh12G011710 vs. ExPASy Swiss-Prot
Match: Q9LLC1 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BCCP2 PE=1 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 1.4e-49
Identity = 126/220 (57.27%), Postives = 158/220 (71.82%), Query Frame = 0


Query: 54  RKHSTLIQAQLNESSISLKDTIDGSAKSLSDESSKPLATEESISEFITQVSSLIKLVDSR 113
           R  +T  +   N + ++    ++G AK+   E ++       +SEF+ +VS L+KLVDS+
Sbjct: 51  RLRATTNEVVSNSTPMTNGGYMNGKAKTNVPEPAE-------LSEFMAKVSGLLKLVDSK 110

Query: 114 DIVELQLKQLDCEVTIRKKEALPQAPPPAAVPMMYASPPSPSPSVAPPAPAPVSGPAALP 173
           DIVEL+LKQLDCE+ IRKKEAL QA PPA  P+ ++ PP  +    PPA      P ALP
Sbjct: 111 DIVELELKQLDCEIVIRKKEALQQAVPPA--PVYHSMPPVMADFSMPPAQ-----PVALP 170

Query: 174 APASPVSSLPSSPPAAKSTSSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVQKGQILCI 233
              +P S+ P++     + SSS PPLK PMAGTFYRSPGPGEPPFVKVGDKVQKGQI+CI
Sbjct: 171 PSPTPTST-PATAKPTSAPSSSHPPLKSPMAGTFYRSPGPGEPPFVKVGDKVQKGQIVCI 230

Query: 234 IEAMKLMNEIEADQSGTIVEVIAEDGKPVSVDTPLFCIQP 274
           IEAMKLMNEIEA++SGTI+E++AEDGKPVSVDTPLF I P
Sbjct: 231 IEAMKLMNEIEAEKSGTIMELLAEDGKPVSVDTPLFVIAP 255

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BLAST of CmoCh12G011710 vs. ExPASy Swiss-Prot
Match: Q06881 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=accB PE=1 SV=2)

HSP 1 Score: 102.4 bits (254), Expect = 8.0e-21
Identity = 72/176 (40.91%), Postives = 103/176 (58.52%), Query Frame = 0


Query: 102 QVSSLIKLVDSRDIVELQLKQLDCEVTIRKKEALPQAPPPAAVP----MMYASPPSPSPS 161
           ++  L+  +   DI E+ LK  D E+T+RK   +  +  P        ++ +  PS  P 
Sbjct: 7   EIRQLLTTIAQTDIAEVTLKSDDFELTVRKAVGVNNSVVPVVTAPLSGVVGSGLPSAIPI 66

Query: 162 VAPPAPAPVSGPAALPAPASPVSSLPSSPPAAKSTSSSLPPLKCPMAGTFYRSPGPGEPP 221
           VA  AP+P   P    A    V+S   S P AK     L  +  PM GTFYR+P PGE  
Sbjct: 67  VAHAAPSPSPEPGTSRAADHAVTS-SGSQPGAKIIDQKLAEVASPMVGTFYRAPAPGEAV 126

Query: 222 FVKVGDKVQKGQILCIIEAMKLMNEIEADQSGTIVEVIAEDGKPVSVDTPLFCIQP 274
           FV+VGD++++GQ +CIIEAMKLMNEIEAD SG ++E++ ++G+PV  + PL  I+P
Sbjct: 127 FVEVGDRIRQGQTVCIIEAMKLMNEIEADVSGQVIEILVQNGEPVEYNQPLMRIKP 181

[Close]

BLAST of CmoCh12G011710 vs. ExPASy Swiss-Prot
Match: P37799 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=accB PE=3 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.7e-18
Identity = 69/172 (40.12%), Postives = 99/172 (57.56%), Query Frame = 0


Query: 100 ITQVSSLIKLVDSRDIVELQLKQLDCEVTIRKKEALPQAPPPAAVPMMYASPPSPSPSVA 159
           I +V  LI+L++   I EL++++ +  V I +       P       +YA         A
Sbjct: 3   IRKVKKLIELLEESGIDELEIREGEESVRISRHSKTAAQP-------VYAQ--------A 62

Query: 160 PPAPAPVSGPAALPAPASPVSSLPSSPPAAKSTSSSLPPLKCPMAGTFYRSPGPGEPPFV 219
           P   APV+ PA  PA A+P ++   S PAA   + ++  ++ PM GTFYR+  P    FV
Sbjct: 63  PAFAAPVAAPA--PAAAAPAAAAAESAPAAPKLNGNV--VRSPMVGTFYRAASPTSANFV 122

Query: 220 KVGDKVQKGQILCIIEAMKLMNEIEADQSGTIVEVIAEDGKPVSVDTPLFCI 272
           +VG  V+KG ILCI+EAMK+MN IEA+ SGTI  ++ E+G+PV  D PLF I
Sbjct: 123 EVGQSVKKGDILCIVEAMKMMNHIEAEVSGTIESILVENGQPVEFDQPLFTI 155

[Close]

BLAST of CmoCh12G011710 vs. ExPASy TrEMBL
Match: A0A6J1FJC4 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Cucurbita moschata OX=3662 GN=LOC111444423 PE=4 SV=1)

HSP 1 Score: 503.1 bits (1294), Expect = 7.5e-139
Identity = 273/273 (100.00%), Postives = 273/273 (100.00%), Query Frame = 0


Query: 1   MASSVTSASAVANPTCPSLARRCINHKSSHCALSFPLPHNPKLRIFTRGVQPVRKHSTLI 60
           MASSVTSASAVANPTCPSLARRCINHKSSHCALSFPLPHNPKLRIFTRGVQPVRKHSTLI
Sbjct: 1   MASSVTSASAVANPTCPSLARRCINHKSSHCALSFPLPHNPKLRIFTRGVQPVRKHSTLI 60

Query: 61  QAQLNESSISLKDTIDGSAKSLSDESSKPLATEESISEFITQVSSLIKLVDSRDIVELQL 120
           QAQLNESSISLKDTIDGSAKSLSDESSKPLATEESISEFITQVSSLIKLVDSRDIVELQL
Sbjct: 61  QAQLNESSISLKDTIDGSAKSLSDESSKPLATEESISEFITQVSSLIKLVDSRDIVELQL 120

Query: 121 KQLDCEVTIRKKEALPQAPPPAAVPMMYASPPSPSPSVAPPAPAPVSGPAALPAPASPVS 180
           KQLDCEVTIRKKEALPQAPPPAAVPMMYASPPSPSPSVAPPAPAPVSGPAALPAPASPVS
Sbjct: 121 KQLDCEVTIRKKEALPQAPPPAAVPMMYASPPSPSPSVAPPAPAPVSGPAALPAPASPVS 180

Query: 181 SLPSSPPAAKSTSSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVQKGQILCIIEAMKLM 240
           SLPSSPPAAKSTSSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVQKGQILCIIEAMKLM
Sbjct: 181 SLPSSPPAAKSTSSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVQKGQILCIIEAMKLM 240

Query: 241 NEIEADQSGTIVEVIAEDGKPVSVDTPLFCIQP 274
           NEIEADQSGTIVEVIAEDGKPVSVDTPLFCIQP
Sbjct: 241 NEIEADQSGTIVEVIAEDGKPVSVDTPLFCIQP 273

[Close]

BLAST of CmoCh12G011710 vs. ExPASy TrEMBL
Match: A0A6J1FCR0 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Cucurbita moschata OX=3662 GN=LOC111444423 PE=4 SV=1)

HSP 1 Score: 487.6 bits (1254), Expect = 3.3e-134
Identity = 267/273 (97.80%), Postives = 267/273 (97.80%), Query Frame = 0


Query: 1   MASSVTSASAVANPTCPSLARRCINHKSSHCALSFPLPHNPKLRIFTRGVQPVRKHSTLI 60
           MASSVTSASAVANPTCPSLARRCINHKSSHCALSFPLPHNPKLRIFTRGVQPVRKHSTLI
Sbjct: 1   MASSVTSASAVANPTCPSLARRCINHKSSHCALSFPLPHNPKLRIFTRGVQPVRKHSTLI 60

Query: 61  QAQLNESSISLKDTIDGSAKSLSDESSKPLATEESISEFITQVSSLIKLVDSRDIVELQL 120
           QAQLNE      DTIDGSAKSLSDESSKPLATEESISEFITQVSSLIKLVDSRDIVELQL
Sbjct: 61  QAQLNE------DTIDGSAKSLSDESSKPLATEESISEFITQVSSLIKLVDSRDIVELQL 120

Query: 121 KQLDCEVTIRKKEALPQAPPPAAVPMMYASPPSPSPSVAPPAPAPVSGPAALPAPASPVS 180
           KQLDCEVTIRKKEALPQAPPPAAVPMMYASPPSPSPSVAPPAPAPVSGPAALPAPASPVS
Sbjct: 121 KQLDCEVTIRKKEALPQAPPPAAVPMMYASPPSPSPSVAPPAPAPVSGPAALPAPASPVS 180

Query: 181 SLPSSPPAAKSTSSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVQKGQILCIIEAMKLM 240
           SLPSSPPAAKSTSSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVQKGQILCIIEAMKLM
Sbjct: 181 SLPSSPPAAKSTSSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVQKGQILCIIEAMKLM 240

Query: 241 NEIEADQSGTIVEVIAEDGKPVSVDTPLFCIQP 274
           NEIEADQSGTIVEVIAEDGKPVSVDTPLFCIQP
Sbjct: 241 NEIEADQSGTIVEVIAEDGKPVSVDTPLFCIQP 267

[Close]

BLAST of CmoCh12G011710 vs. ExPASy TrEMBL
Match: A0A6J1HMV9 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Cucurbita maxima OX=3661 GN=LOC111465633 PE=4 SV=1)

HSP 1 Score: 469.2 bits (1206), Expect = 1.2e-128
Identity = 261/275 (94.91%), Postives = 263/275 (95.64%), Query Frame = 0


Query: 1   MASSVTSASAVANPTCPSLARRCINHKSSHCALSFPLPHNPKLRIFTRGVQPVRKHSTLI 60
           MASSVTSASAVA PTCPSLAR CINHKSSHCALSF LPH PKLRIFTRGVQPVRKHSTLI
Sbjct: 1   MASSVTSASAVAKPTCPSLARCCINHKSSHCALSFRLPHTPKLRIFTRGVQPVRKHSTLI 60

Query: 61  QAQLNESSISLKDTIDGSAKSLSDESSKPLATEESISEFITQVSSLIKLVDSRDIVELQL 120
           QAQLNESSISLKDT+DGSAKSLSDESSKPLATEESISEFITQVSSLIKLVDSRDIVELQL
Sbjct: 61  QAQLNESSISLKDTMDGSAKSLSDESSKPLATEESISEFITQVSSLIKLVDSRDIVELQL 120

Query: 121 KQLDCEVTIRKKEALPQAPPPAAVPMMYAS--PPSPSPSVAPPAPAPVSGPAALPAPASP 180
           KQLDCEVTIRKKEALPQAPPPAAVPMMYA+  PP P PSVAPPAPAPV GPAALPAPASP
Sbjct: 121 KQLDCEVTIRKKEALPQAPPPAAVPMMYAAPLPPPPLPSVAPPAPAPVPGPAALPAPASP 180

Query: 181 VSSLPSSPPAAKSTSSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVQKGQILCIIEAMK 240
           VSS PSSPPAAKSTSSSLPPLKCPMAG FYRSPGPGEPPFVKVGDKVQKGQILCIIEAMK
Sbjct: 181 VSSSPSSPPAAKSTSSSLPPLKCPMAGMFYRSPGPGEPPFVKVGDKVQKGQILCIIEAMK 240

Query: 241 LMNEIEADQSGTIVEVIAEDGKPVSVDTPLFCIQP 274
           LMNEIEADQSGTIVEVIAEDGKPVSVDTPLF IQP
Sbjct: 241 LMNEIEADQSGTIVEVIAEDGKPVSVDTPLFRIQP 275

[Close]

BLAST of CmoCh12G011710 vs. ExPASy TrEMBL
Match: A0A6J1HLI3 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Cucurbita maxima OX=3661 GN=LOC111465633 PE=4 SV=1)

HSP 1 Score: 453.8 bits (1166), Expect = 5.2e-124
Identity = 255/275 (92.73%), Postives = 257/275 (93.45%), Query Frame = 0


Query: 1   MASSVTSASAVANPTCPSLARRCINHKSSHCALSFPLPHNPKLRIFTRGVQPVRKHSTLI 60
           MASSVTSASAVA PTCPSLAR CINHKSSHCALSF LPH PKLRIFTRGVQPVRKHSTLI
Sbjct: 1   MASSVTSASAVAKPTCPSLARCCINHKSSHCALSFRLPHTPKLRIFTRGVQPVRKHSTLI 60

Query: 61  QAQLNESSISLKDTIDGSAKSLSDESSKPLATEESISEFITQVSSLIKLVDSRDIVELQL 120
           QAQLNE      DT+DGSAKSLSDESSKPLATEESISEFITQVSSLIKLVDSRDIVELQL
Sbjct: 61  QAQLNE------DTMDGSAKSLSDESSKPLATEESISEFITQVSSLIKLVDSRDIVELQL 120

Query: 121 KQLDCEVTIRKKEALPQAPPPAAVPMMYAS--PPSPSPSVAPPAPAPVSGPAALPAPASP 180
           KQLDCEVTIRKKEALPQAPPPAAVPMMYA+  PP P PSVAPPAPAPV GPAALPAPASP
Sbjct: 121 KQLDCEVTIRKKEALPQAPPPAAVPMMYAAPLPPPPLPSVAPPAPAPVPGPAALPAPASP 180

Query: 181 VSSLPSSPPAAKSTSSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVQKGQILCIIEAMK 240
           VSS PSSPPAAKSTSSSLPPLKCPMAG FYRSPGPGEPPFVKVGDKVQKGQILCIIEAMK
Sbjct: 181 VSSSPSSPPAAKSTSSSLPPLKCPMAGMFYRSPGPGEPPFVKVGDKVQKGQILCIIEAMK 240

Query: 241 LMNEIEADQSGTIVEVIAEDGKPVSVDTPLFCIQP 274
           LMNEIEADQSGTIVEVIAEDGKPVSVDTPLF IQP
Sbjct: 241 LMNEIEADQSGTIVEVIAEDGKPVSVDTPLFRIQP 269

[Close]

BLAST of CmoCh12G011710 vs. ExPASy TrEMBL
Match: A0A6J1FDN2 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Cucurbita moschata OX=3662 GN=LOC111444423 PE=4 SV=1)

HSP 1 Score: 445.7 bits (1145), Expect = 1.4e-121
Identity = 249/273 (91.21%), Postives = 249/273 (91.21%), Query Frame = 0


Query: 1   MASSVTSASAVANPTCPSLARRCINHKSSHCALSFPLPHNPKLRIFTRGVQPVRKHSTLI 60
           MASSVTSASAVANPTCPSLARRCINHKSSHCALSFPLPHNPKLRIFTR            
Sbjct: 1   MASSVTSASAVANPTCPSLARRCINHKSSHCALSFPLPHNPKLRIFTR------------ 60

Query: 61  QAQLNESSISLKDTIDGSAKSLSDESSKPLATEESISEFITQVSSLIKLVDSRDIVELQL 120
                       DTIDGSAKSLSDESSKPLATEESISEFITQVSSLIKLVDSRDIVELQL
Sbjct: 61  ------------DTIDGSAKSLSDESSKPLATEESISEFITQVSSLIKLVDSRDIVELQL 120

Query: 121 KQLDCEVTIRKKEALPQAPPPAAVPMMYASPPSPSPSVAPPAPAPVSGPAALPAPASPVS 180
           KQLDCEVTIRKKEALPQAPPPAAVPMMYASPPSPSPSVAPPAPAPVSGPAALPAPASPVS
Sbjct: 121 KQLDCEVTIRKKEALPQAPPPAAVPMMYASPPSPSPSVAPPAPAPVSGPAALPAPASPVS 180

Query: 181 SLPSSPPAAKSTSSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVQKGQILCIIEAMKLM 240
           SLPSSPPAAKSTSSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVQKGQILCIIEAMKLM
Sbjct: 181 SLPSSPPAAKSTSSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVQKGQILCIIEAMKLM 240

Query: 241 NEIEADQSGTIVEVIAEDGKPVSVDTPLFCIQP 274
           NEIEADQSGTIVEVIAEDGKPVSVDTPLFCIQP
Sbjct: 241 NEIEADQSGTIVEVIAEDGKPVSVDTPLFCIQP 249

[Close]

BLAST of CmoCh12G011710 vs. TAIR 10
Match: AT5G16390.1 (chloroplastic acetylcoenzyme A carboxylase 1 )

HSP 1 Score: 228.8 bits (582), Expect = 5.3e-60
Identity = 152/283 (53.71%), Postives = 190/283 (67.14%), Query Frame = 0


Query: 4   SVTSASAVANPTCPSLARRCINHKSSHCALSFPLPHNPKLRIFTRGVQPVRKHSTLIQAQ 63
           SVTS +A A+    +        ++    +SF L   PKLR  ++   P R    +++AQ
Sbjct: 7   SVTSPAAAASVYAVTQTSSHFPIQNRSRRVSFRLSAKPKLRFLSK---PSRSSYPVVKAQ 66

Query: 64  LNESSISLKDT---IDGSAKSLSDE---------SSKPLATEESISEFITQVSSLIKLVD 123
            N+ S         +DG + +   E         SS  LATEESISEF+TQV++L+KLVD
Sbjct: 67  SNKVSTGASSNAAKVDGPSSAEGKEKNSLKESSASSPELATEESISEFLTQVTTLVKLVD 126

Query: 124 SRDIVELQLKQLDCEVTIRKKEALPQAPPPAA-VPMMYASPPSPSPSVAPPAPAPVSGPA 183
           SRDIVELQLKQLDCE+ IRKKEALPQ   PA+ V M   + PS +  +APPA AP    A
Sbjct: 127 SRDIVELQLKQLDCELVIRKKEALPQPQAPASYVMMQQPNQPSYAQQMAPPA-APA---A 186

Query: 184 ALPAPASPVSSLPSSPPAAKSTSSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVQKGQI 243
           A PAP++P S  P SPP      SSLP +K PMAGTFYRSP PGEPPF+KVGDKVQKGQ+
Sbjct: 187 AAPAPSTPASLPPPSPPT--PAKSSLPTVKSPMAGTFYRSPAPGEPPFIKVGDKVQKGQV 246

Query: 244 LCIIEAMKLMNEIEADQSGTIVEVIAEDGKPVSVDTPLFCIQP 274
           LCI+EAMKLMNEIE+D +GT+V+++AEDGKPVS+DTPLF +QP
Sbjct: 247 LCIVEAMKLMNEIESDHTGTVVDIVAEDGKPVSLDTPLFVVQP 280

[Close]

BLAST of CmoCh12G011710 vs. TAIR 10
Match: AT5G15530.1 (biotin carboxyl carrier protein 2 )

HSP 1 Score: 198.0 bits (502), Expect = 1.0e-50
Identity = 126/220 (57.27%), Postives = 158/220 (71.82%), Query Frame = 0


Query: 54  RKHSTLIQAQLNESSISLKDTIDGSAKSLSDESSKPLATEESISEFITQVSSLIKLVDSR 113
           R  +T  +   N + ++    ++G AK+   E ++       +SEF+ +VS L+KLVDS+
Sbjct: 51  RLRATTNEVVSNSTPMTNGGYMNGKAKTNVPEPAE-------LSEFMAKVSGLLKLVDSK 110

Query: 114 DIVELQLKQLDCEVTIRKKEALPQAPPPAAVPMMYASPPSPSPSVAPPAPAPVSGPAALP 173
           DIVEL+LKQLDCE+ IRKKEAL QA PPA  P+ ++ PP  +    PPA      P ALP
Sbjct: 111 DIVELELKQLDCEIVIRKKEALQQAVPPA--PVYHSMPPVMADFSMPPAQ-----PVALP 170

Query: 174 APASPVSSLPSSPPAAKSTSSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVQKGQILCI 233
              +P S+ P++     + SSS PPLK PMAGTFYRSPGPGEPPFVKVGDKVQKGQI+CI
Sbjct: 171 PSPTPTST-PATAKPTSAPSSSHPPLKSPMAGTFYRSPGPGEPPFVKVGDKVQKGQIVCI 230

Query: 234 IEAMKLMNEIEADQSGTIVEVIAEDGKPVSVDTPLFCIQP 274
           IEAMKLMNEIEA++SGTI+E++AEDGKPVSVDTPLF I P
Sbjct: 231 IEAMKLMNEIEAEKSGTIMELLAEDGKPVSVDTPLFVIAP 255

[Close]

BLAST of CmoCh12G011710 vs. TAIR 10
Match: AT5G16390.2 (chloroplastic acetylcoenzyme A carboxylase 1 )

HSP 1 Score: 183.7 bits (465), Expect = 1.9e-46
Identity = 133/254 (52.36%), Postives = 163/254 (64.17%), Query Frame = 0


Query: 4   SVTSASAVANPTCPSLARRCINHKSSHCALSFPLPHNPKLRIFTRGVQPVRKHSTLIQAQ 63
           SVTS +A A+    +        ++    +SF L   PKLR  ++   P R    +++AQ
Sbjct: 7   SVTSPAAAASVYAVTQTSSHFPIQNRSRRVSFRLSAKPKLRFLSK---PSRSSYPVVKAQ 66

Query: 64  LNESSISLKDT---IDGSAKSLSDE---------SSKPLATEESISEFITQVSSLIKLVD 123
            N+ S         +DG + +   E         SS  LATEESISEF+TQV++L+KLVD
Sbjct: 67  SNKVSTGASSNAAKVDGPSSAEGKEKNSLKESSASSPELATEESISEFLTQVTTLVKLVD 126

Query: 124 SRDIVELQLKQLDCEVTIRKKEALPQAPPPAA-VPMMYASPPSPSPSVAPPAPAPVSGPA 183
           SRDIVELQLKQLDCE+ IRKKEALPQ   PA+ V M   + PS +  +APPA AP    A
Sbjct: 127 SRDIVELQLKQLDCELVIRKKEALPQPQAPASYVMMQQPNQPSYAQQMAPPA-APA---A 186

Query: 184 ALPAPASPVSSLPSSPPAAKSTSSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVQKGQI 243
           A PAP++P S  P SPP      SSLP +K PMAGTFYRSP PGEPPF+KVGDKVQKGQ+
Sbjct: 187 AAPAPSTPASLPPPSPPT--PAKSSLPTVKSPMAGTFYRSPAPGEPPFIKVGDKVQKGQV 246

Query: 244 LCIIEAMKLMNEIE 245
           LCI+EAMKLMNEIE
Sbjct: 247 LCIVEAMKLMNEIE 251

[Close]

BLAST of CmoCh12G011710 vs. TAIR 10
Match: AT3G15690.2 (Single hybrid motif superfamily protein )

HSP 1 Score: 43.9 bits (102), Expect = 2.4e-04
Identity = 68/251 (27.09%), Postives = 110/251 (43.82%), Query Frame = 0


Query: 34  SFPLPHNPKLRIFTRGVQPVRKHSTLIQAQLNESSISLKDTIDGSAKSLSDESSKPLATE 93
           S  +P+N +  +  R V+ +   +T     +    +S   T + SA ++  + SK + + 
Sbjct: 25  SLLIPYNQRSLLRQRPVKYLSLKTTF--GSVKAVQVSTVPTAETSA-TIEVKDSKEIKSS 84

Query: 94  ESISEFITQVSSLIKLV----DSRDIVELQLKQLDCEVTIRKKEALPQAPPPAAVPMMYA 153
              ++ + + S +  LV    DS  I E +LK     + + +  A   +  P        
Sbjct: 85  RLNAQLVPKPSEVEALVTEICDSSSIAEFELKLGGFRLYVARNIADNSSLQP-------- 144

Query: 154 SPPSPSPSVAPPAPAPVSGPAALPAPASPVS----SLPSSPPAAKSTSSSLPPLKCPMAG 213
                     PP PA  +  A   +P S  S    SL  S PA+ +    L  L+ P  G
Sbjct: 145 ----------PPTPAVTASNATTESPESNGSASSTSLAISKPASSAADQGLMILQSPKVG 204

Query: 214 TFYRS---PGPGEPPFVKVGDKVQKGQILCIIEAMKLMNEIEADQSGTIVEVIAEDGKPV 273
            F RS    G   P   K  D+V++GQILC IE +     IE+D +G +V+++ EDG+PV
Sbjct: 205 FFRRSKTIKGKRLPSSCKEKDQVKEGQILCYIEQLGGQFPIESDVTGEVVKILREDGEPV 254

[Close]

BLAST of CmoCh12G011710 vs. TAIR 10
Match: AT1G52670.1 (Single hybrid motif superfamily protein )

HSP 1 Score: 43.1 bits (100), Expect = 4.1e-04
Identity = 61/241 (25.31%), Postives = 108/241 (44.81%), Query Frame = 0


Query: 37  LPHNPKLRIFTRGVQPVRKHSTLIQAQLNESSISLKDTIDGSAKSLSDESSKPLATEESI 96
           +P+N +L +    ++ +   +TL   +  + S       +  A     + +K       +
Sbjct: 28  IPNNQRLFVDQSPMKYLSLRTTLRSVKAIQLSTVPPAETEAIADVKDSDETKSTVVNTHL 87

Query: 97  SEFITQVSSLI-KLVDSRDIVELQLKQLDCEVTIRKKEALPQAPPPAAVPMMYASPPSPS 156
               ++V +LI ++ DS  I E +LK     + + +K     +PPP  +  + A+  S +
Sbjct: 88  MPKSSEVEALISEITDSSSIAEFELKLGGFRLYVARKLTDESSPPPQQIQPVVAA--SAT 147

Query: 157 PSVAPPAPAPVSGPAALPAPASPVSSLPSSPPAAKSTSSSLPPLKCPMAGTFYRS---PG 216
           P       +  S   A+   +S  +  P +  A K+    L  L+ P  G F RS    G
Sbjct: 148 PEGVHTNGSATSSSLAITKTSSSSADRPQT-LANKAADQGLVILQSPTVGYFRRSKTIKG 207

Query: 217 PGEPPFVKVGDKVQKGQILCIIEAMKLMNEIEADQSGTIVEVIAEDGKPVSVDTPLFCIQ 274
              P   K  D V++GQ+LC IE +     +E+D SG IV+++ EDG+PV  +  L  + 
Sbjct: 208 KRTPTICKEKDIVKEGQVLCYIEQLGGQIPVESDVSGEIVKILREDGEPVGYNDALITVL 265

The following BLAST results are available for this feature:

BLAST of CmoCh12G011710 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q42783	3.9e-60	55.99	Biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplastic OS=Glyc...	[more]
Q42533	7.4e-59	53.71	Biotin carboxyl carrier protein of acetyl-CoA carboxylase 1, chloroplastic OS=Ar...	[more]
Q9LLC1	1.4e-49	57.27	Biotin carboxyl carrier protein of acetyl-CoA carboxylase 2, chloroplastic OS=Ar...	[more]
Q06881	8.0e-21	40.91	Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Nostoc sp. (strain ...	[more]
P37799	1.7e-18	40.12	Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Pseudomonas aerugin...	[more]

BLAST of CmoCh12G011710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FJC4	7.5e-139	100.00	Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Cucurbita moschata ...	[more]
A0A6J1FCR0	3.3e-134	97.80	Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Cucurbita moschata ...	[more]
A0A6J1HMV9	1.2e-128	94.91	Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Cucurbita maxima OX...	[more]
A0A6J1HLI3	5.2e-124	92.73	Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Cucurbita maxima OX...	[more]
A0A6J1FDN2	1.4e-121	91.21	Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Cucurbita moschata ...	[more]

BLAST of CmoCh12G011710 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G16390.1	5.3e-60	53.71	chloroplastic acetylcoenzyme A carboxylase 1	[more]
AT5G15530.1	1.0e-50	57.27	biotin carboxyl carrier protein 2	[more]
AT5G16390.2	1.9e-46	52.36	chloroplastic acetylcoenzyme A carboxylase 1	[more]
AT3G15690.2	2.4e-04	27.09	Single hybrid motif superfamily protein	[more]
AT1G52670.1	4.1e-04	25.31	Single hybrid motif superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001249	Acetyl-CoA biotin carboxyl carrier	PRINTS	PR01071	ACOABIOTINCC	coord: 201..214 score: 69.44 coord: 233..246 score: 81.75 coord: 218..232 score: 62.96
IPR001249	Acetyl-CoA biotin carboxyl carrier	TIGRFAM	TIGR00531	TIGR00531	coord: 100..272 e-value: 3.5E-40 score: 136.0
None	No IPR available	GENE3D	2.40.50.100		coord: 197..271 e-value: 3.4E-32 score: 112.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 183..197
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 146..172
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 146..197
None	No IPR available	PANTHER	PTHR43416:SF21	BIOTIN CARBOXYL CARRIER PROTEIN OF ACETYL-COA CARBOXYLASE, CHLOROPLASTIC	coord: 1..272
None	No IPR available	PANTHER	PTHR43416	DIHYDROLIPOYLLYSINE-RESIDUE SUCCINYLTRANSFERASE COMPONENT OF 2-OXOGLUTARATE DEHYDROGENASE COMPLEX, MITOCHONDRIAL-RELATED	coord: 1..272
None	No IPR available	CDD	cd06850	biotinyl_domain	coord: 199..269 e-value: 2.1598E-25 score: 93.6347
IPR000089	Biotin/lipoyl attachment	PFAM	PF00364	Biotin_lipoyl	coord: 199..271 e-value: 3.4E-24 score: 84.5
IPR000089	Biotin/lipoyl attachment	PROSITE	PS50968	BIOTINYL_LIPOYL	coord: 196..272 score: 24.281263
IPR001882	Biotin-binding site	PROSITE	PS00188	BIOTIN	coord: 228..245
IPR011053	Single hybrid motif	SUPERFAMILY	51230	Single hybrid motif	coord: 198..271

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh12G011710.1	CmoCh12G011710.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006633	fatty acid biosynthetic process
cellular_component	GO:0009317	acetyl-CoA carboxylase complex
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0003989	acetyl-CoA carboxylase activity