CmoCh12G010360 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTAACACTTCCATCTTCGGAAGCTTCTTTCATTTCTTATGTCTCTTCCATATGTTTGAGATTTCCTTGCCAAATTCGCATCAAATTACCATTTTCTTTCCGAGATTCGACTTGGCTCGAGAGAATTCCTGTAATTAGTGCCTTATTCAACTCGTGAGCTTCAGGAATTTCCATGGATTTCGATTTTGATTTTGATTTTGATTTCGATTTCGGGAAGAAGCGCCTCCAAGTTCTGGTGTTCATCATCGGCATCATCTCCCTCAGTTTCACAGGTACGTTTGATTTGGATTGCATTTCTGATATAAATCTGTTGAAACGTAGTTGAATCAAGGGTTCAAGATGCGAGTATCATAATTATTTCGCTGTTCGGAATTTGATTTTGTTTGTTTTCCGAGAAAGTAGAGAATGACGAAGGAAGAAAGAACAGAAAATCATCGTGTTTCTGTGATGGAGTTTAGTTTATTGCAAGATCTCGAAGAAATGAAGCTGGCTGTTATCTCGTTTATGGTTTCTGGTTTATGCATCGAATTAAAATCTGTGAAGTTTTGTGTTGATTTTGCTTGAATTTATCATAGATTTGATTTGGTCAAATCATATATTACATCTAGAACAAGTTTTGGATTGATGTTCCTTTTCATTTCTATGTGTACAAACATCCCAAGATGTGTAGAAAGGGAAAAAAATTTATATTCAGTTTAGAATCTGTTTGGAAAATTTTCTATAAAAGAACTTATAACTCAGAACCACTCTCAAATTTAGAAGTTCAAGGAGAAATTAGAGGGAAAAAATTTAAATCTCAATCTTGTGATACAGATTTCTTTGCCTATTGACAATGATCATTGAATTCCCAAAGTGTTCAACGCATTCTAATGTTGATCTTGAAGAGGAATTTGGTATTATGTTGAGAATCAAACGTTAAGTATTCAAATGATTGAAGGTTTTTATGTCTTGAATCTTACAGGGTGCTTATATTCTGGAGTTATTAGGCTTTGTTTGGTATATCATATCATTACATATACGTTTGATCCTTAGTTTTTGACATTGTTGTACTTAGAGTTGCTTATGTTCGTGTTGTAAAAAAATATTATAGCGGAGAAATGTCGACATCTGGTCGGGGAGGAAGCGTCGTCCCAGAGTGGAAAGTTCACATTCTTGAATTGTCTTGACATGGGTTCTGGATCTGTTGCTTGTGGTGTGAAGGAGGGGGTGAAGCTCTACTTCTACAACGTCCAATCGGCCCATGTCGAGAGGGCACGACTCAAAGCTGTCGAGATGACATTGGCCGATGCAGTAGCGCAGGGAATGTCTGCAAAAGAAGCAGCAAAACACGCACAAAAAGAGGGAGTCAAGGCAGCAAAGCTGGCAAAGAGACAAGCGAAACGCATCATCGGGCCGATCATCTCTTCTGGATGGGATTTTTTCGAAGCGTTATACTATGGTGGTTCAGTCACAGAAGGCTTCCTCAGGGGCTCTGGGACACTTTTCGGTGCCTATGGGGGCGGTTTCATTGGCGAGCAAAGGCTCGGGAGGTTCGGGTACCTCGTAGGAAGTCATTTAGGTAGTTGGGTTGGAGGTAGAATAGGACTCATGGTATATGATGTTGTCAATGGACTGCATTTCCTGCTCAATTTTGTTGAAGGTGAAGAAGAAAGTGTAGTCCATGAAAAGGCAGCTTATGTCGAAAACGAAGCTTCGGACGACTCCCTTGTTAACGAAGCTCCTATTTCCACGAACTCCGAAGGTTCTGAAGAATCATACAACTATGAATCTTCGCCGTCTGCTGGTTCGGTAGATTATGAAAACTCCGAGTCTAGGTGACGTAATTTTCTTGATGGTTGGTTGAATTAGAATCAAGAATGTGAGAAAAATAGGGTTCGCTTGCTTTACAAACACATTTTTAGATGTTCTTTCATGCTCATGAACGTAGAAAACTGTTATTTCAAGACTCCAATTTCAGAAGGTTTTCTTCATGTGACTGTGGGATGTAACTTAGAAAACCTCATGGAATTGGAAATTTATAGAAAACTTGATACTCATTTTGGGGTGTTTGTTTATTTTCAATCCAATTCATACTGGTTTGATTCGAACGGAAGTTGAATGAACTGATCCATTGTTATACGAC TTAACACTTCCATCTTCGGAAGCTTCTTTCATTTCTTATGTCTCTTCCATATGTTTGAGATTTCCTTGCCAAATTCGCATCAAATTACCATTTTCTTTCCGAGATTCGACTTGGCTCGAGAGAATTCCTGTAATTAGTGCCTTATTCAACTCGTGAGCTTCAGGAATTTCCATGGATTTCGATTTTGATTTTGATTTTGATTTCGATTTCGGGAAGAAGCGCCTCCAAGTTCTGGTGTTCATCATCGGCATCATCTCCCTCAGTTTCACAGCGGAGAAATGTCGACATCTGGTCGGGGAGGAAGCGTCGTCCCAGAGTGGAAAGTTCACATTCTTGAATTGTCTTGACATGGGTTCTGGATCTGTTGCTTGTGGTGTGAAGGAGGGGGTGAAGCTCTACTTCTACAACGTCCAATCGGCCCATGTCGAGAGGGCACGACTCAAAGCTGTCGAGATGACATTGGCCGATGCAGTAGCGCAGGGAATGTCTGCAAAAGAAGCAGCAAAACACGCACAAAAAGAGGGAGTCAAGGCAGCAAAGCTGGCAAAGAGACAAGCGAAACGCATCATCGGGCCGATCATCTCTTCTGGATGGGATTTTTTCGAAGCGTTATACTATGGTGGTTCAGTCACAGAAGGCTTCCTCAGGGGCTCTGGGACACTTTTCGGTGCCTATGGGGGCGGTTTCATTGGCGAGCAAAGGCTCGGGAGGTTCGGGTACCTCGTAGGAAGTCATTTAGGTAGTTGGGTTGGAGGTAGAATAGGACTCATGGTATATGATGTTGTCAATGGACTGCATTTCCTGCTCAATTTTGTTGAAGGTGAAGAAGAAAGTGTAGTCCATGAAAAGGCAGCTTATGTCGAAAACGAAGCTTCGGACGACTCCCTTGTTAACGAAGCTCCTATTTCCACGAACTCCGAAGGTTCTGAAGAATCATACAACTATGAATCTTCGCCGTCTGCTGGTTCGGTAGATTATGAAAACTCCGAGTCTAGGTGACGTAATTTTCTTGATGGTTGGTTGAATTAGAATCAAGAATGTGAGAAAAATAGGGTTCGCTTGCTTTACAAACACATTTTTAGATGTTCTTTCATGCTCATGAACGTAGAAAACTGTTATTTCAAGACTCCAATTTCAGAAGGTTTTCTTCATGTGACTGTGGGATGTAACTTAGAAAACCTCATGGAATTGGAAATTTATAGAAAACTTGATACTCATTTTGGGGTGTTTGTTTATTTTCAATCCAATTCATACTGGTTTGATTCGAACGGAAGTTGAATGAACTGATCCATTGTTATACGAC ATGGATTTCGATTTTGATTTTGATTTTGATTTCGATTTCGGGAAGAAGCGCCTCCAAGTTCTGGTGTTCATCATCGGCATCATCTCCCTCAGTTTCACAGCGGAGAAATGTCGACATCTGGTCGGGGAGGAAGCGTCGTCCCAGAGTGGAAAGTTCACATTCTTGAATTGTCTTGACATGGGTTCTGGATCTGTTGCTTGTGGTGTGAAGGAGGGGGTGAAGCTCTACTTCTACAACGTCCAATCGGCCCATGTCGAGAGGGCACGACTCAAAGCTGTCGAGATGACATTGGCCGATGCAGTAGCGCAGGGAATGTCTGCAAAAGAAGCAGCAAAACACGCACAAAAAGAGGGAGTCAAGGCAGCAAAGCTGGCAAAGAGACAAGCGAAACGCATCATCGGGCCGATCATCTCTTCTGGATGGGATTTTTTCGAAGCGTTATACTATGGTGGTTCAGTCACAGAAGGCTTCCTCAGGGGCTCTGGGACACTTTTCGGTGCCTATGGGGGCGGTTTCATTGGCGAGCAAAGGCTCGGGAGGTTCGGGTACCTCGTAGGAAGTCATTTAGGTAGTTGGGTTGGAGGTAGAATAGGACTCATGGTATATGATGTTGTCAATGGACTGCATTTCCTGCTCAATTTTGTTGAAGGTGAAGAAGAAAGTGTAGTCCATGAAAAGGCAGCTTATGTCGAAAACGAAGCTTCGGACGACTCCCTTGTTAACGAAGCTCCTATTTCCACGAACTCCGAAGGTTCTGAAGAATCATACAACTATGAATCTTCGCCGTCTGCTGGTTCGGTAGATTATGAAAACTCCGAGTCTAGGTGA MDFDFDFDFDFDFGKKRLQVLVFIIGIISLSFTAEKCRHLVGEEASSQSGKFTFLNCLDMGSGSVACGVKEGVKLYFYNVQSAHVERARLKAVEMTLADAVAQGMSAKEAAKHAQKEGVKAAKLAKRQAKRIIGPIISSGWDFFEALYYGGSVTEGFLRGSGTLFGAYGGGFIGEQRLGRFGYLVGSHLGSWVGGRIGLMVYDVVNGLHFLLNFVEGEEESVVHEKAAYVENEASDDSLVNEAPISTNSEGSEESYNYESSPSAGSVDYENSESR Homology
BLAST of CmoCh12G010360 vs. ExPASy TrEMBL
Match: A0A6J1FCL6 (uncharacterized protein LOC111444389 OS=Cucurbita moschata OX=3662 GN=LOC111444389 PE=4 SV=1) HSP 1 Score: 524.6 bits (1350), Expect = 2.4e-145 Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 0
BLAST of CmoCh12G010360 vs. ExPASy TrEMBL
Match: A0A6J1HMX1 (uncharacterized protein LOC111465644 OS=Cucurbita maxima OX=3661 GN=LOC111465644 PE=4 SV=1) HSP 1 Score: 472.6 bits (1215), Expect = 1.1e-129 Identity = 245/251 (97.61%), Postives = 248/251 (98.80%), Query Frame = 0
BLAST of CmoCh12G010360 vs. ExPASy TrEMBL
Match: A0A5D3B9C7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G001140 PE=4 SV=1) HSP 1 Score: 436.4 bits (1121), Expect = 8.7e-119 Identity = 232/270 (85.93%), Postives = 245/270 (90.74%), Query Frame = 0
BLAST of CmoCh12G010360 vs. ExPASy TrEMBL
Match: A0A5A7U1F4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G001360 PE=4 SV=1) HSP 1 Score: 434.5 bits (1116), Expect = 3.3e-118 Identity = 231/270 (85.56%), Postives = 245/270 (90.74%), Query Frame = 0
BLAST of CmoCh12G010360 vs. ExPASy TrEMBL
Match: A0A1S3BXT9 (uncharacterized protein LOC103494253 OS=Cucumis melo OX=3656 GN=LOC103494253 PE=4 SV=1) HSP 1 Score: 434.5 bits (1116), Expect = 3.3e-118 Identity = 231/270 (85.56%), Postives = 245/270 (90.74%), Query Frame = 0
BLAST of CmoCh12G010360 vs. TAIR 10
Match: AT1G56423.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 285.0 bits (728), Expect = 6.3e-77 Identity = 153/264 (57.95%), Postives = 193/264 (73.11%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|