CmoCh12G011330 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh12G011330
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionPITH domain-containing protein
LocationCmo_Chr12: 10329724 .. 10335387 (+)
RNA-Seq ExpressionCmoCh12G011330
SyntenyCmoCh12G011330
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
NTTTTTTTTTTTTTTTTTTTTTTCTCCCTTCTCCTCACGTTTGATTAGCCATGGCTGCCGCATCTGCAACCGCCATTCATCGGAATCAGGTGAGTGATGCAGGTTTTTGAGGTGTTTGATTCACAAATTCTTGTTTAAGTTTCGAGAAATGATGAAAGATGATGTTAATACTTGAATCTAGCGAATGAGTTTTGAGTACAGGAGTATCAGGATTTTATTGCTTTAAGCTTAGTTTTCTTTCATACTGATGCTTCGTTTTTAACCAGGTTGATCTGTCCGACTTCATTAACTGGTCTGGTATCGAGTGCCTTAACCAGAATTTCAGCCACACTTTTACAAATGCTCTTAGCCAGGTGCTGTTTGTTATTATATTGACCAGAGATGTTTGTCAGTTGCATGTACTTCGTTGTAGTTTTTTGAATTTCTTTACATGGCTGAATAATTCGTTTCTCGATTCAATGAAGTTAAAGATGGTGCTGAGTTAGACTAGCTTTCTTGCAGAATATAATTTCCTTCTCTCTTTTCTTCTAATTGTAAATCTTTCGAGTTTAATATCTTCTTGAGACTTTATGTGGGAATGGTGTATACTTAATGAGTTCTCAATATGTGTCTAATAAATATTGGAAGTGTATTGATTTTGTACCGCTCGTATTTTTTAACACATTTATTGTGCTAACAAGTGTCCAATATATGTTCAATAAGTGTTAGAGTGTCGAAGTATCCAACACTTGTCGGGCACGGATGGACACTCTTGCCACATTAAAATGTCTGTGCTTCTTAAGGGTATATGGAAGTTGGTGAATATGAACTTAGCTCTCTTAGGCCAAGTGGCTATGCCGCTTTCTTTTAGAGTCTTATTCTTTATGGCGTATGATTATTGTTAGCATGACTGTCACTTCAGGGGTGGGACACATATGTGGTCTCTGAACTAAAGACATATTAAAAGTCCTTGGAAAACCATTTTCTATTGCATACCGAGCTTTATCAACTACATTAAATTCTCTGTGGGGAGCAGGGCTTGCATTCGTTTATGGGAAGAATTTTGGGCTGGTATCAACGTCTTTCAAAATTCTCTTCTCGTCTTTATAATATTACCCTGTGAAAGAGATGTTGGTCAATTCATTGATAATTCGTAATGAACTTCCTTCCACTTGATTTTCATTTTCATTTTCATTTTAGAAGATATCTTTGTGATATTGAGTCGAGATTTATCCAAATATTATCTCCATTTTTAGTAATACGCATAGTTGGGTTCTTCAGCCATCTGGCATCTTTTGTTTTTTTACCCTTCTCCCCACCCCCCTCTTTCACTCTGGATTTTGAAGGCTAAAATCTAAAAAAAGATCAGGTTTTTCACCTGGCTGGTTTCTTTGGGAAGATTAGACACACCATAGACTTTGTCTAGAAGCCTTCATCTTTGTCTGGAAAAAGATCATTTGCTATAGAGATGTCACCTTGTCGTGAAACTTCAGAGTTGAAGCAATTTTCTCACTATTTTGTTGAATCTATGGCTTGCGAGAAATAAAGTATTTTGAGGGTACCGAAGTCTTGGAAGAGGTTTGGAGTTTGGAAAATTTTAATCTCTTGTGGCGTTCTCTTTATCTTTTTATTCTTAACCATTGAACCAACCTACTGTAATTTTGTTTCAAGTTTTTGTTTATAGACTGCTCATCTGTTTGGGTCTATTTTTTAGGCCACTCCTTTTGTGTATTCATTCAGCTTATTAAAAGTTGATGTATCATATGAAGCAAGAGGCTAAAATACCATTTTTGGTCCTTGTAATTTGACACTTGTTCCATTTTAGTTCCTATACTTTCGAATGTAGAATTAATTTAGTCATTACTAATTTGAATGGTAAAATAATAATTTTTATTAGAGGAAAGACATTGTGAGTATCTTTTCAACATTTATAGAGGGAGGGCTAATAGATACAAGTTTTTTTTTTTTTTTTTTTTTTTGAGAAAGTTAATCATGAACAATATAGGGACTAATTTTAAGATTACTAGAAGACGGAGACTACATTTTTACATTTGAAAGTACATAAGACCAAAATAAAACAAGTATCAAAGTCTGGGGTCAAAATGGTATTTTTGACCTAAAAGAAAATTTTCATGATAAAATAGGCATCTCTTTTTCCCTGTAATTTCTTCCCAACAGCCAATGGAAATTATTATACTGAGGGTTTGAAGCAACTTTTCTCTTAAAATAGACTTGTAGGGATAATGATAGCTTGCTTTTGGAGAGTGATGCGGATGAGCAGATTTTGATGTACATACCTTTTAACCAAGTCATTAAATTGCATTCCTTGGTCATCAAGGGACCTGAAGAGGAAGGCAAGTATTCTATTACACCTTTTATTAGTTCTAATTGGTTTATTTTTTTCTGGATATTTCTATTTCAGTATTGCTTTTCATGTATAATTATAGTTCATCTAATCTATTGGCATATTTTTTTTAACATGTCTTACATGTCCAACGTGGCCAATGAGGGTATGATTATTCCATTTTAAAGTCTTACTATTTGATTTTTTTTAAATTTTTTTTTTGGGGTTGTCCACTCCCTTTCCTTTGTCCCTCCAGTGCTCTAGTCTTGTAAATCCCTTGTTACTGCGTCTACAGTTTTTTGCTGTGGTGAGGGAGTAATGGACTATGAATAGAGAAACAGAAAATTTCTCAGGGTTAGAAAGAAAGACAAGCTTGAGTTTGGGTGTGGATAAATGTGCTTTCTTGGCTTTCTCTTTTCTTAATCCCAGCCAATTGAGAAGTTCTTTTTTTTTAGTAGTTCTTGGCTGTGGGAGGATGTCGAATTCTAACCATTCCTGCCCTTTGGTTTCTCTCGTACCTCTATATCTTTCTAGTCAAACAAATACATTGTAATATCTCTTATTAAATTGAAAATTACTGCCATGGAATGTTGCGATCACCTAACCAAGAACGATTGCTCTCTTTTATTCTGCTTAATAACTAATCGCAGGATTCTAACATTGAGGTTGTTCTCCAGGCCCTAGGACTGTTAAGCTTTTCTCAAACAAGGAGAATATGGGATTTGGGTAAACTAATTGTGTTCTTTAGTTGATATTTAGTGCAAGTATTTTCTGAATATTATCAGCTGAGGATTGTCTATTTCATGTTTGTTGCAGCAACGTCAATGACTACCCTCCAAGTGACACGATTGTACTTTCCCCAGATAATCTTACGGTAGATTTTCCATACTTGTATCTGTATCTCATCACAAAAATGGAAAACTCTCTAGGAGAGACTATACACAGGAATTAGGACAGCATTGTTTTATTGCTATGCTTTGTAGGGAAAGCCAGAAGTTGTAAAGTACGTGAAATTTCAAAATGTTCGCAGGTGAGTCATTTTTATTTGTCTTCAATTAGATCGTATATTGAAAGTATCAGTTGATTGTTCTGAATAATTTGAATCTTTATCAGCTTGACAATTTTTATAGAGGACAACCAATCTGGTGCTGATACTACAAAAGTTCAAAAGATTGCCTTGTATGGAACAACGTAAGTTTTTTTTAACAATTAACATTATATTTCATTTGAGTTATTTTTGTCTTCTCTTCTTCCTTTGCTATGTTTTAACTGAATTACTCTATTGCACGATCTATAAGCTTAGAAAAGGCGAGTTTATAATTTAATTACTTTGTCTATAACTGAGCGTTGCATATGAGCACACATCCAAATGGATTAGAGTACACCCCACTTGCAATTGTTCTCAAGGTCTTCAGTCTTCAGTGTAGAATTTGGGTTGATAGGTAATCAATCTTATAATAGCATTTGTGTGCCCTGACGAGGGGGTAAGATTGGATGGTCGTATACAGTTGGATCTTCTATGTTGGGTTTGCGAGAGAGAGAGTTTATGAAGGGTGTGTCATTTGTCTCGGATCTCAAGGTAGCTTGTCCTTATTGACTTACAGAATGGTGTTTTAAAATGTCCAAGCATTTAGGAGCTCTTTCATCATAGATTAGCTCTCCCTTCTTTGCATATCTACCAACTACATGCAGTTGCTAGCATCACTATCTTATTGTTGGATGTTAAGTGCAGCTGTGTGAGATCTCACGTCAGTTAGAGAGGAGAATGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGTAGATGCGTTTTAAAACCATAAGGCTGATGGTGATACGTAATGGATCAAAGCGGACAATATCTATTAGCGGTGGGCTTGGGCTGTAGTTGGAGGCTAACTAACAACCAACAATTAACTCCTTGATCATTTGCTCGCCTCTGTGACATATACCATTCTGGAATCGGTCAGAGCCTTGAGTGACATTATTTACAATGTAGGAAGAGATTTTGATCCACACTAATAAGGCTGTTAAAAGGTGCCTTCTCTGTGATTGCATGAGTGCACTTCCAAATTAAGTGGATTGATTTTAATTGTGCAAAGATATTCTCACCAACAAAGATCTATGATGCAAAGAGCAAGACTAATGCCTTCATGCGGGGGATGAACCACATCTTTCATAATAGAATAGCCGCTGGTAGAATAAATCCCTTAATAGAAAGAATTCTTGGTATTTTTTTTTTCCCTGAGCTTTGGCTCACGAGATCTTTTGAAAAGAAATATCAATTAGGCATCACTTATGTCAGTAGTCTTTATCACTAACTTCAAACTACTTTTGTGAAATGACCATTATAGTATAGACTTGGGAGTGTGCATCTGAAAATGCTCCTCTCTTGGACATTTGATTTGAACAAATGTGGGGTTGAAGATTAAACCTTCATCTTCCAAAAAAGTAATAGGTATTTTATCCACTAACCAATGCTCTGATTAGTTCATCTTTGGAAATTTCATACCAGAGTTTTGCCATTTTCATCATTACTTGATGTTGGCTAACAAAGATTTTAAATCTCATCACTTCTTTTATAGGTTATTTTCTTATCAGCAAAGGTAGTACTTATATAATGGATAATACTCTCGAATTTTGTTTTTCGTATTTTATTCCACAATGAGTGATGCATGTATTATGCTTTAGGGGACAGCATCAAAGTACAAACTACGGTCACGGTCATCCATGAACTATGTCGACCATCTCGTGTATTATAATCCGAACTTATATTGCACAATCCCACCCATGGTGGGATAGGAATAGAGGGAAAACGGCATTCAACTCAATTCCAAATTTTCTTTATTTTTGGCGAAATGTTGAAAGTACTATTGATCTGTGATGCAGGGTTGAAACAACAGACATGAAGGGTCTGAAGAAGATCGAGGACCACTGAATGCAACAAGACAAGAATCAAAGATTGTGAGTAATTGATATCAAAGATCAATTTGCTTTGAAGATAAGAACCAACTTATAATAGATTTCGATGTCATATCCTGGAATTTTGATGAGTTACATCTGTTTATTTGGTGGCGATGCGTAGTTCATTCAATATTTCACATCTTTGCACATTATTTTAGGTAATTTGATGGTGATAAATTCTCCGACTCTTAGCTCTGCTTGGACATGGTTGAGAACACAAGGGCATATTGGTTTTATGTATGGTGCTCAAACATATGAGTTATTTGTTCTCAATAAGGTTGATCCAACCATACTAATGAATGACCCTTTAAGATCATCATCTTATGTGAGAATTTCTCTGAAAAAGGGGGTAAAGCTCAAAAACTGCCAATGG

mRNA sequence

NTTTTTTTTTTTTTTTTTTTTTTCTCCCTTCTCCTCACGTTTGATTAGCCATGGCTGCCGCATCTGCAACCGCCATTCATCGGAATCAGGTTGATCTGTCCGACTTCATTAACTGGTCTGGTATCGAGTGCCTTAACCAGAATTTCAGCCACACTTTTACAAATGCTCTTAGCCAGACTTGTAGGGATAATGATAGCTTGCTTTTGGAGAGTGATGCGGATGAGCAGATTTTGATGTACATACCTTTTAACCAAGTCATTAAATTGCATTCCTTGGTCATCAAGGGACCTGAAGAGGAAGGCCCTAGGACTGTTAAGCTTTTCTCAAACAAGGAGAATATGGGATTTGGCAACGTCAATGACTACCCTCCAAGTGACACGATTGTACTTTCCCCAGATAATCTTACGGGAAAGCCAGAAGTTGTAAAGTACGTGAAATTTCAAAATGTTCGCAGCTTGACAATTTTTATAGAGGACAACCAATCTGGTGCTGATACTACAAAAGTTCAAAAGATTGCCTTGTATGGAACAACGGTTGAAACAACAGACATGAAGGGTCTGAAGAAGATCGAGGACCACTGAATGCAACAAGACAAGAATCAAAGATTGTAATTTGATGGTGATAAATTCTCCGACTCTTAGCTCTGCTTGGACATGGTTGAGAACACAAGGGCATATTGGTTTTATGTATGGTGCTCAAACATATGAGTTATTTGTTCTCAATAAGGTTGATCCAACCATACTAATGAATGACCCTTTAAGATCATCATCTTATGTGAGAATTTCTCTGAAAAAGGGGGTAAAGCTCAAAAACTGCCAATGG

Coding sequence (CDS)

ATGGCTGCCGCATCTGCAACCGCCATTCATCGGAATCAGGTTGATCTGTCCGACTTCATTAACTGGTCTGGTATCGAGTGCCTTAACCAGAATTTCAGCCACACTTTTACAAATGCTCTTAGCCAGACTTGTAGGGATAATGATAGCTTGCTTTTGGAGAGTGATGCGGATGAGCAGATTTTGATGTACATACCTTTTAACCAAGTCATTAAATTGCATTCCTTGGTCATCAAGGGACCTGAAGAGGAAGGCCCTAGGACTGTTAAGCTTTTCTCAAACAAGGAGAATATGGGATTTGGCAACGTCAATGACTACCCTCCAAGTGACACGATTGTACTTTCCCCAGATAATCTTACGGGAAAGCCAGAAGTTGTAAAGTACGTGAAATTTCAAAATGTTCGCAGCTTGACAATTTTTATAGAGGACAACCAATCTGGTGCTGATACTACAAAAGTTCAAAAGATTGCCTTGTATGGAACAACGGTTGAAACAACAGACATGAAGGGTCTGAAGAAGATCGAGGACCACTGA

Protein sequence

MAAASATAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQILMYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPDNLTGKPEVVKYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYGTTVETTDMKGLKKIEDH
Homology
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BLAST of CmoCh12G011330 vs. ExPASy Swiss-Prot
Match: Q9SQZ9 (PITH domain-containing protein At3g04780 OS=Arabidopsis thaliana OX=3702 GN=At3g04780 PE=1 SV=2)

HSP 1 Score: 265.4 bits (677), Expect = 4.6e-70
Identity = 130/176 (73.86%), Postives = 151/176 (85.80%), Query Frame = 0 

Query: 1   MAAASATAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQI 60
           M+A SA+ I + QVDL DFI+WSG+ECLNQ+ SH+  NAL Q  R+++ L LESDADEQ+
Sbjct: 1   MSAESASQIPKGQVDLLDFIDWSGVECLNQSSSHSLPNALKQGYREDEGLNLESDADEQL 60

Query: 61  LMYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPDNLTG 120
           L+YIPFNQVIKLHS  IKGPEEEGP+TVK FSNKE+M F NVND+PPSDT  L+ +NL G
Sbjct: 61  LIYIPFNQVIKLHSFAIKGPEEEGPKTVKFFSNKEHMCFSNVNDFPPSDTAELTEENLKG 120

Query: 121 KPEVVKYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYGTTVETTDMKGLKKIEDH 177
           KP V+KYVKFQNVRSLTIFIE NQSG++ TKVQKIALYG+TVETTDMKGLKKIEDH
Sbjct: 121 KPVVLKYVKFQNVRSLTIFIEANQSGSEVTKVQKIALYGSTVETTDMKGLKKIEDH 176

[Close]
BLAST of CmoCh12G011330 vs. ExPASy Swiss-Prot
Match: O43396 (Thioredoxin-like protein 1 OS=Homo sapiens OX=9606 GN=TXNL1 PE=1 SV=3)

HSP 1 Score: 121.7 bits (304), Expect = 8.3e-27
Identity = 66/170 (38.82%), Postives = 101/170 (59.41%), Query Frame = 0 

Query: 7   TAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQILMYIPF 66
           T I +  +DL  FIN +G ECLN++  H F N     C   D+  LESD DEQ+L+ + F
Sbjct: 117 TDIPKGYMDLMPFINKAGCECLNESDEHGFDN-----CLRKDTTFLESDCDEQLLITVAF 176

Query: 67  NQVIKLHSLVIKGPEE-EGPRTVKLFSN-KENMGFGNVNDYPPSDTIVLSPDNLTGKPEV 126
           NQ +KL+S+  +GP+  +GP+ VK+F N   +M F       P+  + L+ D++     V
Sbjct: 177 NQPVKLYSMKFQGPDNGQGPKYVKIFINLPRSMDFEEAERSEPTQALELTEDDIKEDGIV 236

Query: 127 -VKYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYGTTVETTDMKGLKKI 174
            ++YVKFQNV S+TIF++ NQ   +TT++      GT V+ T+M   K++
Sbjct: 237 PLRYVKFQNVNSVTIFVQSNQGEEETTRISYFTFIGTPVQATNMNDFKRV 281

[Close]
BLAST of CmoCh12G011330 vs. ExPASy Swiss-Prot
Match: Q920J4 (Thioredoxin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Txnl1 PE=1 SV=3)

HSP 1 Score: 119.4 bits (298), Expect = 4.1e-26
Identity = 65/170 (38.24%), Postives = 100/170 (58.82%), Query Frame = 0 

Query: 7   TAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQILMYIPF 66
           T I +  +DL  FIN +G ECLN++  H F N     C   D   LESD DEQ+L+ + F
Sbjct: 117 TDIPKGYMDLMPFINKAGCECLNESDEHGFDN-----CLRKDLSFLESDCDEQLLITVAF 176

Query: 67  NQVIKLHSLVIKGPEE-EGPRTVKLFSN-KENMGFGNVNDYPPSDTIVLSPDNLTGKPEV 126
           NQ +KL+S+  +GP+  +GP+ VK+F N   +M F       P+  + L+ D++     V
Sbjct: 177 NQPVKLYSMKFQGPDNGQGPKYVKIFINLPRSMDFEEAERSEPTQALELTEDDIKEDGIV 236

Query: 127 -VKYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYGTTVETTDMKGLKKI 174
            ++YVKFQNV S+T+F++ NQ   +TT++      GT V+ T+M   K++
Sbjct: 237 PLRYVKFQNVNSVTLFVQSNQGEEETTRISYFTFIGTPVQATNMNDFKRV 281

[Close]
BLAST of CmoCh12G011330 vs. ExPASy Swiss-Prot
Match: Q8CDN6 (Thioredoxin-like protein 1 OS=Mus musculus OX=10090 GN=Txnl1 PE=1 SV=3)

HSP 1 Score: 118.6 bits (296), Expect = 7.0e-26
Identity = 64/168 (38.10%), Postives = 99/168 (58.93%), Query Frame = 0 

Query: 9   IHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQILMYIPFNQ 68
           I +  +DL  FIN +G ECLN++  H F N     C   D   LESD DEQ+L+ + FNQ
Sbjct: 119 IPKGYMDLMPFINKAGCECLNESDEHGFDN-----CLRKDMSFLESDCDEQLLITVAFNQ 178

Query: 69  VIKLHSLVIKGPEE-EGPRTVKLFSN-KENMGFGNVNDYPPSDTIVLSPDNLTGKPEV-V 128
            +KL+S+  +GP+  +GP+ VK+F N   +M F       P+  + L+ D++     V +
Sbjct: 179 PVKLYSMKFQGPDNGQGPKYVKIFINLPRSMDFEEAERSEPTQALELTEDDIKEDGIVPL 238

Query: 129 KYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYGTTVETTDMKGLKKI 174
           +YVKFQNV S+T+F++ NQ   +TT++      GT V+ T+M   K++
Sbjct: 239 RYVKFQNVNSVTLFVQSNQGEEETTRISYFTFIGTPVQATNMNDFKRV 281

[Close]
BLAST of CmoCh12G011330 vs. ExPASy Swiss-Prot
Match: Q9USR1 (Thioredoxin-like protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=txl1 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.8e-21
Identity = 62/178 (34.83%), Postives = 97/178 (54.49%), Query Frame = 0 

Query: 3   AASATAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQILM 62
           A+S++A  +    L   I    +ECLNQ   H   +A +     N S  LESD DEQ+++
Sbjct: 116 ASSSSAPVKGFASLQGCIENPQLECLNQQDDHDLKSAFN----SNPSSFLESDVDEQLMI 175

Query: 63  YIPFNQVIKLHSLVI---KGPEEEGPRTVKLFSNK-ENMGFGNVNDYPPSDTIVLSPDNL 122
           YIPF +V+K+HS+ I   KG     P+T+KL+ N+  N+ F +   + P+  I       
Sbjct: 176 YIPFLEVVKVHSIAITPVKGETSSAPKTIKLYINQPNNLSFEDAESFTPTQVIEDIVYEQ 235

Query: 123 TGKPEVV--KYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYGTTVETTDMKGLKKIE 175
             +P ++  ++VKFQ V SL IFI  N    +TTK+ ++ L+G  V  +    L+K+E
Sbjct: 236 DDQPTIIPLRFVKFQRVNSLVIFIYSNVGEEETTKISRLELFGEPVGDSSKGKLQKVE 289

[Close]
BLAST of CmoCh12G011330 vs. ExPASy TrEMBL
Match: A0A6J1FBX4 (PITH domain-containing protein At3g04780-like OS=Cucurbita moschata OX=3662 GN=LOC111444016 PE=4 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 1.3e-94
Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0 

Query: 1   MAAASATAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQI 60
           MAAASATAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQI
Sbjct: 1   MAAASATAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQI 60

Query: 61  LMYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPDNLTG 120
           LMYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPDNLTG
Sbjct: 61  LMYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPDNLTG 120

Query: 121 KPEVVKYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYGTTVETTDMKGLKKIEDH 177
           KPEVVKYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYGTTVETTDMKGLKKIEDH
Sbjct: 121 KPEVVKYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYGTTVETTDMKGLKKIEDH 176

[Close]
BLAST of CmoCh12G011330 vs. ExPASy TrEMBL
Match: A0A6J1HLS0 (PITH domain-containing protein At3g04780-like OS=Cucurbita maxima OX=3661 GN=LOC111465697 PE=4 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 1.4e-93
Identity = 175/176 (99.43%), Postives = 175/176 (99.43%), Query Frame = 0 

Query: 1   MAAASATAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQI 60
           MAAASATAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQI
Sbjct: 1   MAAASATAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQI 60

Query: 61  LMYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPDNLTG 120
           LMYIPFNQVIKLHSLVIKG EEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPDNLTG
Sbjct: 61  LMYIPFNQVIKLHSLVIKGHEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPDNLTG 120

Query: 121 KPEVVKYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYGTTVETTDMKGLKKIEDH 177
           KPEVVKYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYGTTVETTDMKGLKKIEDH
Sbjct: 121 KPEVVKYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYGTTVETTDMKGLKKIEDH 176

[Close]
BLAST of CmoCh12G011330 vs. ExPASy TrEMBL
Match: A0A6J1KJE4 (PITH domain-containing protein At3g04780-like OS=Cucurbita maxima OX=3661 GN=LOC111493734 PE=4 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 6.9e-93
Identity = 171/176 (97.16%), Postives = 175/176 (99.43%), Query Frame = 0 

Query: 1   MAAASATAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQI 60
           MAAASATAIHRNQVDLSDFINWSG+ECLNQNFSHTFTNAL+QTCRDNDSLLLESDADEQ+
Sbjct: 1   MAAASATAIHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQL 60

Query: 61  LMYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPDNLTG 120
           L+YIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPDNLTG
Sbjct: 61  LIYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPDNLTG 120

Query: 121 KPEVVKYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYGTTVETTDMKGLKKIEDH 177
           KPEVVKYVKFQNVRSLTIFIEDNQSGAD TKVQKIALYGTTVETTDMKGLKKIEDH
Sbjct: 121 KPEVVKYVKFQNVRSLTIFIEDNQSGADVTKVQKIALYGTTVETTDMKGLKKIEDH 176

[Close]
BLAST of CmoCh12G011330 vs. ExPASy TrEMBL
Match: A0A6J1G4V6 (PITH domain-containing protein At3g04780-like OS=Cucurbita moschata OX=3662 GN=LOC111450832 PE=4 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 6.9e-93
Identity = 171/176 (97.16%), Postives = 175/176 (99.43%), Query Frame = 0 

Query: 1   MAAASATAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQI 60
           MAAASATAIHRNQVDLSDFINWSG+ECLNQNFSHTFTNAL+QTCRDNDSLLLESDADEQ+
Sbjct: 1   MAAASATAIHRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQL 60

Query: 61  LMYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPDNLTG 120
           L+YIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPDNLTG
Sbjct: 61  LIYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPDNLTG 120

Query: 121 KPEVVKYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYGTTVETTDMKGLKKIEDH 177
           KPEVVKYVKFQNVRSLTIFIEDNQSGAD TKVQKIALYGTTVETTDMKGLKKIEDH
Sbjct: 121 KPEVVKYVKFQNVRSLTIFIEDNQSGADVTKVQKIALYGTTVETTDMKGLKKIEDH 176

[Close]
BLAST of CmoCh12G011330 vs. ExPASy TrEMBL
Match: A0A5D3D4D2 (PITH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001340 PE=4 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 5.8e-92
Identity = 168/176 (95.45%), Postives = 175/176 (99.43%), Query Frame = 0 

Query: 1   MAAASATAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQI 60
           MAAASATAI+RNQVDLSDFINWSG+ECLNQNFSHTFTNAL+QTCRDNDSLLLESDADEQ+
Sbjct: 1   MAAASATAINRNQVDLSDFINWSGVECLNQNFSHTFTNALNQTCRDNDSLLLESDADEQL 60

Query: 61  LMYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPDNLTG 120
           L+YIPFNQV+KLHSLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPDNLTG
Sbjct: 61  LIYIPFNQVVKLHSLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPDNLTG 120

Query: 121 KPEVVKYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYGTTVETTDMKGLKKIEDH 177
           KPEVVKYVKFQNVRSLTIFIEDNQSG DTTK+QKIALYGTTVETTDMKGLKKIEDH
Sbjct: 121 KPEVVKYVKFQNVRSLTIFIEDNQSGTDTTKIQKIALYGTTVETTDMKGLKKIEDH 176

[Close]
BLAST of CmoCh12G011330 vs. TAIR 10
Match: AT3G04780.1 (Protein of unknown function (DUF1000) )

HSP 1 Score: 265.4 bits (677), Expect = 3.3e-71
Identity = 130/176 (73.86%), Postives = 151/176 (85.80%), Query Frame = 0 

Query: 1   MAAASATAIHRNQVDLSDFINWSGIECLNQNFSHTFTNALSQTCRDNDSLLLESDADEQI 60
           M+A SA+ I + QVDL DFI+WSG+ECLNQ+ SH+  NAL Q  R+++ L LESDADEQ+
Sbjct: 1   MSAESASQIPKGQVDLLDFIDWSGVECLNQSSSHSLPNALKQGYREDEGLNLESDADEQL 60

Query: 61  LMYIPFNQVIKLHSLVIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPDNLTG 120
           L+YIPFNQVIKLHS  IKGPEEEGP+TVK FSNKE+M F NVND+PPSDT  L+ +NL G
Sbjct: 61  LIYIPFNQVIKLHSFAIKGPEEEGPKTVKFFSNKEHMCFSNVNDFPPSDTAELTEENLKG 120

Query: 121 KPEVVKYVKFQNVRSLTIFIEDNQSGADTTKVQKIALYGTTVETTDMKGLKKIEDH 177
           KP V+KYVKFQNVRSLTIFIE NQSG++ TKVQKIALYG+TVETTDMKGLKKIEDH
Sbjct: 121 KPVVLKYVKFQNVRSLTIFIEANQSGSEVTKVQKIALYGSTVETTDMKGLKKIEDH 176

[Close]
BLAST of CmoCh12G011330 vs. TAIR 10
Match: AT2G25950.1 (Protein of unknown function (DUF1000) )

HSP 1 Score: 60.1 bits (144), Expect = 2.1e-09
Identity = 42/154 (27.27%), Postives = 79/154 (51.30%), Query Frame = 0 

Query: 20  INWSGIECLNQNFS---HTFTNALSQTCRDNDSLLLESDADEQILMYIPFNQVIKLHSL- 79
           I+ S +  LN++ S    +   A  Q    +   L  ++ D ++L+++PF   +K+ S+ 
Sbjct: 24  IDLSKVSALNESVSGSAKSVFKAWEQRLHSSGEHLESNEGDPELLVFVPFTSDVKIKSIS 83

Query: 80  VIKGPEEEGPRTVKLFSNKENMGFGNVNDYPPSDTIVLSPDNLTGKPEV-VKYVKFQNVR 139
           ++ GPE   P  +++F N+E + F +           L+ +NL G  E   +Y KFQ+V 
Sbjct: 84  IVGGPEGTSPSKLRVFINREGIDFSDAESMQAVQEWELA-ENLQGVLEYQTRYSKFQSVG 143

Query: 140 SLTIFIEDNQSGADTTKVQKIALYGTTVETTDMK 169
           ++T+   ++  G DTT+++ I   G   E T +K
Sbjct: 144 NITLHFPES-FGGDTTQIRYIGFKG---EATQLK 172

The following BLAST results are available for this feature:
BLAST of CmoCh12G011330 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SQZ94.6e-7073.86PITH domain-containing protein At3g04780 OS=Arabidopsis thaliana OX=3702 GN=At3g... [more]
O433968.3e-2738.82Thioredoxin-like protein 1 OS=Homo sapiens OX=9606 GN=TXNL1 PE=1 SV=3[more]
Q920J44.1e-2638.24Thioredoxin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Txnl1 PE=1 SV=3[more]
Q8CDN67.0e-2638.10Thioredoxin-like protein 1 OS=Mus musculus OX=10090 GN=Txnl1 PE=1 SV=3[more]
Q9USR11.8e-2134.83Thioredoxin-like protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843... [more]
BLAST of CmoCh12G011330 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1FBX41.3e-94100.00PITH domain-containing protein At3g04780-like OS=Cucurbita moschata OX=3662 GN=L... [more]
A0A6J1HLS01.4e-9399.43PITH domain-containing protein At3g04780-like OS=Cucurbita maxima OX=3661 GN=LOC... [more]
A0A6J1KJE46.9e-9397.16PITH domain-containing protein At3g04780-like OS=Cucurbita maxima OX=3661 GN=LOC... [more]
A0A6J1G4V66.9e-9397.16PITH domain-containing protein At3g04780-like OS=Cucurbita moschata OX=3662 GN=L... [more]
A0A5D3D4D25.8e-9295.45PITH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
BLAST of CmoCh12G011330 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G04780.13.3e-7173.86Protein of unknown function (DUF1000) [more]
AT2G25950.12.1e-0927.27Protein of unknown function (DUF1000) [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010400PITH domainPFAMPF06201PITHcoord: 16..160
e-value: 1.2E-37
score: 129.4
IPR010400PITH domainPROSITEPS51532PITHcoord: 5..176
score: 52.00993
IPR037047PITH domain superfamilyGENE3D2.60.120.470PITH domaincoord: 5..176
e-value: 4.6E-53
score: 181.3
IPR045099PITH domain-containing protein 1-likePANTHERPTHR12175AD039 HT014 THIOREDOXIN FAMILY TRP26coord: 3..176
NoneNo IPR availablePANTHERPTHR12175:SF5THIOREDOXIN LIKE 1coord: 3..176
IPR008979Galactose-binding-like domain superfamilySUPERFAMILY49785Galactose-binding domain-likecoord: 7..160

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh12G011330.1CmoCh12G011330.1mRNA