CmoCh12G010630 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh12G010630
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionF-box protein PP2-B15-like
LocationCmo_Chr12: 9804892 .. 9806542 (+)
RNA-Seq ExpressionCmoCh12G010630
SyntenyCmoCh12G010630
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTTCCTTAGCTGATATCGAACAACAAAATGGCCGGAATTTTCACCGTCGGAATGTTGCCGGACGACTGTCTTTCCGCCATTCTCTCCCTCACAACTCCCGCCGACGTCGGGAAACTATCCCTCATATCGTCGGCGTTCCGACCAGCGGCGGAATCCGACGTCGTTTGGGGAAGATTTTTGCCTGAAAACTACGCTCGGATTATCGCCGCCTCTGATATCTCCGACGAAGTTCCGTTTGGGTCGAAGAGAGAGATTTTTTTCCGGCTCTGTTCTCCGATCCTCATCGACGGCGGTAAAACGGTAAATAAATGAAACCCATAAACCATTTTGTCGGACTCTGTTCGTCTTATTGGTTGAATAATTCATCTCTGTTTTTACAGAGCTTCGAGTTGGATAAATTTTCCGGGAAAATCTGTTATATACTGTCAGCAAGAGAATTGGGTATCACATGGAGCTCTGATCCACTGTGTTGGAGCTGGAAACCGCACCCAGAATCCAGGTATATACGTAATAGTTCAAACCCACCCTGAGTAGATATTATATTCTTTTGACTTTTAGTTTTTGTTCCCTTTTCAAAGTCCTCATGGGCACTCGTTCCCTTGTCAAATCGACGTGGGACCTCCCAAATCCACCTTCTTTTGGAATCCAATGTCCTTGATGGCACACCGCCTTGTGTCAACCCTCTTCAGGGCTCAGCCTTCTCGATGGCACATCACTTGGTGTCGGGCTCTAATACCATTTCTAACAACACAAGTCTACTACTAGCAGATATGGTCTCAATTTTGACTTCTCCTTTAGGCTTTCCCTTTCGGACTTCCTTTCAATTTTGGCTTCTCCTTCGGGCTTTCCCTTACGACTTTCTCTCAATGTTTTTAAAATGCAAGTGCAATTTCCACACCCTCAAAGGGTATTTTGTGGCCCAACATTCTCTCTTCTCCCCCCAAATCTTCTCGCTGGCACATCGAGTGTCTGGCTCTTATACTATTTGTAATAGCTCAAACTTGATATTGCCCTTTTTAGACTTTTCCTTTCAAGCTTCCCTCAAAGTTTTTAAAACACATCGGGAAGATTTCCATGTCTTCTCCAGAATCGAGGTAGAATCTCTCACACATATATAGACATGTTTCTAAATGCATCCAATTTGTGGTTAGATTTTCAGAAGTGGCAGAGCTAAGAACAGTGAGCTGGCTGGAAATCCATGGAAGAATAAGGAGACAGAGGCTGTCGCCAAACACAGAGTACGGAGCGTACCTTCTAGTGAAGATAACAGAGAGAGCGTATGGGTTGGATTTGATGGCGGCGGAAGTTTCGGTGGCGGTGGGGAATGGAGGGCGGATTTCAGAGGGCAGAGTATGGCTGCAGCGGAAACAGAGGAAGGAGGAAGATTTAGAGAGCTTGTTTTATGGGAATAGAAGGGAAAGAGTGAGGAATCTAATGGGAACAGAGGAAGAAGAAGAAAACAATGGCATAAGGGGTTTGAAGGAGAGAGATGACGGTTGGTTTGAGATTGAATTGGGAGAGTTCATGAGTGGGGAAGATGATGATGATGATGATGAAGAAGATGTTCATATGAGTTTAATGGAGATTAGAGGCTTTCAGCTCAAAGCTGGAATCATTGTTGAAGGGATTCAAATTAGGCCTAAAAATTGA

mRNA sequence

TCTTCCTTAGCTGATATCGAACAACAAAATGGCCGGAATTTTCACCGTCGGAATGTTGCCGGACGACTGTCTTTCCGCCATTCTCTCCCTCACAACTCCCGCCGACGTCGGGAAACTATCCCTCATATCGTCGGCGTTCCGACCAGCGGCGGAATCCGACGTCGTTTGGGGAAGATTTTTGCCTGAAAACTACGCTCGGATTATCGCCGCCTCTGATATCTCCGACGAAGTTCCGTTTGGGTCGAAGAGAGAGATTTTTTTCCGGCTCTGTTCTCCGATCCTCATCGACGGCGGTAAAACGAGCTTCGAGTTGGATAAATTTTCCGGGAAAATCTGTTATATACTGTCAGCAAGAGAATTGGGTATCACATGGAGCTCTGATCCACTGTGTTGGAGCTGGAAACCGCACCCAGAATCCAGGTATATACAAGTGGCAGAGCTAAGAACAGTGAGCTGGCTGGAAATCCATGGAAGAATAAGGAGACAGAGGCTGTCGCCAAACACAGAGTACGGAGCGTACCTTCTAGTGAAGATAACAGAGAGAGCGTATGGGTTGGATTTGATGGCGGCGGAAGTTTCGGTGGCGGTGGGGAATGGAGGGCGGATTTCAGAGGGCAGAGTATGGCTGCAGCGGAAACAGAGGAAGGAGGAAGATTTAGAGAGCTTGTTTTATGGGAATAGAAGGGAAAGAGTGAGGAATCTAATGGGAACAGAGGAAGAAGAAGAAAACAATGGCATAAGGGGTTTGAAGGAGAGAGATGACGGTTGGTTTGAGATTGAATTGGGAGAGTTCATGAGTGGGGAAGATGATGATGATGATGATGAAGAAGATGTTCATATGAGTTTAATGGAGATTAGAGGCTTTCAGCTCAAAGCTGGAATCATTGTTGAAGGGATTCAAATTAGGCCTAAAAATTGA

Coding sequence (CDS)

ATGGCCGGAATTTTCACCGTCGGAATGTTGCCGGACGACTGTCTTTCCGCCATTCTCTCCCTCACAACTCCCGCCGACGTCGGGAAACTATCCCTCATATCGTCGGCGTTCCGACCAGCGGCGGAATCCGACGTCGTTTGGGGAAGATTTTTGCCTGAAAACTACGCTCGGATTATCGCCGCCTCTGATATCTCCGACGAAGTTCCGTTTGGGTCGAAGAGAGAGATTTTTTTCCGGCTCTGTTCTCCGATCCTCATCGACGGCGGTAAAACGAGCTTCGAGTTGGATAAATTTTCCGGGAAAATCTGTTATATACTGTCAGCAAGAGAATTGGGTATCACATGGAGCTCTGATCCACTGTGTTGGAGCTGGAAACCGCACCCAGAATCCAGGTATATACAAGTGGCAGAGCTAAGAACAGTGAGCTGGCTGGAAATCCATGGAAGAATAAGGAGACAGAGGCTGTCGCCAAACACAGAGTACGGAGCGTACCTTCTAGTGAAGATAACAGAGAGAGCGTATGGGTTGGATTTGATGGCGGCGGAAGTTTCGGTGGCGGTGGGGAATGGAGGGCGGATTTCAGAGGGCAGAGTATGGCTGCAGCGGAAACAGAGGAAGGAGGAAGATTTAGAGAGCTTGTTTTATGGGAATAGAAGGGAAAGAGTGAGGAATCTAATGGGAACAGAGGAAGAAGAAGAAAACAATGGCATAAGGGGTTTGAAGGAGAGAGATGACGGTTGGTTTGAGATTGAATTGGGAGAGTTCATGAGTGGGGAAGATGATGATGATGATGATGAAGAAGATGTTCATATGAGTTTAATGGAGATTAGAGGCTTTCAGCTCAAAGCTGGAATCATTGTTGAAGGGATTCAAATTAGGCCTAAAAATTGA

Protein sequence

MAGIFTVGMLPDDCLSAILSLTTPADVGKLSLISSAFRPAAESDVVWGRFLPENYARIIAASDISDEVPFGSKREIFFRLCSPILIDGGKTSFELDKFSGKICYILSARELGITWSSDPLCWSWKPHPESRYIQVAELRTVSWLEIHGRIRRQRLSPNTEYGAYLLVKITERAYGLDLMAAEVSVAVGNGGRISEGRVWLQRKQRKEEDLESLFYGNRRERVRNLMGTEEEEENNGIRGLKERDDGWFEIELGEFMSGEDDDDDDEEDVHMSLMEIRGFQLKAGIIVEGIQIRPKN
Homology
BLAST of CmoCh12G010630 vs. ExPASy Swiss-Prot
Match: O80494 (F-box protein PP2-B15 OS=Arabidopsis thaliana OX=3702 GN=PP2B15 PE=2 SV=2)

HSP 1 Score: 262.7 bits (670), Expect = 5.0e-69
Identity = 138/287 (48.08%), Postives = 190/287 (66.20%), Query Frame = 0

Query: 9   MLPDDCLSAILSLTTPADVGKLSLISSAFRPAAESDVVWGRFLPENYARIIAASDISDEV 68
           MLP+ C++ ILS TTPAD    + +SS FR A +SD VW +FLP +Y  +I+ S     +
Sbjct: 2   MLPEACVATILSFTTPADTISSAAVSSVFRVAGDSDFVWEKFLPTDYCHVISRSTDPHRI 61

Query: 69  PFGSKREIFFRLCSPILIDGGKTSFELDKFSGKICYILSARELGITWSSDPLCWSWKPHP 128
            F SK+E++  LC  ILID G+  F+++K SGKI YILS+R+L ITWS     WSW P  
Sbjct: 62  -FSSKKELYRCLCESILIDNGRKIFKIEKLSGKISYILSSRDLSITWSDQRHYWSWSPRS 121

Query: 129 ESRYIQVAELRTVSWLEIHGRIRRQRLSPNTEYGAYLLVKITERAYGLDLMAAEVSVAVG 188
           +SR+ +  +L    WLEI G+I+   LSPNT YGAYL++K+T RAYGLDL+ AE S+ VG
Sbjct: 122 DSRFSEGVQLIMTDWLEIIGKIQTGALSPNTNYGAYLIMKVTSRAYGLDLVPAETSIKVG 181

Query: 189 NGGRISEGRVWLQRKQRKEEDLESLFYGNRRERVRNLMGTEEEEENNGIRGLKERDDGWF 248
           NG +  +   +L     K++ +E +FYG R +R    M T E   ++  R  + RDDGW 
Sbjct: 182 NGEKKIKS-TYLSCLDNKKQQMERVFYGQREQR----MATHEVVRSHR-REPEVRDDGWM 241

Query: 249 EIELGEFMSGEDDDDDDEEDVHMSLMEIRGFQLKAGIIVEGIQIRPK 296
           EIELGEF +G  + DDD+E V MSL E++G+QLK GI ++GI++RPK
Sbjct: 242 EIELGEFETGSGEGDDDKE-VVMSLTEVKGYQLKGGIAIDGIEVRPK 280

BLAST of CmoCh12G010630 vs. ExPASy Swiss-Prot
Match: Q9C7J9 (F-box protein PP2-B13 OS=Arabidopsis thaliana OX=3702 GN=PP2B13 PE=2 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 5.4e-63
Identity = 133/286 (46.50%), Postives = 188/286 (65.73%), Query Frame = 0

Query: 9   MLPDDCLSAILSLTTPADVGKLSLISSAFRPAAESDVVWGRFLPENYARIIAASDISDEV 68
           MLP+ C++ IL+ T+PAD    S +SS FR A +SD VW +FLP +Y  +I+ S     +
Sbjct: 3   MLPEACVANILAFTSPADAFSSSEVSSVFRLAGDSDFVWEKFLPSHYKSLISQSTDHHRI 62

Query: 69  PFGSKREIFFRLCSPILIDGGKTSFELDKFSGKICYILSARELGITWSSDPLCWSWKPHP 128
            F SK+EI+  LC  +LID  +  F+++KFSGKI YILSAR++ IT+S      SW    
Sbjct: 63  -FSSKKEIYRCLCDSLLIDNARKLFKINKFSGKISYILSARDISITYSDHASYCSWSNVS 122

Query: 129 ESRYIQVAELRTVSWLEIHGRIRRQRLSPNTEYGAYLLVKITERAYGLDLMAAEVSVAVG 188
           +SR+ + AEL T   LEI G+I+   LSPNT+YGAYL++K+T  AYGLDL+ AE SV   
Sbjct: 123 DSRFSESAELITTDRLEIKGKIQTTVLSPNTKYGAYLIMKVTNGAYGLDLVPAETSVKSK 182

Query: 189 NGGRISEGRVWLQRKQRKEEDLESLFYGNRRERVRNLMGTEEEEENNGIRGLKERDDGWF 248
           N G+ ++   +L     K++ ++ LFYGNR ER+   M  E    +   R  K RDDGW 
Sbjct: 183 N-GQNNKNTTYLCCLDEKKQQMKRLFYGNREERM--AMTVEAVGGDGKRREPKARDDGWL 242

Query: 249 EIELGEFMSGEDDDDDDEEDVHMSLMEIRGFQLKAGIIVEGIQIRP 295
           EIELGEF++ E +DD    +V+MSL E++G+QLK GI+++GI++RP
Sbjct: 243 EIELGEFVTREGEDD----EVNMSLTEVKGYQLKGGIVIDGIEVRP 280

BLAST of CmoCh12G010630 vs. ExPASy Swiss-Prot
Match: Q9C7K0 (F-box protein VBF OS=Arabidopsis thaliana OX=3702 GN=VBF PE=1 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 1.6e-62
Identity = 132/287 (45.99%), Postives = 186/287 (64.81%), Query Frame = 0

Query: 9   MLPDDCLSAILSLTTPADVGKLSLISSAFRPAAESDVVWGRFLPENYARIIAASDISDEV 68
           MLP+ C++ IL+ T+PAD    S +SS FR A +SD VW +FLP +Y  +I+ S      
Sbjct: 3   MLPEACIANILAFTSPADAFSSSEVSSVFRLAGDSDFVWEKFLPSDYKSLISQS-TDHHW 62

Query: 69  PFGSKREIFFRLCSPILIDGGKTSFELDKFSGKICYILSARELGITWSSDPLCWSWKPHP 128
              SK+EI+  LC  +LID  +  F+++KFSGKI Y+LSAR++ IT S     WSW    
Sbjct: 63  NISSKKEIYRCLCDSLLIDNARKLFKINKFSGKISYVLSARDISITHSDHASYWSWSNVS 122

Query: 129 ESRYIQVAELRTVSWLEIHGRIRRQRLSPNTEYGAYLLVKITERAYGLDLMAAEVSVAVG 188
           +SR+ + AEL     LEI G+I+ + LS NT YGAYL+VK+T+ AYGLDL+ AE S+   
Sbjct: 123 DSRFSESAELIITDRLEIEGKIQTRVLSANTRYGAYLIVKVTKGAYGLDLVPAETSIKSK 182

Query: 189 NGGRISEGRVWLQRKQRKEEDLESLFYGNRRERVRNLMGTEEEEENNGIRGLKERDDGWF 248
           N G+IS+   +L     K++ ++ LFYGNR ER+   M  E    +   R  K RDDGW 
Sbjct: 183 N-GQISKSATYLCCLDEKKQQMKRLFYGNREERM--AMTVEAVGGDGKRREPKCRDDGWM 242

Query: 249 EIELGEFMSGEDDDDDDEEDVHMSLMEIRGFQLKAGIIVEGIQIRPK 296
           EIELGEF + E +DD    +V+M+L E++G+QLK GI+++GI++RPK
Sbjct: 243 EIELGEFETREGEDD----EVNMTLTEVKGYQLKGGILIDGIEVRPK 281

BLAST of CmoCh12G010630 vs. ExPASy Swiss-Prot
Match: Q3E6P4 (F-box protein At2g02240 OS=Arabidopsis thaliana OX=3702 GN=At2g02240 PE=2 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 9.2e-47
Identity = 110/287 (38.33%), Postives = 157/287 (54.70%), Query Frame = 0

Query: 9   MLPDDCLSAILSLTTPADVGKLSLISSAFRPAAESDVVWGRFLPENYARIIAASDISDEV 68
           +LP+DC+S I+S T+P D    + +S  F  A  SD VW +FLP  Y  +++ S +    
Sbjct: 63  VLPEDCISNIISFTSPRDACVAASVSKTFESAVSSDCVWDKFLPPEYESLVSRSRV---- 122

Query: 69  PFGSKREIFFRLC-SPILIDGGKTSFELDKFSGKICYILSARELGITWSSDPLCWSWKPH 128
            F SK+E++F LC +P+LI+ GK SF L+K SGK C +LS++EL ITW S P  W W   
Sbjct: 123 -FASKKELYFALCHNPVLIEDGKKSFWLEKASGKRCIMLSSKELWITWGSSPEYWQWISI 182

Query: 129 PESRYIQVAELRTVSWLEIHGRIRRQRLSPNTEYGAYLLVKITERAYGLDLMAAEVSVAV 188
           PESR+ ++AEL  V W EI G+   + LSP T Y AY++ K  +R  GL  +  E  V +
Sbjct: 183 PESRFNKIAELLDVCWFEIRGKTSARVLSPGTRYSAYIVFKTKDRCPGLGHLPVE--VGL 242

Query: 189 GNGGRISEGRVWLQRKQRKEEDLESLFYGNRRERVRNLMGTEEEEENNGIRGLKERDDGW 248
           G  G+ S  R                F G R  R R         E   +    +R+DGW
Sbjct: 243 GLVGQESSKRF-------------IYFIGPRDRRGR--------RETRDVTKPDQREDGW 302

Query: 249 FEIELGEFMSGEDDDDDDEEDVHMSLMEIRGFQLKAGIIVEGIQIRP 295
            E ELGEF + E  D     ++  S++EI+    K+G+I++GI+ RP
Sbjct: 303 MEAELGEFFNEERCD-----EIEFSVIEIKSPSWKSGLIIQGIEFRP 316

BLAST of CmoCh12G010630 vs. ExPASy Swiss-Prot
Match: Q9ZVQ6 (F-box protein PP2-B10 OS=Arabidopsis thaliana OX=3702 GN=PP2B10 PE=1 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 4.6e-46
Identity = 106/285 (37.19%), Postives = 150/285 (52.63%), Query Frame = 0

Query: 11  PDDCLSAILSLTTPADVGKLSLISSAFRPAAESDVVWGRFLPENYARIIAASDISDEVPF 70
           P+DC+S I+S T P D    + +S  F    +SD++W +FLP +Y  +I  S +     F
Sbjct: 18  PEDCISYIISFTNPRDACVAATVSKTFESTVKSDIIWEKFLPADYESLIPPSRV-----F 77

Query: 71  GSKREIFFRLCS-PILIDGGKTSFELDKFSGKICYILSARELGITWSSDPLCWSWKPHPE 130
            SK+E++F LC+ P+L D  K S  L+K SGK C +LSA  L I W  +P  W W P PE
Sbjct: 78  SSKKELYFSLCNDPVLFDDDKKSVWLEKASGKRCLMLSAMNLSIIWGDNPQYWQWIPIPE 137

Query: 131 SRYIQVAELRTVSWLEIHGRIRRQRLSPNTEYGAYLLVKITERAYGLDLMAAEVSVAVGN 190
           SR+ +VA+LR V W EI GR   + LSP T Y AY++ K  ++ YG   +A E +V V  
Sbjct: 138 SRFEKVAKLRDVCWFEIRGRTNTRVLSPRTRYSAYIVFKGVDKCYGFQNVAIEAAVGVVG 197

Query: 191 GGRISEGRVWLQRKQRKEEDLESLFYGNRRERVRNLMGTEEEEENNGIRGLKERDDGWFE 250
                      Q   R+           RR  V+                 K+R+DGW E
Sbjct: 198 -----------QEPSRRLICFSEAIRRGRRNVVKP----------------KQREDGWME 257

Query: 251 IELGEFMSGEDDDDDDEEDVHMSLMEIRGFQLKAGIIVEGIQIRP 295
           IELGEF +  D    D +++ MS +E +    K G+I++GI+IRP
Sbjct: 258 IELGEFFN--DGGIMDNDEIEMSALETKQLNRKCGLIIQGIEIRP 268

BLAST of CmoCh12G010630 vs. ExPASy TrEMBL
Match: A0A6J1FGV3 (F-box protein PP2-B15-like OS=Cucurbita moschata OX=3662 GN=LOC111444065 PE=4 SV=1)

HSP 1 Score: 590.1 bits (1520), Expect = 5.1e-165
Identity = 293/296 (98.99%), Postives = 295/296 (99.66%), Query Frame = 0

Query: 1   MAGIFTVGMLPDDCLSAILSLTTPADVGKLSLISSAFRPAAESDVVWGRFLPENYARIIA 60
           MAGIFTVGMLPDDCLSAILSLTTPADVGKLSLISSAFRPAAESDVVWGRFLPENYARIIA
Sbjct: 1   MAGIFTVGMLPDDCLSAILSLTTPADVGKLSLISSAFRPAAESDVVWGRFLPENYARIIA 60

Query: 61  ASDISDEVPFGSKREIFFRLCSPILIDGGKTSFELDKFSGKICYILSARELGITWSSDPL 120
           ASDISDEVPFGSKREIFFRLCSPILIDGGKTSFELDKFSGKICYILSARELGITWSSDPL
Sbjct: 61  ASDISDEVPFGSKREIFFRLCSPILIDGGKTSFELDKFSGKICYILSARELGITWSSDPL 120

Query: 121 CWSWKPHPESRYIQVAELRTVSWLEIHGRIRRQRLSPNTEYGAYLLVKITERAYGLDLMA 180
           CWSWKPHPESR+ +VAELRTVSWLEIHGRIRRQRLSPNTEYGAYLLVKITERAYGLDLMA
Sbjct: 121 CWSWKPHPESRFSEVAELRTVSWLEIHGRIRRQRLSPNTEYGAYLLVKITERAYGLDLMA 180

Query: 181 AEVSVAVGNGGRISEGRVWLQRKQRKEEDLESLFYGNRRERVRNLMGTEEEEENNGIRGL 240
           AEVSVAVGNGGRISEGRVWLQRKQRKEEDLESLFYGNRRERVRNLMGTEEEEENNGIRGL
Sbjct: 181 AEVSVAVGNGGRISEGRVWLQRKQRKEEDLESLFYGNRRERVRNLMGTEEEEENNGIRGL 240

Query: 241 KERDDGWFEIELGEFMSGEDDDDDDEEDVHMSLMEIRGFQLKAGIIVEGIQIRPKN 297
           KERDDGWFEIELGEFMSGEDDDDDDEEDVHMSLMEIRGFQLKAGIIVEGIQIRPKN
Sbjct: 241 KERDDGWFEIELGEFMSGEDDDDDDEEDVHMSLMEIRGFQLKAGIIVEGIQIRPKN 296

BLAST of CmoCh12G010630 vs. ExPASy TrEMBL
Match: A0A6J1HPX5 (F-box protein PP2-B15-like OS=Cucurbita maxima OX=3661 GN=LOC111465617 PE=4 SV=1)

HSP 1 Score: 537.3 bits (1383), Expect = 3.9e-149
Identity = 270/295 (91.53%), Postives = 279/295 (94.58%), Query Frame = 0

Query: 1   MAGIFTVGMLPDDCLSAILSLTTPADVGKLSLISSAFRPAAESDVVWGRFLPENYARIIA 60
           MAGIFTVGMLPDDCLSAILSLTTPADV KLSLISS FR  AESDVVWGRFLPENYA+IIA
Sbjct: 1   MAGIFTVGMLPDDCLSAILSLTTPADVVKLSLISSEFRSVAESDVVWGRFLPENYAQIIA 60

Query: 61  ASDISDEVPFGSKREIFFRLCSPILIDGGKTSFELDKFSGKICYILSARELGITWSSDPL 120
           ASDISDEVPF SKREIFFRLCSPILID GKTSFELDKFSGKICY+LSARELGITWSSDPL
Sbjct: 61  ASDISDEVPFRSKREIFFRLCSPILIDSGKTSFELDKFSGKICYLLSARELGITWSSDPL 120

Query: 121 CWSWKPHPESRYIQVAELRTVSWLEIHGRIRRQRLSPNTEYGAYLLVKITERAYGLDLMA 180
           CWSWK HP+SR+ +VAELRTVSWLEIHGRI RQ+LSPNTEYGAYL+VKITERAYGLDLMA
Sbjct: 121 CWSWKRHPQSRFSEVAELRTVSWLEIHGRIGRQKLSPNTEYGAYLIVKITERAYGLDLMA 180

Query: 181 AEVSVAVGNGGRISEGRVWLQRKQRKEEDLESLFYGNRRERVRNLMGTEEEEENNGIRGL 240
           AEVSVAVGNGGRI+EGRVWLQRKQRKEEDLESLFYGNRRERVRNLMGTEEEEE+NGIR L
Sbjct: 181 AEVSVAVGNGGRITEGRVWLQRKQRKEEDLESLFYGNRRERVRNLMGTEEEEESNGIRSL 240

Query: 241 KERDDGWFEIELGEFMSGEDDDDDDEEDVHMSLMEIRGFQLKAGIIVEGIQIRPK 296
           KERDDGWFEIELG FMSGEDD     EDVHMSLMEIRGFQLKAGIIVEGIQIRPK
Sbjct: 241 KERDDGWFEIELGVFMSGEDD-----EDVHMSLMEIRGFQLKAGIIVEGIQIRPK 290

BLAST of CmoCh12G010630 vs. ExPASy TrEMBL
Match: A0A6J1DQK9 (F-box protein VBF-like OS=Momordica charantia OX=3673 GN=LOC111023316 PE=4 SV=1)

HSP 1 Score: 426.0 bits (1094), Expect = 1.3e-115
Identity = 212/299 (70.90%), Postives = 252/299 (84.28%), Query Frame = 0

Query: 1   MAGIFTVGMLPDDCLSAILSLTTPADVGKLSLISSAFRPAAESDVVWGRFLPENYARIIA 60
           MAGI ++GMLP+DC+S ILSLTTP+DVG+LS++SSAFR AAESDVVWGRFLP NYA I+A
Sbjct: 1   MAGILSIGMLPEDCVSTILSLTTPSDVGRLSVVSSAFRSAAESDVVWGRFLPNNYAHILA 60

Query: 61  ASDISDEVPFGSKREIFFRLCSPILIDGGKTSFELDKFSGKICYILSARELGITWSSDPL 120
           A+DIS E PF SKREIFFRLCSP+L+DGGK S EL+K S KICY LSAREL I+WSSDPL
Sbjct: 61  AADISGESPFCSKREIFFRLCSPLLLDGGKKSLELEKISAKICYTLSARELSISWSSDPL 120

Query: 121 CWSWKPHPESRYIQVAELRTVSWLEIHGRIRRQRLSPNTEYGAYLLVKITERAYGLDLMA 180
           CWSWK H  SR+ +VAELRTVSWLEI G+IR + +S NT YGAYLLVKI++RAYGLDL+ 
Sbjct: 121 CWSWKNHSHSRFAEVAELRTVSWLEISGKIRTKTVSSNTLYGAYLLVKISDRAYGLDLVP 180

Query: 181 AEVSVAVGNG--GRISEGRVWLQRKQRKEEDLESLFYGNRRERVRNLMGT-EEEEENNGI 240
           A+V V VG+G   ++SEG VWLQRK +K+ED+E LFYGNRRERVR L+G  E+ EEN  I
Sbjct: 181 AQVCVQVGDGAQAQVSEGSVWLQRKDKKKEDIECLFYGNRRERVRKLVGNGEKMEENGSI 240

Query: 241 RGLKERDDGWFEIELGEFMSGEDDDDDDEEDVHMSLMEIRGFQLKAGIIVEGIQIRPKN 297
           R LKER+DGW EIELGEF SGE+  D   E+V MSLMEI+GFQLKAG++++GIQIRPK+
Sbjct: 241 RVLKEREDGWLEIELGEFFSGENGTD---EEVKMSLMEIKGFQLKAGLVLQGIQIRPKH 296

BLAST of CmoCh12G010630 vs. ExPASy TrEMBL
Match: A0A6J1DS06 (F-box protein VBF-like OS=Momordica charantia OX=3673 GN=LOC111023312 PE=4 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 8.0e-110
Identity = 206/299 (68.90%), Postives = 249/299 (83.28%), Query Frame = 0

Query: 1   MAGIFTVGMLPDDCLSAILSLTTPADVGKLSLISSAFRPAAESDVVWGRFLPENYARIIA 60
           MAGIF++GMLP+DC+S ILSLTTP+D G+LS++S+AFR AAESDVVWGRFLP+NYA I+A
Sbjct: 1   MAGIFSIGMLPEDCVSEILSLTTPSDAGRLSVVSAAFRSAAESDVVWGRFLPDNYAHILA 60

Query: 61  ASDISDEVPFGSKREIFFRLCSPILIDGGKTSFELDKFSGKICYILSARELGITWSSDPL 120
           A+DIS E PF SKREIFF  CSP+L+DGGK SF+L+KFSGKI YILSAREL IT SSDP 
Sbjct: 61  AADISGESPFCSKREIFFLFCSPLLLDGGKKSFQLEKFSGKISYILSARELSITGSSDPX 120

Query: 121 CWSWKPHPESRYIQVAELRTVSWLEIHGRIRRQRLSPNTEYGAYLLVKITERAYGLDLMA 180
           CWSW  H +SR+ +VAELRTVS LEI+G+I  + LS NT YGAYLLVKI++ AYGLDL+ 
Sbjct: 121 CWSWNNHSQSRFAEVAELRTVSRLEINGKIGTKTLSSNTLYGAYLLVKISDWAYGLDLVP 180

Query: 181 AEVSVAVGNG--GRISEGRVWLQRKQRKEEDLESLFYGNRRERVRNLM-GTEEEEENNGI 240
           A+V V VG+G   ++SEG VWLQRK +K+ED+E LFYGNRRERVR L+   E+ EEN  I
Sbjct: 181 AQVCVQVGDGAQAQVSEGSVWLQRKDKKKEDMECLFYGNRRERVRKLVENGEKMEENGSI 240

Query: 241 RGLKERDDGWFEIELGEFMSGEDDDDDDEEDVHMSLMEIRGFQLKAGIIVEGIQIRPKN 297
           R LKER+DGW EIELGEF SGE+  D   E+V MSLMEI+GFQLKAG++++GIQIRPK+
Sbjct: 241 RVLKEREDGWLEIELGEFFSGENGTD---EEVKMSLMEIKGFQLKAGLVLQGIQIRPKH 296

BLAST of CmoCh12G010630 vs. ExPASy TrEMBL
Match: A0A6J1KF36 (F-box protein PP2-B15-like OS=Cucurbita maxima OX=3661 GN=LOC111493739 PE=4 SV=1)

HSP 1 Score: 404.1 bits (1037), Expect = 5.2e-109
Identity = 198/298 (66.44%), Postives = 241/298 (80.87%), Query Frame = 0

Query: 1   MAGIFTVGMLPDDCLSAILSLTTPADVGKLSLISSAFRPAAESDVVWGRFLPENYARIIA 60
           MAGI ++G+LP+DC+SAILSLTTP D GKLSL+SS FR AAESDVVW RFLP NYA I+A
Sbjct: 1   MAGISSIGVLPEDCISAILSLTTPTDAGKLSLVSSTFRSAAESDVVWSRFLPRNYAEIMA 60

Query: 61  ASDISDEVPFGSKREIFFRLCSPILIDGGKTSFELDKFSGKICYILSARELGITWSSDPL 120
            SDI+ E+P  SKRE FFRLCSPILIDGGK SFEL++FSGKICY LSAREL ITWSSDPL
Sbjct: 61  VSDIAGELPLCSKREAFFRLCSPILIDGGKKSFELERFSGKICYTLSARELAITWSSDPL 120

Query: 121 CWSWKPHPESRYIQVAELRTVSWLEIHGRIRRQRLSPNTEYGAYLLVKITERAYGLDLMA 180
           CWSWK  P+SR+ +VAELR  SW+EIHGR R  RLSPNT YGAYL+VKI+E+ YGLDLM 
Sbjct: 121 CWSWKSDPQSRFAEVAELRASSWVEIHGRTRTGRLSPNTLYGAYLVVKISEKGYGLDLMP 180

Query: 181 AEVSVAVGNGGRISEGRVWLQRKQRKEEDLESLFYGNRRERVRNLMGTE--EEEENNGIR 240
           A+V V +G+  + S+G VWL+RK++    +ESLFYGNRRER   L+ ++  E+ ++NGIR
Sbjct: 181 AQVCVQLGDALQSSQGSVWLRRKEQSNLKMESLFYGNRRERAIKLLASDLGEDFDSNGIR 240

Query: 241 GLKERDDGWFEIELGEFMSGEDDDDDDEEDVHMSLMEIRGFQLKAGIIVEGIQIRPKN 297
            L+ERDDGW EIELGEF +GEDD     E + MS +E +GFQLK+G++V+ IQIRPK+
Sbjct: 241 DLRERDDGWSEIELGEFFTGEDD-----EHLTMSFLETKGFQLKSGLVVQAIQIRPKH 293

BLAST of CmoCh12G010630 vs. TAIR 10
Match: AT1G09155.1 (phloem protein 2-B15 )

HSP 1 Score: 262.7 bits (670), Expect = 3.6e-70
Identity = 138/287 (48.08%), Postives = 190/287 (66.20%), Query Frame = 0

Query: 9   MLPDDCLSAILSLTTPADVGKLSLISSAFRPAAESDVVWGRFLPENYARIIAASDISDEV 68
           MLP+ C++ ILS TTPAD    + +SS FR A +SD VW +FLP +Y  +I+ S     +
Sbjct: 2   MLPEACVATILSFTTPADTISSAAVSSVFRVAGDSDFVWEKFLPTDYCHVISRSTDPHRI 61

Query: 69  PFGSKREIFFRLCSPILIDGGKTSFELDKFSGKICYILSARELGITWSSDPLCWSWKPHP 128
            F SK+E++  LC  ILID G+  F+++K SGKI YILS+R+L ITWS     WSW P  
Sbjct: 62  -FSSKKELYRCLCESILIDNGRKIFKIEKLSGKISYILSSRDLSITWSDQRHYWSWSPRS 121

Query: 129 ESRYIQVAELRTVSWLEIHGRIRRQRLSPNTEYGAYLLVKITERAYGLDLMAAEVSVAVG 188
           +SR+ +  +L    WLEI G+I+   LSPNT YGAYL++K+T RAYGLDL+ AE S+ VG
Sbjct: 122 DSRFSEGVQLIMTDWLEIIGKIQTGALSPNTNYGAYLIMKVTSRAYGLDLVPAETSIKVG 181

Query: 189 NGGRISEGRVWLQRKQRKEEDLESLFYGNRRERVRNLMGTEEEEENNGIRGLKERDDGWF 248
           NG +  +   +L     K++ +E +FYG R +R    M T E   ++  R  + RDDGW 
Sbjct: 182 NGEKKIKS-TYLSCLDNKKQQMERVFYGQREQR----MATHEVVRSHR-REPEVRDDGWM 241

Query: 249 EIELGEFMSGEDDDDDDEEDVHMSLMEIRGFQLKAGIIVEGIQIRPK 296
           EIELGEF +G  + DDD+E V MSL E++G+QLK GI ++GI++RPK
Sbjct: 242 EIELGEFETGSGEGDDDKE-VVMSLTEVKGYQLKGGIAIDGIEVRPK 280

BLAST of CmoCh12G010630 vs. TAIR 10
Match: AT1G56240.1 (phloem protein 2-B13 )

HSP 1 Score: 242.7 bits (618), Expect = 3.8e-64
Identity = 133/286 (46.50%), Postives = 188/286 (65.73%), Query Frame = 0

Query: 9   MLPDDCLSAILSLTTPADVGKLSLISSAFRPAAESDVVWGRFLPENYARIIAASDISDEV 68
           MLP+ C++ IL+ T+PAD    S +SS FR A +SD VW +FLP +Y  +I+ S     +
Sbjct: 3   MLPEACVANILAFTSPADAFSSSEVSSVFRLAGDSDFVWEKFLPSHYKSLISQSTDHHRI 62

Query: 69  PFGSKREIFFRLCSPILIDGGKTSFELDKFSGKICYILSARELGITWSSDPLCWSWKPHP 128
            F SK+EI+  LC  +LID  +  F+++KFSGKI YILSAR++ IT+S      SW    
Sbjct: 63  -FSSKKEIYRCLCDSLLIDNARKLFKINKFSGKISYILSARDISITYSDHASYCSWSNVS 122

Query: 129 ESRYIQVAELRTVSWLEIHGRIRRQRLSPNTEYGAYLLVKITERAYGLDLMAAEVSVAVG 188
           +SR+ + AEL T   LEI G+I+   LSPNT+YGAYL++K+T  AYGLDL+ AE SV   
Sbjct: 123 DSRFSESAELITTDRLEIKGKIQTTVLSPNTKYGAYLIMKVTNGAYGLDLVPAETSVKSK 182

Query: 189 NGGRISEGRVWLQRKQRKEEDLESLFYGNRRERVRNLMGTEEEEENNGIRGLKERDDGWF 248
           N G+ ++   +L     K++ ++ LFYGNR ER+   M  E    +   R  K RDDGW 
Sbjct: 183 N-GQNNKNTTYLCCLDEKKQQMKRLFYGNREERM--AMTVEAVGGDGKRREPKARDDGWL 242

Query: 249 EIELGEFMSGEDDDDDDEEDVHMSLMEIRGFQLKAGIIVEGIQIRP 295
           EIELGEF++ E +DD    +V+MSL E++G+QLK GI+++GI++RP
Sbjct: 243 EIELGEFVTREGEDD----EVNMSLTEVKGYQLKGGIVIDGIEVRP 280

BLAST of CmoCh12G010630 vs. TAIR 10
Match: AT1G56250.1 (phloem protein 2-B14 )

HSP 1 Score: 241.1 bits (614), Expect = 1.1e-63
Identity = 132/287 (45.99%), Postives = 186/287 (64.81%), Query Frame = 0

Query: 9   MLPDDCLSAILSLTTPADVGKLSLISSAFRPAAESDVVWGRFLPENYARIIAASDISDEV 68
           MLP+ C++ IL+ T+PAD    S +SS FR A +SD VW +FLP +Y  +I+ S      
Sbjct: 3   MLPEACIANILAFTSPADAFSSSEVSSVFRLAGDSDFVWEKFLPSDYKSLISQS-TDHHW 62

Query: 69  PFGSKREIFFRLCSPILIDGGKTSFELDKFSGKICYILSARELGITWSSDPLCWSWKPHP 128
              SK+EI+  LC  +LID  +  F+++KFSGKI Y+LSAR++ IT S     WSW    
Sbjct: 63  NISSKKEIYRCLCDSLLIDNARKLFKINKFSGKISYVLSARDISITHSDHASYWSWSNVS 122

Query: 129 ESRYIQVAELRTVSWLEIHGRIRRQRLSPNTEYGAYLLVKITERAYGLDLMAAEVSVAVG 188
           +SR+ + AEL     LEI G+I+ + LS NT YGAYL+VK+T+ AYGLDL+ AE S+   
Sbjct: 123 DSRFSESAELIITDRLEIEGKIQTRVLSANTRYGAYLIVKVTKGAYGLDLVPAETSIKSK 182

Query: 189 NGGRISEGRVWLQRKQRKEEDLESLFYGNRRERVRNLMGTEEEEENNGIRGLKERDDGWF 248
           N G+IS+   +L     K++ ++ LFYGNR ER+   M  E    +   R  K RDDGW 
Sbjct: 183 N-GQISKSATYLCCLDEKKQQMKRLFYGNREERM--AMTVEAVGGDGKRREPKCRDDGWM 242

Query: 249 EIELGEFMSGEDDDDDDEEDVHMSLMEIRGFQLKAGIIVEGIQIRPK 296
           EIELGEF + E +DD    +V+M+L E++G+QLK GI+++GI++RPK
Sbjct: 243 EIELGEFETREGEDD----EVNMTLTEVKGYQLKGGILIDGIEVRPK 281

BLAST of CmoCh12G010630 vs. TAIR 10
Match: AT2G02240.1 (F-box family protein )

HSP 1 Score: 188.7 bits (478), Expect = 6.6e-48
Identity = 110/287 (38.33%), Postives = 157/287 (54.70%), Query Frame = 0

Query: 9   MLPDDCLSAILSLTTPADVGKLSLISSAFRPAAESDVVWGRFLPENYARIIAASDISDEV 68
           +LP+DC+S I+S T+P D    + +S  F  A  SD VW +FLP  Y  +++ S +    
Sbjct: 63  VLPEDCISNIISFTSPRDACVAASVSKTFESAVSSDCVWDKFLPPEYESLVSRSRV---- 122

Query: 69  PFGSKREIFFRLC-SPILIDGGKTSFELDKFSGKICYILSARELGITWSSDPLCWSWKPH 128
            F SK+E++F LC +P+LI+ GK SF L+K SGK C +LS++EL ITW S P  W W   
Sbjct: 123 -FASKKELYFALCHNPVLIEDGKKSFWLEKASGKRCIMLSSKELWITWGSSPEYWQWISI 182

Query: 129 PESRYIQVAELRTVSWLEIHGRIRRQRLSPNTEYGAYLLVKITERAYGLDLMAAEVSVAV 188
           PESR+ ++AEL  V W EI G+   + LSP T Y AY++ K  +R  GL  +  E  V +
Sbjct: 183 PESRFNKIAELLDVCWFEIRGKTSARVLSPGTRYSAYIVFKTKDRCPGLGHLPVE--VGL 242

Query: 189 GNGGRISEGRVWLQRKQRKEEDLESLFYGNRRERVRNLMGTEEEEENNGIRGLKERDDGW 248
           G  G+ S  R                F G R  R R         E   +    +R+DGW
Sbjct: 243 GLVGQESSKRF-------------IYFIGPRDRRGR--------RETRDVTKPDQREDGW 302

Query: 249 FEIELGEFMSGEDDDDDDEEDVHMSLMEIRGFQLKAGIIVEGIQIRP 295
            E ELGEF + E  D     ++  S++EI+    K+G+I++GI+ RP
Sbjct: 303 MEAELGEFFNEERCD-----EIEFSVIEIKSPSWKSGLIIQGIEFRP 316

BLAST of CmoCh12G010630 vs. TAIR 10
Match: AT2G02360.1 (phloem protein 2-B10 )

HSP 1 Score: 186.4 bits (472), Expect = 3.3e-47
Identity = 106/285 (37.19%), Postives = 150/285 (52.63%), Query Frame = 0

Query: 11  PDDCLSAILSLTTPADVGKLSLISSAFRPAAESDVVWGRFLPENYARIIAASDISDEVPF 70
           P+DC+S I+S T P D    + +S  F    +SD++W +FLP +Y  +I  S +     F
Sbjct: 18  PEDCISYIISFTNPRDACVAATVSKTFESTVKSDIIWEKFLPADYESLIPPSRV-----F 77

Query: 71  GSKREIFFRLCS-PILIDGGKTSFELDKFSGKICYILSARELGITWSSDPLCWSWKPHPE 130
            SK+E++F LC+ P+L D  K S  L+K SGK C +LSA  L I W  +P  W W P PE
Sbjct: 78  SSKKELYFSLCNDPVLFDDDKKSVWLEKASGKRCLMLSAMNLSIIWGDNPQYWQWIPIPE 137

Query: 131 SRYIQVAELRTVSWLEIHGRIRRQRLSPNTEYGAYLLVKITERAYGLDLMAAEVSVAVGN 190
           SR+ +VA+LR V W EI GR   + LSP T Y AY++ K  ++ YG   +A E +V V  
Sbjct: 138 SRFEKVAKLRDVCWFEIRGRTNTRVLSPRTRYSAYIVFKGVDKCYGFQNVAIEAAVGVVG 197

Query: 191 GGRISEGRVWLQRKQRKEEDLESLFYGNRRERVRNLMGTEEEEENNGIRGLKERDDGWFE 250
                      Q   R+           RR  V+                 K+R+DGW E
Sbjct: 198 -----------QEPSRRLICFSEAIRRGRRNVVKP----------------KQREDGWME 257

Query: 251 IELGEFMSGEDDDDDDEEDVHMSLMEIRGFQLKAGIIVEGIQIRP 295
           IELGEF +  D    D +++ MS +E +    K G+I++GI+IRP
Sbjct: 258 IELGEFFN--DGGIMDNDEIEMSALETKQLNRKCGLIIQGIEIRP 268

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
O804945.0e-6948.08F-box protein PP2-B15 OS=Arabidopsis thaliana OX=3702 GN=PP2B15 PE=2 SV=2[more]
Q9C7J95.4e-6346.50F-box protein PP2-B13 OS=Arabidopsis thaliana OX=3702 GN=PP2B13 PE=2 SV=1[more]
Q9C7K01.6e-6245.99F-box protein VBF OS=Arabidopsis thaliana OX=3702 GN=VBF PE=1 SV=1[more]
Q3E6P49.2e-4738.33F-box protein At2g02240 OS=Arabidopsis thaliana OX=3702 GN=At2g02240 PE=2 SV=1[more]
Q9ZVQ64.6e-4637.19F-box protein PP2-B10 OS=Arabidopsis thaliana OX=3702 GN=PP2B10 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A6J1FGV35.1e-16598.99F-box protein PP2-B15-like OS=Cucurbita moschata OX=3662 GN=LOC111444065 PE=4 SV... [more]
A0A6J1HPX53.9e-14991.53F-box protein PP2-B15-like OS=Cucurbita maxima OX=3661 GN=LOC111465617 PE=4 SV=1[more]
A0A6J1DQK91.3e-11570.90F-box protein VBF-like OS=Momordica charantia OX=3673 GN=LOC111023316 PE=4 SV=1[more]
A0A6J1DS068.0e-11068.90F-box protein VBF-like OS=Momordica charantia OX=3673 GN=LOC111023312 PE=4 SV=1[more]
A0A6J1KF365.2e-10966.44F-box protein PP2-B15-like OS=Cucurbita maxima OX=3661 GN=LOC111493739 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G09155.13.6e-7048.08phloem protein 2-B15 [more]
AT1G56240.13.8e-6446.50phloem protein 2-B13 [more]
AT1G56250.11.1e-6345.99phloem protein 2-B14 [more]
AT2G02240.16.6e-4838.33F-box family protein [more]
AT2G02360.13.3e-4737.19phloem protein 2-B10 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025886Phloem protein 2-likePFAMPF14299PP2coord: 101..294
e-value: 2.5E-46
score: 157.4
NoneNo IPR availablePANTHERPTHR32278:SF74F-BOX PROTEIN PP2-B15coord: 9..295
NoneNo IPR availablePANTHERPTHR32278FAMILY NOT NAMEDcoord: 9..295
IPR001810F-box domainPROSITEPS50181FBOXcoord: 4..50
score: 9.894885
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 5..81

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh12G010630.1CmoCh12G010630.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding