CmoCh12G011550 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh12G011550
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	26S proteasome regulatory subunit S10B homolog B-like
Location	Cmo_Chr12: 10457913 .. 10466179 (+)
RNA-Seq Expression	CmoCh12G011550
Synteny	CmoCh12G011550

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGTGAGGATCTGGAAGCGGATGGTGAATTTGGAGGAGGATACGGCGCTTCACGACGCCGTGAGGAATGGCCATGGCGAGATTGCGAAGCTTCTGGTGAAGGAATGTCCGGAACTGGTGGCGTACGCCAACGGAGTCGGAGAATCGCCGCTGTTTGCGGCGGTGGAGGAGGATTATTTGGAGATTGCGCGGGAGATTCTGAAAGTTGAATCGAATTGCTTGTACGGCGGAAGAGATGGCGCCAATGTGCTACACGCCATCATCATTCGCACACTCAAACGTAAGTTTCATGATATAATTAATTTAAATTTTATTTGATTATAGTAAATTAAAATGTCTATTTTACCTCGGGAACTCACTCCGAACGAACAGAGAATTCAGGTTTAGATATGGAATAGGGGAGGGAGTCATAAATCTTTTTTACCTGTTATTTTTGCCCCGAACCAAGAGGAGATTCCGATTTAGACAGAGAATGGGGGAGGGAGTGGATAATATTTTTACCCGTTAGATAAATGGGGCAGAAGATGTAATTATATTCCCTGTTTTCGTCCCCGTCCCCGTCCCCGTCCCGCTTAATATAAATATATTTTCAATACATATATATATATATATATTTTGAAACGGGCAAAAATAAATGAGAAATTGGATGGAGAAGGCTCCCTTGTCCTCGCCCAACTTCTCTAATCCGAATAGAGATAGTATTCCTTATAGACCTATAATTTTCCTCTTAATTAGCTAACTAAGGAGCGGATTTCAGGGTCCCTTATCTTGTTTATTGTTGGTTTCAATTTTGTTTTAGTTATTGGTGTTGGTGGGTTGGATTAGGTCGGATTGAAACATTTTTTTTATATGTGAATACACTTGCATCGTAAGTAGTATATTCATTGGTTCGGTTTATGTAACCGCCCAACGTTTGCTAGGGGAAGGTTTCCACGCCCTTATAAAGGGTGGTTTGTTCTCCTCCTCAATTAATCTGGGACAAATCCACCCCCTTCAGCCCAACGTCCTCGTTGGCACTCTTTCCTTCCTCCAATCGATGTGGGACCGCCCCCAAATCCACCCCCTTTGAGGCCAGCGTCCTTAATGACACACCGCCTCGTGTCTACCATCCTTCGGGGACCAGCGAGAAGGCTGACATATCGTCCGGTGTCTGGCTCTGATACCATTTGTAACGGCCCAGATCCACCGCTAGCAGATATCGTCCTATTTGGACTTTCCCTTTCGGGCTTCCTCTCAAGGCTTTAAAACGCGTGTACTTGGGGAAGGTTTTCACACTCGTGGTTTGTTCTCCTCCTGAGCCAATGTGGGACATCACAGTTTAACCCAATTGAATTTTTTTTTATTTGAATCAAATCCCATAACTCAACAGGTTAATTGAGTTGTTCGTGTTTTTTCGAGTGAATACTTGTGACTTTAGTCTTTATAGCTCAAGCTTAAGGTTTACGTACACTTTGATAGAGCTTATTCGAGTAGTGTTGAACAAGTTCCCTAACATACTAATAGAACCCGACACTTACGAGTGGCTTCCCCTTCACTACGCGGCCAACCTCGACTCGGAGGAACTGGTTGAACTAATTCTAAAGCATAAACCATGCATGGCTTACAAGACAGACAAATATGGCGACTCGCCATTGCACTTAGCAGCCAAAGAAGGCCGCACTGCCGTCCTCAAACGCTTCGCCAAGCTCTGTCCTGATAGCTGCGAGGTAGCAGACTCAAATGACAGAACAGCTCTCCATGTGGCTGTCGCCAACCGCCAGGCCTACGCTGTCCGAAAGAAGATGGAGTTGGGCAGCTTTCGAAACCTGGTGAACCAACAGGTTATAGTCATGATGCTGGCGTCTAATGGGAGGGTTGATAAGAAGATTATGAATAAGGTTGATTTAGTCCCAAGTTTAGTTGGTACAAAAAGGTACGTCTACTTTAGTCCTCTCTACCGATCTCCATATAATCTTACTTGTTGTAATATATAATCTTACTTGTTGTAATTAGAGATGTCCACGGAGACTGGTATAGGTGGAGAAACTGTTGAGGATTGTTGGACGGGAGTCCCACGTTGGCTAACTAAGGGGATATGCATTTGTTTATAAGTAAGCTTGGTATGAGGCCTTTTGGGAAAACCAAAAGCAAAGCCACGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGATCCGTGGTACTTAACGTGGTATCAGAGTCATGCTCTTAACTTAGTTATGTCAATAGAATCCTCAAATGTCGAACAAAGAAGTTGTGAGTCTCGAAGGTGTAGTCAAAAGTGACTCTCAAGTGTTGAACAAAAAATGTATTTTGTTTGAGGGCTCTCAAGAAAGGAGTCGAGCGTCGATTAAGGGGAGACAGTTTGAGGGATACATAGCTTCAAGGGAGGCTCTATAGTGTAATTTGTTCGAGGAGAGGATTGTTGGGAGGGAGTCCCACATTGGTTAACTAAGGGGAGGATCAAGGGCTATATAGACCTCAGGTGAGGCTTTATGGTGCATTTTGTTCGAGGGGAGGATTGTGAGACGGAGTCCCACATTGGCTAATTAAGGGGATGATCATGAGTTTATAGGTAAAGAATACATCTCCATTGGTACGAGGCATTTTGGAGAAACCAAAAGTAAAGCCATGAGAGCTTATACTCAAAGCGAACAGTATCATACAATTGTGGAGATCTATGGTACTTAACATGGTATCAGAGTCATGTCCTTAACTTAGCCATGTAAATAGAATCCTTAAATATCGAACAAAGAGGCTGTGAGCTTCGAAGGTGTAGTCAAAAAGTGACTCTCAAGTGTTGAACAAAGAGTGTACCTTGTTCGAGAGCTCCAGAGAAAGGAGTTGAGTCTTGTTTAAGGGAAGGTTGTTCAAGGGCTACATAAGCCTTGGAGAAGGCTCTATAGAATTCTTTGTTCGAGGGGAAGATTGTTGAGGATTGTTGGGATGGAGTCCTACATTGGCTAATTAAGGGGATGATCATGAGTTTATAATGAATACATCTCTATTGGTATGAGACGTTTTGGAGATCTATGATTACTGACACGGTATCAAAACCATGTCAATAGAATCCTCAAATATCGAACAAAGAAGTTGTGAGCCTCGAAGGTGTAGTCAAAAGTGACTCAAATGTTGAACAAAGGGTGTATTTTGTTCGAGGGCTCTAGAGAAAGGAGTCAAGCCTCGATTAAAGGGAGGCTGTTCAAGGACTACATAGGTCTCAAGGGAGACTCTATGATGTACTTTGTTCGAGGGGAAGATTGTTGAGGATTATTGAAAGAAGTATTCTCACCTTGGTTAAGTAAGGAATACATCTTCATTGGTATGAGGCCTTTCGAGGGAACCAAGAGCAAAGCCACGAGAGCTTATCCTCAAAATAGACAATATCATACCATTGTGGAGATCTGTAGTTCCTAACAGAAACCTCCGTTCTTGTCTTCTGTCTCCGTGTCTACCTCTTATGCCACAGAACAAGAAACTAATGGAGAGCTTGTGAAGAAAGACAGTACCAGACAGCTACAGAAGTCCCAAATATGGAGCGAATTATCCGATGCCAATCTAGTCGTAGCGACAATTATCGCGACGCTATCCTTCAGTGCCACCTTCCAGGTTCTGGGCGGATACAACTCCGAGGGGAAAGCGGTTCTACGAATGGAGAAATATTTCAGATTGTATATGATATCAGATGCTATGTCTTTCGGGTTTGCAGTGGCGTCGATGTTCGTGACGTTTTTTACGGGATTGTTCGGAGAGAATTCTGGGTTCAGTTCTCCGAGTGCTGGGGACGAGTGCAGTGATGGCAGAACATTCAGGGTTTGCAGGGCTGGTTTGTTCTGTGGCTTGTGTTTCCTTTATTTGGCCTGTGGTTTTCTTAGGGGCTCACTCATGAGTTGAAGCTTTATCAATGTTCTTGATTTTTTTGTGCGAGAATTATCTGTTCTTACCATTAAAAGTATGTATTTCGGCTCTCGTTTCTCGTTTCTCGTTTCGGTTCGTGACTTATTAGTTGATATGATTGAGTTCGTGTTTGATTCCAGTCTCGGTAAGACATTTGCCTTGTGTTATTAAGAAATGCCTAAGATATCTGACTTTCGTTGTTATCTCATAGCTTCACAGTAATTTTGTTGAGCTTCCACATAATTTCCTTTCGATTGAGTCGGTATCCGTTACAGTAGTTTGTTACTCCCATTTTTGGCTCTCGTTTATGCTTGTGGCCTATTAGCTGATATGATAAGGTTCTTGTTTAGTTCCAGCCTTGACAAGTATTCTAGAAAGAACGACGTGGTTTCATGTAGCTACCTATAGCTTCTCTTGTTTTGTGTTACTAGGAAATGCCTAAGATATTTGACTTCGGCTGTTATCCCATAGTTTCACAGTAATTCTATATAGCGTCTACGTAATTTCGTACAGATTGAGTTGGTATTTGTTACAGTAGTTCGTTACTCTCATTTTCGGCTCTTGTTTCTGCTCGTGGTTTATTAGTTGATATGATAGAGTTCTTGTTTGGTTTCATTCTCGGCAAGTATTCTAGAAAGAACGACGTGGTTTCGTGTAGCTACCTATAGCTCCTCTTGCCTTTCAAGCTTACCTCGTGTTATTCAGAAACGCTCGAGATATTAGACTTTCGTTATTATTCCATAACTTCATAATAGTTTTGTAGAACTTCCACATAATTTCCTTCAAATTGAGTCGATGCCCGTTTAAAGCAGTTCGTCGTTACCCCATTCAAAGAATCTCTATTCCAAAACCGTAGTGAGAGTTTCATCTCATACAAGTCCCTCTTTATGTGACGTGCATAATAAAATGAGAATAATACATAAAAAGAAAATATAATAACTATTTTTTTTATATTTGCGTGAAACAAATAAACTCAGGGCGAGACCGAAGGGAGAGGGGGGGCTACGAGCCCTCTCCCGTTGCTGTTACCGGATGGATCACTCGAGTTTATGAGGCGAACAAGCGAAGATGCTCGACCAATAGTTTACGAGGTTCCGGAGCCGGAGTTAATTATTCGAATAAATAATTATAAATATTTTTATATTTATTTTGAAATTTAAATTAGCTAGGTAGAAATTTTAAAAAAATAGTAATATAAAAATACTAATACTAATAATAAATAAATAAATAAATAGGGGCAGACAGACATTTTTAAATTTTGGAAACAATAGGGCTTCTTGCTCTTCAAGCTTTACTCAGAAAACTCGATTCCGACTGCAAAAATGGCGGATGGAGAAGAAGCCGCACGGCGTCATTCCGCTCTCAATGACTACCGCAAGAAGCTCCTTCAGCACAAAGAACTCGACGCTAGAGTCCGATCTCGTATGTCCCTCCCTAACTCTACCTTTACAATCTATGCTCCTCTTCTTTACTTTTCTCAATCCTGCTACTAGACGACTCGATGCTTCTTTGCTGATTTGAGTAATTATTTTAGTCTTTGAATCTTCTGCAATGGTGCCGATCCGTAGAATTTGAATTTTGGGCTGTTAATTCATCCCCCCACCCCCAATTTATGAATTTTGGTATTCGAAAGCCCTAGTATTTCCAAAACGCCTTGTATAGAGTTCTGGGGGAAGTGTGAGAAGATACACATGTTCAAGGAGAGAAATTTAGAAATGATCTGTTATGAAAATACAATCACTGTGAAAATTAGAAAACGTTATGCTGGTTTCATGCTTAGCTAGGAAGTTTTGGGGGATCGGTTGTGTTCTTGACGGTTAGTTTATCAATTCCCTTTGCTACATTTCTACAGTGCTTTCCTAAAGCGGTAGCGGAAGCTGAGATTCTTGTTTATTTTATGGAAGGCAGTAAGATTATGTTTAATTTGTGTTTCCAGTGAGGGAGAATTTACGAGGTGCAAAGAAGGAATTTAACAAGACGGAAGATGACTTGAAGTCTCTGCAAAGCGTTGGGCAGATTATTGGAGAAGTTCTCAGGCCACTCGACAATGAACGCTGTAATTCTTCTTTGTTATTACCTGTGCATTTGTTTTGAGATCAAATTCTCTCAACTTGGTTGATATTGTTGGATTATGGCTGCCTTTTTTATTTCAGTGATTGTCAAAGCAAGCAGTGGACCAAGATATGTGGTTGGATGCCGTAGTAAGGTGGATAAGGAAAAATTGACTTCTGGTACTAGAGTGGTACTTGATATGACAACACTCACCATTATGAGGGCTCTTCCACGAGAAGTAAGTTAGATTTTTCAAGGGAAAATAAAAGTTATATAGTATCCTCAAATGTATGATTGCCCTAAATGTTTCGATGTAATTGTATCTGCTAGGTAGATCCAGTTGTGTATAATATGCTGCATGAAGATCCGGGTAATGTTAGCTATTCTGCTGTGGGCGGTTTGTCCGATCAGATTAGAGAATTGAGAGAGTCTATTGAGCTACCTCTCATGAATCCTGAGCTTTTCCTTAGGGTTGGCATCAAACCTCCTAAGGTACTATCTCTCTATCTCTTTGATGGAATTACCAAATTGTAGTTTTTCTTTTACTCACATTATTTGTTCACTTTTCACTTAAAGGGTGTGCTTCTCTATGGTCCTCCTGGTACCGGCAAGACATTGTTGGCCAGAGCAATTGCGAGTAACATAGATGCCAACTTCTTAAAGGTAGAATTTTCTCCATGTGCAGAAAGGACTTTAATATGTCCCTCTTTCCCAGCTAAAATTTAGCATCTAGCTTCTCTCTTCTCTTCGTTGAAGTATAGGTTGTATCAAGTGCCATAATTGATAAGTACATTGGAGAAAGCGCAAGGTTAATACGGGAGATGTTTGGATATGCACGTGATCACCAGGTAAGATTTTATGTGGTATGAACATCTCTATGTATGAATCTATTAAGAGAGCTGTTTCATAGCTCATGCACCATCCTTTTTGTGCTTAGCCCTGCATAATTTTTATGGATGAGATTGATGCCATTGGTGGGCGGAGATTCAGTGAGGGAACAAGTGCAGATCGTGAAATTCAGCGTACATTGATGGAGTTACTTAATCAGCTTGATGGATTTGATCAGCTTGGCAAGGTATGTCCGGATTTTTTGTTTACTGTGTGATGATATGATGTTATATAACTAGCTGAAATGGAAAATATAGGGTCTTAGATCTTGTTGTCGACTGTGCTAAGACTTGATTGTTTGTCTTAGATCTTATTTGGAATTTCTTACAAACATTTTGTTTTCCGAGAGAAATATATTAACTTGAAACTGGTAAAACTGTAGGTCAAAATGATAATGGCCACAAACAGGCCAGATGTTCTTGACCCTGCACTTCTTCGACCAGGGCGATTGGACCGCAAAATAGAGATTCCTCTGCCAAATGAGCAGTCCAGAACGGAGATTCTTAAGATTCATGCAGCTGGAATTGCCAAGCATGGCGAGATTGATTATGAAGCTGTTGTGAAGCTAGCAGAGGTAATCCTGCTAGTTCTTGTTTATTAATTTCTTTCTAGTTGTTTCCACAATCTATGGATGTTTGAAACTCTCGTTTGTCCAGGGCTTTAACGGAGCCGATTTGCGAAATGTGTGCACTGAAGCTGGAATGTCAGCTATCCGTGCCGAACGGGACTATGTCATCCATGAAGATTTCATGAAGGTAATCTTATTTTGTTTTCTCCAGCACTGTATAGCATACTCTTCCTTCGTTGAGATGGGAGAACGCTCTTTCTTCCCGTATTCACTTTTATCATCTTTTGATGTTCAGGCAGTACGAAAATTAAACGAAGCAAAGAAACTCGAGTCCAGTGCGCACTACAGCGCTGATTTTGGGAAGGAGTGAAGTCATGTAATTTACCCTTTAGCAACCGAAAACATTTTCAAGCACAGCACATTCCTTCCCGGCGGGAAAACTGATATTTTCCTGGTATCACTGGCGCTCATCTTTCAACTAATAGGAACGTGCTTGTATCTGATCAAAAGATGGAAGCTAATGAATCTTTCAAAACAGTATGGCTGTTCTTGATCTTTTCTTTTTTCTTCCAAGCTGAGAGATGAATGTCCACTGTGATTGTCATTTACCAAACCATGATGCCTGTGTGGCTCAGTTTACTGCCTACAGTTGATTGGTAAGGTTAGTTTATGAACTGTTTTTATTTGTAATATTGCTGCTCTCAATATACAACCTGGATTTGATGAACTTGATATTGCAGGAAACTTTGTTTTGGGTAGGTGGGTAGGTGAAAATTAATTTGATTGTACTCTTAACTTAACTAGATTTGGATGTGTGTTTTCTTAAAGGAGTATAACTCACTCTTTCTGAAA

mRNA sequence

ATGGCGGTGAGGATCTGGAAGCGGATGGTGAATTTGGAGGAGGATACGGCGCTTCACGACGCCGTGAGGAATGGCCATGGCGAGATTGCGAAGCTTCTGGTGAAGGAATGTCCGGAACTGGTGGCGTACGCCAACGGAGTCGGAGAATCGCCGCTGTTTGCGGCGGTGGAGGAGGATTATTTGGAGATTGCGCGGGAGATTCTGAAAGTTGAATCGAATTGCTTGTACGGCGGAAGAGATGGCGCCAATGTGCTACACGCCATCATCATTCGCACACTCAAACAGCTTATTCGAGTAGTGTTGAACAAGTTCCCTAACATACTAATAGAACCCGACACTTACGAGTGGCTTCCCCTTCACTACGCGGCCAACCTCGACTCGGAGGAACTGGTTGAACTAATTCTAAAGCATAAACCATGCATGGCTTACAAGACAGACAAATATGGCGACTCGCCATTGCACTTAGCAGCCAAAGAAGGCCGCACTGCCGTCCTCAAACGCTTCGCCAAGCTCTGTCCTGATAGCTGCGAGGTAGCAGACTCAAATGACAGAACAGCTCTCCATGTGGCTGTCGCCAACCGCCAGGCCTACGCTGTCCGAAAGAAGATGGAGTTGGGCAGCTTTCGAAACCTGGTGAACCAACAGGTTATAGTCATGATGCTGGCGTCTAATGGGAGGGTTGATAAGAAGATTATGAATAAGGTTGATTTAGTCCCAAGTTTAGTTGGTACAAAAAGTAAGCTTGGTATGAGGCCTTTTGGGAAAACCAAAAGCAAAGCCACGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGATCCGTGGTAAAGAATACATCTCCATTGGTACGAGGCATTTTGGAGAAACCAAAAGTAAAGCCATGAGAGCTTATACTCAAAGCGAACAGTATCATACAATTGTGGAGATCTATGAACAAGAAACTAATGGAGAGCTTGTGAAGAAAGACAGTACCAGACAGCTACAGAAGTCCCAAATATGGAGCGAATTATCCGATGCCAATCTAGTCGTAGCGACAATTATCGCGACGCTATCCTTCAGTGCCACCTTCCAGGTTCTGGGCGGATACAACTCCGAGGGGAAAGCGGTTCTACGAATGGAGAAATATTTCAGATTGTATATGATATCAGATGCTATGTCTTTCGGGTTTGCAGTGGCGTCGATGTTCGTGACGTTTTTTACGGGATTGTTCGGAGAGAATTCTGGGTTCAGTTCTCCGAGTGCTGGGGACGAGTGCAGTGATGGCAGAACATTCAGGGGCTTCTTGCTCTTCAAGCTTTACTCAGAAAACTCGATTCCGACTGCAAAAATGGCGGATGGAGAAGAAGCCGCACGGCGTCATTCCGCTCTCAATGACTACCGCAAGAAGCTCCTTCAGCACAAAGAACTCGACGCTAGAGTCCGATCTCTGAGGGAGAATTTACGAGGTGCAAAGAAGGAATTTAACAAGACGGAAGATGACTTGAAGTCTCTGCAAAGCGTTGGGCAGATTATTGGAGAAGTTCTCAGGCCACTCGACAATGAACGCTTGATTGTCAAAGCAAGCAGTGGACCAAGATATGTGGTTGGATGCCGTAGTAAGGTGGATAAGGAAAAATTGACTTCTGGTACTAGAGTGGTACTTGATATGACAACACTCACCATTATGAGGGCTCTTCCACGAGAAGTAGATCCAGTTGTGTATAATATGCTGCATGAAGATCCGGGTAATGTTAGCTATTCTGCTGTGGGCGGTTTGTCCGATCAGATTAGAGAATTGAGAGAGTCTATTGAGCTACCTCTCATGAATCCTGAGCTTTTCCTTAGGGTTGGCATCAAACCTCCTAAGGGTGTGCTTCTCTATGGTCCTCCTGGTACCGGCAAGACATTGTTGGCCAGAGCAATTGCGAGTAACATAGATGCCAACTTCTTAAAGGTTGTATCAAGTGCCATAATTGATAAGTACATTGGAGAAAGCGCAAGGTTAATACGGGAGATGTTTGGATATGCACGTGATCACCAGCCCTGCATAATTTTTATGGATGAGATTGATGCCATTGGTGGGCGGAGATTCAGTGAGGGAACAAGTGCAGATCGTGAAATTCAGCGTACATTGATGGAGTTACTTAATCAGCTTGATGGATTTGATCAGCTTGGCAAGGTCAAAATGATAATGGCCACAAACAGGCCAGATGTTCTTGACCCTGCACTTCTTCGACCAGGGCGATTGGACCGCAAAATAGAGATTCCTCTGCCAAATGAGCAGTCCAGAACGGAGATTCTTAAGATTCATGCAGCTGGAATTGCCAAGCATGGCGAGATTGATTATGAAGCTGTTGTGAAGCTAGCAGAGGGCTTTAACGGAGCCGATTTGCGAAATGTGTGCACTGAAGCTGGAATGTCAGCTATCCGTGCCGAACGGGACTATGTCATCCATGAAGATTTCATGAAGGCAGTACGAAAATTAAACGAAGCAAAGAAACTCGAGTCCAGTGCGCACTACAGCGCTGATTTTGGGAAGGAGTGAAGTCATGTAATTTACCCTTTAGCAACCGAAAACATTTTCAAGCACAGCACATTCCTTCCCGGCGGGAAAACTGATATTTTCCTGGTATCACTGGCGCTCATCTTTCAACTAATAGGAACGTGCTTGTATCTGATCAAAAGATGGAAGCTAATGAATCTTTCAAAACAGTATGGCTGTTCTTGATCTTTTCTTTTTTCTTCCAAGCTGAGAGATGAATGTCCACTGTGATTGTCATTTACCAAACCATGATGCCTGTGTGGCTCAGTTTACTGCCTACAGTTGATTGGTAAGGTTAGTTTATGAACTGTTTTTATTTGTAATATTGCTGCTCTCAATATACAACCTGGATTTGATGAACTTGATATTGCAGGAAACTTTGTTTTGGGTAGGTGGGTAGGTGAAAATTAATTTGATTGTACTCTTAACTTAACTAGATTTGGATGTGTGTTTTCTTAAAGGAGTATAACTCACTCTTTCTGAAA

Coding sequence (CDS)

ATGGCGGTGAGGATCTGGAAGCGGATGGTGAATTTGGAGGAGGATACGGCGCTTCACGACGCCGTGAGGAATGGCCATGGCGAGATTGCGAAGCTTCTGGTGAAGGAATGTCCGGAACTGGTGGCGTACGCCAACGGAGTCGGAGAATCGCCGCTGTTTGCGGCGGTGGAGGAGGATTATTTGGAGATTGCGCGGGAGATTCTGAAAGTTGAATCGAATTGCTTGTACGGCGGAAGAGATGGCGCCAATGTGCTACACGCCATCATCATTCGCACACTCAAACAGCTTATTCGAGTAGTGTTGAACAAGTTCCCTAACATACTAATAGAACCCGACACTTACGAGTGGCTTCCCCTTCACTACGCGGCCAACCTCGACTCGGAGGAACTGGTTGAACTAATTCTAAAGCATAAACCATGCATGGCTTACAAGACAGACAAATATGGCGACTCGCCATTGCACTTAGCAGCCAAAGAAGGCCGCACTGCCGTCCTCAAACGCTTCGCCAAGCTCTGTCCTGATAGCTGCGAGGTAGCAGACTCAAATGACAGAACAGCTCTCCATGTGGCTGTCGCCAACCGCCAGGCCTACGCTGTCCGAAAGAAGATGGAGTTGGGCAGCTTTCGAAACCTGGTGAACCAACAGGTTATAGTCATGATGCTGGCGTCTAATGGGAGGGTTGATAAGAAGATTATGAATAAGGTTGATTTAGTCCCAAGTTTAGTTGGTACAAAAAGTAAGCTTGGTATGAGGCCTTTTGGGAAAACCAAAAGCAAAGCCACGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGATCCGTGGTAAAGAATACATCTCCATTGGTACGAGGCATTTTGGAGAAACCAAAAGTAAAGCCATGAGAGCTTATACTCAAAGCGAACAGTATCATACAATTGTGGAGATCTATGAACAAGAAACTAATGGAGAGCTTGTGAAGAAAGACAGTACCAGACAGCTACAGAAGTCCCAAATATGGAGCGAATTATCCGATGCCAATCTAGTCGTAGCGACAATTATCGCGACGCTATCCTTCAGTGCCACCTTCCAGGTTCTGGGCGGATACAACTCCGAGGGGAAAGCGGTTCTACGAATGGAGAAATATTTCAGATTGTATATGATATCAGATGCTATGTCTTTCGGGTTTGCAGTGGCGTCGATGTTCGTGACGTTTTTTACGGGATTGTTCGGAGAGAATTCTGGGTTCAGTTCTCCGAGTGCTGGGGACGAGTGCAGTGATGGCAGAACATTCAGGGGCTTCTTGCTCTTCAAGCTTTACTCAGAAAACTCGATTCCGACTGCAAAAATGGCGGATGGAGAAGAAGCCGCACGGCGTCATTCCGCTCTCAATGACTACCGCAAGAAGCTCCTTCAGCACAAAGAACTCGACGCTAGAGTCCGATCTCTGAGGGAGAATTTACGAGGTGCAAAGAAGGAATTTAACAAGACGGAAGATGACTTGAAGTCTCTGCAAAGCGTTGGGCAGATTATTGGAGAAGTTCTCAGGCCACTCGACAATGAACGCTTGATTGTCAAAGCAAGCAGTGGACCAAGATATGTGGTTGGATGCCGTAGTAAGGTGGATAAGGAAAAATTGACTTCTGGTACTAGAGTGGTACTTGATATGACAACACTCACCATTATGAGGGCTCTTCCACGAGAAGTAGATCCAGTTGTGTATAATATGCTGCATGAAGATCCGGGTAATGTTAGCTATTCTGCTGTGGGCGGTTTGTCCGATCAGATTAGAGAATTGAGAGAGTCTATTGAGCTACCTCTCATGAATCCTGAGCTTTTCCTTAGGGTTGGCATCAAACCTCCTAAGGGTGTGCTTCTCTATGGTCCTCCTGGTACCGGCAAGACATTGTTGGCCAGAGCAATTGCGAGTAACATAGATGCCAACTTCTTAAAGGTTGTATCAAGTGCCATAATTGATAAGTACATTGGAGAAAGCGCAAGGTTAATACGGGAGATGTTTGGATATGCACGTGATCACCAGCCCTGCATAATTTTTATGGATGAGATTGATGCCATTGGTGGGCGGAGATTCAGTGAGGGAACAAGTGCAGATCGTGAAATTCAGCGTACATTGATGGAGTTACTTAATCAGCTTGATGGATTTGATCAGCTTGGCAAGGTCAAAATGATAATGGCCACAAACAGGCCAGATGTTCTTGACCCTGCACTTCTTCGACCAGGGCGATTGGACCGCAAAATAGAGATTCCTCTGCCAAATGAGCAGTCCAGAACGGAGATTCTTAAGATTCATGCAGCTGGAATTGCCAAGCATGGCGAGATTGATTATGAAGCTGTTGTGAAGCTAGCAGAGGGCTTTAACGGAGCCGATTTGCGAAATGTGTGCACTGAAGCTGGAATGTCAGCTATCCGTGCCGAACGGGACTATGTCATCCATGAAGATTTCATGAAGGCAGTACGAAAATTAAACGAAGCAAAGAAACTCGAGTCCAGTGCGCACTACAGCGCTGATTTTGGGAAGGAGTGA

Protein sequence

MAVRIWKRMVNLEEDTALHDAVRNGHGEIAKLLVKECPELVAYANGVGESPLFAAVEEDYLEIAREILKVESNCLYGGRDGANVLHAIIIRTLKQLIRVVLNKFPNILIEPDTYEWLPLHYAANLDSEELVELILKHKPCMAYKTDKYGDSPLHLAAKEGRTAVLKRFAKLCPDSCEVADSNDRTALHVAVANRQAYAVRKKMELGSFRNLVNQQVIVMMLASNGRVDKKIMNKVDLVPSLVGTKSKLGMRPFGKTKSKATRAYAQSGQYHTIVEIRGKEYISIGTRHFGETKSKAMRAYTQSEQYHTIVEIYEQETNGELVKKDSTRQLQKSQIWSELSDANLVVATIIATLSFSATFQVLGGYNSEGKAVLRMEKYFRLYMISDAMSFGFAVASMFVTFFTGLFGENSGFSSPSAGDECSDGRTFRGFLLFKLYSENSIPTAKMADGEEAARRHSALNDYRKKLLQHKELDARVRSLRENLRGAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKE

Homology

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BLAST of CmoCh12G011550 vs. ExPASy Swiss-Prot
Match: Q9MAK9 (26S proteasome regulatory subunit S10B homolog B OS=Arabidopsis thaliana OX=3702 GN=RPT4B PE=1 SV=1)

HSP 1 Score: 733.0 bits (1891), Expect = 3.7e-210
Identity = 372/399 (93.23%), Postives = 388/399 (97.24%), Query Frame = 0


Query: 446 MADGEEAARRH-SALNDYRKKLLQHKELDARVRSLRENLRGAKKEFNKTEDDLKSLQSVG 505
           M+DG++AARR  +A+ DYRKKLL HKEL++RVR+ RENLR AKKEFNKTEDDLKSLQSVG
Sbjct: 1   MSDGDDAARRRTAAVTDYRKKLLHHKELESRVRTARENLRAAKKEFNKTEDDLKSLQSVG 60

Query: 506 QIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPRE 565
           QIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPRE
Sbjct: 61  QIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPRE 120

Query: 566 VDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYG 625
           VDPVVYNMLHEDPGN+SYSAVGGL DQIRELRESIELPLMNPELFLRVGIKPPKGVLLYG
Sbjct: 121 VDPVVYNMLHEDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYG 180

Query: 626 PPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDE 685
           PPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF YAR+HQPCIIFMDE
Sbjct: 181 PPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDE 240

Query: 686 IDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGR 745
           IDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGR
Sbjct: 241 IDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGR 300

Query: 746 LDRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSA 805
           LDRKIEIPLPNEQSR EILKIHA+GIAKHGEIDYEA+VKL EGFNGADLRN+CTEAGM A
Sbjct: 301 LDRKIEIPLPNEQSRMEILKIHASGIAKHGEIDYEAIVKLGEGFNGADLRNICTEAGMFA 360

Query: 806 IRAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKE 844
           IRAERDYVIHEDFMKAVRKL+EAKKLESS+HY+ADFGKE
Sbjct: 361 IRAERDYVIHEDFMKAVRKLSEAKKLESSSHYNADFGKE 399

[Close]

BLAST of CmoCh12G011550 vs. ExPASy Swiss-Prot
Match: Q9SEI3 (26S proteasome regulatory subunit 10B homolog A OS=Arabidopsis thaliana OX=3702 GN=RPT4A PE=1 SV=1)

HSP 1 Score: 730.3 bits (1884), Expect = 2.4e-209
Identity = 371/399 (92.98%), Postives = 388/399 (97.24%), Query Frame = 0


Query: 446 MADGEEAARRH-SALNDYRKKLLQHKELDARVRSLRENLRGAKKEFNKTEDDLKSLQSVG 505
           M D +E+ RR  +A+++YRKKLLQHKEL++RVR+ RENLRGAKKEFNKTEDDLKSLQSVG
Sbjct: 1   MTDVDESVRRRTAAVSEYRKKLLQHKELESRVRTARENLRGAKKEFNKTEDDLKSLQSVG 60

Query: 506 QIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPRE 565
           QIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPRE
Sbjct: 61  QIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPRE 120

Query: 566 VDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYG 625
           VDPVVYNMLHEDPGN+SYSAVGGL DQIRELRESIELPLMNPELFLRVGIKPPKGVLLYG
Sbjct: 121 VDPVVYNMLHEDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYG 180

Query: 626 PPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDE 685
           PPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF YAR+HQPCIIFMDE
Sbjct: 181 PPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDE 240

Query: 686 IDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGR 745
           IDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD LGKVKMIMATNRPDVLDPALLRPGR
Sbjct: 241 IDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDNLGKVKMIMATNRPDVLDPALLRPGR 300

Query: 746 LDRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSA 805
           LDRKIEIPLPNEQSR +ILKIHAAGIAKHGEIDYEA+VKLAEGFNGADLRN+CTEAGM A
Sbjct: 301 LDRKIEIPLPNEQSRMDILKIHAAGIAKHGEIDYEAIVKLAEGFNGADLRNICTEAGMFA 360

Query: 806 IRAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKE 844
           IRAERDYVIHEDFMKAVRKL+EAKKLESS+HY+ADFGKE
Sbjct: 361 IRAERDYVIHEDFMKAVRKLSEAKKLESSSHYNADFGKE 399

[Close]

BLAST of CmoCh12G011550 vs. ExPASy Swiss-Prot
Match: P62333 (26S proteasome regulatory subunit 10B OS=Homo sapiens OX=9606 GN=PSMC6 PE=1 SV=1)

HSP 1 Score: 603.6 bits (1555), Expect = 3.4e-171
Identity = 299/382 (78.27%), Postives = 336/382 (87.96%), Query Frame = 0


Query: 455 RHSALNDYRKKLLQHKELDARVRSLRENLRGAKKEFNKTEDDLKSLQSVGQIIGEVLRPL 514
           R  AL DYRKKLL+HKE+D R++ LRE L+   K++ K+E+DLK+LQSVGQI+GEVL+ L
Sbjct: 5   RDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQL 64

Query: 515 DNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLH 574
             E+ IVKA++GPRYVVGCR ++DK KL  GTRV LDMTTLTIMR LPREVDP+VYNM H
Sbjct: 65  TEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSH 124

Query: 575 EDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLA 634
           EDPGNVSYS +GGLS+QIRELRE IELPL NPELF RVGI PPKG LLYGPPGTGKTLLA
Sbjct: 125 EDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLA 184

Query: 635 RAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFS 694
           RA+AS +D NFLKVVSS+I+DKYIGESARLIREMF YARDHQPCIIFMDEIDAIGGRRFS
Sbjct: 185 RAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFS 244

Query: 695 EGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLP 754
           EGTSADREIQRTLMELLNQ+DGFD L +VKMIMATNRPD LDPALLRPGRLDRKI I LP
Sbjct: 245 EGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLP 304

Query: 755 NEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIH 814
           NEQ+R +ILKIHA  I KHGEIDYEA+VKL++GFNGADLRNVCTEAGM AIRA+ D+V+ 
Sbjct: 305 NEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQ 364

Query: 815 EDFMKAVRKLNEAKKLESSAHY 837
           EDFMKAVRK+ ++KKLES   Y
Sbjct: 365 EDFMKAVRKVADSKKLESKLDY 386

[Close]

BLAST of CmoCh12G011550 vs. ExPASy Swiss-Prot
Match: P62335 (26S proteasome regulatory subunit 10B OS=Ictidomys tridecemlineatus OX=43179 GN=PSMC6 PE=2 SV=1)

HSP 1 Score: 603.6 bits (1555), Expect = 3.4e-171
Identity = 299/382 (78.27%), Postives = 336/382 (87.96%), Query Frame = 0


Query: 455 RHSALNDYRKKLLQHKELDARVRSLRENLRGAKKEFNKTEDDLKSLQSVGQIIGEVLRPL 514
           R  AL DYRKKLL+HKE+D R++ LRE L+   K++ K+E+DLK+LQSVGQI+GEVL+ L
Sbjct: 5   RDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQL 64

Query: 515 DNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLH 574
             E+ IVKA++GPRYVVGCR ++DK KL  GTRV LDMTTLTIMR LPREVDP+VYNM H
Sbjct: 65  TEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSH 124

Query: 575 EDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLA 634
           EDPGNVSYS +GGLS+QIRELRE IELPL NPELF RVGI PPKG LLYGPPGTGKTLLA
Sbjct: 125 EDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLA 184

Query: 635 RAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFS 694
           RA+AS +D NFLKVVSS+I+DKYIGESARLIREMF YARDHQPCIIFMDEIDAIGGRRFS
Sbjct: 185 RAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFS 244

Query: 695 EGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLP 754
           EGTSADREIQRTLMELLNQ+DGFD L +VKMIMATNRPD LDPALLRPGRLDRKI I LP
Sbjct: 245 EGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLP 304

Query: 755 NEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIH 814
           NEQ+R +ILKIHA  I KHGEIDYEA+VKL++GFNGADLRNVCTEAGM AIRA+ D+V+ 
Sbjct: 305 NEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQ 364

Query: 815 EDFMKAVRKLNEAKKLESSAHY 837
           EDFMKAVRK+ ++KKLES   Y
Sbjct: 365 EDFMKAVRKVADSKKLESKLDY 386

[Close]

BLAST of CmoCh12G011550 vs. ExPASy Swiss-Prot
Match: P62334 (26S proteasome regulatory subunit 10B OS=Mus musculus OX=10090 GN=Psmc6 PE=1 SV=1)

HSP 1 Score: 603.6 bits (1555), Expect = 3.4e-171
Identity = 299/382 (78.27%), Postives = 336/382 (87.96%), Query Frame = 0


Query: 455 RHSALNDYRKKLLQHKELDARVRSLRENLRGAKKEFNKTEDDLKSLQSVGQIIGEVLRPL 514
           R  AL DYRKKLL+HKE+D R++ LRE L+   K++ K+E+DLK+LQSVGQI+GEVL+ L
Sbjct: 5   RDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQL 64

Query: 515 DNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLH 574
             E+ IVKA++GPRYVVGCR ++DK KL  GTRV LDMTTLTIMR LPREVDP+VYNM H
Sbjct: 65  TEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSH 124

Query: 575 EDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLA 634
           EDPGNVSYS +GGLS+QIRELRE IELPL NPELF RVGI PPKG LLYGPPGTGKTLLA
Sbjct: 125 EDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLA 184

Query: 635 RAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFS 694
           RA+AS +D NFLKVVSS+I+DKYIGESARLIREMF YARDHQPCIIFMDEIDAIGGRRFS
Sbjct: 185 RAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFS 244

Query: 695 EGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLP 754
           EGTSADREIQRTLMELLNQ+DGFD L +VKMIMATNRPD LDPALLRPGRLDRKI I LP
Sbjct: 245 EGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLP 304

Query: 755 NEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIH 814
           NEQ+R +ILKIHA  I KHGEIDYEA+VKL++GFNGADLRNVCTEAGM AIRA+ D+V+ 
Sbjct: 305 NEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQ 364

Query: 815 EDFMKAVRKLNEAKKLESSAHY 837
           EDFMKAVRK+ ++KKLES   Y
Sbjct: 365 EDFMKAVRKVADSKKLESKLDY 386

[Close]

BLAST of CmoCh12G011550 vs. ExPASy TrEMBL
Match: A0A6J1FCH3 (26S proteasome regulatory subunit S10B homolog B-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111444150 PE=3 SV=1)

HSP 1 Score: 776.9 bits (2005), Expect = 8.4e-221
Identity = 398/398 (100.00%), Postives = 398/398 (100.00%), Query Frame = 0


Query: 446 MADGEEAARRHSALNDYRKKLLQHKELDARVRSLRENLRGAKKEFNKTEDDLKSLQSVGQ 505
           MADGEEAARRHSALNDYRKKLLQHKELDARVRSLRENLRGAKKEFNKTEDDLKSLQSVGQ
Sbjct: 1   MADGEEAARRHSALNDYRKKLLQHKELDARVRSLRENLRGAKKEFNKTEDDLKSLQSVGQ 60

Query: 506 IIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREV 565
           IIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREV
Sbjct: 61  IIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREV 120

Query: 566 DPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP 625
           DPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP
Sbjct: 121 DPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP 180

Query: 626 PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI 685
           PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI
Sbjct: 181 PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI 240

Query: 686 DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL 745
           DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL
Sbjct: 241 DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL 300

Query: 746 DRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAI 805
           DRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAI
Sbjct: 301 DRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAI 360

Query: 806 RAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKE 844
           RAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKE
Sbjct: 361 RAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKE 398

[Close]

BLAST of CmoCh12G011550 vs. ExPASy TrEMBL
Match: A0A6J1HL87 (26S proteasome regulatory subunit S10B homolog B-like OS=Cucurbita maxima OX=3661 GN=LOC111465571 PE=3 SV=1)

HSP 1 Score: 776.2 bits (2003), Expect = 1.4e-220
Identity = 397/398 (99.75%), Postives = 398/398 (100.00%), Query Frame = 0


Query: 446 MADGEEAARRHSALNDYRKKLLQHKELDARVRSLRENLRGAKKEFNKTEDDLKSLQSVGQ 505
           MADGEEAARRHSALNDYRKKLLQHKELDARVRSLRENLRGAKKEFNKTEDDLKSLQSVGQ
Sbjct: 1   MADGEEAARRHSALNDYRKKLLQHKELDARVRSLRENLRGAKKEFNKTEDDLKSLQSVGQ 60

Query: 506 IIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREV 565
           IIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREV
Sbjct: 61  IIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREV 120

Query: 566 DPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP 625
           DPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP
Sbjct: 121 DPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP 180

Query: 626 PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI 685
           PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI
Sbjct: 181 PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI 240

Query: 686 DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL 745
           DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL
Sbjct: 241 DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL 300

Query: 746 DRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAI 805
           DRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSA+
Sbjct: 301 DRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAL 360

Query: 806 RAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKE 844
           RAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKE
Sbjct: 361 RAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKE 398

[Close]

BLAST of CmoCh12G011550 vs. ExPASy TrEMBL
Match: A0A6J1HMI9 (26S proteasome regulatory subunit S10B homolog B-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111465550 PE=3 SV=1)

HSP 1 Score: 773.1 bits (1995), Expect = 1.2e-219
Identity = 396/398 (99.50%), Postives = 397/398 (99.75%), Query Frame = 0


Query: 446 MADGEEAARRHSALNDYRKKLLQHKELDARVRSLRENLRGAKKEFNKTEDDLKSLQSVGQ 505
           MADGEEAARRHSALNDYRKKLLQHKELDARVRSLRENLRGAKKEFNKTEDDLKSLQSVGQ
Sbjct: 1   MADGEEAARRHSALNDYRKKLLQHKELDARVRSLRENLRGAKKEFNKTEDDLKSLQSVGQ 60

Query: 506 IIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREV 565
           IIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKE LTSGTRVVLDMTTLTIMRALPREV
Sbjct: 61  IIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEILTSGTRVVLDMTTLTIMRALPREV 120

Query: 566 DPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP 625
           DPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP
Sbjct: 121 DPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP 180

Query: 626 PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI 685
           PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI
Sbjct: 181 PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI 240

Query: 686 DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL 745
           DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL
Sbjct: 241 DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL 300

Query: 746 DRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAI 805
           DRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSA+
Sbjct: 301 DRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAL 360

Query: 806 RAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKE 844
           RAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKE
Sbjct: 361 RAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKE 398

[Close]

BLAST of CmoCh12G011550 vs. ExPASy TrEMBL
Match: A0A0A0LL40 (AAA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G362430 PE=3 SV=1)

HSP 1 Score: 768.5 bits (1983), Expect = 3.0e-218
Identity = 391/398 (98.24%), Postives = 397/398 (99.75%), Query Frame = 0


Query: 446 MADGEEAARRHSALNDYRKKLLQHKELDARVRSLRENLRGAKKEFNKTEDDLKSLQSVGQ 505
           MADGEEAARRH+A+NDYRKKLLQHKELDARVRSLRENLRGAKKEFNKTEDDLKSLQSVGQ
Sbjct: 1   MADGEEAARRHTAVNDYRKKLLQHKELDARVRSLRENLRGAKKEFNKTEDDLKSLQSVGQ 60

Query: 506 IIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREV 565
           IIGEVLRPLDNERLIVKASSGPRYVVGCR+KVDK+KLTSGTRVVLDMTTLTIMRALPREV
Sbjct: 61  IIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDKDKLTSGTRVVLDMTTLTIMRALPREV 120

Query: 566 DPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP 625
           DPVVYNMLHEDPGN+SYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP
Sbjct: 121 DPVVYNMLHEDPGNISYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP 180

Query: 626 PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI 685
           PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI
Sbjct: 181 PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI 240

Query: 686 DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL 745
           DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL
Sbjct: 241 DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL 300

Query: 746 DRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAI 805
           DRKIEIPLPNEQSR EILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAI
Sbjct: 301 DRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAI 360

Query: 806 RAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKE 844
           RAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGK+
Sbjct: 361 RAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKD 398

[Close]

BLAST of CmoCh12G011550 vs. ExPASy TrEMBL
Match: A0A1S3BB45 (26S protease regulatory subunit S10B homolog B-like OS=Cucumis melo OX=3656 GN=LOC103488000 PE=3 SV=1)

HSP 1 Score: 768.5 bits (1983), Expect = 3.0e-218
Identity = 391/398 (98.24%), Postives = 397/398 (99.75%), Query Frame = 0


Query: 446 MADGEEAARRHSALNDYRKKLLQHKELDARVRSLRENLRGAKKEFNKTEDDLKSLQSVGQ 505
           MADGEEAARRH+A+NDYRKKLLQHKELDARVRSLRENLRGAKKEFNKTEDDLKSLQSVGQ
Sbjct: 1   MADGEEAARRHTAVNDYRKKLLQHKELDARVRSLRENLRGAKKEFNKTEDDLKSLQSVGQ 60

Query: 506 IIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREV 565
           IIGEVLRPLDNERLIVKASSGPRYVVGCR+KVDK+KLTSGTRVVLDMTTLTIMRALPREV
Sbjct: 61  IIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDKDKLTSGTRVVLDMTTLTIMRALPREV 120

Query: 566 DPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP 625
           DPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP
Sbjct: 121 DPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP 180

Query: 626 PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI 685
           PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI
Sbjct: 181 PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEI 240

Query: 686 DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL 745
           DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL
Sbjct: 241 DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL 300

Query: 746 DRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAI 805
           DRKIEIPLPNEQSR EILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAI
Sbjct: 301 DRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAI 360

Query: 806 RAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKE 844
           RAERDYV+HEDFMKAVRKLNEAKKLESSAHYSADFGK+
Sbjct: 361 RAERDYVVHEDFMKAVRKLNEAKKLESSAHYSADFGKD 398

[Close]

BLAST of CmoCh12G011550 vs. TAIR 10
Match: AT1G45000.1 (AAA-type ATPase family protein )

HSP 1 Score: 733.0 bits (1891), Expect = 2.7e-211
Identity = 372/399 (93.23%), Postives = 388/399 (97.24%), Query Frame = 0


Query: 446 MADGEEAARRH-SALNDYRKKLLQHKELDARVRSLRENLRGAKKEFNKTEDDLKSLQSVG 505
           M+DG++AARR  +A+ DYRKKLL HKEL++RVR+ RENLR AKKEFNKTEDDLKSLQSVG
Sbjct: 1   MSDGDDAARRRTAAVTDYRKKLLHHKELESRVRTARENLRAAKKEFNKTEDDLKSLQSVG 60

Query: 506 QIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPRE 565
           QIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPRE
Sbjct: 61  QIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPRE 120

Query: 566 VDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYG 625
           VDPVVYNMLHEDPGN+SYSAVGGL DQIRELRESIELPLMNPELFLRVGIKPPKGVLLYG
Sbjct: 121 VDPVVYNMLHEDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYG 180

Query: 626 PPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDE 685
           PPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF YAR+HQPCIIFMDE
Sbjct: 181 PPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDE 240

Query: 686 IDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGR 745
           IDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGR
Sbjct: 241 IDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGR 300

Query: 746 LDRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSA 805
           LDRKIEIPLPNEQSR EILKIHA+GIAKHGEIDYEA+VKL EGFNGADLRN+CTEAGM A
Sbjct: 301 LDRKIEIPLPNEQSRMEILKIHASGIAKHGEIDYEAIVKLGEGFNGADLRNICTEAGMFA 360

Query: 806 IRAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKE 844
           IRAERDYVIHEDFMKAVRKL+EAKKLESS+HY+ADFGKE
Sbjct: 361 IRAERDYVIHEDFMKAVRKLSEAKKLESSSHYNADFGKE 399

[Close]

BLAST of CmoCh12G011550 vs. TAIR 10
Match: AT5G43010.1 (regulatory particle triple-A ATPase 4A )

HSP 1 Score: 730.3 bits (1884), Expect = 1.7e-210
Identity = 371/399 (92.98%), Postives = 388/399 (97.24%), Query Frame = 0


Query: 446 MADGEEAARRH-SALNDYRKKLLQHKELDARVRSLRENLRGAKKEFNKTEDDLKSLQSVG 505
           M D +E+ RR  +A+++YRKKLLQHKEL++RVR+ RENLRGAKKEFNKTEDDLKSLQSVG
Sbjct: 1   MTDVDESVRRRTAAVSEYRKKLLQHKELESRVRTARENLRGAKKEFNKTEDDLKSLQSVG 60

Query: 506 QIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPRE 565
           QIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPRE
Sbjct: 61  QIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPRE 120

Query: 566 VDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYG 625
           VDPVVYNMLHEDPGN+SYSAVGGL DQIRELRESIELPLMNPELFLRVGIKPPKGVLLYG
Sbjct: 121 VDPVVYNMLHEDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYG 180

Query: 626 PPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDE 685
           PPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF YAR+HQPCIIFMDE
Sbjct: 181 PPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDE 240

Query: 686 IDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGR 745
           IDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD LGKVKMIMATNRPDVLDPALLRPGR
Sbjct: 241 IDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDNLGKVKMIMATNRPDVLDPALLRPGR 300

Query: 746 LDRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSA 805
           LDRKIEIPLPNEQSR +ILKIHAAGIAKHGEIDYEA+VKLAEGFNGADLRN+CTEAGM A
Sbjct: 301 LDRKIEIPLPNEQSRMDILKIHAAGIAKHGEIDYEAIVKLAEGFNGADLRNICTEAGMFA 360

Query: 806 IRAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKE 844
           IRAERDYVIHEDFMKAVRKL+EAKKLESS+HY+ADFGKE
Sbjct: 361 IRAERDYVIHEDFMKAVRKLSEAKKLESSSHYNADFGKE 399

[Close]

BLAST of CmoCh12G011550 vs. TAIR 10
Match: AT1G45000.2 (AAA-type ATPase family protein )

HSP 1 Score: 586.3 bits (1510), Expect = 4.0e-167
Identity = 312/399 (78.20%), Postives = 326/399 (81.70%), Query Frame = 0


Query: 446 MADGEEAARRH-SALNDYRKKLLQHKELDARVRSLRENLRGAKKEFNKTEDDLKSLQSVG 505
           M+DG++AARR  +A+ DYRKKLL HKEL++RVR+ RENLR AKKEFNKTEDDLKSLQSVG
Sbjct: 1   MSDGDDAARRRTAAVTDYRKKLLHHKELESRVRTARENLRAAKKEFNKTEDDLKSLQSVG 60

Query: 506 QIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPRE 565
           QIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPRE
Sbjct: 61  QIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPRE 120

Query: 566 VDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYG 625
           VDPVVYNMLHEDPGN+SYSAVGGL DQIRELRESIELPLMNPELFLRVGIKPPKGVLLYG
Sbjct: 121 VDPVVYNMLHEDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYG 180

Query: 626 PPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDE 685
           PPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF YAR+HQPCIIFMDE
Sbjct: 181 PPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDE 240

Query: 686 IDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGR 745
           IDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGK                      
Sbjct: 241 IDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGK---------------------- 300

Query: 746 LDRKIEIPLPNEQSRTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSA 805
                                                     GFNGADLRN+CTEAGM A
Sbjct: 301 ------------------------------------------GFNGADLRNICTEAGMFA 335

Query: 806 IRAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKE 844
           IRAERDYVIHEDFMKAVRKL+EAKKLESS+HY+ADFGKE
Sbjct: 361 IRAERDYVIHEDFMKAVRKLSEAKKLESSSHYNADFGKE 335

[Close]

BLAST of CmoCh12G011550 vs. TAIR 10
Match: AT5G20000.1 (AAA-type ATPase family protein )

HSP 1 Score: 331.6 bits (849), Expect = 1.8e-90
Identity = 175/358 (48.88%), Postives = 237/358 (66.20%), Query Frame = 0


Query: 468 QHKELDARVRSLRENLRGAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGP 527
           Q  EL++RVR LRE              +L+ LQ  G  +GEV++ +   +++VK     
Sbjct: 60  QRNELNSRVRMLRE--------------ELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEG 119

Query: 528 RYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGG 587
           +YVV     +D  KLT  TRV L   +  +   LP +VDP+V  M  E   + +Y  +GG
Sbjct: 120 KYVVDIDKSIDITKLTPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGG 179

Query: 588 LSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLK 647
           L  QI+E++E IELP+ +PELF  +GI  PKGVLLYGPPGTGKTLLARA+A + D  F++
Sbjct: 180 LDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR 239

Query: 648 VVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGT-SADREIQRT 707
           V  S ++ KYIGE +R++RE+F  AR+H P IIFMDEID+IG  R   G+ + D E+QRT
Sbjct: 240 VSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRT 299

Query: 708 LMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRTEILKIH 767
           ++ELLNQLDGF+   K+K++MATNR D+LD ALLRPGR+DRKIE P PNE+SR +ILKIH
Sbjct: 300 MLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDILKIH 359

Query: 768 AAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKL 825
           +  +     ID + + +   G +GA+L+ VCTEAGM A+R  R +V  EDF  AV K+
Sbjct: 360 SRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFEMAVAKV 403

[Close]

BLAST of CmoCh12G011550 vs. TAIR 10
Match: AT5G19990.1 (regulatory particle triple-A ATPase 6A )

HSP 1 Score: 331.3 bits (848), Expect = 2.3e-90
Identity = 175/366 (47.81%), Postives = 240/366 (65.57%), Query Frame = 0


Query: 460 NDYRKKLLQHKELDARVRSLRENLRGAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERL 519
           N+  +   Q  EL++RVR LRE              +L+ LQ  G  +GEV++ +   ++
Sbjct: 52  NNLNRLEAQRNELNSRVRMLRE--------------ELQLLQEPGSYVGEVVKVMGKNKV 111

Query: 520 IVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGN 579
           +VK     +YVV     +D  K+T  TRV L   +  +   LP +VDP+V  M  E   +
Sbjct: 112 LVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPD 171

Query: 580 VSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 639
            +Y  +GGL  QI+E++E IELP+ +PELF  +GI  PKGVLLYGPPGTGKTLLARA+A 
Sbjct: 172 STYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAH 231

Query: 640 NIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGT-S 699
           + D  F++V  S ++ KYIGE +R++RE+F  AR+H P IIFMDEID+IG  R   G+ +
Sbjct: 232 HTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGN 291

Query: 700 ADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQS 759
            D E+QRT++ELLNQLDGF+   K+K++MATNR D+LD ALLRPGR+DRKIE P PNE+S
Sbjct: 292 GDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEES 351

Query: 760 RTEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFM 819
           R +ILKIH+  +     ID + + +   G +GA+L+ VCTEAGM A+R  R +V  EDF 
Sbjct: 352 RFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFE 403

Query: 820 KAVRKL 825
            AV K+
Sbjct: 412 MAVAKV 403

The following BLAST results are available for this feature:

BLAST of CmoCh12G011550 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9MAK9	3.7e-210	93.23	26S proteasome regulatory subunit S10B homolog B OS=Arabidopsis thaliana OX=3702...	[more]
Q9SEI3	2.4e-209	92.98	26S proteasome regulatory subunit 10B homolog A OS=Arabidopsis thaliana OX=3702 ...	[more]
P62333	3.4e-171	78.27	26S proteasome regulatory subunit 10B OS=Homo sapiens OX=9606 GN=PSMC6 PE=1 SV=1	[more]
P62335	3.4e-171	78.27	26S proteasome regulatory subunit 10B OS=Ictidomys tridecemlineatus OX=43179 GN=...	[more]
P62334	3.4e-171	78.27	26S proteasome regulatory subunit 10B OS=Mus musculus OX=10090 GN=Psmc6 PE=1 SV=...	[more]

BLAST of CmoCh12G011550 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FCH3	8.4e-221	100.00	26S proteasome regulatory subunit S10B homolog B-like isoform X2 OS=Cucurbita mo...	[more]
A0A6J1HL87	1.4e-220	99.75	26S proteasome regulatory subunit S10B homolog B-like OS=Cucurbita maxima OX=366...	[more]
A0A6J1HMI9	1.2e-219	99.50	26S proteasome regulatory subunit S10B homolog B-like isoform X2 OS=Cucurbita ma...	[more]
A0A0A0LL40	3.0e-218	98.24	AAA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G362430 PE=3 SV...	[more]
A0A1S3BB45	3.0e-218	98.24	26S protease regulatory subunit S10B homolog B-like OS=Cucumis melo OX=3656 GN=L...	[more]

BLAST of CmoCh12G011550 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G45000.1	2.7e-211	93.23	AAA-type ATPase family protein	[more]
AT5G43010.1	1.7e-210	92.98	regulatory particle triple-A ATPase 4A	[more]
AT1G45000.2	4.0e-167	78.20	AAA-type ATPase family protein	[more]
AT5G20000.1	1.8e-90	48.88	AAA-type ATPase family protein	[more]
AT5G19990.1	2.3e-90	47.81	regulatory particle triple-A ATPase 6A	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 469..503
None	No IPR available	GENE3D	2.40.50.140		coord: 468..572 e-value: 4.0E-31 score: 109.1
None	No IPR available	PFAM	PF13637	Ank_4	coord: 117..166 e-value: 4.9E-8 score: 33.4
None	No IPR available	GENE3D	1.10.8.60		coord: 754..824 e-value: 4.6E-21 score: 76.5
None	No IPR available	PANTHER	PTHR23073:SF104	SUBFAMILY NOT NAMED	coord: 446..830
None	No IPR available	PANTHER	PTHR23073	26S PROTEASOME REGULATORY SUBUNIT	coord: 446..830
None	No IPR available	CDD	cd00009	AAA	coord: 586..753 e-value: 4.94675E-27 score: 105.691
IPR002110	Ankyrin repeat	SMART	SM00248	ANK_2a	coord: 47..76 e-value: 29.0 score: 13.6 coord: 182..211 e-value: 310.0 score: 8.8 coord: 114..143 e-value: 2.2 score: 17.3 coord: 628..658 e-value: 4100.0 score: 0.4 coord: 148..178 e-value: 0.37 score: 19.9 coord: 80..109 e-value: 1100.0 score: 4.8 coord: 13..42 e-value: 0.038 score: 23.1
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 616..755 e-value: 2.6E-21 score: 86.8
IPR020683	Ankyrin repeat-containing domain	PFAM	PF12796	Ank_2	coord: 13..69 e-value: 1.2E-6 score: 29.0
IPR005937	26S proteasome regulatory subunit P45-like	TIGRFAM	TIGR01242	TIGR01242	coord: 467..824 e-value: 5.8E-135 score: 448.1
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 7..332 e-value: 1.0E-32 score: 115.2
IPR036770	Ankyrin repeat-containing domain superfamily	SUPERFAMILY	48403	Ankyrin repeat	coord: 10..204
IPR032501	Proteasomal ATPase OB C-terminal domain	PFAM	PF16450	Prot_ATP_ID_OB	coord: 507..562 e-value: 7.8E-10 score: 38.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 573..753 e-value: 4.9E-66 score: 224.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 580..828
IPR041569	AAA ATPase, AAA+ lid domain	PFAM	PF17862	AAA_lid_3	coord: 776..818 e-value: 6.1E-10 score: 38.8
IPR003959	ATPase, AAA-type, core	PFAM	PF00004	AAA	coord: 620..753 e-value: 1.6E-41 score: 141.8
IPR026961	PGG domain	PFAM	PF13962	PGG	coord: 338..405 e-value: 3.6E-12 score: 46.1
IPR003960	ATPase, AAA-type, conserved site	PROSITE	PS00674	AAA	coord: 723..741

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh12G011550.1	CmoCh12G011550.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1901800	positive regulation of proteasomal protein catabolic process
biological_process	GO:0045899	positive regulation of RNA polymerase II transcription preinitiation complex assembly
biological_process	GO:0030433	ubiquitin-dependent ERAD pathway
biological_process	GO:0030163	protein catabolic process
cellular_component	GO:0031597	cytosolic proteasome complex
cellular_component	GO:0005634	nucleus
cellular_component	GO:0008540	proteasome regulatory particle, base subcomplex
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0008233	peptidase activity
molecular_function	GO:0036402	proteasome-activating activity
molecular_function	GO:0005515	protein binding