CmoCh12G010670 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh12G010670
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
Descriptiondormancy-associated protein homolog 3 isoform X2
LocationCmo_Chr12: 9831682 .. 9834901 (+)
RNA-Seq ExpressionCmoCh12G010670
SyntenyCmoCh12G010670
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTTAACGCCCCAAATTTCTCTTTAAATATCTTCCCCACTGCCGCTTCTAAGCTCTTCAATATCGAGAACCGCCGCTTCCTCCGCCGTGACGGGACTTTAGCCATTTCTTCTCTTCTTCGATTTCCTGTTCCTTATGGGCTTACTTGACCAGCTTTGGGACGATACCGTCGCTGGACCCCGGCCAGATAGTGGCCTTGGCAAGCTTCGTAAACACTCCACGTTTACCGGGCGAAATAGCTCCGGCAGCAAGGGTACGCTATGGATATTTTTATTCCACTGCTTGCCATGTTGAACACGTCATCGAACTCGATAAACTTAATCTTGAAACCCTAATTTTAAGCTCAATAACGGAATATTGAGTACTCGTTTGATTTTTCTAGTTTAAAGTGGTTTAAACTGTAGGCTGATGATCGAATTGAGATTCTAGTTTTTTTTTATAAATTTCTTGATAAAAACCTACCGTTGATTTTTCTTGAGAAATAGCCAGCATCTCGGATTTGTCTCGCAATTTGACAGGATCTGTACCTTTGAACTGAAAAAGATGCTCAATCGATACCTTGAACTTCATGAAATCATAGTTTCTATGTTGACTATTCTTTTTTCTTGATTTTTTATTGAACTCTTTTTGGATCAGAGCTCGATGGCGGCAGCGCGAGATCGTACGGCGAAGAATCTTCACAATCGTCGGTGAGGATCACGAGGAGTATCATGATACTAAGGCCGCCAGGGTACCAGTCTGGTTCGCCGCCTATTTCACCGGCTGGATCTAGTTCTCCGGCATCGCCTTTTTCTGGTAAGTAACAGAGACGTCTTTTTTGCCCTTTCCTCTTTATGCAAAATTACCAATATGCCCTTCATGTAGAATCCAAATGCACTTTTATCTTTCAATACAAGTTGGAATAAAATTACACGAGGGGGGGTTTTTTGTCCTTTGGTTATGGCGTCGCCTTCATGATTGGACAGGCACAGAAAACGGTAGTGTATTTGGTGAAAAGATATGGTTCTAATTAAACCTGGATTGAAGAGCATCCTTCCATTGAAAGTGCTTCTGTTCGTTTAAATTCGATTGCCATTGAATATTTAATCCATTGACCCACCGTATTTATGGGGTTTCATTAGCAGTTTTCAGTTCAATCGTTTTCAAATTCATTGCATACTTCTCTTCTTGTGGACATAGTTATAGACTATTCTCCTGTTTTGTGGAGGTTGTTTGCCTTGCTCGTTGGTTGGCAGATCTTTGTCAAACAAGTAGAAGTATTTCGTGTGGTTCTGCTGATTTCTTATAAAAAGTTAAATGAAATAGGTGGGAATTGTGGTTTGGTTTGAAAACGTCGAGCTTACTTCATAAACATTCATGGTGGTCAAAGAAAAAATCTGGATCTTGTGAAATCATCATTGCAAACTTAATGTTCATTGTTTCTCTGTTTCAAAACCCTTGCTGCTTAAGTTTTTGCTCTGATGGGTTGAGTTGAACGTTACTAAAATCATTTAGAAATACCAATTTGATTATAGCTTAACTACTTAATCTTGAGGATTGTTGGGAGAGGAGTCCCATATTGGCTAATTAAGGGGTTGATTGTGGATTTATTAGTAAGGAGCTTTGTCTTCATCGGTATGACGCCTTTTGAGAAAACCAAAAGCAAAATCACGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGCGAAGCTTCGTATGTATCATCGTTGAACTAAAGAAGGATTGTTTAGAAATCGATTAGCAATAGAAAATTCTCTCTATAACGTTGTTTTGCTGTTGGGTTTGATGTTTCAAAGCTTGTTTTTAGTGGTCTTTTCCTGGATCGTTTGTCTTTCATATCGAAAATTTCCGTTCTTGTTTCCTATGTCTCTGATTTCCATACCTCATAAATTGTATCATGAAACTGTAAATTCATTAGTAATCGATGCATATACTAATTCTTGATTTCCCATCTCTTGGTATCATCTTTCAACTTTGTGTTTATTTATAAGTAATTTCTCCCTTTTGGAGGTAGGGAGTCCTTCCGGTTTCGAAGAAGGTCGATCTCCGACACATACACAAAGGCAACCGATAGTGGACCCGGGAGCCCTTCTTCTCCTCACAACATGTGAGATCTAATAAGCTGAGCTCTCTTATTCCCTTTCAACAATGTTCTCCAAAACCTTCATATATTCGTGTAATCTTAGTGTATCGTAACGTGGCTGTAGTAGTATGCATGTGAATTCTGTATGAAGGGTATTAGAATAAGTCTTGTAGTAGGAGGAAGAAGCTAAAATCGAGGGAGATTATGGTAATTTCGAGTACGTAGACGAGGGTACTATTGTAAATTAGGTATCAATGTTGTTGGTTTTGTCAGTGGAATGTAAAAGGGAAGTTGTTCTTTTCATGTGGACCTTATCACTGATTGATTGATTGTCTCTTTGGTTTCCCATTGGACAGTGCTTTGGTTAATGCAAGACAGCCCTGTTTTCTTTGAATGGTTGCTACAAAGCACCAAATCAATGGCTTTGGACAGATGCTCTTTTCAGGTTTTAATGCCATTCCTTCAAGTGTTTTGCTTTTGGATTCTGTTAGGCCTTGGATTTAATTAAGTAAAAGTTGGGTGGTGGGCTAGTTCTTTATTAGTGAATGTTCGTGTCACCTCCGACCTTCCATGAACGTTTTAGAACGATACTTAAAGTAGAAATGCATTAGAGTATTAGAAGAAAAATTGACATAATAATGGCCAGAAAGTCTGAACGAATGATATTTAGTGTAATAGTCTAAGTCCACCGCTAGCGGATATTGTTCACTTTAGGTTTTTTCTTATAGGCTTCCTCTTAAGGTTTTTAAAATCGGGCTGTTAGGGAGTTTTCGTACTTTATAAGGAATGTTTTGTTCCCTTCTCTGATCGATGTGAGATCTCACAATCCCCTCCCTTGAGGGCCTAGTATAACGGTCATGCTTGTCCAAGGCATGTCGTCCATGGTCGTATGCCCATGACACGTTGAAACCTTCGCCTTGTACTACTTTATTGCTTTCTTTTACCGTTTTCATGTTGTATTATTTCTTCATGACTATGCCTGGTAGACATGAAATGCCTCAAAATGTACTATAGGAGGATATGACTATTTGTCAACTTCTCCCTATCCGATAGTTATATGCAGTGAGTTGTTGCCTTTTGTTTACATTCCCGTATAACACCAATTTCAATAATTTCAATCTCTCTTTTGCTCT

mRNA sequence

GTTTAACGCCCCAAATTTCTCTTTAAATATCTTCCCCACTGCCGCTTCTAAGCTCTTCAATATCGAGAACCGCCGCTTCCTCCGCCGTGACGGGACTTTAGCCATTTCTTCTCTTCTTCGATTTCCTGTTCCTTATGGGCTTACTTGACCAGCTTTGGGACGATACCGTCGCTGGACCCCGGCCAGATAGTGGCCTTGGCAAGCTTCGTAAACACTCCACGTTTACCGGGCGAAATAGCTCCGGCAGCAAGGAGCTCGATGGCGGCAGCGCGAGATCGTACGGCGAAGAATCTTCACAATCGTCGGTGAGGATCACGAGGAGTATCATGATACTAAGGCCGCCAGGGTACCAGTCTGGTTCGCCGCCTATTTCACCGGCTGGATCTAGTTCTCCGGCATCGCCTTTTTCTGGTAGGGAGTCCTTCCGGTTTCGAAGAAGGTCGATCTCCGACACATACACAAAGGCAACCGATAGTGGACCCGGGAGCCCTTCTTCTCCTCACAACATGTGAGATCTAATAAGCTGAGCTCTCTTATTCCCTTTCAACAATGTTCTCCAAAACCTTCATATATTCGTGTAATCTTAGTGTATCGTAACGTGGCTGTAGTAGTATGCATGTGAATTCTGTATGAAGGGTATTAGAATAAGTCTTGTAGTAGGAGGAAGAAGCTAAAATCGAGGGAGATTATGGTAATTTCGAGTACGTAGACGAGGGTACTATTGTAAATTAGGTATCAATGTTGTTGGTTTTGTCAGTGGAATGTAAAAGGGAAGTTGTTCTTTTCATGTGGACCTTATCACTGATTGATTGATTGTCTCTTTGGTTTCCCATTGGACAGTGCTTTGGTTAATGCAAGACAGCCCTGTTTTCTTTGAATGGTTGCTACAAAGCACCAAATCAATGGCTTTGGACAGATGCTCTTTTCAGGTTTTAATGCCATTCCTTCAAGTGTTTTGCTTTTGGATTCTGTTAGGCCTTGGATTTAATTAAGTAAAAGTTGGGTGGTGGGCTAGTTCTTTATTAGTGAATGTTCGTGTCACCTCCGACCTTCCATGAACGTTTTAGAACGATACTTAAAGTAGAAATGCATTAGAGTATTAGAAGAAAAATTGACATAATAATGGCCAGAAAGTCTGAACGAATGATATTTAGTGTAATAGTCTAAGTCCACCGCTAGCGGATATTGTTCACTTTAGGTTTTTTCTTATAGGCTTCCTCTTAAGGTTTTTAAAATCGGGCTGTTAGGGAGTTTTCGTACTTTATAAGGAATGTTTTGTTCCCTTCTCTGATCGATGTGAGATCTCACAATCCCCTCCCTTGAGGGCCTAGTATAACGGTCATGCTTGTCCAAGGCATGTCGTCCATGGTCGTATGCCCATGACACGTTGAAACCTTCGCCTTGTACTACTTTATTGCTTTCTTTTACCGTTTTCATGTTGTATTATTTCTTCATGACTATGCCTGGTAGACATGAAATGCCTCAAAATGTACTATAGGAGGATATGACTATTTGTCAACTTCTCCCTATCCGATAGTTATATGCAGTGAGTTGTTGCCTTTTGTTTACATTCCCGTATAACACCAATTTCAATAATTTCAATCTCTCTTTTGCTCT

Coding sequence (CDS)

ATGGGCTTACTTGACCAGCTTTGGGACGATACCGTCGCTGGACCCCGGCCAGATAGTGGCCTTGGCAAGCTTCGTAAACACTCCACGTTTACCGGGCGAAATAGCTCCGGCAGCAAGGAGCTCGATGGCGGCAGCGCGAGATCGTACGGCGAAGAATCTTCACAATCGTCGGTGAGGATCACGAGGAGTATCATGATACTAAGGCCGCCAGGGTACCAGTCTGGTTCGCCGCCTATTTCACCGGCTGGATCTAGTTCTCCGGCATCGCCTTTTTCTGGTAGGGAGTCCTTCCGGTTTCGAAGAAGGTCGATCTCCGACACATACACAAAGGCAACCGATAGTGGACCCGGGAGCCCTTCTTCTCCTCACAACATGTGA

Protein sequence

MGLLDQLWDDTVAGPRPDSGLGKLRKHSTFTGRNSSGSKELDGGSARSYGEESSQSSVRITRSIMILRPPGYQSGSPPISPAGSSSPASPFSGRESFRFRRRSISDTYTKATDSGPGSPSSPHNM
Homology
[Close]
BLAST of CmoCh12G010670 vs. ExPASy Swiss-Prot
Match: Q8LD26 (Dormancy-associated protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At1g56220 PE=1 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 3.8e-34
Identity = 80/137 (58.39%), Postives = 100/137 (72.99%), Query Frame = 0 

Query: 1   MGLLDQLWDDTVAGPRPDSGLGKLRKHSTFTGRNSSGSKELDGGSARSYGEES-SQSSVR 60
           MGLLD LWDDTVAGPRP++GLGKLRKH TF+ R SSG+ + + GSARSYGE+S  + +V+
Sbjct: 1   MGLLDHLWDDTVAGPRPENGLGKLRKHHTFSFRPSSGNDQSEAGSARSYGEDSLPEEAVK 60

Query: 61  ITRSIMILRPPGYQSGSPPISPAGSSSPASPFS--------GRESFRFRRRSISDTYTKA 120
           +TRSIMI++PPGYQ  S P SPAGS+ P SPFS        G+E FRFRRRS SD + KA
Sbjct: 61  VTRSIMIIKPPGYQGSSAPASPAGSTPPLSPFSPPLSPFSGGKEPFRFRRRSTSDAFEKA 120

Query: 121 ---TDSGPGSPSSPHNM 126
              +++GP S    + M
Sbjct: 121 AGGSETGPRSSPPTYGM 137

[Close]
BLAST of CmoCh12G010670 vs. ExPASy Swiss-Prot
Match: F4HV65 (Dormancy-associated protein homolog 4 OS=Arabidopsis thaliana OX=3702 GN=At1g54070 PE=3 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 8.8e-07
Identity = 37/98 (37.76%), Postives = 49/98 (50.00%), Query Frame = 0 

Query: 1  MGLLDQLWDDTVAGPRPDSGLGKLRKHSTFTGRNSSGSKELDGGSARSYGEESSQSSVRI 60
          MG L +LWD+TVAGP PD+GLGKLRKH + +   SS                 S SS ++
Sbjct: 1  MGFLHKLWDETVAGPTPDNGLGKLRKHDSLSTVRSS---------------PPSLSSDQV 60

Query: 61 TRSIMILRPPGYQSG------SPPISPAGSSSPASPFS 93
          TRSIM+ +      G       P      SS+P +P +
Sbjct: 61 TRSIMVTKGNNNVRGLRKLKMDPDSPTCSSSNPGTPLT 83

[Close]
BLAST of CmoCh12G010670 vs. ExPASy Swiss-Prot
Match: Q05349 (Auxin-repressed 12.5 kDa protein OS=Fragaria ananassa OX=3747 PE=2 SV=1)

HSP 1 Score: 44.7 bits (104), Expect = 9.1e-04
Identity = 19/26 (73.08%), Postives = 22/26 (84.62%), Query Frame = 0 

Query: 1  MGLLDQLWDDTVAGPRPDSGLGKLRK 27
          M LLD+LWDD VAGP+P+ GLG LRK
Sbjct: 1  MVLLDKLWDDIVAGPQPERGLGMLRK 26

[Close]
BLAST of CmoCh12G010670 vs. ExPASy TrEMBL
Match: A0A6J1FCM7 (dormancy-associated protein homolog 3 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111444188 PE=3 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 1.3e-61
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0 

Query: 1   MGLLDQLWDDTVAGPRPDSGLGKLRKHSTFTGRNSSGSKELDGGSARSYGEESSQSSVRI 60
           MGLLDQLWDDTVAGPRPDSGLGKLRKHSTFTGRNSSGSKELDGGSARSYGEESSQSSVRI
Sbjct: 1   MGLLDQLWDDTVAGPRPDSGLGKLRKHSTFTGRNSSGSKELDGGSARSYGEESSQSSVRI 60

Query: 61  TRSIMILRPPGYQSGSPPISPAGSSSPASPFSGRESFRFRRRSISDTYTKATDSGPGSPS 120
           TRSIMILRPPGYQSGSPPISPAGSSSPASPFSGRESFRFRRRSISDTYTKATDSGPGSPS
Sbjct: 61  TRSIMILRPPGYQSGSPPISPAGSSSPASPFSGRESFRFRRRSISDTYTKATDSGPGSPS 120

Query: 121 SPHNM 126
           SPHNM
Sbjct: 121 SPHNM 125

[Close]
BLAST of CmoCh12G010670 vs. ExPASy TrEMBL
Match: A0A6J1HLV1 (dormancy-associated protein homolog 3 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111465724 PE=3 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 1.4e-60
Identity = 123/125 (98.40%), Postives = 124/125 (99.20%), Query Frame = 0 

Query: 1   MGLLDQLWDDTVAGPRPDSGLGKLRKHSTFTGRNSSGSKELDGGSARSYGEESSQSSVRI 60
           MGLLDQLWDDTVAGPRPDSGLGKLRKHSTF+GRNSSGSKELDGGSARSYGEESSQSSVRI
Sbjct: 1   MGLLDQLWDDTVAGPRPDSGLGKLRKHSTFSGRNSSGSKELDGGSARSYGEESSQSSVRI 60

Query: 61  TRSIMILRPPGYQSGSPPISPAGSSSPASPFSGRESFRFRRRSISDTYTKATDSGPGSPS 120
           TRSIMILRPPGYQ GSPPISPAGSSSPASPFSGRESFRFRRRSISDTYTKATDSGPGSPS
Sbjct: 61  TRSIMILRPPGYQCGSPPISPAGSSSPASPFSGRESFRFRRRSISDTYTKATDSGPGSPS 120

Query: 121 SPHNM 126
           SPHNM
Sbjct: 121 SPHNM 125

[Close]
BLAST of CmoCh12G010670 vs. ExPASy TrEMBL
Match: A0A1S3BYJ7 (dormancy-associated protein homolog 3 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494595 PE=3 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 2.2e-53
Identity = 110/125 (88.00%), Postives = 118/125 (94.40%), Query Frame = 0 

Query: 1   MGLLDQLWDDTVAGPRPDSGLGKLRKHSTFTGRNSSGSKELDGGSARSYGEESSQSSVRI 60
           MGLL+QLWDDTVAGPRP+SGLGKLRKHST +GR SSGSKELDGGSARSYGE+SS+S VRI
Sbjct: 1   MGLLEQLWDDTVAGPRPESGLGKLRKHSTSSGRPSSGSKELDGGSARSYGEDSSESPVRI 60

Query: 61  TRSIMILRPPGYQSGSPPISPAGSSSPASPFSGRESFRFRRRSISDTYTKATDSGPGSPS 120
           TRSIMI+RPPGYQ+GSPPISPAGSSSPASPFSGRESFRFRRRSIS+ YTK TD G GSPS
Sbjct: 61  TRSIMIVRPPGYQNGSPPISPAGSSSPASPFSGRESFRFRRRSISELYTKTTDGGSGSPS 120

Query: 121 SPHNM 126
           SPHNM
Sbjct: 121 SPHNM 125

[Close]
BLAST of CmoCh12G010670 vs. ExPASy TrEMBL
Match: A0A0A0LFX2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G031190 PE=3 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 1.1e-52
Identity = 107/125 (85.60%), Postives = 118/125 (94.40%), Query Frame = 0 

Query: 1   MGLLDQLWDDTVAGPRPDSGLGKLRKHSTFTGRNSSGSKELDGGSARSYGEESSQSSVRI 60
           MGLLDQLWDDT+AGPRP+SGLGKLRKHSTF+GR +SG+KELDGG ARSYGE+SS+S VRI
Sbjct: 1   MGLLDQLWDDTLAGPRPESGLGKLRKHSTFSGRPTSGNKELDGGRARSYGEDSSESPVRI 60

Query: 61  TRSIMILRPPGYQSGSPPISPAGSSSPASPFSGRESFRFRRRSISDTYTKATDSGPGSPS 120
           TRSIMI+RPPGYQ+GSPPISPAGSSSPASPFSGRESFRFRRRSIS+ YTK T+ G GSPS
Sbjct: 61  TRSIMIVRPPGYQNGSPPISPAGSSSPASPFSGRESFRFRRRSISEVYTKTTNGGSGSPS 120

Query: 121 SPHNM 126
           SPHNM
Sbjct: 121 SPHNM 125

[Close]
BLAST of CmoCh12G010670 vs. ExPASy TrEMBL
Match: A0A6J1D9H4 (dormancy-associated protein homolog 3 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111018856 PE=3 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 3.3e-49
Identity = 104/125 (83.20%), Postives = 114/125 (91.20%), Query Frame = 0 

Query: 1   MGLLDQLWDDTVAGPRPDSGLGKLRKHSTFTGRNSSGSKELDGGSARSYGEESSQSSVRI 60
           MGLLD LWDDTVAGPRP+SGLGKLRKHSTF GR+SSG KELDGG+ARSYG+ESS+S +RI
Sbjct: 1   MGLLDHLWDDTVAGPRPESGLGKLRKHSTFPGRSSSG-KELDGGNARSYGDESSESPMRI 60

Query: 61  TRSIMILRPPGYQSGSPPISPAGSSSPASPFSGRESFRFRRRSISDTYTKATDSGPGSPS 120
           TRSIMI++PPGYQ  SPPISPAGS+SPASPFSGRESFRFRRRS SD Y KAT+ GPGS S
Sbjct: 61  TRSIMIVKPPGYQFSSPPISPAGSNSPASPFSGRESFRFRRRSTSDGYEKATEGGPGSSS 120

Query: 121 SPHNM 126
           SPHNM
Sbjct: 121 SPHNM 124

[Close]
BLAST of CmoCh12G010670 vs. TAIR 10
Match: AT1G56220.1 (Dormancy/auxin associated family protein )

HSP 1 Score: 145.6 bits (366), Expect = 2.7e-35
Identity = 80/137 (58.39%), Postives = 100/137 (72.99%), Query Frame = 0 

Query: 1   MGLLDQLWDDTVAGPRPDSGLGKLRKHSTFTGRNSSGSKELDGGSARSYGEES-SQSSVR 60
           MGLLD LWDDTVAGPRP++GLGKLRKH TF+ R SSG+ + + GSARSYGE+S  + +V+
Sbjct: 1   MGLLDHLWDDTVAGPRPENGLGKLRKHHTFSFRPSSGNDQSEAGSARSYGEDSLPEEAVK 60

Query: 61  ITRSIMILRPPGYQSGSPPISPAGSSSPASPFS--------GRESFRFRRRSISDTYTKA 120
           +TRSIMI++PPGYQ  S P SPAGS+ P SPFS        G+E FRFRRRS SD + KA
Sbjct: 61  VTRSIMIIKPPGYQGSSAPASPAGSTPPLSPFSPPLSPFSGGKEPFRFRRRSTSDAFEKA 120

Query: 121 ---TDSGPGSPSSPHNM 126
              +++GP S    + M
Sbjct: 121 AGGSETGPRSSPPTYGM 137

[Close]
BLAST of CmoCh12G010670 vs. TAIR 10
Match: AT1G56220.3 (Dormancy/auxin associated family protein )

HSP 1 Score: 144.4 bits (363), Expect = 6.0e-35
Identity = 80/140 (57.14%), Postives = 100/140 (71.43%), Query Frame = 0 

Query: 1   MGLLDQLWDDTVAGPRPDSGLGKLRKHSTFTGRNSSGSKELDGGSARSYGEES-SQSSVR 60
           MGLLD LWDDTVAGPRP++GLGKLRKH TF+ R SSG+ + + GSARSYGE+S  + +V+
Sbjct: 1   MGLLDHLWDDTVAGPRPENGLGKLRKHHTFSFRPSSGNDQSEAGSARSYGEDSLPEEAVK 60

Query: 61  ITRSIMILRPPGYQSGSPPISPAGSSSPASPFS-----------GRESFRFRRRSISDTY 120
           +TRSIMI++PPGYQ  S P SPAGS+ P SPFS           G+E FRFRRRS SD +
Sbjct: 61  VTRSIMIIKPPGYQGSSAPASPAGSTPPLSPFSPPLSPFSANAGGKEPFRFRRRSTSDAF 120

Query: 121 TKA---TDSGPGSPSSPHNM 126
            KA   +++GP S    + M
Sbjct: 121 EKAAGGSETGPRSSPPTYGM 140

[Close]
BLAST of CmoCh12G010670 vs. TAIR 10
Match: AT1G56220.2 (Dormancy/auxin associated family protein )

HSP 1 Score: 125.9 bits (315), Expect = 2.2e-29
Identity = 63/93 (67.74%), Postives = 77/93 (82.80%), Query Frame = 0 

Query: 1  MGLLDQLWDDTVAGPRPDSGLGKLRKHSTFTGRNSSGSKELDGGSARSYGEES-SQSSVR 60
          MGLLD LWDDTVAGPRP++GLGKLRKH TF+ R SSG+ + + GSARSYGE+S  + +V+
Sbjct: 1  MGLLDHLWDDTVAGPRPENGLGKLRKHHTFSFRPSSGNDQSEAGSARSYGEDSLPEEAVK 60

Query: 61 ITRSIMILRPPGYQSGSPPISPAGSSSPASPFS 93
          +TRSIMI++PPGYQ  S P SPAGS+ P SPFS
Sbjct: 61 VTRSIMIIKPPGYQGSSAPASPAGSTPPLSPFS 93

[Close]
BLAST of CmoCh12G010670 vs. TAIR 10
Match: AT1G56220.4 (Dormancy/auxin associated family protein )

HSP 1 Score: 125.9 bits (315), Expect = 2.2e-29
Identity = 63/93 (67.74%), Postives = 77/93 (82.80%), Query Frame = 0 

Query: 1  MGLLDQLWDDTVAGPRPDSGLGKLRKHSTFTGRNSSGSKELDGGSARSYGEES-SQSSVR 60
          MGLLD LWDDTVAGPRP++GLGKLRKH TF+ R SSG+ + + GSARSYGE+S  + +V+
Sbjct: 1  MGLLDHLWDDTVAGPRPENGLGKLRKHHTFSFRPSSGNDQSEAGSARSYGEDSLPEEAVK 60

Query: 61 ITRSIMILRPPGYQSGSPPISPAGSSSPASPFS 93
          +TRSIMI++PPGYQ  S P SPAGS+ P SPFS
Sbjct: 61 VTRSIMIIKPPGYQGSSAPASPAGSTPPLSPFS 93

[Close]
BLAST of CmoCh12G010670 vs. TAIR 10
Match: AT1G54070.1 (Dormancy/auxin associated family protein )

HSP 1 Score: 54.7 bits (130), Expect = 6.3e-08
Identity = 37/98 (37.76%), Postives = 49/98 (50.00%), Query Frame = 0 

Query: 1  MGLLDQLWDDTVAGPRPDSGLGKLRKHSTFTGRNSSGSKELDGGSARSYGEESSQSSVRI 60
          MG L +LWD+TVAGP PD+GLGKLRKH + +   SS                 S SS ++
Sbjct: 1  MGFLHKLWDETVAGPTPDNGLGKLRKHDSLSTVRSS---------------PPSLSSDQV 60

Query: 61 TRSIMILRPPGYQSG------SPPISPAGSSSPASPFS 93
          TRSIM+ +      G       P      SS+P +P +
Sbjct: 61 TRSIMVTKGNNNVRGLRKLKMDPDSPTCSSSNPGTPLT 83

The following BLAST results are available for this feature:
BLAST of CmoCh12G010670 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8LD263.8e-3458.39Dormancy-associated protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At1g562... [more]
F4HV658.8e-0737.76Dormancy-associated protein homolog 4 OS=Arabidopsis thaliana OX=3702 GN=At1g540... [more]
Q053499.1e-0473.08Auxin-repressed 12.5 kDa protein OS=Fragaria ananassa OX=3747 PE=2 SV=1[more]
BLAST of CmoCh12G010670 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1FCM71.3e-61100.00dormancy-associated protein homolog 3 isoform X2 OS=Cucurbita moschata OX=3662 G... [more]
A0A6J1HLV11.4e-6098.40dormancy-associated protein homolog 3 isoform X2 OS=Cucurbita maxima OX=3661 GN=... [more]
A0A1S3BYJ72.2e-5388.00dormancy-associated protein homolog 3 isoform X2 OS=Cucumis melo OX=3656 GN=LOC1... [more]
A0A0A0LFX21.1e-5285.60Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G031190 PE=3 SV=1[more]
A0A6J1D9H43.3e-4983.20dormancy-associated protein homolog 3 isoform X2 OS=Momordica charantia OX=3673 ... [more]
BLAST of CmoCh12G010670 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G56220.12.7e-3558.39Dormancy/auxin associated family protein [more]
AT1G56220.36.0e-3557.14Dormancy/auxin associated family protein [more]
AT1G56220.22.2e-2967.74Dormancy/auxin associated family protein [more]
AT1G56220.42.2e-2967.74Dormancy/auxin associated family protein [more]
AT1G54070.16.3e-0837.76Dormancy/auxin associated family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008406Dormancy/auxin associated proteinPFAMPF05564Auxin_repressedcoord: 7..90
e-value: 5.1E-10
score: 40.1
IPR008406Dormancy/auxin associated proteinPANTHERPTHR33565DORMANCY-ASSOCIATED PROTEIN 1coord: 1..123
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..125
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 77..92
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 108..125
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 28..62
NoneNo IPR availablePANTHERPTHR33565:SF1DORMANCY-ASSOCIATED PROTEIN HOMOLOG 3coord: 1..123

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh12G010670.1CmoCh12G010670.1mRNA