CmoCh12G010310 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh12G010310
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionPentatricopeptide repeat-containing protein
LocationCmo_Chr12: 9637202 .. 9639109 (+)
RNA-Seq ExpressionCmoCh12G010310
SyntenyCmoCh12G010310
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTCTCTCTCTAACTTTCCGTAGATTTTCAAATTTCTCAGCATTCCCACCTACCATTTCCAATGCCGCCTGTCAGATTCGACGATCCTTGGGACGAGAAGGACGAAGTTTCAGAGGGAAAATGCGCGTTCCCCGTTGTAGCTCTCTGCCCTTGTCTCGTATGTTTGATTCTCGTTCTCATGGTAGTTTTCATTCTTCTCTTTGTCAAATTCCATTTATATTGCCACACGCCTCTTCATTCTTTGTTCCTCAAGAAACAATGTTGATTGCTACGAGTTCCCGAACGATTAATTTCAGAAATCCCCCTTTCCCCTGTTTTGATTTACTAGTTAGAGGCTTTTGCGATCGAAATTCGCATTCGGATTCTGAAATTGAATGTGAGATTAGTGAGGATGATGATCGTGAGAGTGATTCTAGGGCAAATCCGATCGAAGTTGATCGTGTATGCAAGGTGCTCGACGAATTGTTTGCTTTAGATAGAAATATGGAGGCTGTTCTTGATGAGTGTGGTGTCATATTGTCTCACGATCTGGTTTTGAATGTCTTGGAAAGATTCAAACAAGCTCGTAAACCTGCATTTAGATTCTTCTGTTGGGCTGCTCATAAACCAGGATTTTCCCATGATTCCAAAACTTATAATATGATGATGACAATCTTGGGGAAGACGAGGCAGTTTGAAACCATGGTTTCATTGCTTGAAGAAATGGCTGAAAAAGAGCTTTTGACAATGGAAACTTTCACCATTTGTTTCAAATCCTTTGCAGCTGCAAAAGAGAGAAGGAAAGCCATTGGGATCTTTGAATTGATGAAGAAGTATAAATATAAAGTTGGTGTAGAAACTATAAACTGTTTGCTTGATAGTCTAGGCAGGGCAAAGCTTGGTAAAGAAGCTCAAGCCGTTTTCGAGAAGTTGTGTGGTCGGTTTACACCGAATTTGCAGACGTACACGGTTTTGTTGAACGGTTGGTGTCGGGTTAGGAATCTAATGGAGGCTGGGAAGATATGGAATCTGATGATTGATGAAGGTTTTAAGCCTGATATTGTTGCTCATAATACCATGCTTGAAGGTTTGTTGAGATGTAAGAAGAGGTCAGATGCTATCAAGTTGTTTGAGGTTATGAAAGCGAAAGGCCCGTCTCCTGACGTTAAAAGCTACACGATCTTGGTTCGAGATTTCTGTAAACAAAACAAGATGAAAGAAGCGGTTGAGTATTTCGAAGAAATGCAGGCGGCGGGATGTCGACCCGACACTGGAATCTATACATGTTTGATCACAGGGTTTGGGAATCAAAGAAGAATGGACATGATTTATGGGATACTAAAAGAGATGAAAACAAATGGTTGCCCACCTGATGGGAAGACCTATAATTCTCTGATCAAGTTGATGACGAACAGGCGAATGCCCGACGATGCTGGTCGGATATACAACAAGATGATTGAAAGCGGTATTAAACCAACGATCCACACGTACAACATGATGATGAAGTCCTACTTTCAAACAAGGAACTACGAAATGGGTGTTTTTGTTTGGGATGAAATGAAGCAAAAGGGGTGCTGCCCGGATGATAACTCGTACACCGTGTTCATCGGAGGGCTCATAAGTCATGGACGATGCAGCGAAGCAGGTAAGTATCTCGAGGAAATGATCGAGAAAGGAATGAAGGCTCCTCAGCTTGATTACAACAAATTTGCTGCTGATTTCTCTAGAGCTGGAAGACCTGACATTCTTGAAGAATTAGCTCAAAAACTGAAATTCTCTGGTAAATTTGAAGCATCCAATGTGATTGCACGATGGGCTGAGATGATGAGGAAGAGAGTCAAGAGAAGAACACCTACGAACATTGTCAATGCTGATCATAGCAACCGACTGATACACGATGAACACTATTTTTCGGCCCGTCGATGA

mRNA sequence

ATGTCTCTCTCTCTAACTTTCCGTAGATTTTCAAATTTCTCAGCATTCCCACCTACCATTTCCAATGCCGCCTGTCAGATTCGACGATCCTTGGGACGAGAAGGACGAAGTTTCAGAGGGAAAATGCGCGTTCCCCGTTGTAGCTCTCTGCCCTTGTCTCGTATGTTTGATTCTCGTTCTCATGGTAGTTTTCATTCTTCTCTTTGTCAAATTCCATTTATATTGCCACACGCCTCTTCATTCTTTGTTCCTCAAGAAACAATGTTGATTGCTACGAGTTCCCGAACGATTAATTTCAGAAATCCCCCTTTCCCCTGTTTTGATTTACTAGTTAGAGGCTTTTGCGATCGAAATTCGCATTCGGATTCTGAAATTGAATGTGAGATTAGTGAGGATGATGATCGTGAGAGTGATTCTAGGGCAAATCCGATCGAAGTTGATCGTGTATGCAAGGTGCTCGACGAATTGTTTGCTTTAGATAGAAATATGGAGGCTGTTCTTGATGAGTGTGGTGTCATATTGTCTCACGATCTGGTTTTGAATGTCTTGGAAAGATTCAAACAAGCTCGTAAACCTGCATTTAGATTCTTCTGTTGGGCTGCTCATAAACCAGGATTTTCCCATGATTCCAAAACTTATAATATGATGATGACAATCTTGGGGAAGACGAGGCAGTTTGAAACCATGGTTTCATTGCTTGAAGAAATGGCTGAAAAAGAGCTTTTGACAATGGAAACTTTCACCATTTGTTTCAAATCCTTTGCAGCTGCAAAAGAGAGAAGGAAAGCCATTGGGATCTTTGAATTGATGAAGAAGTATAAATATAAAGTTGGTGTAGAAACTATAAACTGTTTGCTTGATAGTCTAGGCAGGGCAAAGCTTGGTAAAGAAGCTCAAGCCGTTTTCGAGAAGTTGTGTGGTCGGTTTACACCGAATTTGCAGACGTACACGGTTTTGTTGAACGGTTGGTGTCGGGTTAGGAATCTAATGGAGGCTGGGAAGATATGGAATCTGATGATTGATGAAGGTTTTAAGCCTGATATTGTTGCTCATAATACCATGCTTGAAGGTTTGTTGAGATGTAAGAAGAGGTCAGATGCTATCAAGTTGTTTGAGGTTATGAAAGCGAAAGGCCCGTCTCCTGACGTTAAAAGCTACACGATCTTGGTTCGAGATTTCTGTAAACAAAACAAGATGAAAGAAGCGGTTGAGTATTTCGAAGAAATGCAGGCGGCGGGATGTCGACCCGACACTGGAATCTATACATGTTTGATCACAGGGTTTGGGAATCAAAGAAGAATGGACATGATTTATGGGATACTAAAAGAGATGAAAACAAATGGTTGCCCACCTGATGGGAAGACCTATAATTCTCTGATCAAGTTGATGACGAACAGGCGAATGCCCGACGATGCTGGTCGGATATACAACAAGATGATTGAAAGCGGTATTAAACCAACGATCCACACGTACAACATGATGATGAAGTCCTACTTTCAAACAAGGAACTACGAAATGGGTGTTTTTGTTTGGGATGAAATGAAGCAAAAGGGGTGCTGCCCGGATGATAACTCGTACACCGTGTTCATCGGAGGGCTCATAAGTCATGGACGATGCAGCGAAGCAGGTAAGTATCTCGAGGAAATGATCGAGAAAGGAATGAAGGCTCCTCAGCTTGATTACAACAAATTTGCTGCTGATTTCTCTAGAGCTGGAAGACCTGACATTCTTGAAGAATTAGCTCAAAAACTGAAATTCTCTGGTAAATTTGAAGCATCCAATGTGATTGCACGATGGGCTGAGATGATGAGGAAGAGAGTCAAGAGAAGAACACCTACGAACATTGTCAATGCTGATCATAGCAACCGACTGATACACGATGAACACTATTTTTCGGCCCGTCGATGA

Coding sequence (CDS)

ATGTCTCTCTCTCTAACTTTCCGTAGATTTTCAAATTTCTCAGCATTCCCACCTACCATTTCCAATGCCGCCTGTCAGATTCGACGATCCTTGGGACGAGAAGGACGAAGTTTCAGAGGGAAAATGCGCGTTCCCCGTTGTAGCTCTCTGCCCTTGTCTCGTATGTTTGATTCTCGTTCTCATGGTAGTTTTCATTCTTCTCTTTGTCAAATTCCATTTATATTGCCACACGCCTCTTCATTCTTTGTTCCTCAAGAAACAATGTTGATTGCTACGAGTTCCCGAACGATTAATTTCAGAAATCCCCCTTTCCCCTGTTTTGATTTACTAGTTAGAGGCTTTTGCGATCGAAATTCGCATTCGGATTCTGAAATTGAATGTGAGATTAGTGAGGATGATGATCGTGAGAGTGATTCTAGGGCAAATCCGATCGAAGTTGATCGTGTATGCAAGGTGCTCGACGAATTGTTTGCTTTAGATAGAAATATGGAGGCTGTTCTTGATGAGTGTGGTGTCATATTGTCTCACGATCTGGTTTTGAATGTCTTGGAAAGATTCAAACAAGCTCGTAAACCTGCATTTAGATTCTTCTGTTGGGCTGCTCATAAACCAGGATTTTCCCATGATTCCAAAACTTATAATATGATGATGACAATCTTGGGGAAGACGAGGCAGTTTGAAACCATGGTTTCATTGCTTGAAGAAATGGCTGAAAAAGAGCTTTTGACAATGGAAACTTTCACCATTTGTTTCAAATCCTTTGCAGCTGCAAAAGAGAGAAGGAAAGCCATTGGGATCTTTGAATTGATGAAGAAGTATAAATATAAAGTTGGTGTAGAAACTATAAACTGTTTGCTTGATAGTCTAGGCAGGGCAAAGCTTGGTAAAGAAGCTCAAGCCGTTTTCGAGAAGTTGTGTGGTCGGTTTACACCGAATTTGCAGACGTACACGGTTTTGTTGAACGGTTGGTGTCGGGTTAGGAATCTAATGGAGGCTGGGAAGATATGGAATCTGATGATTGATGAAGGTTTTAAGCCTGATATTGTTGCTCATAATACCATGCTTGAAGGTTTGTTGAGATGTAAGAAGAGGTCAGATGCTATCAAGTTGTTTGAGGTTATGAAAGCGAAAGGCCCGTCTCCTGACGTTAAAAGCTACACGATCTTGGTTCGAGATTTCTGTAAACAAAACAAGATGAAAGAAGCGGTTGAGTATTTCGAAGAAATGCAGGCGGCGGGATGTCGACCCGACACTGGAATCTATACATGTTTGATCACAGGGTTTGGGAATCAAAGAAGAATGGACATGATTTATGGGATACTAAAAGAGATGAAAACAAATGGTTGCCCACCTGATGGGAAGACCTATAATTCTCTGATCAAGTTGATGACGAACAGGCGAATGCCCGACGATGCTGGTCGGATATACAACAAGATGATTGAAAGCGGTATTAAACCAACGATCCACACGTACAACATGATGATGAAGTCCTACTTTCAAACAAGGAACTACGAAATGGGTGTTTTTGTTTGGGATGAAATGAAGCAAAAGGGGTGCTGCCCGGATGATAACTCGTACACCGTGTTCATCGGAGGGCTCATAAGTCATGGACGATGCAGCGAAGCAGGTAAGTATCTCGAGGAAATGATCGAGAAAGGAATGAAGGCTCCTCAGCTTGATTACAACAAATTTGCTGCTGATTTCTCTAGAGCTGGAAGACCTGACATTCTTGAAGAATTAGCTCAAAAACTGAAATTCTCTGGTAAATTTGAAGCATCCAATGTGATTGCACGATGGGCTGAGATGATGAGGAAGAGAGTCAAGAGAAGAACACCTACGAACATTGTCAATGCTGATCATAGCAACCGACTGATACACGATGAACACTATTTTTCGGCCCGTCGATGA

Protein sequence

MSLSLTFRRFSNFSAFPPTISNAACQIRRSLGREGRSFRGKMRVPRCSSLPLSRMFDSRSHGSFHSSLCQIPFILPHASSFFVPQETMLIATSSRTINFRNPPFPCFDLLVRGFCDRNSHSDSEIECEISEDDDRESDSRANPIEVDRVCKVLDELFALDRNMEAVLDECGVILSHDLVLNVLERFKQARKPAFRFFCWAAHKPGFSHDSKTYNMMMTILGKTRQFETMVSLLEEMAEKELLTMETFTICFKSFAAAKERRKAIGIFELMKKYKYKVGVETINCLLDSLGRAKLGKEAQAVFEKLCGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNLMIDEGFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQNKMKEAVEYFEEMQAAGCRPDTGIYTCLITGFGNQRRMDMIYGILKEMKTNGCPPDGKTYNSLIKLMTNRRMPDDAGRIYNKMIESGIKPTIHTYNMMMKSYFQTRNYEMGVFVWDEMKQKGCCPDDNSYTVFIGGLISHGRCSEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKLKFSGKFEASNVIARWAEMMRKRVKRRTPTNIVNADHSNRLIHDEHYFSARR
Homology
BLAST of CmoCh12G010310 vs. ExPASy Swiss-Prot
Match: Q9LZP3 (Pentatricopeptide repeat-containing protein At3g62470, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g62470 PE=2 SV=1)

HSP 1 Score: 718.8 bits (1854), Expect = 5.5e-206
Identity = 344/506 (67.98%), Postives = 418/506 (82.61%), Query Frame = 0

Query: 112 RGFCDRNSH----SDSEIECEISEDDDRE---SDSRANPIEVDRVCKVLDELFALDRNME 171
           RGF   +S+     D E+E E   D++      +S  NP EV+RVCKV+DELFALDRNME
Sbjct: 90  RGFSSGSSNVSDGCDEEVESECDNDEETGVSCVESSTNPEEVERVCKVIDELFALDRNME 149

Query: 172 AVLDECGVILSHDLVLNVLERFKQARKPAFRFFCWAAHKPGFSHDSKTYNMMMTILGKTR 231
           AVLDE  + LSHDL++ VLERF+ ARKPAFRFFCWAA + GF+HDS+TYN MM+IL KTR
Sbjct: 150 AVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTR 209

Query: 232 QFETMVSLLEEMAEKELLTMETFTICFKSFAAAKERRKAIGIFELMKKYKYKVGVETINC 291
           QFETMVS+LEEM  K LLTMETFTI  K+FAAAKER+KA+GIFELMKKYK+K+GVETINC
Sbjct: 210 QFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINC 269

Query: 292 LLDSLGRAKLGKEAQAVFEKLCGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNLMIDEGF 351
           LLDSLGRAKLGKEAQ +F+KL  RFTPN+ TYTVLLNGWCRVRNL+EA +IWN MID+G 
Sbjct: 270 LLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGL 329

Query: 352 KPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQNKMKEAVE 411
           KPDIVAHN MLEGLLR +K+SDAIKLF VMK+KGP P+V+SYTI++RDFCKQ+ M+ A+E
Sbjct: 330 KPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIE 389

Query: 412 YFEEMQAAGCRPDTGIYTCLITGFGNQRRMDMIYGILKEMKTNGCPPDGKTYNSLIKLMT 471
           YF++M  +G +PD  +YTCLITGFG Q+++D +Y +LKEM+  G PPDGKTYN+LIKLM 
Sbjct: 390 YFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMA 449

Query: 472 NRRMPDDAGRIYNKMIESGIKPTIHTYNMMMKSYFQTRNYEMGVFVWDEMKQKGCCPDDN 531
           N++MP+ A RIYNKMI++ I+P+IHT+NM+MKSYF  RNYEMG  VW+EM +KG CPDDN
Sbjct: 450 NQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDN 509

Query: 532 SYTVFIGGLISHGRCSEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKL 591
           SYTV I GLI  G+  EA +YLEEM++KGMK P +DYNKFAADF R G+P+I EELAQ+ 
Sbjct: 510 SYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRA 569

Query: 592 KFSGKFEASNVIARWAEMMRKRVKRR 611
           KFSGKF A+ + ARWA+M R+R K+R
Sbjct: 570 KFSGKFAAAEIFARWAQMTRRRFKQR 595

BLAST of CmoCh12G010310 vs. ExPASy Swiss-Prot
Match: Q9LEQ7 (Pentatricopeptide repeat-containing protein At5g14820, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g14820 PE=2 SV=1)

HSP 1 Score: 717.6 bits (1851), Expect = 1.2e-205
Identity = 345/506 (68.18%), Postives = 416/506 (82.21%), Query Frame = 0

Query: 112 RGFCDRNSH----SDSEIECEISEDDDRE---SDSRANPIEVDRVCKVLDELFALDRNME 171
           RGF   +S+     D E+E E   D++      +S  NP EV+RVCKV+DELFALDRNME
Sbjct: 89  RGFSSGSSNVSDGCDEEVESECDNDEETGVSCVESSTNPEEVERVCKVIDELFALDRNME 148

Query: 172 AVLDECGVILSHDLVLNVLERFKQARKPAFRFFCWAAHKPGFSHDSKTYNMMMTILGKTR 231
           AVLDE  + LSHDL++ VLERF+ ARKPAFRFFCWAA + GF+HDS+TYN MM+IL KTR
Sbjct: 149 AVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTR 208

Query: 232 QFETMVSLLEEMAEKELLTMETFTICFKSFAAAKERRKAIGIFELMKKYKYKVGVETINC 291
           QFETMVS+LEEM  K LLTMETFTI  K+FAAAKER+KA+GIFELMKKYK+K+GVETINC
Sbjct: 209 QFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINC 268

Query: 292 LLDSLGRAKLGKEAQAVFEKLCGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNLMIDEGF 351
           LLDSLGRAKLGKEAQ +F+KL  RFTPN+ TYTVLLNGWCRVRNL+EA +IWN MID G 
Sbjct: 269 LLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGL 328

Query: 352 KPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQNKMKEAVE 411
           KPDIVAHN MLEGLLR  K+SDAIKLF VMK+KGP P+V+SYTI++RDFCKQ+ M+ A+E
Sbjct: 329 KPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIE 388

Query: 412 YFEEMQAAGCRPDTGIYTCLITGFGNQRRMDMIYGILKEMKTNGCPPDGKTYNSLIKLMT 471
           YF++M  +G +PD  +YTCLITGFG Q+++D +Y +LKEM+  G PPDGKTYN+LIKLM 
Sbjct: 389 YFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMA 448

Query: 472 NRRMPDDAGRIYNKMIESGIKPTIHTYNMMMKSYFQTRNYEMGVFVWDEMKQKGCCPDDN 531
           N++MP+   RIYNKMI++ I+P+IHT+NM+MKSYF  RNYEMG  VWDEM +KG CPDDN
Sbjct: 449 NQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDN 508

Query: 532 SYTVFIGGLISHGRCSEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKL 591
           SYTV I GLIS G+  EA +YLEEM++KGMK P +DYNKFAADF R G+P+I EELAQ+ 
Sbjct: 509 SYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRA 568

Query: 592 KFSGKFEASNVIARWAEMMRKRVKRR 611
           KFSGKF A+ + ARWA+M R+R K+R
Sbjct: 569 KFSGKFAAAEIFARWAQMTRRRCKQR 594

BLAST of CmoCh12G010310 vs. ExPASy Swiss-Prot
Match: Q3EAF8 (Pentatricopeptide repeat-containing protein At3g62540, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g62540 PE=2 SV=1)

HSP 1 Score: 714.5 bits (1843), Expect = 1.0e-204
Identity = 344/506 (67.98%), Postives = 415/506 (82.02%), Query Frame = 0

Query: 112 RGFCDRNSH----SDSEIECEISEDDDRE---SDSRANPIEVDRVCKVLDELFALDRNME 171
           RGF   +S+     D E+E E   D++      +S  NP EV+RVCKV+DELFALDRNME
Sbjct: 90  RGFSSGSSNVSDGCDEEVESECDNDEETGVSCVESSTNPEEVERVCKVIDELFALDRNME 149

Query: 172 AVLDECGVILSHDLVLNVLERFKQARKPAFRFFCWAAHKPGFSHDSKTYNMMMTILGKTR 231
           AVLDE  + LSHDL++ VLERF+ ARKPAFRFFCWAA + GF+H S+TYN MM+IL KTR
Sbjct: 150 AVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHASRTYNSMMSILAKTR 209

Query: 232 QFETMVSLLEEMAEKELLTMETFTICFKSFAAAKERRKAIGIFELMKKYKYKVGVETINC 291
           QFETMVS+LEEM  K LLTMETFTI  K+FAAAKER+KA+GIFELMKKYK+K+GVETINC
Sbjct: 210 QFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINC 269

Query: 292 LLDSLGRAKLGKEAQAVFEKLCGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNLMIDEGF 351
           LLDSLGRAKLGKEAQ +F+KL  RFTPN+ TYTVLLNGWCRVRNL+EA +IWN MID G 
Sbjct: 270 LLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGL 329

Query: 352 KPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQNKMKEAVE 411
           KPDIVAHN MLEGLLR  K+SDAIKLF VMK+KGP P+V+SYTI++RDFCKQ+ M+ A+E
Sbjct: 330 KPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIE 389

Query: 412 YFEEMQAAGCRPDTGIYTCLITGFGNQRRMDMIYGILKEMKTNGCPPDGKTYNSLIKLMT 471
           YF++M  +G +PD  +YTCLITGFG Q+++D +Y +LKEM+  G PPDGKTYN+LIKLM 
Sbjct: 390 YFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMA 449

Query: 472 NRRMPDDAGRIYNKMIESGIKPTIHTYNMMMKSYFQTRNYEMGVFVWDEMKQKGCCPDDN 531
           N++MP+   RIYNKMI++ I+P+IHT+NM+MKSYF  RNYEMG  VWDEM +KG CPDDN
Sbjct: 450 NQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDN 509

Query: 532 SYTVFIGGLISHGRCSEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKL 591
           SYTV I GLIS G+  EA +YLEEM++KGMK P +DYNKFAADF R G+P+I EELAQ+ 
Sbjct: 510 SYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRA 569

Query: 592 KFSGKFEASNVIARWAEMMRKRVKRR 611
           KFSGKF A+ + ARWA+M R+R K+R
Sbjct: 570 KFSGKFAAAEIFARWAQMTRRRCKQR 595

BLAST of CmoCh12G010310 vs. ExPASy Swiss-Prot
Match: Q9FZD4 (Putative pentatricopeptide repeat-containing protein At1g26500 OS=Arabidopsis thaliana OX=3702 GN=At1g26500 PE=3 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 1.8e-68
Identity = 167/527 (31.69%), Postives = 275/527 (52.18%), Query Frame = 0

Query: 90  IATSSRTINFRNPPFPCFDLLVRGFCDRNSHSDSEIECEISEDDDRESDSRANPIEVD-- 149
           + TS R IN  N    CF L  R F        +E+           + +   PI  D  
Sbjct: 5   VVTSRRMINIGNSIRRCFILNHRFF-------STEL-----------TPTTITPINQDHL 64

Query: 150 -RVCKVL-DELFALDRNMEAVLDECGVILSHDLVLNVLERFKQARKPAFRFFCWA-AHKP 209
            RVC +L  +  + D  + + L      L+H+  L V   F  + +P  RFF ++  H P
Sbjct: 65  LRVCTILYQQQNSPDSRLVSKLSSTKFQLTHEFFLQVCNNFPLSWRPVHRFFLYSQTHHP 124

Query: 210 GFSHDSKTYNMMMTILGKTRQFETMVSLLEEMAEKELLTMETFTICFKSFAAAKERRKAI 269
            F+H S T N M+ I+G +R  +    L +E+ ++ L+  +TF I  K+ A+A+E +K +
Sbjct: 125 DFTHTSTTSNKMLAIIGNSRNMDLFWELAQEIGKRGLVNDKTFRIVLKTLASARELKKCV 184

Query: 270 GIFELMKKYKYKVGVETINCLLDSLGRAKLGKEAQAVFEKLCGRFTPNLQTYTVLLNGWC 329
             F LM  + Y   VET+N  +++L + KL +EA+ VF KL     P+  TY  ++ G+C
Sbjct: 185 NYFHLMNGFGYLYNVETMNRGVETLCKEKLVEEAKFVFIKLKEFIKPDEITYRTMIQGFC 244

Query: 330 RVRNLMEAGKIWNLMIDEGFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAK-GPSPDV 389
            V +L+EA K+WNLM+DEGF  DI A   ++E LL+  +  +A K+F VM +K G   D 
Sbjct: 245 DVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKVFYVMVSKRGGDLDG 304

Query: 390 KSYTILVRDFCKQNKMKEAVEYFEEMQAAGCRPDTGIYTCLITGFGNQRRMDMIYGILKE 449
             Y +++   CK  ++  A + F+EM+  G   D   +  LI G   +RR+   YG+++ 
Sbjct: 305 GFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIYGLLVKRRVVEAYGLVEG 364

Query: 450 MKTNGCPPDGKTYNSLIKLMTNRRMPDDAGRIYNKMIESGIKPTIHTYNMMMKSYFQTRN 509
           ++     PD   Y+ LIK +   +   +A  ++ KMI+ G +P +HTY M+++ +   R 
Sbjct: 365 VEN----PDISIYHGLIKGLVKIKRASEATEVFRKMIQRGCEPIMHTYLMLLQGHLGRRG 424

Query: 510 YEMGVFVWDEMKQKGCCPDDNSYTVFIGGLISHGRCSEAGKYLEEMIEKGMKAPQLDYNK 569
                       +KG  P  N  T+F+GG+I  G+  E  KY+E  +++G++ P+ DY+K
Sbjct: 425 ------------RKGPDPLVNFDTIFVGGMIKAGKRLETTKYIERTLKRGLEVPRFDYSK 484

Query: 570 FAADFSRAGRPDILEELAQKLKFSGKFEASNVIARWAEMMRKRVKRR 611
           F   +S      + EE+A+KL+    F+ +++  R+ E M  R +RR
Sbjct: 485 FLHYYSNEEGVVMFEEMAKKLREVSLFDLADIFQRYGEKMTTRERRR 497

BLAST of CmoCh12G010310 vs. ExPASy Swiss-Prot
Match: Q9FVX2 (Pentatricopeptide repeat-containing protein At1g77360, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g77360 PE=2 SV=2)

HSP 1 Score: 258.5 bits (659), Expect = 2.0e-67
Identity = 136/422 (32.23%), Postives = 241/422 (57.11%), Query Frame = 0

Query: 163 MEAVLDECGVILSHDLVLNVLERFKQARKPAFRFFCWAAHKPGFSHDSKTYNMMMTILGK 222
           +++ LD+ G+ +S ++V +VL RF+ A    +RFF W+  +  + H  + Y+MM+    K
Sbjct: 87  LDSALDQSGLRVSQEVVEDVLNRFRNAGLLTYRFFQWSEKQRHYEHSVRAYHMMIESTAK 146

Query: 223 TRQFETMVSLLEEMAEKELLTMETFTICFKSFAAAKERRKAIGIFELMKKYKYKVGVETI 282
            RQ++ M  L+  M +K++L +ETF I  + +A A++  +AI  F +M+KY     +   
Sbjct: 147 IRQYKLMWDLINAMRKKKMLNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAF 206

Query: 283 NCLLDSLGRAKLGKEAQAVFEKLCGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNLMIDE 342
           N LL +L ++K  ++AQ VFE +  RFTP+ +TY++LL GW +  NL +A +++  MID 
Sbjct: 207 NGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDA 266

Query: 343 GFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQNKMKEA 402
           G  PDIV ++ M++ L +  +  +A+ +   M      P    Y++LV  +  +N+++EA
Sbjct: 267 GCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEA 326

Query: 403 VEYFEEMQAAGCRPDTGIYTCLITGFGNQRRMDMIYGILKEMKTNGCPPDGKTYNSLIKL 462
           V+ F EM+ +G + D  ++  LI  F    RM  +Y +LKEMK+ G  P+ K+ N +++ 
Sbjct: 327 VDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRH 386

Query: 463 MTNRRMPDDAGRIYNKMIESGIKPTIHTYNMMMKSYFQTRNYEMGVFVWDEMKQKGCCPD 522
           +  R   D+A  ++ KMI+   +P   TY M++K + + +  E    VW  M++KG  P 
Sbjct: 387 LIERGEKDEAFDVFRKMIKV-CEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPS 446

Query: 523 DNSYTVFIGGLISHGRCSEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQ 582
            ++++V I GL       +A   LEEMIE G++   + + +      +  R D+L+ L +
Sbjct: 447 MHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEEREDVLKFLNE 506

Query: 583 KL 585
           K+
Sbjct: 507 KM 507

BLAST of CmoCh12G010310 vs. ExPASy TrEMBL
Match: A0A6J1FBQ0 (pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111443968 PE=4 SV=1)

HSP 1 Score: 1296.2 bits (3353), Expect = 0.0e+00
Identity = 635/635 (100.00%), Postives = 635/635 (100.00%), Query Frame = 0

Query: 1   MSLSLTFRRFSNFSAFPPTISNAACQIRRSLGREGRSFRGKMRVPRCSSLPLSRMFDSRS 60
           MSLSLTFRRFSNFSAFPPTISNAACQIRRSLGREGRSFRGKMRVPRCSSLPLSRMFDSRS
Sbjct: 1   MSLSLTFRRFSNFSAFPPTISNAACQIRRSLGREGRSFRGKMRVPRCSSLPLSRMFDSRS 60

Query: 61  HGSFHSSLCQIPFILPHASSFFVPQETMLIATSSRTINFRNPPFPCFDLLVRGFCDRNSH 120
           HGSFHSSLCQIPFILPHASSFFVPQETMLIATSSRTINFRNPPFPCFDLLVRGFCDRNSH
Sbjct: 61  HGSFHSSLCQIPFILPHASSFFVPQETMLIATSSRTINFRNPPFPCFDLLVRGFCDRNSH 120

Query: 121 SDSEIECEISEDDDRESDSRANPIEVDRVCKVLDELFALDRNMEAVLDECGVILSHDLVL 180
           SDSEIECEISEDDDRESDSRANPIEVDRVCKVLDELFALDRNMEAVLDECGVILSHDLVL
Sbjct: 121 SDSEIECEISEDDDRESDSRANPIEVDRVCKVLDELFALDRNMEAVLDECGVILSHDLVL 180

Query: 181 NVLERFKQARKPAFRFFCWAAHKPGFSHDSKTYNMMMTILGKTRQFETMVSLLEEMAEKE 240
           NVLERFKQARKPAFRFFCWAAHKPGFSHDSKTYNMMMTILGKTRQFETMVSLLEEMAEKE
Sbjct: 181 NVLERFKQARKPAFRFFCWAAHKPGFSHDSKTYNMMMTILGKTRQFETMVSLLEEMAEKE 240

Query: 241 LLTMETFTICFKSFAAAKERRKAIGIFELMKKYKYKVGVETINCLLDSLGRAKLGKEAQA 300
           LLTMETFTICFKSFAAAKERRKAIGIFELMKKYKYKVGVETINCLLDSLGRAKLGKEAQA
Sbjct: 241 LLTMETFTICFKSFAAAKERRKAIGIFELMKKYKYKVGVETINCLLDSLGRAKLGKEAQA 300

Query: 301 VFEKLCGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNLMIDEGFKPDIVAHNTMLEGLLR 360
           VFEKLCGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNLMIDEGFKPDIVAHNTMLEGLLR
Sbjct: 301 VFEKLCGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNLMIDEGFKPDIVAHNTMLEGLLR 360

Query: 361 CKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQNKMKEAVEYFEEMQAAGCRPDTGI 420
           CKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQNKMKEAVEYFEEMQAAGCRPDTGI
Sbjct: 361 CKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQNKMKEAVEYFEEMQAAGCRPDTGI 420

Query: 421 YTCLITGFGNQRRMDMIYGILKEMKTNGCPPDGKTYNSLIKLMTNRRMPDDAGRIYNKMI 480
           YTCLITGFGNQRRMDMIYGILKEMKTNGCPPDGKTYNSLIKLMTNRRMPDDAGRIYNKMI
Sbjct: 421 YTCLITGFGNQRRMDMIYGILKEMKTNGCPPDGKTYNSLIKLMTNRRMPDDAGRIYNKMI 480

Query: 481 ESGIKPTIHTYNMMMKSYFQTRNYEMGVFVWDEMKQKGCCPDDNSYTVFIGGLISHGRCS 540
           ESGIKPTIHTYNMMMKSYFQTRNYEMGVFVWDEMKQKGCCPDDNSYTVFIGGLISHGRCS
Sbjct: 481 ESGIKPTIHTYNMMMKSYFQTRNYEMGVFVWDEMKQKGCCPDDNSYTVFIGGLISHGRCS 540

Query: 541 EAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKLKFSGKFEASNVIARWA 600
           EAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKLKFSGKFEASNVIARWA
Sbjct: 541 EAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKLKFSGKFEASNVIARWA 600

Query: 601 EMMRKRVKRRTPTNIVNADHSNRLIHDEHYFSARR 636
           EMMRKRVKRRTPTNIVNADHSNRLIHDEHYFSARR
Sbjct: 601 EMMRKRVKRRTPTNIVNADHSNRLIHDEHYFSARR 635

BLAST of CmoCh12G010310 vs. ExPASy TrEMBL
Match: A0A6J1HPJ9 (pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111465475 PE=4 SV=1)

HSP 1 Score: 1258.8 bits (3256), Expect = 0.0e+00
Identity = 618/634 (97.48%), Postives = 623/634 (98.26%), Query Frame = 0

Query: 1   MSLSLTFRRFSNFSAFPPTISNAACQIRRSLGREGRSFRGKMRVPRCSSLPLSRMFDSRS 60
           MSLSLTFRRFSNFSAFP TISNAACQI+RSLGREGRSFRGKMRVPRCSSLPLSRMFDSRS
Sbjct: 1   MSLSLTFRRFSNFSAFPATISNAACQIQRSLGREGRSFRGKMRVPRCSSLPLSRMFDSRS 60

Query: 61  HGSFHSSLCQIPFILPHASSFFVPQETMLIATSSRTINFRNPPFPCFDLLVRGFCDRNSH 120
           HGSFHSSLCQIPFILPHASSFFVPQETMLIA SSRTINFRNPPFPCFDLLVRGFCDRNS 
Sbjct: 61  HGSFHSSLCQIPFILPHASSFFVPQETMLIAMSSRTINFRNPPFPCFDLLVRGFCDRNSD 120

Query: 121 SDSEIECEISEDDDRESDSRANPIEVDRVCKVLDELFALDRNMEAVLDECGVILSHDLVL 180
           SDSEIE EI EDDDRES+SRAN IEVDRVCKVLDELFALDRNMEAVLDECG+ILSHDLVL
Sbjct: 121 SDSEIEREIREDDDRESESRANSIEVDRVCKVLDELFALDRNMEAVLDECGIILSHDLVL 180

Query: 181 NVLERFKQARKPAFRFFCWAAHKPGFSHDSKTYNMMMTILGKTRQFETMVSLLEEMAEKE 240
           NVLERFKQARKPAFRFFCWAAHKPGFSHDSKTYNMMMTILGKTRQFETMVSLLEEMA KE
Sbjct: 181 NVLERFKQARKPAFRFFCWAAHKPGFSHDSKTYNMMMTILGKTRQFETMVSLLEEMAAKE 240

Query: 241 LLTMETFTICFKSFAAAKERRKAIGIFELMKKYKYKVGVETINCLLDSLGRAKLGKEAQA 300
           LLTMETFTICFKSFAAAKERRKAIGIFELMKKYKYKVGVETINCLLDSLGRAKLGKEAQA
Sbjct: 241 LLTMETFTICFKSFAAAKERRKAIGIFELMKKYKYKVGVETINCLLDSLGRAKLGKEAQA 300

Query: 301 VFEKLCGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNLMIDEGFKPDIVAHNTMLEGLLR 360
           VFEKLCGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNLMIDEGFKPDIVAHNTMLEGLLR
Sbjct: 301 VFEKLCGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNLMIDEGFKPDIVAHNTMLEGLLR 360

Query: 361 CKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQNKMKEAVEYFEEMQAAGCRPDTGI 420
           CKKRSDAIK+FEVMKAKGPSPDVKSYTILVRDFCKQNKMKEAVEYFEEMQ AGCRPD GI
Sbjct: 361 CKKRSDAIKMFEVMKAKGPSPDVKSYTILVRDFCKQNKMKEAVEYFEEMQRAGCRPDAGI 420

Query: 421 YTCLITGFGNQRRMDMIYGILKEMKTNGCPPDGKTYNSLIKLMTNRRMPDDAGRIYNKMI 480
           YTCLITGFGNQRRMDMIYGILKEMKTNGCPPDGKTYNSLIKLMTNRRMPDDA RIYNKMI
Sbjct: 421 YTCLITGFGNQRRMDMIYGILKEMKTNGCPPDGKTYNSLIKLMTNRRMPDDAVRIYNKMI 480

Query: 481 ESGIKPTIHTYNMMMKSYFQTRNYEMGVFVWDEMKQKGCCPDDNSYTVFIGGLISHGRCS 540
           ESGIKPTIHTYNMMMKSYFQTRNYEMGVFVWDEMKQKGCCPDDNSYTVFIGGLISHGRCS
Sbjct: 481 ESGIKPTIHTYNMMMKSYFQTRNYEMGVFVWDEMKQKGCCPDDNSYTVFIGGLISHGRCS 540

Query: 541 EAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKLKFSGKFEASNVIARWA 600
           EAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKLKFSGKFEASNVIARWA
Sbjct: 541 EAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKLKFSGKFEASNVIARWA 600

Query: 601 EMMRKRVKRRTPTNIVNADHSNRLIHDEHYFSAR 635
           EMMRKRVKRRTPTNIVNADHS+RLIHDEHYFS R
Sbjct: 601 EMMRKRVKRRTPTNIVNADHSSRLIHDEHYFSVR 634

BLAST of CmoCh12G010310 vs. ExPASy TrEMBL
Match: A0A5D3BDC8 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G001090 PE=4 SV=1)

HSP 1 Score: 1070.1 bits (2766), Expect = 3.5e-309
Identity = 529/623 (84.91%), Postives = 562/623 (90.21%), Query Frame = 0

Query: 1   MSLSL-TFRRFSNFSAFPPTISNAACQIRRSLGREGRSFRGKMRVPRCSSLPLSRMFDSR 60
           MSLSL T RR SNFS F   I NA   I+R++GR+GR FR KMR+  CSS+PL  MFDSR
Sbjct: 1   MSLSLITLRRASNFSDFTAGIYNAGYWIQRTMGRQGRRFRWKMRLLGCSSVPLFSMFDSR 60

Query: 61  SHGSFHSSLCQIPFILPHASSFFVPQETMLIATSSRTINFRNPPFPCFDLLVRGFCD-RN 120
           SH SFHSS CQIPFILP+ASSF VPQE +LI   SRTI+FRNP FP  DLL RG+CD  N
Sbjct: 61  SHRSFHSSHCQIPFILPYASSFSVPQEKLLIVPPSRTIDFRNPLFPSLDLLARGYCDLNN 120

Query: 121 SHSDSEIECEISEDDDRESDSRANPIEVDRVCKVLDELFALDRNMEAVLDECGVILSHDL 180
           S SDSEIECE SEDDDRE DSR +  EVDRVCKV+DELFALDRNMEAVLDECGV LSHDL
Sbjct: 121 SDSDSEIECEKSEDDDRECDSRVDSTEVDRVCKVIDELFALDRNMEAVLDECGVKLSHDL 180

Query: 181 VLNVLERFKQARKPAFRFFCWAAHKPGFSHDSKTYNMMMTILGKTRQFETMVSLLEEMAE 240
           VL VL RFK+ARKPAFRFFCWAA KPGF+HDSKTYNMMMTILGKTRQFETMVSLLEEMAE
Sbjct: 181 VLEVLARFKRARKPAFRFFCWAAQKPGFAHDSKTYNMMMTILGKTRQFETMVSLLEEMAE 240

Query: 241 KELLTMETFTICFKSFAAAKERRKAIGIFELMKKYKYKVGVETINCLLDSLGRAKLGKEA 300
           KELLTMETFTICFK+FAAAKER+KA+G+FELMKKYKYKVGVETINCLLDSLGRAKLGKEA
Sbjct: 241 KELLTMETFTICFKAFAAAKERKKAVGVFELMKKYKYKVGVETINCLLDSLGRAKLGKEA 300

Query: 301 QAVFEKLCGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNLMIDEGFKPDIVAHNTMLEGL 360
             +FEKL GRFTPNLQTYTVLLNGWCRVRNLMEAGKIWN MIDEGFKPDIVAHNTMLEGL
Sbjct: 301 LTIFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTMLEGL 360

Query: 361 LRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQNKMKEAVEYFEEMQAAGCRPDT 420
           LRCKKRSDAIKLFEVMK KGPSPDVKSYTILVR+FCKQ KMKEAVEYFEEMQ AGCRPD 
Sbjct: 361 LRCKKRSDAIKLFEVMKTKGPSPDVKSYTILVREFCKQAKMKEAVEYFEEMQGAGCRPDV 420

Query: 421 GIYTCLITGFGNQRRMDMIYGILKEMKTNGCPPDGKTYNSLIKLMTNRRMPDDAGRIYNK 480
            IYTCLITGFGNQ+RMDM+YG+LKEM+ NGCPPDGKTYN+LIKLMTN+RMPDDA RIY K
Sbjct: 421 AIYTCLITGFGNQKRMDMVYGLLKEMRANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKK 480

Query: 481 MIESGIKPTIHTYNMMMKSYFQTRNYEMGVFVWDEMKQKGCCPDDNSYTVFIGGLISHGR 540
           MIE+G +PTIHTY+MMMKSYFQTRNYEMGV  W+EMK+KGCCPDDNSYTVFIGGLIS GR
Sbjct: 481 MIENGFEPTIHTYSMMMKSYFQTRNYEMGVAAWNEMKRKGCCPDDNSYTVFIGGLISLGR 540

Query: 541 CSEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKLKFSGKFEASNVIAR 600
           C EAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQK+KFSGKFEAS+VIAR
Sbjct: 541 CVEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEASSVIAR 600

Query: 601 WAEMMRKRVKRRTPTNIVNADHS 622
           WAEMMRKRVKRR PTN  N DHS
Sbjct: 601 WAEMMRKRVKRRNPTNFTNGDHS 623

BLAST of CmoCh12G010310 vs. ExPASy TrEMBL
Match: A0A1S3BWC0 (pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103494147 PE=4 SV=1)

HSP 1 Score: 1069.7 bits (2765), Expect = 4.7e-309
Identity = 526/623 (84.43%), Postives = 563/623 (90.37%), Query Frame = 0

Query: 1   MSLSL-TFRRFSNFSAFPPTISNAACQIRRSLGREGRSFRGKMRVPRCSSLPLSRMFDSR 60
           MSLSL T RR SNFS F   I NA  +I+R++GR+GR FR KMR+P CSS+PL  MFDSR
Sbjct: 1   MSLSLITLRRASNFSDFTAGIYNAGYRIQRTMGRQGRRFRWKMRLPGCSSVPLFSMFDSR 60

Query: 61  SHGSFHSSLCQIPFILPHASSFFVPQETMLIATSSRTINFRNPPFPCFDLLVRGFCD-RN 120
           SH SFHSS CQIPFILP+ASSF VPQE +L    SRTI+FRNP FP  DLL RG+CD  N
Sbjct: 61  SHRSFHSSHCQIPFILPYASSFSVPQEKLLTVPPSRTIDFRNPLFPSLDLLARGYCDLNN 120

Query: 121 SHSDSEIECEISEDDDRESDSRANPIEVDRVCKVLDELFALDRNMEAVLDECGVILSHDL 180
           S SDSEIECE SEDDDRE DSR +  EVDRVCKV+DELFALDRNMEAVLDECGV L+HDL
Sbjct: 121 SDSDSEIECEKSEDDDRECDSRVDSTEVDRVCKVIDELFALDRNMEAVLDECGVELTHDL 180

Query: 181 VLNVLERFKQARKPAFRFFCWAAHKPGFSHDSKTYNMMMTILGKTRQFETMVSLLEEMAE 240
           VL VL RFK+ARKPAFRFFCWAA KPGF+HDSKTYNMMMTILG+TRQFETMVSLLEEMAE
Sbjct: 181 VLEVLARFKRARKPAFRFFCWAAQKPGFAHDSKTYNMMMTILGRTRQFETMVSLLEEMAE 240

Query: 241 KELLTMETFTICFKSFAAAKERRKAIGIFELMKKYKYKVGVETINCLLDSLGRAKLGKEA 300
           KELLTMETFTICFK+FAAAKER+KA+G+FELMKKYKYKVGVETINCLLDSLGRAKLGKEA
Sbjct: 241 KELLTMETFTICFKAFAAAKERKKAVGVFELMKKYKYKVGVETINCLLDSLGRAKLGKEA 300

Query: 301 QAVFEKLCGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNLMIDEGFKPDIVAHNTMLEGL 360
             +FEKL GRFTPNLQTYTVLLNGWCRVRNLMEAGKIWN MIDEGFKPDIVAHNTMLEGL
Sbjct: 301 LTIFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEGFKPDIVAHNTMLEGL 360

Query: 361 LRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQNKMKEAVEYFEEMQAAGCRPDT 420
           LRCKKRSDAIKLFEVMK KGPSPDVKSYTILVR+FCKQ KMKEAVEYFEEMQ AGCRPD 
Sbjct: 361 LRCKKRSDAIKLFEVMKTKGPSPDVKSYTILVREFCKQAKMKEAVEYFEEMQGAGCRPDV 420

Query: 421 GIYTCLITGFGNQRRMDMIYGILKEMKTNGCPPDGKTYNSLIKLMTNRRMPDDAGRIYNK 480
            IYTCLITGFGNQ+RMDM+YG+LKEM+ NGCPPDGKTYN+LIKLMTN+RMPDDA RIY K
Sbjct: 421 AIYTCLITGFGNQKRMDMVYGLLKEMRANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKK 480

Query: 481 MIESGIKPTIHTYNMMMKSYFQTRNYEMGVFVWDEMKQKGCCPDDNSYTVFIGGLISHGR 540
           MIE+G +PTIHTY+MMMKSYFQTRNYEMGV  W+EMK+KGCCPDDN YTVFIGGLIS GR
Sbjct: 481 MIENGFEPTIHTYSMMMKSYFQTRNYEMGVAAWNEMKRKGCCPDDNLYTVFIGGLISLGR 540

Query: 541 CSEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKLKFSGKFEASNVIAR 600
           C EAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQK+KFSGKFEAS+VIAR
Sbjct: 541 CVEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMKFSGKFEASSVIAR 600

Query: 601 WAEMMRKRVKRRTPTNIVNADHS 622
           WAEMMRKRVKRR PTN +N DHS
Sbjct: 601 WAEMMRKRVKRRNPTNFINGDHS 623

BLAST of CmoCh12G010310 vs. ExPASy TrEMBL
Match: A0A6J1DUY7 (pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like OS=Momordica charantia OX=3673 GN=LOC111023327 PE=4 SV=1)

HSP 1 Score: 1060.1 bits (2740), Expect = 3.7e-306
Identity = 531/643 (82.58%), Postives = 563/643 (87.56%), Query Frame = 0

Query: 1   MSLSLTFRRFSNFSAF----------PPTISNA------ACQIRRSLGREGRSFRGKMRV 60
           MSLSLT RR SNFSAF             ISNA       C+IRRSLGREGRSF  +MRV
Sbjct: 1   MSLSLTLRRASNFSAFLRSQLKSPGYTARISNAGSSAIHGCRIRRSLGREGRSFGRQMRV 60

Query: 61  PRCSSLPLSRMFDSRSHGSFHSSLCQIPFILPHASSFFVPQETMLIATSSRTINFRNPPF 120
           PRCSSLPLSRMFDS   G F+SS CQIP +LPHASSF VPQE+MLI   SRTIN RNPPF
Sbjct: 61  PRCSSLPLSRMFDSHPPGCFNSSHCQIPSVLPHASSFSVPQESMLIVPKSRTINSRNPPF 120

Query: 121 PCFDLLVRGFC-----DRNSHSDSEIECEISEDDDRESDSRANPIEVDRVCKVLDELFAL 180
           P FDLL RGFC     D + +SDSEIEC  SEDDDRE  SR +  EVDRVCKV+DELFAL
Sbjct: 121 PNFDLLARGFCHLNNEDSDCYSDSEIECGKSEDDDRECGSRVDSTEVDRVCKVIDELFAL 180

Query: 181 DRNMEAVLDECGVILSHDLVLNVLERFKQARKPAFRFFCWAAHKPGFSHDSKTYNMMMTI 240
           DRNMEAVLDE    LSHDLVL VL RFKQARKPAFRFFCWAA KPGF+HDS TYN+MMTI
Sbjct: 181 DRNMEAVLDESSFKLSHDLVLEVLGRFKQARKPAFRFFCWAAQKPGFAHDSTTYNVMMTI 240

Query: 241 LGKTRQFETMVSLLEEMAEKELLTMETFTICFKSFAAAKERRKAIGIFELMKKYKYKVGV 300
           LGKT+QFETMVSLLEEMAEKELLTMETFTICFK+FAAAKER+KA+GIFELMKKYKYKVGV
Sbjct: 241 LGKTKQFETMVSLLEEMAEKELLTMETFTICFKAFAAAKERKKAVGIFELMKKYKYKVGV 300

Query: 301 ETINCLLDSLGRAKLGKEAQAVFEKLCGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNLM 360
           ETINCLLDSLGR KLGKEAQ +FEKL GRFTPNL+TYTVLLNGWCRVRNLMEAGKIWNLM
Sbjct: 301 ETINCLLDSLGREKLGKEAQTLFEKLRGRFTPNLKTYTVLLNGWCRVRNLMEAGKIWNLM 360

Query: 361 IDEGFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQNKM 420
           IDEGFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPDVKSYTIL+RDFCKQ KM
Sbjct: 361 IDEGFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPDVKSYTILIRDFCKQAKM 420

Query: 421 KEAVEYFEEMQAAGCRPDTGIYTCLITGFGNQRRMDMIYGILKEMKTNGCPPDGKTYNSL 480
           KEA+EYF+EMQ AGCR D GIYTCLITGFGNQ+RMDM+YG+LKEMKTN CPPDGK+YN+L
Sbjct: 421 KEAIEYFDEMQGAGCRADAGIYTCLITGFGNQKRMDMVYGLLKEMKTNSCPPDGKSYNAL 480

Query: 481 IKLMTNRRMPDDAGRIYNKMIESGIKPTIHTYNMMMKSYFQTRNYEMGVFVWDEMKQKGC 540
           IKLMT+RRMPDDA RIY KM+ES I+PTIHTYNMMMKSYFQTRNYEMG  +W+EMKQKGC
Sbjct: 481 IKLMTSRRMPDDAVRIYKKMVESSIEPTIHTYNMMMKSYFQTRNYEMGAAIWEEMKQKGC 540

Query: 541 CPDDNSYTVFIGGLISHGRCSEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEE 600
           CPDDNSYTVFIGGLIS GRC EAGKYLEEMIEKGMKAPQLDYNKFAADFSR GRPDILEE
Sbjct: 541 CPDDNSYTVFIGGLISQGRCGEAGKYLEEMIEKGMKAPQLDYNKFAADFSRVGRPDILEE 600

Query: 601 LAQKLKFSGKFEASNVIARWAEMMRKRVKRRTPTNIVNADHSN 623
           LAQK+KFSGKFEASNVIARWAEMMRKRVKRR PTNI N  H +
Sbjct: 601 LAQKMKFSGKFEASNVIARWAEMMRKRVKRRNPTNI-NGGHDH 642

BLAST of CmoCh12G010310 vs. TAIR 10
Match: AT3G62470.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 718.8 bits (1854), Expect = 3.9e-207
Identity = 344/506 (67.98%), Postives = 418/506 (82.61%), Query Frame = 0

Query: 112 RGFCDRNSH----SDSEIECEISEDDDRE---SDSRANPIEVDRVCKVLDELFALDRNME 171
           RGF   +S+     D E+E E   D++      +S  NP EV+RVCKV+DELFALDRNME
Sbjct: 90  RGFSSGSSNVSDGCDEEVESECDNDEETGVSCVESSTNPEEVERVCKVIDELFALDRNME 149

Query: 172 AVLDECGVILSHDLVLNVLERFKQARKPAFRFFCWAAHKPGFSHDSKTYNMMMTILGKTR 231
           AVLDE  + LSHDL++ VLERF+ ARKPAFRFFCWAA + GF+HDS+TYN MM+IL KTR
Sbjct: 150 AVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTR 209

Query: 232 QFETMVSLLEEMAEKELLTMETFTICFKSFAAAKERRKAIGIFELMKKYKYKVGVETINC 291
           QFETMVS+LEEM  K LLTMETFTI  K+FAAAKER+KA+GIFELMKKYK+K+GVETINC
Sbjct: 210 QFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINC 269

Query: 292 LLDSLGRAKLGKEAQAVFEKLCGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNLMIDEGF 351
           LLDSLGRAKLGKEAQ +F+KL  RFTPN+ TYTVLLNGWCRVRNL+EA +IWN MID+G 
Sbjct: 270 LLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGL 329

Query: 352 KPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQNKMKEAVE 411
           KPDIVAHN MLEGLLR +K+SDAIKLF VMK+KGP P+V+SYTI++RDFCKQ+ M+ A+E
Sbjct: 330 KPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIE 389

Query: 412 YFEEMQAAGCRPDTGIYTCLITGFGNQRRMDMIYGILKEMKTNGCPPDGKTYNSLIKLMT 471
           YF++M  +G +PD  +YTCLITGFG Q+++D +Y +LKEM+  G PPDGKTYN+LIKLM 
Sbjct: 390 YFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMA 449

Query: 472 NRRMPDDAGRIYNKMIESGIKPTIHTYNMMMKSYFQTRNYEMGVFVWDEMKQKGCCPDDN 531
           N++MP+ A RIYNKMI++ I+P+IHT+NM+MKSYF  RNYEMG  VW+EM +KG CPDDN
Sbjct: 450 NQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDN 509

Query: 532 SYTVFIGGLISHGRCSEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKL 591
           SYTV I GLI  G+  EA +YLEEM++KGMK P +DYNKFAADF R G+P+I EELAQ+ 
Sbjct: 510 SYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRA 569

Query: 592 KFSGKFEASNVIARWAEMMRKRVKRR 611
           KFSGKF A+ + ARWA+M R+R K+R
Sbjct: 570 KFSGKFAAAEIFARWAQMTRRRFKQR 595

BLAST of CmoCh12G010310 vs. TAIR 10
Match: AT5G14820.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 717.6 bits (1851), Expect = 8.7e-207
Identity = 345/506 (68.18%), Postives = 416/506 (82.21%), Query Frame = 0

Query: 112 RGFCDRNSH----SDSEIECEISEDDDRE---SDSRANPIEVDRVCKVLDELFALDRNME 171
           RGF   +S+     D E+E E   D++      +S  NP EV+RVCKV+DELFALDRNME
Sbjct: 89  RGFSSGSSNVSDGCDEEVESECDNDEETGVSCVESSTNPEEVERVCKVIDELFALDRNME 148

Query: 172 AVLDECGVILSHDLVLNVLERFKQARKPAFRFFCWAAHKPGFSHDSKTYNMMMTILGKTR 231
           AVLDE  + LSHDL++ VLERF+ ARKPAFRFFCWAA + GF+HDS+TYN MM+IL KTR
Sbjct: 149 AVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTR 208

Query: 232 QFETMVSLLEEMAEKELLTMETFTICFKSFAAAKERRKAIGIFELMKKYKYKVGVETINC 291
           QFETMVS+LEEM  K LLTMETFTI  K+FAAAKER+KA+GIFELMKKYK+K+GVETINC
Sbjct: 209 QFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINC 268

Query: 292 LLDSLGRAKLGKEAQAVFEKLCGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNLMIDEGF 351
           LLDSLGRAKLGKEAQ +F+KL  RFTPN+ TYTVLLNGWCRVRNL+EA +IWN MID G 
Sbjct: 269 LLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGL 328

Query: 352 KPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQNKMKEAVE 411
           KPDIVAHN MLEGLLR  K+SDAIKLF VMK+KGP P+V+SYTI++RDFCKQ+ M+ A+E
Sbjct: 329 KPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIE 388

Query: 412 YFEEMQAAGCRPDTGIYTCLITGFGNQRRMDMIYGILKEMKTNGCPPDGKTYNSLIKLMT 471
           YF++M  +G +PD  +YTCLITGFG Q+++D +Y +LKEM+  G PPDGKTYN+LIKLM 
Sbjct: 389 YFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMA 448

Query: 472 NRRMPDDAGRIYNKMIESGIKPTIHTYNMMMKSYFQTRNYEMGVFVWDEMKQKGCCPDDN 531
           N++MP+   RIYNKMI++ I+P+IHT+NM+MKSYF  RNYEMG  VWDEM +KG CPDDN
Sbjct: 449 NQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDN 508

Query: 532 SYTVFIGGLISHGRCSEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKL 591
           SYTV I GLIS G+  EA +YLEEM++KGMK P +DYNKFAADF R G+P+I EELAQ+ 
Sbjct: 509 SYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRA 568

Query: 592 KFSGKFEASNVIARWAEMMRKRVKRR 611
           KFSGKF A+ + ARWA+M R+R K+R
Sbjct: 569 KFSGKFAAAEIFARWAQMTRRRCKQR 594

BLAST of CmoCh12G010310 vs. TAIR 10
Match: AT3G62540.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 714.5 bits (1843), Expect = 7.4e-206
Identity = 344/506 (67.98%), Postives = 415/506 (82.02%), Query Frame = 0

Query: 112 RGFCDRNSH----SDSEIECEISEDDDRE---SDSRANPIEVDRVCKVLDELFALDRNME 171
           RGF   +S+     D E+E E   D++      +S  NP EV+RVCKV+DELFALDRNME
Sbjct: 90  RGFSSGSSNVSDGCDEEVESECDNDEETGVSCVESSTNPEEVERVCKVIDELFALDRNME 149

Query: 172 AVLDECGVILSHDLVLNVLERFKQARKPAFRFFCWAAHKPGFSHDSKTYNMMMTILGKTR 231
           AVLDE  + LSHDL++ VLERF+ ARKPAFRFFCWAA + GF+H S+TYN MM+IL KTR
Sbjct: 150 AVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHASRTYNSMMSILAKTR 209

Query: 232 QFETMVSLLEEMAEKELLTMETFTICFKSFAAAKERRKAIGIFELMKKYKYKVGVETINC 291
           QFETMVS+LEEM  K LLTMETFTI  K+FAAAKER+KA+GIFELMKKYK+K+GVETINC
Sbjct: 210 QFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINC 269

Query: 292 LLDSLGRAKLGKEAQAVFEKLCGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNLMIDEGF 351
           LLDSLGRAKLGKEAQ +F+KL  RFTPN+ TYTVLLNGWCRVRNL+EA +IWN MID G 
Sbjct: 270 LLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGL 329

Query: 352 KPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQNKMKEAVE 411
           KPDIVAHN MLEGLLR  K+SDAIKLF VMK+KGP P+V+SYTI++RDFCKQ+ M+ A+E
Sbjct: 330 KPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIE 389

Query: 412 YFEEMQAAGCRPDTGIYTCLITGFGNQRRMDMIYGILKEMKTNGCPPDGKTYNSLIKLMT 471
           YF++M  +G +PD  +YTCLITGFG Q+++D +Y +LKEM+  G PPDGKTYN+LIKLM 
Sbjct: 390 YFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMA 449

Query: 472 NRRMPDDAGRIYNKMIESGIKPTIHTYNMMMKSYFQTRNYEMGVFVWDEMKQKGCCPDDN 531
           N++MP+   RIYNKMI++ I+P+IHT+NM+MKSYF  RNYEMG  VWDEM +KG CPDDN
Sbjct: 450 NQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDN 509

Query: 532 SYTVFIGGLISHGRCSEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKL 591
           SYTV I GLIS G+  EA +YLEEM++KGMK P +DYNKFAADF R G+P+I EELAQ+ 
Sbjct: 510 SYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRA 569

Query: 592 KFSGKFEASNVIARWAEMMRKRVKRR 611
           KFSGKF A+ + ARWA+M R+R K+R
Sbjct: 570 KFSGKFAAAEIFARWAQMTRRRCKQR 595

BLAST of CmoCh12G010310 vs. TAIR 10
Match: AT1G26500.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 261.9 bits (668), Expect = 1.3e-69
Identity = 167/527 (31.69%), Postives = 275/527 (52.18%), Query Frame = 0

Query: 90  IATSSRTINFRNPPFPCFDLLVRGFCDRNSHSDSEIECEISEDDDRESDSRANPIEVD-- 149
           + TS R IN  N    CF L  R F        +E+           + +   PI  D  
Sbjct: 5   VVTSRRMINIGNSIRRCFILNHRFF-------STEL-----------TPTTITPINQDHL 64

Query: 150 -RVCKVL-DELFALDRNMEAVLDECGVILSHDLVLNVLERFKQARKPAFRFFCWA-AHKP 209
            RVC +L  +  + D  + + L      L+H+  L V   F  + +P  RFF ++  H P
Sbjct: 65  LRVCTILYQQQNSPDSRLVSKLSSTKFQLTHEFFLQVCNNFPLSWRPVHRFFLYSQTHHP 124

Query: 210 GFSHDSKTYNMMMTILGKTRQFETMVSLLEEMAEKELLTMETFTICFKSFAAAKERRKAI 269
            F+H S T N M+ I+G +R  +    L +E+ ++ L+  +TF I  K+ A+A+E +K +
Sbjct: 125 DFTHTSTTSNKMLAIIGNSRNMDLFWELAQEIGKRGLVNDKTFRIVLKTLASARELKKCV 184

Query: 270 GIFELMKKYKYKVGVETINCLLDSLGRAKLGKEAQAVFEKLCGRFTPNLQTYTVLLNGWC 329
             F LM  + Y   VET+N  +++L + KL +EA+ VF KL     P+  TY  ++ G+C
Sbjct: 185 NYFHLMNGFGYLYNVETMNRGVETLCKEKLVEEAKFVFIKLKEFIKPDEITYRTMIQGFC 244

Query: 330 RVRNLMEAGKIWNLMIDEGFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAK-GPSPDV 389
            V +L+EA K+WNLM+DEGF  DI A   ++E LL+  +  +A K+F VM +K G   D 
Sbjct: 245 DVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKVFYVMVSKRGGDLDG 304

Query: 390 KSYTILVRDFCKQNKMKEAVEYFEEMQAAGCRPDTGIYTCLITGFGNQRRMDMIYGILKE 449
             Y +++   CK  ++  A + F+EM+  G   D   +  LI G   +RR+   YG+++ 
Sbjct: 305 GFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIYGLLVKRRVVEAYGLVEG 364

Query: 450 MKTNGCPPDGKTYNSLIKLMTNRRMPDDAGRIYNKMIESGIKPTIHTYNMMMKSYFQTRN 509
           ++     PD   Y+ LIK +   +   +A  ++ KMI+ G +P +HTY M+++ +   R 
Sbjct: 365 VEN----PDISIYHGLIKGLVKIKRASEATEVFRKMIQRGCEPIMHTYLMLLQGHLGRRG 424

Query: 510 YEMGVFVWDEMKQKGCCPDDNSYTVFIGGLISHGRCSEAGKYLEEMIEKGMKAPQLDYNK 569
                       +KG  P  N  T+F+GG+I  G+  E  KY+E  +++G++ P+ DY+K
Sbjct: 425 ------------RKGPDPLVNFDTIFVGGMIKAGKRLETTKYIERTLKRGLEVPRFDYSK 484

Query: 570 FAADFSRAGRPDILEELAQKLKFSGKFEASNVIARWAEMMRKRVKRR 611
           F   +S      + EE+A+KL+    F+ +++  R+ E M  R +RR
Sbjct: 485 FLHYYSNEEGVVMFEEMAKKLREVSLFDLADIFQRYGEKMTTRERRR 497

BLAST of CmoCh12G010310 vs. TAIR 10
Match: AT1G77360.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 258.5 bits (659), Expect = 1.4e-68
Identity = 136/422 (32.23%), Postives = 241/422 (57.11%), Query Frame = 0

Query: 163 MEAVLDECGVILSHDLVLNVLERFKQARKPAFRFFCWAAHKPGFSHDSKTYNMMMTILGK 222
           +++ LD+ G+ +S ++V +VL RF+ A    +RFF W+  +  + H  + Y+MM+    K
Sbjct: 87  LDSALDQSGLRVSQEVVEDVLNRFRNAGLLTYRFFQWSEKQRHYEHSVRAYHMMIESTAK 146

Query: 223 TRQFETMVSLLEEMAEKELLTMETFTICFKSFAAAKERRKAIGIFELMKKYKYKVGVETI 282
            RQ++ M  L+  M +K++L +ETF I  + +A A++  +AI  F +M+KY     +   
Sbjct: 147 IRQYKLMWDLINAMRKKKMLNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAF 206

Query: 283 NCLLDSLGRAKLGKEAQAVFEKLCGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNLMIDE 342
           N LL +L ++K  ++AQ VFE +  RFTP+ +TY++LL GW +  NL +A +++  MID 
Sbjct: 207 NGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDA 266

Query: 343 GFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQNKMKEA 402
           G  PDIV ++ M++ L +  +  +A+ +   M      P    Y++LV  +  +N+++EA
Sbjct: 267 GCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEA 326

Query: 403 VEYFEEMQAAGCRPDTGIYTCLITGFGNQRRMDMIYGILKEMKTNGCPPDGKTYNSLIKL 462
           V+ F EM+ +G + D  ++  LI  F    RM  +Y +LKEMK+ G  P+ K+ N +++ 
Sbjct: 327 VDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRH 386

Query: 463 MTNRRMPDDAGRIYNKMIESGIKPTIHTYNMMMKSYFQTRNYEMGVFVWDEMKQKGCCPD 522
           +  R   D+A  ++ KMI+   +P   TY M++K + + +  E    VW  M++KG  P 
Sbjct: 387 LIERGEKDEAFDVFRKMIKV-CEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPS 446

Query: 523 DNSYTVFIGGLISHGRCSEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQ 582
            ++++V I GL       +A   LEEMIE G++   + + +      +  R D+L+ L +
Sbjct: 447 MHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEEREDVLKFLNE 506

Query: 583 KL 585
           K+
Sbjct: 507 KM 507

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9LZP35.5e-20667.98Pentatricopeptide repeat-containing protein At3g62470, mitochondrial OS=Arabidop... [more]
Q9LEQ71.2e-20568.18Pentatricopeptide repeat-containing protein At5g14820, mitochondrial OS=Arabidop... [more]
Q3EAF81.0e-20467.98Pentatricopeptide repeat-containing protein At3g62540, mitochondrial OS=Arabidop... [more]
Q9FZD41.8e-6831.69Putative pentatricopeptide repeat-containing protein At1g26500 OS=Arabidopsis th... [more]
Q9FVX22.0e-6732.23Pentatricopeptide repeat-containing protein At1g77360, mitochondrial OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A6J1FBQ00.0e+00100.00pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like OS=Cuc... [more]
A0A6J1HPJ90.0e+0097.48pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like OS=Cuc... [more]
A0A5D3BDC83.5e-30984.91Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3BWC04.7e-30984.43pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like OS=Cuc... [more]
A0A6J1DUY73.7e-30682.58pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like OS=Mom... [more]
Match NameE-valueIdentityDescription
AT3G62470.13.9e-20767.98Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G14820.18.7e-20768.18Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G62540.17.4e-20667.98Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G26500.11.3e-6931.69Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G77360.11.4e-6832.23Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 212..239
e-value: 0.0027
score: 17.8
coord: 315..344
e-value: 8.2E-4
score: 19.5
coord: 282..305
e-value: 0.87
score: 10.0
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 525..555
e-value: 0.0014
score: 16.7
coord: 489..522
e-value: 1.8E-9
score: 35.2
coord: 455..487
e-value: 5.9E-7
score: 27.3
coord: 385..418
e-value: 3.2E-8
score: 31.2
coord: 315..348
e-value: 3.0E-7
score: 28.2
coord: 349..383
e-value: 8.5E-5
score: 20.5
coord: 212..239
e-value: 7.0E-5
score: 20.7
coord: 420..452
e-value: 1.8E-6
score: 25.7
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 416..461
e-value: 8.1E-11
score: 42.0
coord: 486..533
e-value: 6.4E-12
score: 45.5
coord: 346..395
e-value: 2.0E-13
score: 50.3
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 382..416
score: 12.802855
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 347..381
score: 10.873667
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 209..243
score: 9.514466
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 487..521
score: 11.531345
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 417..451
score: 10.500983
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 312..346
score: 11.345003
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 522..556
score: 9.689847
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 452..486
score: 11.619036
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 307..444
e-value: 1.6E-37
score: 131.5
coord: 445..630
e-value: 1.5E-33
score: 118.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 145..306
e-value: 1.8E-16
score: 62.5
NoneNo IPR availablePANTHERPTHR47942:SF48OS05G0355200 PROTEINcoord: 38..615
NoneNo IPR availablePANTHERPTHR47942TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATEDcoord: 38..615
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 296..514

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh12G010310.1CmoCh12G010310.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding