CmoCh12G010940 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCTTCTTCTTCTTCTTCTTCCTACTCTCTCTTTGGCGTTGTCGCCATTGCCTTCCTCGTCTCCGTCTCCTCCCCTGTTCTCTCCTCCAAAGGTATAGTTTTCTCTCCCTCTCTCGTGCTTTTCTGGGTTCGTGTTTCTTTCGATTTTTCATTTGGGAATTTCTTGTTGAAGGGTCACTAGTAGATACATGTGTTGAAGGGTCACTCGTAGATACATGTATGAATAGATACATGTGTTGAAGGGTCACTAGTAGATACATGTATGAATAGATACATGTGTTGAAGGGTCACTAATAGATACATGTGTTGAAGGGTCATTGGTAGATACATGTATGAATAGATACATGTGTTGAAGGGTCACTCGTAGATATATGTATGAATAGATATATGTGTTGAAGAGTCACTCGTAGATACATGTGTTGAATGGTCACTAGTAGATACATGTGTTGAAGGGTCACTAGTAGATATGAATAGATATAAGTAGGTTCCATTAGTTCCTAATTAAATAGATGCATGACTTTTTGGATAATGAATGGTAACAGGGAATGTCCCAAATTACCTATATGTATGTTGGTATTGGTGGAAGAAGTAGAAAATCAATCCAGCATTCCTTCATAATTTTATAAAGTTCTCTTCTTTTCAAGAATTCTACCAAATTTCTCTGTTGTCACTGACATTTCTATATATATATATCAGAATTTCTAACCGAGCTGGGATCGAAAAAACCAAGAAAAATGCATTTTTCTTTAGGAATTTATATGGAAATGACAGTCTGAGCATTGGAGCAATAAAAAACCTTCCAATTTTGGGAACATAACAATGAATTTGTTCCTTCATTGCTATCAATCTGTACAAAACTTGTAAGAATATCTTAGAGAATTGTTTTTTAATCCAATCTGATACAAAATACTTCTCTATTTGATAGGGATGGTTAGATGAACACGATTCTCTACAATGCTATGATATTGTCCACTTTGAGTATAAGTTCTTATAGCTTTGCTTTGGGCTTCCAAAAGACCTCGTACCAATGGAGATAGTATTCCTTGATATTATAAACTCATGATCATTCCTTAAATTAGCTGAGGTGGGACTTTTATCATCCAACACCTCCCCTTAAACAAAGTACGCCTCCCATTAATCGAGGCTCAACTTCTTTTTCTTTTGGAGTCCTTTGTTCGACATTTGAGGATTTACCAATCTATTGGCACGACTAAGTTTAGGGCATAGCTTTGATACCATGTTAGATGAACACGACTCTCCACAATGGTATGATATTGTCCACTTTGAGCCTAAGCTTTCATGACTTTACTTTGGTTTTCCCTCCAAAAGGCCTCATACCAATAGAGGTAGTATTCCTTGATTATAAATCCATTATCATTCCCTAAATTAGCCGAAGTGGGACTTTTATCATCCAATAAGTACTTCAAATGACATTAAATGTTTTGATTAAGAAAATTAAAAACAAACAAACAAGCTCGTGAAACATGGAGGACAACAGTCTGCATATGAATGCTCTGAAAAAAATTTGCCAATTACCTGACTGCAGTTGAAGAAGATAAAGAAAACCTTCTGCAAGGCCTAAACGGCTACCGACAAGCACAGAAGCTCCCGCCGTTTGAAAAGAACGCAAAAGCCTACTGCATCGCAGAAAAAATCGCCGAGGTAGACAAGGACCATCCCTGCAACATTACCACCGCTAATTCAACCGTCACCGCACGCCACCTCTCGCAGATTGAGAATTTCGAGCATTACGCCGAGAAATGCAAGGTCGACCTCAACACCACCGCCGACGCCATCGTGATGCCGGTGTGTGTACCGGATATGGTTGAGCCTATGCTGCTTGCCAACTACACGCAAACGCAGTACGCCCAGTATTTGAACAATTCCAAGTTCGTCGGCGCCGGCCTCGGCGTGGACGTTGACTGGATGGTGGTGATTCTCACCACCGCAGAGCACGGTGGGAGCTTTGCCGGCTCCGGCGCCGGGTCGGTGGTGGCTTCAATGGGAGCGCCGGTGCTGGTGGTTCTGTTAGGGCTTTTCCTTGTGGGAAATCTGTGAGATTGTGAGAGTGTTCTCAGATTTGGCGCCAATGTTCGTTTCTTGGTTTGCAGTTTGTTTAGTATGTAAACGACGTCGTTTCATTTCAATTGAAAGTGTAATTTGAATTTTCTTTTATTAAAAAATATATATATATAT ATGCCTTCTTCTTCTTCTTCTTCCTACTCTCTCTTTGGCGTTGTCGCCATTGCCTTCCTCGTCTCCGTCTCCTCCCCTGTTCTCTCCTCCAAAGTTGAAGAAGATAAAGAAAACCTTCTGCAAGGCCTAAACGGCTACCGACAAGCACAGAAGCTCCCGCCGTTTGAAAAGAACGCAAAAGCCTACTGCATCGCAGAAAAAATCGCCGAGGTAGACAAGGACCATCCCTGCAACATTACCACCGCTAATTCAACCGTCACCGCACGCCACCTCTCGCAGATTGAGAATTTCGAGCATTACGCCGAGAAATGCAAGGTCGACCTCAACACCACCGCCGACGCCATCGTGATGCCGGTGTGTGTACCGGATATGGTTGAGCCTATGCTGCTTGCCAACTACACGCAAACGCAGTACGCCCAGTATTTGAACAATTCCAAGTTCGTCGGCGCCGGCCTCGGCGTGGACGTTGACTGGATGGTGGTGATTCTCACCACCGCAGAGCACGGTGGGAGCTTTGCCGGCTCCGGCGCCGGGTCGGTGGTGGCTTCAATGGGAGCGCCGGTGCTGGTGGTTCTGTTAGGGCTTTTCCTTGTGGGAAATCTGTGAGATTGTGAGAGTGTTCTCAGATTTGGCGCCAATGTTCGTTTCTTGGTTTGCAGTTTGTTTAGTATGTAAACGACGTCGTTTCATTTCAATTGAAAGTGTAATTTGAATTTTCTTTTATTAAAAAATATATATATATAT ATGCCTTCTTCTTCTTCTTCTTCCTACTCTCTCTTTGGCGTTGTCGCCATTGCCTTCCTCGTCTCCGTCTCCTCCCCTGTTCTCTCCTCCAAAGTTGAAGAAGATAAAGAAAACCTTCTGCAAGGCCTAAACGGCTACCGACAAGCACAGAAGCTCCCGCCGTTTGAAAAGAACGCAAAAGCCTACTGCATCGCAGAAAAAATCGCCGAGGTAGACAAGGACCATCCCTGCAACATTACCACCGCTAATTCAACCGTCACCGCACGCCACCTCTCGCAGATTGAGAATTTCGAGCATTACGCCGAGAAATGCAAGGTCGACCTCAACACCACCGCCGACGCCATCGTGATGCCGGTGTGTGTACCGGATATGGTTGAGCCTATGCTGCTTGCCAACTACACGCAAACGCAGTACGCCCAGTATTTGAACAATTCCAAGTTCGTCGGCGCCGGCCTCGGCGTGGACGTTGACTGGATGGTGGTGATTCTCACCACCGCAGAGCACGGTGGGAGCTTTGCCGGCTCCGGCGCCGGGTCGGTGGTGGCTTCAATGGGAGCGCCGGTGCTGGTGGTTCTGTTAGGGCTTTTCCTTGTGGGAAATCTGTGA MPSSSSSSYSLFGVVAIAFLVSVSSPVLSSKVEEDKENLLQGLNGYRQAQKLPPFEKNAKAYCIAEKIAEVDKDHPCNITTANSTVTARHLSQIENFEHYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQTQYAQYLNNSKFVGAGLGVDVDWMVVILTTAEHGGSFAGSGAGSVVASMGAPVLVVLLGLFLVGNL Homology
BLAST of CmoCh12G010940 vs. ExPASy Swiss-Prot
Match: Q84MC0 (Uncharacterized GPI-anchored protein At3g06035 OS=Arabidopsis thaliana OX=3702 GN=At3g06035 PE=2 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 4.7e-26 Identity = 62/157 (39.49%), Postives = 95/157 (60.51%), Query Frame = 0
BLAST of CmoCh12G010940 vs. ExPASy Swiss-Prot
Match: P59833 (Uncharacterized GPI-anchored protein At5g19250 OS=Arabidopsis thaliana OX=3702 GN=At5g19250 PE=2 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 7.0e-22 Identity = 61/189 (32.28%), Postives = 108/189 (57.14%), Query Frame = 0
BLAST of CmoCh12G010940 vs. ExPASy Swiss-Prot
Match: Q84VZ5 (Uncharacterized GPI-anchored protein At5g19240 OS=Arabidopsis thaliana OX=3702 GN=At5g19240 PE=2 SV=2) HSP 1 Score: 96.3 bits (238), Expect = 4.2e-19 Identity = 58/164 (35.37%), Postives = 94/164 (57.32%), Query Frame = 0
BLAST of CmoCh12G010940 vs. ExPASy Swiss-Prot
Match: Q8GUL8 (Uncharacterized GPI-anchored protein At5g19230 OS=Arabidopsis thaliana OX=3702 GN=At5g19230 PE=2 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 3.0e-09 Identity = 55/183 (30.05%), Postives = 83/183 (45.36%), Query Frame = 0
BLAST of CmoCh12G010940 vs. ExPASy TrEMBL
Match: A0A6J1FD58 (uncharacterized GPI-anchored protein At3g06035-like OS=Cucurbita moschata OX=3662 GN=LOC111444309 PE=4 SV=1) HSP 1 Score: 389.0 bits (998), Expect = 1.2e-104 Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0
BLAST of CmoCh12G010940 vs. ExPASy TrEMBL
Match: A0A6J1HN14 (uncharacterized GPI-anchored protein At3g06035-like OS=Cucurbita maxima OX=3661 GN=LOC111465672 PE=4 SV=1) HSP 1 Score: 361.3 bits (926), Expect = 2.6e-96 Identity = 188/199 (94.47%), Postives = 192/199 (96.48%), Query Frame = 0
BLAST of CmoCh12G010940 vs. ExPASy TrEMBL
Match: A0A6J1KEG4 (uncharacterized GPI-anchored protein At3g06035-like OS=Cucurbita maxima OX=3661 GN=LOC111493609 PE=4 SV=1) HSP 1 Score: 229.9 bits (585), Expect = 9.1e-57 Identity = 123/194 (63.40%), Postives = 150/194 (77.32%), Query Frame = 0
BLAST of CmoCh12G010940 vs. ExPASy TrEMBL
Match: A0A6J1G4I7 (uncharacterized GPI-anchored protein At3g06035 OS=Cucurbita moschata OX=3662 GN=LOC111450734 PE=4 SV=1) HSP 1 Score: 226.5 bits (576), Expect = 1.0e-55 Identity = 123/197 (62.44%), Postives = 151/197 (76.65%), Query Frame = 0
BLAST of CmoCh12G010940 vs. ExPASy TrEMBL
Match: A0A6J1DAZ7 (uncharacterized GPI-anchored protein At3g06035 OS=Momordica charantia OX=3673 GN=LOC111018803 PE=4 SV=1) HSP 1 Score: 219.5 bits (558), Expect = 1.2e-53 Identity = 117/197 (59.39%), Postives = 152/197 (77.16%), Query Frame = 0
BLAST of CmoCh12G010940 vs. TAIR 10
Match: AT1G54860.1 (Glycoprotein membrane precursor GPI-anchored ) HSP 1 Score: 157.5 bits (397), Expect = 1.1e-38 Identity = 86/192 (44.79%), Postives = 128/192 (66.67%), Query Frame = 0
BLAST of CmoCh12G010940 vs. TAIR 10
Match: AT3G06035.1 (Glycoprotein membrane precursor GPI-anchored ) HSP 1 Score: 119.4 bits (298), Expect = 3.3e-27 Identity = 62/157 (39.49%), Postives = 95/157 (60.51%), Query Frame = 0
BLAST of CmoCh12G010940 vs. TAIR 10
Match: AT5G19250.1 (Glycoprotein membrane precursor GPI-anchored ) HSP 1 Score: 105.5 bits (262), Expect = 5.0e-23 Identity = 61/189 (32.28%), Postives = 108/189 (57.14%), Query Frame = 0
BLAST of CmoCh12G010940 vs. TAIR 10
Match: AT5G19240.1 (Glycoprotein membrane precursor GPI-anchored ) HSP 1 Score: 96.3 bits (238), Expect = 3.0e-20 Identity = 58/164 (35.37%), Postives = 94/164 (57.32%), Query Frame = 0
BLAST of CmoCh12G010940 vs. TAIR 10
Match: AT5G19230.1 (Glycoprotein membrane precursor GPI-anchored ) HSP 1 Score: 63.5 bits (153), Expect = 2.2e-10 Identity = 55/183 (30.05%), Postives = 83/183 (45.36%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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