CmoCh12G010940 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh12G010940
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionGlycoprotein membrane precursor GPI-anchored
LocationCmo_Chr12: 10014405 .. 10016602 (-)
RNA-Seq ExpressionCmoCh12G010940
SyntenyCmoCh12G010940
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTTCTTCTTCTTCTTCTTCCTACTCTCTCTTTGGCGTTGTCGCCATTGCCTTCCTCGTCTCCGTCTCCTCCCCTGTTCTCTCCTCCAAAGGTATAGTTTTCTCTCCCTCTCTCGTGCTTTTCTGGGTTCGTGTTTCTTTCGATTTTTCATTTGGGAATTTCTTGTTGAAGGGTCACTAGTAGATACATGTGTTGAAGGGTCACTCGTAGATACATGTATGAATAGATACATGTGTTGAAGGGTCACTAGTAGATACATGTATGAATAGATACATGTGTTGAAGGGTCACTAATAGATACATGTGTTGAAGGGTCATTGGTAGATACATGTATGAATAGATACATGTGTTGAAGGGTCACTCGTAGATATATGTATGAATAGATATATGTGTTGAAGAGTCACTCGTAGATACATGTGTTGAATGGTCACTAGTAGATACATGTGTTGAAGGGTCACTAGTAGATATGAATAGATATAAGTAGGTTCCATTAGTTCCTAATTAAATAGATGCATGACTTTTTGGATAATGAATGGTAACAGGGAATGTCCCAAATTACCTATATGTATGTTGGTATTGGTGGAAGAAGTAGAAAATCAATCCAGCATTCCTTCATAATTTTATAAAGTTCTCTTCTTTTCAAGAATTCTACCAAATTTCTCTGTTGTCACTGACATTTCTATATATATATATCAGAATTTCTAACCGAGCTGGGATCGAAAAAACCAAGAAAAATGCATTTTTCTTTAGGAATTTATATGGAAATGACAGTCTGAGCATTGGAGCAATAAAAAACCTTCCAATTTTGGGAACATAACAATGAATTTGTTCCTTCATTGCTATCAATCTGTACAAAACTTGTAAGAATATCTTAGAGAATTGTTTTTTAATCCAATCTGATACAAAATACTTCTCTATTTGATAGGGATGGTTAGATGAACACGATTCTCTACAATGCTATGATATTGTCCACTTTGAGTATAAGTTCTTATAGCTTTGCTTTGGGCTTCCAAAAGACCTCGTACCAATGGAGATAGTATTCCTTGATATTATAAACTCATGATCATTCCTTAAATTAGCTGAGGTGGGACTTTTATCATCCAACACCTCCCCTTAAACAAAGTACGCCTCCCATTAATCGAGGCTCAACTTCTTTTTCTTTTGGAGTCCTTTGTTCGACATTTGAGGATTTACCAATCTATTGGCACGACTAAGTTTAGGGCATAGCTTTGATACCATGTTAGATGAACACGACTCTCCACAATGGTATGATATTGTCCACTTTGAGCCTAAGCTTTCATGACTTTACTTTGGTTTTCCCTCCAAAAGGCCTCATACCAATAGAGGTAGTATTCCTTGATTATAAATCCATTATCATTCCCTAAATTAGCCGAAGTGGGACTTTTATCATCCAATAAGTACTTCAAATGACATTAAATGTTTTGATTAAGAAAATTAAAAACAAACAAACAAGCTCGTGAAACATGGAGGACAACAGTCTGCATATGAATGCTCTGAAAAAAATTTGCCAATTACCTGACTGCAGTTGAAGAAGATAAAGAAAACCTTCTGCAAGGCCTAAACGGCTACCGACAAGCACAGAAGCTCCCGCCGTTTGAAAAGAACGCAAAAGCCTACTGCATCGCAGAAAAAATCGCCGAGGTAGACAAGGACCATCCCTGCAACATTACCACCGCTAATTCAACCGTCACCGCACGCCACCTCTCGCAGATTGAGAATTTCGAGCATTACGCCGAGAAATGCAAGGTCGACCTCAACACCACCGCCGACGCCATCGTGATGCCGGTGTGTGTACCGGATATGGTTGAGCCTATGCTGCTTGCCAACTACACGCAAACGCAGTACGCCCAGTATTTGAACAATTCCAAGTTCGTCGGCGCCGGCCTCGGCGTGGACGTTGACTGGATGGTGGTGATTCTCACCACCGCAGAGCACGGTGGGAGCTTTGCCGGCTCCGGCGCCGGGTCGGTGGTGGCTTCAATGGGAGCGCCGGTGCTGGTGGTTCTGTTAGGGCTTTTCCTTGTGGGAAATCTGTGAGATTGTGAGAGTGTTCTCAGATTTGGCGCCAATGTTCGTTTCTTGGTTTGCAGTTTGTTTAGTATGTAAACGACGTCGTTTCATTTCAATTGAAAGTGTAATTTGAATTTTCTTTTATTAAAAAATATATATATATAT

mRNA sequence

ATGCCTTCTTCTTCTTCTTCTTCCTACTCTCTCTTTGGCGTTGTCGCCATTGCCTTCCTCGTCTCCGTCTCCTCCCCTGTTCTCTCCTCCAAAGTTGAAGAAGATAAAGAAAACCTTCTGCAAGGCCTAAACGGCTACCGACAAGCACAGAAGCTCCCGCCGTTTGAAAAGAACGCAAAAGCCTACTGCATCGCAGAAAAAATCGCCGAGGTAGACAAGGACCATCCCTGCAACATTACCACCGCTAATTCAACCGTCACCGCACGCCACCTCTCGCAGATTGAGAATTTCGAGCATTACGCCGAGAAATGCAAGGTCGACCTCAACACCACCGCCGACGCCATCGTGATGCCGGTGTGTGTACCGGATATGGTTGAGCCTATGCTGCTTGCCAACTACACGCAAACGCAGTACGCCCAGTATTTGAACAATTCCAAGTTCGTCGGCGCCGGCCTCGGCGTGGACGTTGACTGGATGGTGGTGATTCTCACCACCGCAGAGCACGGTGGGAGCTTTGCCGGCTCCGGCGCCGGGTCGGTGGTGGCTTCAATGGGAGCGCCGGTGCTGGTGGTTCTGTTAGGGCTTTTCCTTGTGGGAAATCTGTGAGATTGTGAGAGTGTTCTCAGATTTGGCGCCAATGTTCGTTTCTTGGTTTGCAGTTTGTTTAGTATGTAAACGACGTCGTTTCATTTCAATTGAAAGTGTAATTTGAATTTTCTTTTATTAAAAAATATATATATATAT

Coding sequence (CDS)

ATGCCTTCTTCTTCTTCTTCTTCCTACTCTCTCTTTGGCGTTGTCGCCATTGCCTTCCTCGTCTCCGTCTCCTCCCCTGTTCTCTCCTCCAAAGTTGAAGAAGATAAAGAAAACCTTCTGCAAGGCCTAAACGGCTACCGACAAGCACAGAAGCTCCCGCCGTTTGAAAAGAACGCAAAAGCCTACTGCATCGCAGAAAAAATCGCCGAGGTAGACAAGGACCATCCCTGCAACATTACCACCGCTAATTCAACCGTCACCGCACGCCACCTCTCGCAGATTGAGAATTTCGAGCATTACGCCGAGAAATGCAAGGTCGACCTCAACACCACCGCCGACGCCATCGTGATGCCGGTGTGTGTACCGGATATGGTTGAGCCTATGCTGCTTGCCAACTACACGCAAACGCAGTACGCCCAGTATTTGAACAATTCCAAGTTCGTCGGCGCCGGCCTCGGCGTGGACGTTGACTGGATGGTGGTGATTCTCACCACCGCAGAGCACGGTGGGAGCTTTGCCGGCTCCGGCGCCGGGTCGGTGGTGGCTTCAATGGGAGCGCCGGTGCTGGTGGTTCTGTTAGGGCTTTTCCTTGTGGGAAATCTGTGA

Protein sequence

MPSSSSSSYSLFGVVAIAFLVSVSSPVLSSKVEEDKENLLQGLNGYRQAQKLPPFEKNAKAYCIAEKIAEVDKDHPCNITTANSTVTARHLSQIENFEHYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQTQYAQYLNNSKFVGAGLGVDVDWMVVILTTAEHGGSFAGSGAGSVVASMGAPVLVVLLGLFLVGNL
Homology
BLAST of CmoCh12G010940 vs. ExPASy Swiss-Prot
Match: Q84MC0 (Uncharacterized GPI-anchored protein At3g06035 OS=Arabidopsis thaliana OX=3702 GN=At3g06035 PE=2 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 4.7e-26
Identity = 62/157 (39.49%), Postives = 95/157 (60.51%), Query Frame = 0

Query: 17  IAFLVSVSSPVLSSKVEEDKENLLQGLNGYRQAQKLPPFEKNAKAYCIAEKIAEVDKDHP 76
           ++ L+ ++ PVLS   EED   LL G+N YR  Q L    KN  A C+A++IA+  K+ P
Sbjct: 12  LSILLCLNRPVLSDTDEED--ILLTGINSYRTTQNLTILSKNENAECLADEIADQFKNKP 71

Query: 77  CNITTANSTVTARHLSQIENFEHYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQT 136
           C   T ++TV      Q  N+     KC ++++ T D  +MP CVP +   ++L N+T++
Sbjct: 72  CTNDTGSATVPGTE-PQFANYPQILAKCHLNVSDTRDGSIMPACVPRLESNLVLTNFTKS 131

Query: 137 QYAQYLNNSKFVGAGLGVDVDWMVVILTTAEHGGSFA 174
           QY+  LN+SKF G G+G + DW+VV+LTT    GS++
Sbjct: 132 QYSMSLNDSKFTGIGIGKEDDWIVVVLTTNTPEGSYS 165

BLAST of CmoCh12G010940 vs. ExPASy Swiss-Prot
Match: P59833 (Uncharacterized GPI-anchored protein At5g19250 OS=Arabidopsis thaliana OX=3702 GN=At5g19250 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 7.0e-22
Identity = 61/189 (32.28%), Postives = 108/189 (57.14%), Query Frame = 0

Query: 17  IAFLVSV---SSPVLSSKVEEDKENLLQGLNGYRQAQKLPPFEKNAKAYCIAEKIAEVDK 76
           + FL+SV     P++ S   ++++ LL G+N YR +  L     N  A C+A++IA+  K
Sbjct: 8   LLFLLSVFLSLHPLVLSDTADEEDVLLTGINSYRASLNLTTLIHNHNAECLADEIADQFK 67

Query: 77  DHPCNITTANSTVTARHLSQIENFEHYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANY 136
           + PC  TT +++V         N  +   KC+++   T D  ++P CVP++   ++L N+
Sbjct: 68  NQPCTNTTGSASVPGT-TPGFPNLPNLLSKCRLNPTVTRDGAILPACVPNLDPSLVLTNF 127

Query: 137 TQTQYAQYLNNSKFVGAGLGVDVDWMVVILTTAEHGGSF-----AGSGAGSVVASMGAPV 196
           T +QY++ LN+SKF G G+G D +W+VV+LTT+   GS+     +G+ A  V   + + +
Sbjct: 128 TMSQYSKDLNDSKFTGIGIGSDDNWIVVVLTTSTPEGSYSPASNSGAFAFGVNGLVSSSL 187

Query: 197 LVVLLGLFL 198
           + +L   F+
Sbjct: 188 MFLLFCFFM 195

BLAST of CmoCh12G010940 vs. ExPASy Swiss-Prot
Match: Q84VZ5 (Uncharacterized GPI-anchored protein At5g19240 OS=Arabidopsis thaliana OX=3702 GN=At5g19240 PE=2 SV=2)

HSP 1 Score: 96.3 bits (238), Expect = 4.2e-19
Identity = 58/164 (35.37%), Postives = 94/164 (57.32%), Query Frame = 0

Query: 17  IAFLVSVSSPVLSSKVEEDKENLL-QGLNGYRQAQKLPPFEKNAKAYCIAEKIAEVDKDH 76
           ++  +S+  PVLS+    D ENLL    N YR++  L   +KN  A C+A+++ +  ++ 
Sbjct: 13  LSVFLSLHRPVLSN---TDGENLLFTVFNQYRESVNLTNLKKNKNAECLADEVVDQLQNQ 72

Query: 77  PCNITTANSTVTARHLSQIENFEHYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQ 136
           PC  TT +++V       I NF +   KC+++ N T D +++ VC P       L+++  
Sbjct: 73  PCTNTTGSASVPGTD-PGIPNFPNLLAKCRLNTNVTRDGLILQVCAPKHHSTPDLSSFAN 132

Query: 137 TQYAQYLNNSKFVGAGLGVDVD--WMVVILTTAEHGGSFAGSGA 178
               + LN+SKF GAG+G+D D  W+V +LTT   GGS++ SGA
Sbjct: 133 V-LTKNLNDSKFTGAGVGIDSDGIWLVTVLTTNTPGGSYSNSGA 171

BLAST of CmoCh12G010940 vs. ExPASy Swiss-Prot
Match: Q8GUL8 (Uncharacterized GPI-anchored protein At5g19230 OS=Arabidopsis thaliana OX=3702 GN=At5g19230 PE=2 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 3.0e-09
Identity = 55/183 (30.05%), Postives = 83/183 (45.36%), Query Frame = 0

Query: 17  IAFLVSVSSPVLSSKVEEDKENLLQGLNGYRQAQKLPPFEKNAKAYCIAEKIAEVDKDHP 76
           ++  +S+   VLS    ED + LL   N YR    L    KN  A C+A+++ +  K+ P
Sbjct: 12  LSVFLSLHRLVLSGTDGED-DLLLTVFNKYRTGLNLKTLTKNENAECLADEVVDQLKNQP 71

Query: 77  CNITTANSTVTARHLSQIENFEHYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQT 136
           C  T  ++ V   +L           KC ++     D ++M VC P   +   L+N+   
Sbjct: 72  CTNTNNSAPVPGNNL---------LAKCSLNTTVVRDGVIMQVCFPKHDKNPDLSNFNSV 131

Query: 137 QYAQYLNNSKFVGAGLGVDVDWMVVILTT-AEHGGSFAGSGAGSVVASMGAPVLVVLLGL 196
              + LN+SK  G G+G    W+VVILTT    GG    +   S   + G   LV    L
Sbjct: 132 -VLKNLNDSKITGIGIGSGDIWVVVILTTNTPEGGYSLLTTTNSGAYAFGVNGLVSSSFL 183

Query: 197 FLV 199
           FL+
Sbjct: 192 FLL 183

BLAST of CmoCh12G010940 vs. ExPASy TrEMBL
Match: A0A6J1FD58 (uncharacterized GPI-anchored protein At3g06035-like OS=Cucurbita moschata OX=3662 GN=LOC111444309 PE=4 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 1.2e-104
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0

Query: 1   MPSSSSSSYSLFGVVAIAFLVSVSSPVLSSKVEEDKENLLQGLNGYRQAQKLPPFEKNAK 60
           MPSSSSSSYSLFGVVAIAFLVSVSSPVLSSKVEEDKENLLQGLNGYRQAQKLPPFEKNAK
Sbjct: 1   MPSSSSSSYSLFGVVAIAFLVSVSSPVLSSKVEEDKENLLQGLNGYRQAQKLPPFEKNAK 60

Query: 61  AYCIAEKIAEVDKDHPCNITTANSTVTARHLSQIENFEHYAEKCKVDLNTTADAIVMPVC 120
           AYCIAEKIAEVDKDHPCNITTANSTVTARHLSQIENFEHYAEKCKVDLNTTADAIVMPVC
Sbjct: 61  AYCIAEKIAEVDKDHPCNITTANSTVTARHLSQIENFEHYAEKCKVDLNTTADAIVMPVC 120

Query: 121 VPDMVEPMLLANYTQTQYAQYLNNSKFVGAGLGVDVDWMVVILTTAEHGGSFAGSGAGSV 180
           VPDMVEPMLLANYTQTQYAQYLNNSKFVGAGLGVDVDWMVVILTTAEHGGSFAGSGAGSV
Sbjct: 121 VPDMVEPMLLANYTQTQYAQYLNNSKFVGAGLGVDVDWMVVILTTAEHGGSFAGSGAGSV 180

Query: 181 VASMGAPVLVVLLGLFLVGNL 202
           VASMGAPVLVVLLGLFLVGNL
Sbjct: 181 VASMGAPVLVVLLGLFLVGNL 201

BLAST of CmoCh12G010940 vs. ExPASy TrEMBL
Match: A0A6J1HN14 (uncharacterized GPI-anchored protein At3g06035-like OS=Cucurbita maxima OX=3661 GN=LOC111465672 PE=4 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 2.6e-96
Identity = 188/199 (94.47%), Postives = 192/199 (96.48%), Query Frame = 0

Query: 3   SSSSSSYSLFGVVAIAFLVSVSSPVLSSKVEEDKENLLQGLNGYRQAQKLPPFEKNAKAY 62
           +SSSSS+SLFGV AIAFLV  SSPVLS KVEEDKENLLQGLNGYRQAQKLPPFEKNAKA 
Sbjct: 2   ASSSSSFSLFGVFAIAFLVFGSSPVLSFKVEEDKENLLQGLNGYRQAQKLPPFEKNAKAC 61

Query: 63  CIAEKIAEVDKDHPCNITTANSTVTARHLSQIENFEHYAEKCKVDLNTTADAIVMPVCVP 122
           CIA+KIA+VDKDHPCNITTANSTVTARHLSQI NFEHYAEKCKVDLNTTADAIVMPVCVP
Sbjct: 62  CIADKIADVDKDHPCNITTANSTVTARHLSQIANFEHYAEKCKVDLNTTADAIVMPVCVP 121

Query: 123 DMVEPMLLANYTQTQYAQYLNNSKFVGAGLGVDVDWMVVILTTAEHGGSFAGSGAGSVVA 182
           DMVEPMLLANYTQTQYAQYLNNSKFVGAGLGVDVDWMVVILTTAEHGGSFAGSGAGSVVA
Sbjct: 122 DMVEPMLLANYTQTQYAQYLNNSKFVGAGLGVDVDWMVVILTTAEHGGSFAGSGAGSVVA 181

Query: 183 SMGAPVLVVLLGLFLVGNL 202
           SMGA VLVVLLGLFLVGNL
Sbjct: 182 SMGASVLVVLLGLFLVGNL 200

BLAST of CmoCh12G010940 vs. ExPASy TrEMBL
Match: A0A6J1KEG4 (uncharacterized GPI-anchored protein At3g06035-like OS=Cucurbita maxima OX=3661 GN=LOC111493609 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 9.1e-57
Identity = 123/194 (63.40%), Postives = 150/194 (77.32%), Query Frame = 0

Query: 4   SSSSSYSLFGVVAIAFLVSVSSPVLSSKVEEDKENLLQGLNGYRQAQKLPPFEKNAKAYC 63
           SS SS+S+FGV AIAFL   SSPVLS   +++++NLLQGLN YRQAQ LPP  KNAKA C
Sbjct: 2   SSLSSFSIFGVFAIAFLF-FSSPVLS---KDEEDNLLQGLNSYRQAQNLPPLAKNAKADC 61

Query: 64  IAEKIAEVDKDHPCNITTANSTVTARHLSQIENFEHYAEKCKVDLNTTADAIVMPVCVPD 123
           IA++IA+ +KD PC +TTA S V     SQI  F  YAEKCKVD+NTT DAIVMPVCVP 
Sbjct: 62  IADEIADDNKDQPCAVTTAKSNVVPSRPSQITKFMDYAEKCKVDINTTTDAIVMPVCVPK 121

Query: 124 MVEPMLLANYTQTQYAQYLNNSKFVGAGLGVDVDWMVVILTTAEHGGSFAGSGAGSVVAS 183
           +V+ +LLANYT +QYA+YLN+S+FVGAG+G + DWMVV+LTT   GGSF GSG GS+VAS
Sbjct: 122 LVQTLLLANYTHSQYAKYLNDSRFVGAGVGSEDDWMVVVLTTGASGGSFEGSGTGSLVAS 181

Query: 184 MGAPVLVVLLGLFL 198
           +   V + LLGL +
Sbjct: 182 VWGCVALALLGLMI 191

BLAST of CmoCh12G010940 vs. ExPASy TrEMBL
Match: A0A6J1G4I7 (uncharacterized GPI-anchored protein At3g06035 OS=Cucurbita moschata OX=3662 GN=LOC111450734 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 1.0e-55
Identity = 123/197 (62.44%), Postives = 151/197 (76.65%), Query Frame = 0

Query: 4   SSSSSYSLFGVVAIAFLVSVSSPVLSSKVEEDKENLLQGLNGYRQAQKLPPFEKNAKAYC 63
           SS S +S+FGV AIAFL   SSPVLS   +++++NLLQGLN YRQAQ LPP  KNAKA C
Sbjct: 2   SSPSYFSIFGVFAIAFLF-FSSPVLS---KDEEDNLLQGLNSYRQAQNLPPLAKNAKADC 61

Query: 64  IAEKIAEVDKDHPCNITTANSTVTARHLSQIENFEHYAEKCKVDLNTTADAIVMPVCVPD 123
           IAE+IA+ +KD PC +TTA S V     SQI  F  YAEKCKVD+NTT DAIVMPVCVP 
Sbjct: 62  IAEEIADDNKDQPCAVTTAKSNVVPSRPSQITKFMDYAEKCKVDINTTTDAIVMPVCVPK 121

Query: 124 MVEPMLLANYTQTQYAQYLNNSKFVGAGLGVDVDWMVVILTTAEHGGSFAGSGAGSVVAS 183
           +V+ +LLANYT +QYA+YLN+S+FVGAG+G + DWMVV+LTT   GGSF GSG  S++AS
Sbjct: 122 LVQTLLLANYTHSQYAKYLNDSRFVGAGVGSEDDWMVVVLTTGASGGSFEGSGTESLMAS 181

Query: 184 MGAPVLVVLLGLFLVGN 201
           +   V + LLGL ++GN
Sbjct: 182 VWGCVALALLGL-MIGN 193

BLAST of CmoCh12G010940 vs. ExPASy TrEMBL
Match: A0A6J1DAZ7 (uncharacterized GPI-anchored protein At3g06035 OS=Momordica charantia OX=3673 GN=LOC111018803 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 1.2e-53
Identity = 117/197 (59.39%), Postives = 152/197 (77.16%), Query Frame = 0

Query: 1   MPSSSSSSYSLFGVVAIAFLVSVSSPVLSSKVEEDKENLLQGLNGYRQAQKLPPFEKNAK 60
           M  +SSS ++   ++AIAFL+  S+PVLS   +++++NLLQGLN YRQAQ LPP  KNAK
Sbjct: 5   MAMASSSFFAFSSLIAIAFLL-FSAPVLS---KDEEDNLLQGLNSYRQAQNLPPLTKNAK 64

Query: 61  AYCIAEKIAEVDKDHPCNITTANSTVTARHLSQIENFEHYAEKCKVDLNTTADAIVMPVC 120
           A CIA +IA+  KD PC++TTA S V A   SQ+  F+ YAEKCKVD+N+TADA+ MPVC
Sbjct: 65  ADCIANEIADDAKDQPCSVTTAKSNVVASRPSQLTKFQDYAEKCKVDVNSTADAVAMPVC 124

Query: 121 VPDMVEPMLLANYTQTQYAQYLNNSKFVGAGLGVDVDWMVVILTTAEHGGSFAGSGAGSV 180
           VP +V+ +LLANYT +QYA+YLN+S+FVGAGLG + DWMVV+LTT   GGSFAGSGA S+
Sbjct: 125 VPKLVQTLLLANYTHSQYARYLNDSRFVGAGLGKEDDWMVVVLTTGGPGGSFAGSGAVSI 184

Query: 181 VASMGAPVLVVLLGLFL 198
             S+G   ++VLLGL +
Sbjct: 185 GGSVG--TMMVLLGLLI 195

BLAST of CmoCh12G010940 vs. TAIR 10
Match: AT1G54860.1 (Glycoprotein membrane precursor GPI-anchored )

HSP 1 Score: 157.5 bits (397), Expect = 1.1e-38
Identity = 86/192 (44.79%), Postives = 128/192 (66.67%), Query Frame = 0

Query: 12  FGVVAIAFLVSVSSPVLSSKVEEDKENLLQGLNGYRQAQKLPPFEKNAKAYCIAEKIAEV 71
           F ++ +     +S+ V+S++ E   +NLLQGLN YR AQ++PPF KN KA C+A++IA+ 
Sbjct: 11  FYIIHLLIFSLISTCVVSNQAE---DNLLQGLNSYRTAQRVPPFAKNEKADCVADEIADK 70

Query: 72  DKDHPCNITTANSTVTARHL-SQIENFEHYAEKCKVDLNTTADAIVMPVCVPDMVEPMLL 131
            +D PC   T  STVT   +  ++ N++    +CK+D NTT D +++PVC+P+ +  + L
Sbjct: 71  LEDQPCTNHTTASTVTPGSVPPRLTNYQDILSECKIDPNTTRDGLILPVCIPNRIPTLAL 130

Query: 132 ANYTQTQYAQYLNNSKFVGAGLGVDVDWMVVILTTAEHGGSF-AGSGAGSVVASMGAPVL 191
            NYTQT YA+YLN+S++VGAG+G + +WMVV+LTT+  GGSF AG  AG       A  +
Sbjct: 131 TNYTQTGYARYLNDSRYVGAGVGSEKEWMVVVLTTSTPGGSFTAGVAAGK------ATSV 190

Query: 192 VVLLGLFLVGNL 202
            V+ GL L+G L
Sbjct: 191 RVMAGLGLMGLL 193

BLAST of CmoCh12G010940 vs. TAIR 10
Match: AT3G06035.1 (Glycoprotein membrane precursor GPI-anchored )

HSP 1 Score: 119.4 bits (298), Expect = 3.3e-27
Identity = 62/157 (39.49%), Postives = 95/157 (60.51%), Query Frame = 0

Query: 17  IAFLVSVSSPVLSSKVEEDKENLLQGLNGYRQAQKLPPFEKNAKAYCIAEKIAEVDKDHP 76
           ++ L+ ++ PVLS   EED   LL G+N YR  Q L    KN  A C+A++IA+  K+ P
Sbjct: 12  LSILLCLNRPVLSDTDEED--ILLTGINSYRTTQNLTILSKNENAECLADEIADQFKNKP 71

Query: 77  CNITTANSTVTARHLSQIENFEHYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQT 136
           C   T ++TV      Q  N+     KC ++++ T D  +MP CVP +   ++L N+T++
Sbjct: 72  CTNDTGSATVPGTE-PQFANYPQILAKCHLNVSDTRDGSIMPACVPRLESNLVLTNFTKS 131

Query: 137 QYAQYLNNSKFVGAGLGVDVDWMVVILTTAEHGGSFA 174
           QY+  LN+SKF G G+G + DW+VV+LTT    GS++
Sbjct: 132 QYSMSLNDSKFTGIGIGKEDDWIVVVLTTNTPEGSYS 165

BLAST of CmoCh12G010940 vs. TAIR 10
Match: AT5G19250.1 (Glycoprotein membrane precursor GPI-anchored )

HSP 1 Score: 105.5 bits (262), Expect = 5.0e-23
Identity = 61/189 (32.28%), Postives = 108/189 (57.14%), Query Frame = 0

Query: 17  IAFLVSV---SSPVLSSKVEEDKENLLQGLNGYRQAQKLPPFEKNAKAYCIAEKIAEVDK 76
           + FL+SV     P++ S   ++++ LL G+N YR +  L     N  A C+A++IA+  K
Sbjct: 8   LLFLLSVFLSLHPLVLSDTADEEDVLLTGINSYRASLNLTTLIHNHNAECLADEIADQFK 67

Query: 77  DHPCNITTANSTVTARHLSQIENFEHYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANY 136
           + PC  TT +++V         N  +   KC+++   T D  ++P CVP++   ++L N+
Sbjct: 68  NQPCTNTTGSASVPGT-TPGFPNLPNLLSKCRLNPTVTRDGAILPACVPNLDPSLVLTNF 127

Query: 137 TQTQYAQYLNNSKFVGAGLGVDVDWMVVILTTAEHGGSF-----AGSGAGSVVASMGAPV 196
           T +QY++ LN+SKF G G+G D +W+VV+LTT+   GS+     +G+ A  V   + + +
Sbjct: 128 TMSQYSKDLNDSKFTGIGIGSDDNWIVVVLTTSTPEGSYSPASNSGAFAFGVNGLVSSSL 187

Query: 197 LVVLLGLFL 198
           + +L   F+
Sbjct: 188 MFLLFCFFM 195

BLAST of CmoCh12G010940 vs. TAIR 10
Match: AT5G19240.1 (Glycoprotein membrane precursor GPI-anchored )

HSP 1 Score: 96.3 bits (238), Expect = 3.0e-20
Identity = 58/164 (35.37%), Postives = 94/164 (57.32%), Query Frame = 0

Query: 17  IAFLVSVSSPVLSSKVEEDKENLL-QGLNGYRQAQKLPPFEKNAKAYCIAEKIAEVDKDH 76
           ++  +S+  PVLS+    D ENLL    N YR++  L   +KN  A C+A+++ +  ++ 
Sbjct: 13  LSVFLSLHRPVLSN---TDGENLLFTVFNQYRESVNLTNLKKNKNAECLADEVVDQLQNQ 72

Query: 77  PCNITTANSTVTARHLSQIENFEHYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQ 136
           PC  TT +++V       I NF +   KC+++ N T D +++ VC P       L+++  
Sbjct: 73  PCTNTTGSASVPGTD-PGIPNFPNLLAKCRLNTNVTRDGLILQVCAPKHHSTPDLSSFAN 132

Query: 137 TQYAQYLNNSKFVGAGLGVDVD--WMVVILTTAEHGGSFAGSGA 178
               + LN+SKF GAG+G+D D  W+V +LTT   GGS++ SGA
Sbjct: 133 V-LTKNLNDSKFTGAGVGIDSDGIWLVTVLTTNTPGGSYSNSGA 171

BLAST of CmoCh12G010940 vs. TAIR 10
Match: AT5G19230.1 (Glycoprotein membrane precursor GPI-anchored )

HSP 1 Score: 63.5 bits (153), Expect = 2.2e-10
Identity = 55/183 (30.05%), Postives = 83/183 (45.36%), Query Frame = 0

Query: 17  IAFLVSVSSPVLSSKVEEDKENLLQGLNGYRQAQKLPPFEKNAKAYCIAEKIAEVDKDHP 76
           ++  +S+   VLS    ED + LL   N YR    L    KN  A C+A+++ +  K+ P
Sbjct: 12  LSVFLSLHRLVLSGTDGED-DLLLTVFNKYRTGLNLKTLTKNENAECLADEVVDQLKNQP 71

Query: 77  CNITTANSTVTARHLSQIENFEHYAEKCKVDLNTTADAIVMPVCVPDMVEPMLLANYTQT 136
           C  T  ++ V   +L           KC ++     D ++M VC P   +   L+N+   
Sbjct: 72  CTNTNNSAPVPGNNL---------LAKCSLNTTVVRDGVIMQVCFPKHDKNPDLSNFNSV 131

Query: 137 QYAQYLNNSKFVGAGLGVDVDWMVVILTT-AEHGGSFAGSGAGSVVASMGAPVLVVLLGL 196
              + LN+SK  G G+G    W+VVILTT    GG    +   S   + G   LV    L
Sbjct: 132 -VLKNLNDSKITGIGIGSGDIWVVVILTTNTPEGGYSLLTTTNSGAYAFGVNGLVSSSFL 183

Query: 197 FLV 199
           FL+
Sbjct: 192 FLL 183

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q84MC04.7e-2639.49Uncharacterized GPI-anchored protein At3g06035 OS=Arabidopsis thaliana OX=3702 G... [more]
P598337.0e-2232.28Uncharacterized GPI-anchored protein At5g19250 OS=Arabidopsis thaliana OX=3702 G... [more]
Q84VZ54.2e-1935.37Uncharacterized GPI-anchored protein At5g19240 OS=Arabidopsis thaliana OX=3702 G... [more]
Q8GUL83.0e-0930.05Uncharacterized GPI-anchored protein At5g19230 OS=Arabidopsis thaliana OX=3702 G... [more]
Match NameE-valueIdentityDescription
A0A6J1FD581.2e-104100.00uncharacterized GPI-anchored protein At3g06035-like OS=Cucurbita moschata OX=366... [more]
A0A6J1HN142.6e-9694.47uncharacterized GPI-anchored protein At3g06035-like OS=Cucurbita maxima OX=3661 ... [more]
A0A6J1KEG49.1e-5763.40uncharacterized GPI-anchored protein At3g06035-like OS=Cucurbita maxima OX=3661 ... [more]
A0A6J1G4I71.0e-5562.44uncharacterized GPI-anchored protein At3g06035 OS=Cucurbita moschata OX=3662 GN=... [more]
A0A6J1DAZ71.2e-5359.39uncharacterized GPI-anchored protein At3g06035 OS=Momordica charantia OX=3673 GN... [more]
Match NameE-valueIdentityDescription
AT1G54860.11.1e-3844.79Glycoprotein membrane precursor GPI-anchored [more]
AT3G06035.13.3e-2739.49Glycoprotein membrane precursor GPI-anchored [more]
AT5G19250.15.0e-2332.28Glycoprotein membrane precursor GPI-anchored [more]
AT5G19240.13.0e-2035.37Glycoprotein membrane precursor GPI-anchored [more]
AT5G19230.12.2e-1030.05Glycoprotein membrane precursor GPI-anchored [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33976OS07G0645000 PROTEINcoord: 14..198
NoneNo IPR availablePANTHERPTHR33976:SF2GLYCOPROTEIN MEMBRANE GPI-ANCHOREDcoord: 14..198

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh12G010940.1CmoCh12G010940.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane