CmoCh12G009170 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh12G009170
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	protein CHLOROPLAST IMPORT APPARATUS 2-like
Location	Cmo_Chr12: 8451904 .. 8454580 (+)
RNA-Seq Expression	CmoCh12G009170
Synteny	CmoCh12G009170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATCCAGTAGTCCCTACAAGACTGCAGAAACTCATCCTTGTCTCGTCTTGTGTTTTCTTCCTATTTAGTAATTTCCAGAGAGAGATAGAGAGAGACAGAGAGAGAGAGAGAGACAGAGAGAGAAATTCTTTGTTTCTCACTGCAGAATTGCTATATTTACATCACACCCAAAGGATCTTTCCCTTTTATCTTCTCAACCTCGTGAGTTTCTTCTCTCTTCTTCTTGTTCTTGTTCTTCTTCTCTCTGTTTTTTTGAGGAAATTCAGACTGAATATTAGAAATCAGAGTGTTTGTTTTCTTTATTGGGTTAGTGAATTAGTAGTGTTCTTGTTTGGTGAGAGATTACCCATTTCCATGGAAGTTCGAAATTCCTTGGGTTTTCATGGGGCTAGAGAGAGAGAAACTGGGAAATAAGAAGAGAGAGAGAAGGGGGATTTTGTTTTTTGAAGTTTTGGGGTTTTGGGATTTTGGTTTCTCTTGGATTTTTCCTTTCTTTTTTCCCTTTTTGAGCTGAGGATCTTGTTTTTGTTCTTGTTATTGTTCTTGTTTGGATTTTTCTTAGGTAGGGTTTAAGGGTTTAGAAGAAAACCGACACTCATTTCCTCCAATTTTCCAGGTTTGTGATGGAATTGAGGTGTTTTGGAGTTTCAGGATTTGGGATTTTTCTTTGAAATCTCGAGAAAAACTTTCTTGGTAACCAAACAGAATTTACAGGGTTTGTGTATTTTGTTGCTTTGTTCTAGCTCTCCAATGTCTTCTCCATTCATAAGTGGTGGTGGAAGAGCTTACAATTTCGACCTTGAAATTGTGAAATCTCCATCATCTTCATGGACAAGAACTTCTCAAACTTCATCCCCTTCTTCAACTCTCTCTGAAGCAATTTCAACTCGGAAATCCAGAACTCCCAGAAAACGCCCAAATCAAACCTACAATGAGGCCACAGTTTTGCTATCTACGGCATATCCTAATGTTTTCTCTACCAAGCATCTCACGAATCCACGCAAATTCACTAAATCACACGACTCTCTGTTCTGTGAATCCGCCGAATTGTTGTTGCCTTTCCGAGTAATCGATAGCTCTGGATTTCTCCTAAACCAACCGCTTCTACATGAAAAACCTAATTCCCAAATCCAATCGAAATTGGCGAATCTGTGGGAGAGTCGGCCATGTTCCAGCCCAGGGGAGATCGATTTCCAACCGAATTCAATGGAGATGGAAGATTTCGATGCCGAATCGATTCTCGACGAGGAAGTCGAAGAAGGAATCGATAGTATCATGGGGAATCTGAGTGTGGATAACCTAGAAACAGCTAATTCAGCGCAAGATTGTTCTACCGATAACCCTAAGAATCGGAATTGTTACTGGAATCCAATCGGCTTAGGGTTCAACCAGAAATTCGAATTCGGATTCGGAATGCGGAAGGCAATCGAACGAGCAGCAATCCGACGAGTCGACGACGGAAACTGGTGGCGATTTCCAACAGTCGACGTAGTCGCCATCTCTCCTAAACTAAATCCAAAGCCACCAGCACCAACACCGACCGTCGCCTCAACAAAAAAGAAGAAGAAGAAAGTGGAGAAACTTACAGTGATCGAATCTAAAAAAACCGCACCGCCAAAAGAGAAATCATCAGAGAAACAGACGATTCCGAAATCTAAACCTCCTGGTTTGCTTCTGAAACTGAACTACGAAGCCGTCGCCGACGCTTGGTCCGCCCGAGGATCTCCATTTTCCGACAACAATCCGGGATCCAAATCGGCGGGAAATGATGTAAATGTACGTCTCTCAACCCGCTCCCGTAAATCAAAACCCATAAAACCCTGAAAAAAAAAAAAAAAAAAAGTATATTTTTAGTCTTTATATTTTTCATTAAATATTTTTTAAAATATATTTTATCATTACCCGTCATTAACGAACGGCTCATAAAAAAAACCGTTAATTTAATAACAATAGAAATAATTAAAAATTAGAAAAAAAAAGGGTAATATTGTAAATAGTGAAACTTATTTTTACCGAGGATGGGTTAATTTCAGGTGAAATGACGAAATTATCCTTGTTTATTGGTTTTATATGGAGTAAAATGAACTAAATAGTGAAGGTTATTTTTGGAAATTGGCAGGCCAGGCTGGCGCAGATTGATTTATTTTCGGACGGTGGAGGATTATTGAGAGAAGCCAGTGTATTACGGTACAAGGAGAAAAGGCGGACCCGCTTATTCTCGAAGAAGATTAGATATCAAGTCAAGAAAGTCAACGATGATGTACGGCCCAGATTGAAGGTATGTATGTGACTCCGGAACATCCACCCTCATCTGATTGTTGCCCCTTTTCTTAACTATATATTTATATTATAGCCTCTATTTAATTTTTTCAAAAAAACTTTTTTTTTTAACAAAATATTTATGAATTTGTTAAAATAAATTTTTAATTATTTCGAAAGTAAAATTTTAAAATATATATTGAAATTTAATTAATAAATGTTGCTTACTTTTATTAAAAATAAATTACTCGAACAACCTGAATCAACCACTTTCTTTACTTTGGCAGGGACGGTTTGTGAGAAGACCTAACTCAAGCGCGACCGAAGAGATAGAAAAGTAGGGTTTTAAGGCTCAAAATGTGTGCTTGTCCAACCTCAGTTTTATTATCAAGAAAAGCTTGTCTTACCTCTTATTTTA

mRNA sequence

AATCCAGTAGTCCCTACAAGACTGCAGAAACTCATCCTTGTCTCGTCTTGTGTTTTCTTCCTATTTAGTAATTTCCAGAGAGAGATAGAGAGAGACAGAGAGAGAGAGAGAGACAGAGAGAGAAATTCTTTGTTTCTCACTGCAGAATTGCTATATTTACATCACACCCAAAGGATCTTTCCCTTTTATCTTCTCAACCTCGTGAGTTTCTTCTCTCTTCTTCTTGTTCTTGTTCTTCTTCTCTCTGTTTTTTTGAGGAAATTCAGACTGAATATTAGAAATCAGAGTGTTTGTTTTCTTTATTGGGTTAGTGAATTAGTAGTGTTCTTGTTTGGTGAGAGATTACCCATTTCCATGGAAGTTCGAAATTCCTTGGGTTTTCATGGGGCTAGAGAGAGAGAAACTGGGAAATAAGAAGAGAGAGAGAAGGGGGATTTTGTTTTTTGAAGTTTTGGGGTTTTGGGATTTTGGTTTCTCTTGGATTTTTCCTTTCTTTTTTCCCTTTTTGAGCTGAGGATCTTGTTTTTGTTCTTGTTATTGTTCTTGTTTGGATTTTTCTTAGGTAGGGTTTAAGGGTTTAGAAGAAAACCGACACTCATTTCCTCCAATTTTCCAGGTTTGTGATGGAATTGAGGTGTTTTGGAGTTTCAGGATTTGGGATTTTTCTTTGAAATCTCGAGAAAAACTTTCTTGGTAACCAAACAGAATTTACAGGGTTTGTGTATTTTGTTGCTTTGTTCTAGCTCTCCAATGTCTTCTCCATTCATAAGTGGTGGTGGAAGAGCTTACAATTTCGACCTTGAAATTGTGAAATCTCCATCATCTTCATGGACAAGAACTTCTCAAACTTCATCCCCTTCTTCAACTCTCTCTGAAGCAATTTCAACTCGGAAATCCAGAACTCCCAGAAAACGCCCAAATCAAACCTACAATGAGGCCACAGTTTTGCTATCTACGGCATATCCTAATGTTTTCTCTACCAAGCATCTCACGAATCCACGCAAATTCACTAAATCACACGACTCTCTGTTCTGTGAATCCGCCGAATTGTTGTTGCCTTTCCGAGTAATCGATAGCTCTGGATTTCTCCTAAACCAACCGCTTCTACATGAAAAACCTAATTCCCAAATCCAATCGAAATTGGCGAATCTGTGGGAGAGTCGGCCATGTTCCAGCCCAGGGGAGATCGATTTCCAACCGAATTCAATGGAGATGGAAGATTTCGATGCCGAATCGATTCTCGACGAGGAAGTCGAAGAAGGAATCGATAGTATCATGGGGAATCTGAGTGTGGATAACCTAGAAACAGCTAATTCAGCGCAAGATTGTTCTACCGATAACCCTAAGAATCGGAATTGTTACTGGAATCCAATCGGCTTAGGGTTCAACCAGAAATTCGAATTCGGATTCGGAATGCGGAAGGCAATCGAACGAGCAGCAATCCGACGAGTCGACGACGGAAACTGGTGGCGATTTCCAACAGTCGACGTAGTCGCCATCTCTCCTAAACTAAATCCAAAGCCACCAGCACCAACACCGACCGTCGCCTCAACAAAAAAGAAGAAGAAGAAAGTGGAGAAACTTACAGTGATCGAATCTAAAAAAACCGCACCGCCAAAAGAGAAATCATCAGAGAAACAGACGATTCCGAAATCTAAACCTCCTGGTTTGCTTCTGAAACTGAACTACGAAGCCGTCGCCGACGCTTGGTCCGCCCGAGGATCTCCATTTTCCGACAACAATCCGGGATCCAAATCGGCGGGAAATGATGTAAATGCCAGGCTGGCGCAGATTGATTTATTTTCGGACGGTGGAGGATTATTGAGAGAAGCCAGTGTATTACGGTACAAGGAGAAAAGGCGGACCCGCTTATTCTCGAAGAAGATTAGATATCAAGTCAAGAAAGTCAACGATGATGTACGGCCCAGATTGAAGGGACGGTTTGTGAGAAGACCTAACTCAAGCGCGACCGAAGAGATAGAAAAGTAGGGTTTTAAGGCTCAAAATGTGTGCTTGTCCAACCTCAGTTTTATTATCAAGAAAAGCTTGTCTTACCTCTTATTTTA

Coding sequence (CDS)

ATGTCTTCTCCATTCATAAGTGGTGGTGGAAGAGCTTACAATTTCGACCTTGAAATTGTGAAATCTCCATCATCTTCATGGACAAGAACTTCTCAAACTTCATCCCCTTCTTCAACTCTCTCTGAAGCAATTTCAACTCGGAAATCCAGAACTCCCAGAAAACGCCCAAATCAAACCTACAATGAGGCCACAGTTTTGCTATCTACGGCATATCCTAATGTTTTCTCTACCAAGCATCTCACGAATCCACGCAAATTCACTAAATCACACGACTCTCTGTTCTGTGAATCCGCCGAATTGTTGTTGCCTTTCCGAGTAATCGATAGCTCTGGATTTCTCCTAAACCAACCGCTTCTACATGAAAAACCTAATTCCCAAATCCAATCGAAATTGGCGAATCTGTGGGAGAGTCGGCCATGTTCCAGCCCAGGGGAGATCGATTTCCAACCGAATTCAATGGAGATGGAAGATTTCGATGCCGAATCGATTCTCGACGAGGAAGTCGAAGAAGGAATCGATAGTATCATGGGGAATCTGAGTGTGGATAACCTAGAAACAGCTAATTCAGCGCAAGATTGTTCTACCGATAACCCTAAGAATCGGAATTGTTACTGGAATCCAATCGGCTTAGGGTTCAACCAGAAATTCGAATTCGGATTCGGAATGCGGAAGGCAATCGAACGAGCAGCAATCCGACGAGTCGACGACGGAAACTGGTGGCGATTTCCAACAGTCGACGTAGTCGCCATCTCTCCTAAACTAAATCCAAAGCCACCAGCACCAACACCGACCGTCGCCTCAACAAAAAAGAAGAAGAAGAAAGTGGAGAAACTTACAGTGATCGAATCTAAAAAAACCGCACCGCCAAAAGAGAAATCATCAGAGAAACAGACGATTCCGAAATCTAAACCTCCTGGTTTGCTTCTGAAACTGAACTACGAAGCCGTCGCCGACGCTTGGTCCGCCCGAGGATCTCCATTTTCCGACAACAATCCGGGATCCAAATCGGCGGGAAATGATGTAAATGCCAGGCTGGCGCAGATTGATTTATTTTCGGACGGTGGAGGATTATTGAGAGAAGCCAGTGTATTACGGTACAAGGAGAAAAGGCGGACCCGCTTATTCTCGAAGAAGATTAGATATCAAGTCAAGAAAGTCAACGATGATGTACGGCCCAGATTGAAGGGACGGTTTGTGAGAAGACCTAACTCAAGCGCGACCGAAGAGATAGAAAAGTAG

Protein sequence

MSSPFISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLSEAISTRKSRTPRKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDSLFCESAELLLPFRVIDSSGFLLNQPLLHEKPNSQIQSKLANLWESRPCSSPGEIDFQPNSMEMEDFDAESILDEEVEEGIDSIMGNLSVDNLETANSAQDCSTDNPKNRNCYWNPIGLGFNQKFEFGFGMRKAIERAAIRRVDDGNWWRFPTVDVVAISPKLNPKPPAPTPTVASTKKKKKKVEKLTVIESKKTAPPKEKSSEKQTIPKSKPPGLLLKLNYEAVADAWSARGSPFSDNNPGSKSAGNDVNARLAQIDLFSDGGGLLREASVLRYKEKRRTRLFSKKIRYQVKKVNDDVRPRLKGRFVRRPNSSATEEIEK

Homology

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BLAST of CmoCh12G009170 vs. ExPASy Swiss-Prot
Match: Q9LU68 (Protein CHLOROPLAST IMPORT APPARATUS 2 OS=Arabidopsis thaliana OX=3702 GN=CIA2 PE=1 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 5.6e-66
Identity = 202/453 (44.59%), Postives = 256/453 (56.51%), Query Frame = 0


Query: 1   MSSPFISGGG--RAYNFDLEIVKS-PSSSWTRTSQTSSPSSTLSE------AISTRKSRT 60
           MS+   SGGG   AY+F+LE VKS P SS T T++ +SPSST+SE      AISTRK RT
Sbjct: 1   MSACLSSGGGGAAAYSFELEKVKSPPPSSSTTTTRATSPSSTISESSNSPLAISTRKPRT 60

Query: 61  PRKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDSLFC--------ESAELLLP 120
            RKRPNQTYNEA  LLSTAYPN+FS+ +L++ +K   S +S F         ++++LLLP
Sbjct: 61  QRKRPNQTYNEAATLLSTAYPNIFSS-NLSSKQKTHSSSNSHFYGPLLSDNDDASDLLLP 120

Query: 121 FRVIDSSGFLLNQPLLHEKPNSQIQSKLANLWESRPCSSPGEIDFQPNSMEMEDFDAESI 180
           +  I+   FL + P +  K       K  N      C   GEI+    S   ++FDAESI
Sbjct: 121 YESIEEPDFLFH-PTIQTKTEFFSDQKEVN--SGGDCYG-GEIEKFDFS---DEFDAESI 180

Query: 181 LDEEVEEGIDSIMGNLSVDNLETA-----------NSAQDCSTDNPKNRNCY----WNPI 240
           LDE++EEGIDSIMG +   N  +               +  S    K         WN  
Sbjct: 181 LDEDIEEGIDSIMGTVVESNSNSGIYESRVPGMINRGGRSSSNRIGKLEQMMMINSWNRS 240

Query: 241 GLGFNQKFEFGFGMRKAIERAAIRRVDDGNWWRFPTVDVVAISPKLNPKPPAPTPTVAST 300
             GFN  F  G G+     R+A+R  DD   W+  TVD   ISP++       T T  ST
Sbjct: 241 SNGFN--FPLGLGL-----RSALRENDDTKLWKIHTVDFEQISPRIQ---TVKTETAIST 300

Query: 301 KKKKKKVEKLTVIESKKTAPPKEKSSEKQTIPKS----------------KPPGLLLKLN 360
             ++K   K  VI  +K+   K+K  +K T+  +                K  G LLKL+
Sbjct: 301 VDEEKSDGKKVVISGEKS--NKKKKKKKMTVTTTLITESKSLEDTEETSLKRTGPLLKLD 360

Query: 361 YEAVADAWSARGSPFSDNNPGSKSAGNDVNARLAQIDLFSDGGGLLREASVLRYKEKRRT 406
           Y+ V +AWS + SPF D   GS++   DVNARLAQIDLF D G  +REASVLRYKEKRRT
Sbjct: 361 YDGVLEAWSDKTSPFPDEIQGSEAV--DVNARLAQIDLFGDSG--MREASVLRYKEKRRT 420

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BLAST of CmoCh12G009170 vs. ExPASy Swiss-Prot
Match: Q8RWD0 (Zinc finger protein CONSTANS-LIKE 16 OS=Arabidopsis thaliana OX=3702 GN=COL16 PE=1 SV=2)

HSP 1 Score: 77.8 bits (190), Expect = 3.2e-13
Identity = 56/155 (36.13%), Postives = 80/155 (51.61%), Query Frame = 0


Query: 271 KKKKVEKLTVIESKKTAPPKEKSSEKQTIPKSKPPGLLLKLNYEAVADAWSARGSPFSDN 330
           K  + E +  +ES      K K  E + +       L+L+LNY++V   W  +G P+S  
Sbjct: 264 KTSEEEVMKNVESSGECVVKVKEEEHKNV-------LMLRLNYDSVISTWGGQGPPWSSG 323

Query: 331 NPGSK--------------SAGNDVNAR-----LAQIDLFSDGGGLLREASVLRYKEKRR 390
            P  +              + G   + +           F DGG   REA V RY+EKRR
Sbjct: 324 EPPERDMDISGWPAFSMVENGGESTHQKQYVGGCLPSSGFGDGG---REARVSRYREKRR 383

Query: 391 TRLFSKKIRYQVKKVNDDVRPRLKGRFVRRPNSSA 407
           TRLFSKKIRY+V+K+N + RPR+KGRFV+R + +A
Sbjct: 384 TRLFSKKIRYEVRKLNAEKRPRMKGRFVKRASLAA 408

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BLAST of CmoCh12G009170 vs. ExPASy Swiss-Prot
Match: Q9C9A9 (Zinc finger protein CONSTANS-LIKE 7 OS=Arabidopsis thaliana OX=3702 GN=COL7 PE=2 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 4.6e-12
Identity = 61/147 (41.50%), Postives = 77/147 (52.38%), Query Frame = 0


Query: 271 KKKKVEKLTVIESKKTAPPKEKSSEKQTIPKSKPPGLLLKLNYEAVADAWSARGSPFSDN 330
           K+ K E     E+K      + S  + +  K +   L L+L+Y AV  AW   GSP+   
Sbjct: 241 KRVKDEDEEEEEAKCENGGSKDSDREASNDKDRKTSLFLRLDYGAVISAWDNHGSPWKTG 300

Query: 331 -NPGSKSAGNDV-------NARLAQID------LFSDGGGL--LREASVLRYKEKRRTRL 390
             P     GN           +L   D         DGGG    REA VLRYKEKRRTRL
Sbjct: 301 IKPECMLGGNTCLPHVVGGYEKLMSSDGSVTRQQGRDGGGSDGEREARVLRYKEKRRTRL 360

Query: 391 FSKKIRYQVKKVNDDVRPRLKGRFVRR 402
           FSKKIRY+V+K+N + RPR+KGRFV+R
Sbjct: 361 FSKKIRYEVRKLNAEQRPRIKGRFVKR 387

[Close]

BLAST of CmoCh12G009170 vs. ExPASy Swiss-Prot
Match: Q9M9B3 (Zinc finger protein CONSTANS-LIKE 8 OS=Arabidopsis thaliana OX=3702 GN=COL8 PE=1 SV=2)

HSP 1 Score: 70.9 bits (172), Expect = 3.9e-11
Identity = 43/92 (46.74%), Postives = 54/92 (58.70%), Query Frame = 0


Query: 310 KLNYEAVADAWSARGSPFSDNNPGSKSAGNDVNARLAQIDLFSDGGGLLREASVLRYKEK 369
           +LNYE V  AW  + SP    N       N  + +L    +        REA V RY++K
Sbjct: 229 RLNYENVIAAWDKQESPRDVKN-------NTSSFQLVPPGIEEKRVRSEREARVWRYRDK 288

Query: 370 RRTRLFSKKIRYQVKKVNDDVRPRLKGRFVRR 402
           R+ RLF KKIRY+V+KVN D RPR+KGRFVRR
Sbjct: 289 RKNRLFEKKIRYEVRKVNADKRPRMKGRFVRR 313

[Close]

BLAST of CmoCh12G009170 vs. ExPASy Swiss-Prot
Match: Q8LG76 (Zinc finger protein CONSTANS-LIKE 6 OS=Arabidopsis thaliana OX=3702 GN=COL6 PE=2 SV=2)

HSP 1 Score: 67.0 bits (162), Expect = 5.6e-10
Identity = 94/355 (26.48%), Postives = 148/355 (41.69%), Query Frame = 0


Query: 77  TKHLTNPRKFTKSHDSLFCESAELLLPFRVID--SSGFLLNQPLLHEKP--NSQIQSKLA 136
           T+    PR   KSH  +F +    L+P    +  +  + + + L+ E P  NS ++ +  
Sbjct: 83  TRKARTPRGGKKSHTMVFHD----LVPEMSTEDQAESYEVEEQLIFEVPVMNSMVEEQCF 142

Query: 137 NLWESRPCSSPGEIDFQPNSMEMEDFDAESILDEEVEEGIDSIMGNLSVDNLETANSAQD 196
           N    +      E    P S +          DEE ++  +S +  L   ++E A    D
Sbjct: 143 N----QSLEKQNEFPMMPLSFKSS--------DEEDDDNAESCLNGLFPTDMELAQFTAD 202

Query: 197 CSTDNPKNRNCYWNPIGLG---FNQKFEFGFGMRKAIERAAI-------RRVDDGNWWRF 256
             T            +G G   F+   E G G    IE+  +       R V D +    
Sbjct: 203 VET-----------LLGGGDREFHSIEELGLGEMLKIEKEEVEEEGVVTREVHDQDEGDE 262

Query: 257 PTVDVVAISPKLNPKPPAPTPTVASTKKKKKKVEKLTVIESKKTAPPKEKSSEKQTIPKS 316
            +   ++   +   K         +T  + ++ EK  V+++       E S   +   K 
Sbjct: 263 TSPFEISFDYEYTHK---------TTFDEGEEDEKEDVMKNVMEMGVNEMSGGIKEEKKE 322

Query: 317 KPPGLLLKLNYEAVADAWSARGSPFSDNNP---------------GSKSAGNDVNARLAQ 376
           K   L+L+L+YE+V   W  +G P++   P               G   A    +     
Sbjct: 323 K--ALMLRLDYESVISTWGGQGIPWTARVPSEIDLDMVCFPTHTMGESGAEAHHHNHFRG 382

Query: 377 IDL-FSDGGGLLREASVLRYKEKRRTRLFSKKIRYQVKKVNDDVRPRLKGRFVRR 402
           + L   D G   REA V RY+EKRRTRLFSKKIRY+V+K+N + RPR+KGRFV+R
Sbjct: 383 LGLHLGDAGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKR 399

[Close]

BLAST of CmoCh12G009170 vs. ExPASy TrEMBL
Match: A0A6J1FBD7 (protein CHLOROPLAST IMPORT APPARATUS 2-like OS=Cucurbita moschata OX=3662 GN=LOC111444083 PE=4 SV=1)

HSP 1 Score: 799.7 bits (2064), Expect = 5.9e-228
Identity = 412/412 (100.00%), Postives = 412/412 (100.00%), Query Frame = 0


Query: 1   MSSPFISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLSEAISTRKSRTPRKRPNQTY 60
           MSSPFISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLSEAISTRKSRTPRKRPNQTY
Sbjct: 1   MSSPFISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLSEAISTRKSRTPRKRPNQTY 60

Query: 61  NEATVLLSTAYPNVFSTKHLTNPRKFTKSHDSLFCESAELLLPFRVIDSSGFLLNQPLLH 120
           NEATVLLSTAYPNVFSTKHLTNPRKFTKSHDSLFCESAELLLPFRVIDSSGFLLNQPLLH
Sbjct: 61  NEATVLLSTAYPNVFSTKHLTNPRKFTKSHDSLFCESAELLLPFRVIDSSGFLLNQPLLH 120

Query: 121 EKPNSQIQSKLANLWESRPCSSPGEIDFQPNSMEMEDFDAESILDEEVEEGIDSIMGNLS 180
           EKPNSQIQSKLANLWESRPCSSPGEIDFQPNSMEMEDFDAESILDEEVEEGIDSIMGNLS
Sbjct: 121 EKPNSQIQSKLANLWESRPCSSPGEIDFQPNSMEMEDFDAESILDEEVEEGIDSIMGNLS 180

Query: 181 VDNLETANSAQDCSTDNPKNRNCYWNPIGLGFNQKFEFGFGMRKAIERAAIRRVDDGNWW 240
           VDNLETANSAQDCSTDNPKNRNCYWNPIGLGFNQKFEFGFGMRKAIERAAIRRVDDGNWW
Sbjct: 181 VDNLETANSAQDCSTDNPKNRNCYWNPIGLGFNQKFEFGFGMRKAIERAAIRRVDDGNWW 240

Query: 241 RFPTVDVVAISPKLNPKPPAPTPTVASTKKKKKKVEKLTVIESKKTAPPKEKSSEKQTIP 300
           RFPTVDVVAISPKLNPKPPAPTPTVASTKKKKKKVEKLTVIESKKTAPPKEKSSEKQTIP
Sbjct: 241 RFPTVDVVAISPKLNPKPPAPTPTVASTKKKKKKVEKLTVIESKKTAPPKEKSSEKQTIP 300

Query: 301 KSKPPGLLLKLNYEAVADAWSARGSPFSDNNPGSKSAGNDVNARLAQIDLFSDGGGLLRE 360
           KSKPPGLLLKLNYEAVADAWSARGSPFSDNNPGSKSAGNDVNARLAQIDLFSDGGGLLRE
Sbjct: 301 KSKPPGLLLKLNYEAVADAWSARGSPFSDNNPGSKSAGNDVNARLAQIDLFSDGGGLLRE 360

Query: 361 ASVLRYKEKRRTRLFSKKIRYQVKKVNDDVRPRLKGRFVRRPNSSATEEIEK 413
           ASVLRYKEKRRTRLFSKKIRYQVKKVNDDVRPRLKGRFVRRPNSSATEEIEK
Sbjct: 361 ASVLRYKEKRRTRLFSKKIRYQVKKVNDDVRPRLKGRFVRRPNSSATEEIEK 412

[Close]

BLAST of CmoCh12G009170 vs. ExPASy TrEMBL
Match: A0A6J1HLT7 (protein CHLOROPLAST IMPORT APPARATUS 2-like OS=Cucurbita maxima OX=3661 GN=LOC111465375 PE=4 SV=1)

HSP 1 Score: 768.5 bits (1983), Expect = 1.5e-218
Identity = 400/413 (96.85%), Postives = 405/413 (98.06%), Query Frame = 0


Query: 1   MSSPFISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLSEAISTRKSRTPRKRPNQTY 60
           MSSPFISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLSEAISTRKSRTPRKRPNQTY
Sbjct: 1   MSSPFISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLSEAISTRKSRTPRKRPNQTY 60

Query: 61  NEATVLLSTAYPNVFSTKHLTNPRKFTKSHDSLFCESAELLLPFRVIDSSGFLLNQPLLH 120
           NEATVLLSTAYPNVFSTKHLTNPRKFTKS DSLFCESAELLLPFRVI+SSGFLLNQPLLH
Sbjct: 61  NEATVLLSTAYPNVFSTKHLTNPRKFTKSPDSLFCESAELLLPFRVIESSGFLLNQPLLH 120

Query: 121 EKPNSQIQSKLANLWESRPCSSPGEIDFQPNSMEMEDFDAESILDEEVEEGIDSIMGNLS 180
           EKPNSQIQSKLANLWESRPCSSPGEIDFQPNSMEMEDFDAESILDEEVEEGIDSIMGNLS
Sbjct: 121 EKPNSQIQSKLANLWESRPCSSPGEIDFQPNSMEMEDFDAESILDEEVEEGIDSIMGNLS 180

Query: 181 VDNLETANSAQDCSTDNPKNRNCYWNPIGLGFNQKFEFGFGMRKAIERAAIRRVDDGNWW 240
           VDNLET NSAQDCS+DNPKN NCYWNPIGLGFNQKFEFGFGMRKAIERAAIRRVDDGNWW
Sbjct: 181 VDNLETPNSAQDCSSDNPKNWNCYWNPIGLGFNQKFEFGFGMRKAIERAAIRRVDDGNWW 240

Query: 241 RFPTVDVVAISPKLNPKPPAPTPTVAST-KKKKKKVEKLTVIESKKTAPPKEKSSEKQTI 300
           RFPTVDVV ISPKLNPKPPAPTPTVAST KKKKKKVEKLTVIESKKTAPPKEKSSEK TI
Sbjct: 241 RFPTVDVVDISPKLNPKPPAPTPTVASTKKKKKKKVEKLTVIESKKTAPPKEKSSEKPTI 300

Query: 301 PKSKPPGLLLKLNYEAVADAWSARGSPFSDNNPGSKSAGNDVNARLAQIDLFSDGGGLLR 360
           PKSKPPGLLLKLNYEAVADAWSARGSPF+DN+ GSKSAGNDVNARLAQIDLFSDGGGLLR
Sbjct: 301 PKSKPPGLLLKLNYEAVADAWSARGSPFTDNHMGSKSAGNDVNARLAQIDLFSDGGGLLR 360

Query: 361 EASVLRYKEKRRTRLFSKKIRYQVKKVNDDVRPRLKGRFVRRPNSSATEEIEK 413
           EASVLRYKEKRRTRL SKKIRYQVKKVNDD+RPRLKGRFVRRPNSSATEEIEK
Sbjct: 361 EASVLRYKEKRRTRLLSKKIRYQVKKVNDDLRPRLKGRFVRRPNSSATEEIEK 413

[Close]

BLAST of CmoCh12G009170 vs. ExPASy TrEMBL
Match: A0A6J1D908 (protein CHLOROPLAST IMPORT APPARATUS 2 OS=Momordica charantia OX=3673 GN=LOC111018157 PE=4 SV=1)

HSP 1 Score: 645.2 bits (1663), Expect = 1.9e-181
Identity = 351/424 (82.78%), Postives = 372/424 (87.74%), Query Frame = 0


Query: 1   MSSPFISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLSE------AISTRKSRTPRK 60
           MSSP ISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLSE      AISTRKSRTPRK
Sbjct: 1   MSSPCISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLSESSNTQLAISTRKSRTPRK 60

Query: 61  RPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDSLFCESAELLLPFRVIDSSGFLL 120
           RPNQTYNEATVLLST YPNVFSTKHLTNPRKFTK HDSLFCESAELLLPFRVIDSSGFLL
Sbjct: 61  RPNQTYNEATVLLSTVYPNVFSTKHLTNPRKFTKPHDSLFCESAELLLPFRVIDSSGFLL 120

Query: 121 NQPLLHEKPNSQIQSKLANLWESRPCSSPGEIDFQPNSMEM-------EDFDAESILDEE 180
           +QPLL EKPNSQIQ+KLANLWE RPCSSPGEIDFQPNSME+       +DFDAESILDEE
Sbjct: 121 HQPLLQEKPNSQIQTKLANLWEGRPCSSPGEIDFQPNSMEIDGGCGQDDDFDAESILDEE 180

Query: 181 VEEGIDSIMGNLSVDNLETANSAQDCSTDNPKNRNCYWN--PIGLGFNQKFEFGFGMRKA 240
           +EEGIDSIMGNLSVDNLETANS QD S  NP+N NCYWN  PIGLG NQKFEFGFGM+KA
Sbjct: 181 IEEGIDSIMGNLSVDNLETANSPQDYSCTNPRNWNCYWNNPPIGLGLNQKFEFGFGMQKA 240

Query: 241 IERAAIRRVDDGNWWRFPTVDVVAISPKLNPKPPAPTPTVASTKKKKKKVEKLTVIESKK 300
            ERAAIR+V+DGNWWRFPTVDVV ISPKLN KPPA  P   STKKKKKK+EKLTVIE+KK
Sbjct: 241 TERAAIRQVEDGNWWRFPTVDVVEISPKLN-KPPA--PAAVSTKKKKKKMEKLTVIETKK 300

Query: 301 TAPPKEKSSEKQTIPKSKPPGLLLKLNYEAVADAWSARGSPFSDNNPGSKSAGNDVNARL 360
            A   +K  +++  PKSK PGLLLKLNYEAVADAWS RGSPFSD  PGS +AGNDVN RL
Sbjct: 301 AATIPQK--DQKPTPKSK-PGLLLKLNYEAVADAWSDRGSPFSDEIPGSDTAGNDVNTRL 360

Query: 361 AQIDLFSDGGGLLREASVLRYKEKRRTRLFSKKIRYQVKKVNDDVRPRLKGRFVRRPNSS 410
           AQ+DLF D GGLLREASVLRYKEKRRTRLFSKKIRYQV+KVN D RPR+KGRFVRRPNSS
Sbjct: 361 AQVDLFLDSGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADERPRMKGRFVRRPNSS 418

[Close]

BLAST of CmoCh12G009170 vs. ExPASy TrEMBL
Match: A0A0A0LGV4 (CCT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G061540 PE=4 SV=1)

HSP 1 Score: 636.3 bits (1640), Expect = 8.6e-179
Identity = 346/428 (80.84%), Postives = 364/428 (85.05%), Query Frame = 0


Query: 1   MSSPFISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLSE--------AISTRKSRTP 60
           MSSP ISGGGRAYNFDLEI+KSPSSSWTRTSQTSSPSSTLSE        AISTRK RTP
Sbjct: 1   MSSPCISGGGRAYNFDLEILKSPSSSWTRTSQTSSPSSTLSESSNNTTQLAISTRKLRTP 60

Query: 61  RKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHD---SLFCESAELLLPFRVIDS 120
           RKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHD   SLFCESAELLLPFRVIDS
Sbjct: 61  RKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDDSSSLFCESAELLLPFRVIDS 120

Query: 121 SGFLLNQPLLHEKPNSQIQSKLANLWESRPCSSPGEIDFQPNSM---EMEDFDAESILDE 180
           SGFLL+QPLL EKPNSQI SKL NLWE+RPCSSPGEIDFQPNSM   E+EDFDAESILDE
Sbjct: 121 SGFLLHQPLLEEKPNSQIHSKLTNLWENRPCSSPGEIDFQPNSMEIEEIEDFDAESILDE 180

Query: 181 EVEEGIDSIMGNLSVDNLETANSAQD-CSTDNPKNRNCYWNPIGLGFNQKFEFGFGMRKA 240
           E+EEGIDSIMGNLSVDNLE  NS QD C   N   RN  WNPIGLGFNQKFE GFG RK 
Sbjct: 181 EIEEGIDSIMGNLSVDNLEKGNSTQDSCVNANNHPRNWNWNPIGLGFNQKFESGFGFRKG 240

Query: 241 IERAAIRRVDDGNWWRFPTVDVVAISPKLNPKPPA--------PTPTVASTKKKKKKVEK 300
           IER AIR VD+GNWWRFPTVDV+ ISPKLNPKPPA        PTP   STKKKKKKVEK
Sbjct: 241 IERTAIRGVDNGNWWRFPTVDVIEISPKLNPKPPAPAPTPTPTPTPAAVSTKKKKKKVEK 300

Query: 301 LTVIESKKTAPPKEKSSEKQTIPKSKPPGLLLKLNYEAVADAWSARGSPFSDNNPGSKSA 360
           LTVIESKK A P +K   ++ IPK KP GLLLKLNYEAVADAWS+RGSPFSD  P S +A
Sbjct: 301 LTVIESKKAAIPLQKEKSEKPIPKLKPTGLLLKLNYEAVADAWSSRGSPFSDEIPSSDTA 360

Query: 361 GNDVNARLAQIDLFSDGGGLLREASVLRYKEKRRTRLFSKKIRYQVKKVNDDVRPRLKGR 406
           G+DVNAR+A IDLF++GGGLLREASVLRYKEKRRTRLFSKKIRYQV+KVN D RPR+KGR
Sbjct: 361 GSDVNARVANIDLFTEGGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADGRPRMKGR 420

[Close]

BLAST of CmoCh12G009170 vs. ExPASy TrEMBL
Match: A0A1S3BQX8 (protein CHLOROPLAST IMPORT APPARATUS 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492569 PE=4 SV=1)

HSP 1 Score: 636.0 bits (1639), Expect = 1.1e-178
Identity = 351/431 (81.44%), Postives = 367/431 (85.15%), Query Frame = 0


Query: 1   MSSPFISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLSE--------AISTRKSRTP 60
           MSSP ISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLSE        AISTRK RTP
Sbjct: 1   MSSPCISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLSESSNNTTQLAISTRKLRTP 60

Query: 61  RKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHD---SLFCESAELLLPFRVIDS 120
           RKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHD   SLFCESAELLLPFRVIDS
Sbjct: 61  RKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDDSSSLFCESAELLLPFRVIDS 120

Query: 121 SGFLLNQPLLHEKPNSQIQSKLANLWESRPCSSPGEIDFQPNSM---EMEDFDAESILDE 180
           SGFLL+QPLL EKPNSQI SKL NLWE+RPCSSPGEIDFQPNSM   E+EDFDAESILDE
Sbjct: 121 SGFLLHQPLLEEKPNSQIHSKLTNLWENRPCSSPGEIDFQPNSMEIEEIEDFDAESILDE 180

Query: 181 EVEEGIDSIMGNLSVDNLETANSAQD-CSTDNPKNRNCYWNPIGLGFNQKFEFGFGMRKA 240
           E+EEGIDSIMGNLSVDNLE  NS QD C   N   RN  WNPIGLGFNQKFE GFG RK 
Sbjct: 181 EIEEGIDSIMGNLSVDNLENGNSTQDSCVNANNHQRNWNWNPIGLGFNQKFESGFGFRKG 240

Query: 241 IERAAIRRVDDGNWWRFPTVDVVAISPKLNPKPPA--------PTPTVASTKKKKKKVEK 300
           IER AIR VD+GNWWRFPTVDV+ ISPKLNPKPPA        PTP   STKKKKKKVEK
Sbjct: 241 IERTAIRGVDNGNWWRFPTVDVIEISPKLNPKPPAPAPAPTPTPTPAAVSTKKKKKKVEK 300

Query: 301 LTVIESKKTAPP--KEKSSE-KQTIPKSKPPGLLLKLNYEAVADAWSARGSPFSDNNPGS 360
           LTVIESKK A P  KEKS + ++ IPK KP GLLLKLNYEAVADAWS+RGSPFSD  P S
Sbjct: 301 LTVIESKKAAIPLQKEKSEKSEKPIPKLKPAGLLLKLNYEAVADAWSSRGSPFSDEIPSS 360

Query: 361 KSAGNDVNARLAQIDLFSDGGGLLREASVLRYKEKRRTRLFSKKIRYQVKKVNDDVRPRL 406
            +AG+DVNARLA IDLF++GGGLLREASVLRYKEKRRTRLFSKKIRYQV+KVN D RPR+
Sbjct: 361 DTAGSDVNARLANIDLFTEGGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADGRPRM 420

[Close]

BLAST of CmoCh12G009170 vs. TAIR 10
Match: AT5G57180.2 (chloroplast import apparatus 2 )

HSP 1 Score: 253.1 bits (645), Expect = 3.9e-67
Identity = 202/453 (44.59%), Postives = 256/453 (56.51%), Query Frame = 0


Query: 1   MSSPFISGGG--RAYNFDLEIVKS-PSSSWTRTSQTSSPSSTLSE------AISTRKSRT 60
           MS+   SGGG   AY+F+LE VKS P SS T T++ +SPSST+SE      AISTRK RT
Sbjct: 1   MSACLSSGGGGAAAYSFELEKVKSPPPSSSTTTTRATSPSSTISESSNSPLAISTRKPRT 60

Query: 61  PRKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDSLFC--------ESAELLLP 120
            RKRPNQTYNEA  LLSTAYPN+FS+ +L++ +K   S +S F         ++++LLLP
Sbjct: 61  QRKRPNQTYNEAATLLSTAYPNIFSS-NLSSKQKTHSSSNSHFYGPLLSDNDDASDLLLP 120

Query: 121 FRVIDSSGFLLNQPLLHEKPNSQIQSKLANLWESRPCSSPGEIDFQPNSMEMEDFDAESI 180
           +  I+   FL + P +  K       K  N      C   GEI+    S   ++FDAESI
Sbjct: 121 YESIEEPDFLFH-PTIQTKTEFFSDQKEVN--SGGDCYG-GEIEKFDFS---DEFDAESI 180

Query: 181 LDEEVEEGIDSIMGNLSVDNLETA-----------NSAQDCSTDNPKNRNCY----WNPI 240
           LDE++EEGIDSIMG +   N  +               +  S    K         WN  
Sbjct: 181 LDEDIEEGIDSIMGTVVESNSNSGIYESRVPGMINRGGRSSSNRIGKLEQMMMINSWNRS 240

Query: 241 GLGFNQKFEFGFGMRKAIERAAIRRVDDGNWWRFPTVDVVAISPKLNPKPPAPTPTVAST 300
             GFN  F  G G+     R+A+R  DD   W+  TVD   ISP++       T T  ST
Sbjct: 241 SNGFN--FPLGLGL-----RSALRENDDTKLWKIHTVDFEQISPRIQ---TVKTETAIST 300

Query: 301 KKKKKKVEKLTVIESKKTAPPKEKSSEKQTIPKS----------------KPPGLLLKLN 360
             ++K   K  VI  +K+   K+K  +K T+  +                K  G LLKL+
Sbjct: 301 VDEEKSDGKKVVISGEKS--NKKKKKKKMTVTTTLITESKSLEDTEETSLKRTGPLLKLD 360

Query: 361 YEAVADAWSARGSPFSDNNPGSKSAGNDVNARLAQIDLFSDGGGLLREASVLRYKEKRRT 406
           Y+ V +AWS + SPF D   GS++   DVNARLAQIDLF D G  +REASVLRYKEKRRT
Sbjct: 361 YDGVLEAWSDKTSPFPDEIQGSEAV--DVNARLAQIDLFGDSG--MREASVLRYKEKRRT 420

[Close]

BLAST of CmoCh12G009170 vs. TAIR 10
Match: AT4G25990.1 (CCT motif family protein )

HSP 1 Score: 248.1 bits (632), Expect = 1.3e-65
Identity = 179/422 (42.42%), Postives = 240/422 (56.87%), Query Frame = 0


Query: 12  AYNFDLEIVKSPSSSWTRTSQTSSPSSTLSE------AISTRKSRTPRKRPNQTYNEATV 71
           AY+F+LE++KSP S     + T SPSST+SE      +ISTR+ RTPRKRPNQTY+EA  
Sbjct: 5   AYSFELEMMKSPPS-----NNTPSPSSTISETNSPPFSISTRRPRTPRKRPNQTYDEAAA 64

Query: 72  LLSTAYPNVFSTKHL-TNPRKFTKSHDSLFCESAELLLPFRVIDSSGFLLNQPLLHEKPN 131
           LLSTAYP +FS+K   T      KS  S + E+++LLLP+  I+ + FL          N
Sbjct: 65  LLSTAYPKIFSSKKAKTQIFGTNKSPLSDYDEASQLLLPYVSIEENEFLF---------N 124

Query: 132 SQIQSKLANLWESRPCSSPGEIDFQPNSM-EMEDFDAESILDEEVEEGIDSIMGNLSVDN 191
             I +K  +  E +  S     D + N    ++DFDAESILDEE+EEGIDS MGN+    
Sbjct: 125 PTIPTKTEHFLEQKEVSFD---DLEVNGFGVLDDFDAESILDEEIEEGIDSFMGNI---- 184

Query: 192 LETANSAQDCSTDNPKNRNCY-----WNPIGLGFNQKFEFGFGMRKAIERAAIRRVDDGN 251
                      +++    NCY        +   +N +F  G G+     R+++R+ +D N
Sbjct: 185 ----------ESNDGDRENCYRVGRLEEIMKNAWNGRFRLGLGL-----RSSLRQNNDEN 244

Query: 252 WWRFPTVDVVAISPKLNPKPPAPTP----------------TVASTKKKKKKVEKLTVIE 311
           WW+FPTV+   ISP++     A                   T    KKKKKK +K  V  
Sbjct: 245 WWKFPTVEFDQISPRIQTTAAAAADDGQSNVVDSSKIKTIVTAEGDKKKKKKKKKKKVAP 304

Query: 312 SKKTAPPKEKSSEKQTIPKSKPPGLLLKLNYEAVADAWSARGSPFSDNNPGSKSAGNDVN 371
           +   +   E +     + +   P  LLKL+Y+ V +AWS + SPFSD   GS + G D +
Sbjct: 305 AAAESKSSEVTDSNPKLEQRVSP--LLKLDYDGVLEAWSGKESPFSDEILGSDADGVDFH 364

Query: 372 ARLAQIDLFSDGGGLLREASVLRYKEKRRTRLFSKKIRYQVKKVNDDVRPRLKGRFVRRP 405
            RL +IDLF + G  +REASVLRYKEKRR RLFSKKIRYQV+K+N D RPR+KGRFVRRP
Sbjct: 365 VRLGEIDLFGESG--MREASVLRYKEKRRNRLFSKKIRYQVRKLNADQRPRMKGRFVRRP 386

[Close]

BLAST of CmoCh12G009170 vs. TAIR 10
Match: AT4G25990.2 (CCT motif family protein )

HSP 1 Score: 238.0 bits (606), Expect = 1.3e-62
Identity = 179/437 (40.96%), Postives = 240/437 (54.92%), Query Frame = 0


Query: 12  AYNFDLEIVKSPSSSWTRTSQTSSPSSTLSE------AISTRKSRTPRKRPNQTYNEATV 71
           AY+F+LE++KSP S     + T SPSST+SE      +ISTR+ RTPRKRPNQTY+EA  
Sbjct: 5   AYSFELEMMKSPPS-----NNTPSPSSTISETNSPPFSISTRRPRTPRKRPNQTYDEAAA 64

Query: 72  LLSTAYPNVFSTKHL-TNPRKFTKSHDSLFCESAELLLPFRVIDSSGFLLNQPLLHEKPN 131
           LLSTAYP +FS+K   T      KS  S + E+++LLLP+  I+ + FL          N
Sbjct: 65  LLSTAYPKIFSSKKAKTQIFGTNKSPLSDYDEASQLLLPYVSIEENEFLF---------N 124

Query: 132 SQIQSKLANLWESRPCSSPGEIDFQPNSM-EMEDFDAESILDEEVEEGIDSIMGNLSVDN 191
             I +K  +  E +  S     D + N    ++DFDAESILDEE+EEGIDS MGN+    
Sbjct: 125 PTIPTKTEHFLEQKEVSFD---DLEVNGFGVLDDFDAESILDEEIEEGIDSFMGNI---- 184

Query: 192 LETANSAQDCSTDNPKNRNCY-----WNPIGLGFNQKFEFGFGMRKAIERAAIRRVDDGN 251
                      +++    NCY        +   +N +F  G G+     R+++R+ +D N
Sbjct: 185 ----------ESNDGDRENCYRVGRLEEIMKNAWNGRFRLGLGL-----RSSLRQNNDEN 244

Query: 252 WWRFPTVDVVAISPKLNPKPPAPTP----------------TVASTKKKKKKVEKLTVIE 311
           WW+FPTV+   ISP++     A                   T    KKKKKK +K  V  
Sbjct: 245 WWKFPTVEFDQISPRIQTTAAAAADDGQSNVVDSSKIKTIVTAEGDKKKKKKKKKKKVAP 304

Query: 312 SKKTAPPKEKSSEKQTIPKSKPPGLLLKLNYEAVADAWSARGSPFSDNNPGSKSAGNDVN 371
           +   +   E +     + +   P  LLKL+Y+ V +AWS + SPFSD   GS + G D +
Sbjct: 305 AAAESKSSEVTDSNPKLEQRVSP--LLKLDYDGVLEAWSGKESPFSDEILGSDADGVDFH 364

Query: 372 ARLAQIDLFSDGGGLLREASVLRYKEKRRTRLFSKKIRYQVKKVNDDVRPRLK------- 405
            RL +IDLF + G  +REASVLRYKEKRR RLFSKKIRYQV+K+N D RPR+K       
Sbjct: 365 VRLGEIDLFGESG--MREASVLRYKEKRRNRLFSKKIRYQVRKLNADQRPRMKVKDWHCN 401

[Close]

BLAST of CmoCh12G009170 vs. TAIR 10
Match: AT5G57180.1 (chloroplast import apparatus 2 )

HSP 1 Score: 235.0 bits (598), Expect = 1.1e-61
Identity = 193/443 (43.57%), Postives = 247/443 (55.76%), Query Frame = 0


Query: 1   MSSPFISGGG--RAYNFDLEIVKS-PSSSWTRTSQTSSPSSTLSE------AISTRKSRT 60
           MS+   SGGG   AY+F+LE VKS P SS T T++ +SPSST+SE      AISTRK RT
Sbjct: 1   MSACLSSGGGGAAAYSFELEKVKSPPPSSSTTTTRATSPSSTISESSNSPLAISTRKPRT 60

Query: 61  PRKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDSLFC--------ESAELLLP 120
            RKRPNQTYNEA  LLSTAYPN+FS+ +L++ +K   S +S F         ++++LLLP
Sbjct: 61  QRKRPNQTYNEAATLLSTAYPNIFSS-NLSSKQKTHSSSNSHFYGPLLSDNDDASDLLLP 120

Query: 121 FRVIDSSGFLLNQPLLHEKPNSQIQSKLANLWESRPCSSPGEIDFQPNSMEMEDFDAESI 180
           +  I+   FL + P +  K       K  N      C   GEI+    S   ++FDAESI
Sbjct: 121 YESIEEPDFLFH-PTIQTKTEFFSDQKEVN--SGGDCYG-GEIEKFDFS---DEFDAESI 180

Query: 181 LDEEVEEGIDSIMGNLSVDNLETA-----------NSAQDCSTDNPKNRNCY----WNPI 240
           LDE++EEGIDSIMG +   N  +               +  S    K         WN  
Sbjct: 181 LDEDIEEGIDSIMGTVVESNSNSGIYESRVPGMINRGGRSSSNRIGKLEQMMMINSWNRS 240

Query: 241 GLGFNQKFEFGFGMRKAIERAAIRRVDDGNWWRFPTVDVVAISPKLNPKPPAPTPTVAST 300
             GFN  F  G G+     R+A+R  DD   W+  TVD   ISP++       T T  ST
Sbjct: 241 SNGFN--FPLGLGL-----RSALRENDDTKLWKIHTVDFEQISPRIQ---TVKTETAIST 300

Query: 301 KKKKKKVEKLTVIESKKTAPPKEKSSEKQTIPKS----------------KPPGLLLKLN 360
             ++K   K  VI  +K+   K+K  +K T+  +                K  G LLKL+
Sbjct: 301 VDEEKSDGKKVVISGEKS--NKKKKKKKMTVTTTLITESKSLEDTEETSLKRTGPLLKLD 360

Query: 361 YEAVADAWSARGSPFSDNNPGSKSAGNDVNARLAQIDLFSDGGGLLREASVLRYKEKRRT 396
           Y+ V +AWS + SPF D   GS++   DVNARLAQIDLF D G  +REASVLRYKEKRRT
Sbjct: 361 YDGVLEAWSDKTSPFPDEIQGSEAV--DVNARLAQIDLFGDSG--MREASVLRYKEKRRT 419

[Close]

BLAST of CmoCh12G009170 vs. TAIR 10
Match: AT5G57180.3 (chloroplast import apparatus 2 )

HSP 1 Score: 160.6 bits (405), Expect = 2.7e-39
Identity = 152/396 (38.38%), Postives = 202/396 (51.01%), Query Frame = 0


Query: 1   MSSPFISGGG--RAYNFDLEIVKS-PSSSWTRTSQTSSPSSTLSE------AISTRKSRT 60
           MS+   SGGG   AY+F+LE VKS P SS T T++ +SPSST+SE      AISTRK RT
Sbjct: 1   MSACLSSGGGGAAAYSFELEKVKSPPPSSSTTTTRATSPSSTISESSNSPLAISTRKPRT 60

Query: 61  PRKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDSLFC--------ESAELLLP 120
            RKRPNQTYNEA  LLSTAYPN+FS+ +L++ +K   S +S F         ++++LLLP
Sbjct: 61  QRKRPNQTYNEAATLLSTAYPNIFSS-NLSSKQKTHSSSNSHFYGPLLSDNDDASDLLLP 120

Query: 121 FRVIDSSGFLLNQPLLHEKPNSQIQSKLANLWESRPCSSPGEIDFQPNSMEMEDFDAESI 180
           +  I+   FL + P +  K       K  N      C   GEI+    S   ++FDAESI
Sbjct: 121 YESIEEPDFLFH-PTIQTKTEFFSDQKEVN--SGGDCYG-GEIEKFDFS---DEFDAESI 180

Query: 181 LDEEVEEGIDSIMGNLSVDNLETA-----------NSAQDCSTDNPKNRNCY----WNPI 240
           LDE++EEGIDSIMG +   N  +               +  S    K         WN  
Sbjct: 181 LDEDIEEGIDSIMGTVVESNSNSGIYESRVPGMINRGGRSSSNRIGKLEQMMMINSWNRS 240

Query: 241 GLGFNQKFEFGFGMRKAIERAAIRRVDDGNWWRFPTVDVVAISPKLNPKPPAPTPTVAST 300
             GFN  F  G G+     R+A+R  DD   W+  TVD   ISP++       T T  ST
Sbjct: 241 SNGFN--FPLGLGL-----RSALRENDDTKLWKIHTVDFEQISPRIQ---TVKTETAIST 300

Query: 301 KKKKKKVEKLTVIESKKTAPPKEKSSEKQTIPKS----------------KPPGLLLKLN 349
             ++K   K  VI  +K+   K+K  +K T+  +                K  G LLKL+
Sbjct: 301 VDEEKSDGKKVVISGEKS--NKKKKKKKMTVTTTLITESKSLEDTEETSLKRTGPLLKLD 360

The following BLAST results are available for this feature:

BLAST of CmoCh12G009170 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LU68	5.6e-66	44.59	Protein CHLOROPLAST IMPORT APPARATUS 2 OS=Arabidopsis thaliana OX=3702 GN=CIA2 P...	[more]
Q8RWD0	3.2e-13	36.13	Zinc finger protein CONSTANS-LIKE 16 OS=Arabidopsis thaliana OX=3702 GN=COL16 PE...	[more]
Q9C9A9	4.6e-12	41.50	Zinc finger protein CONSTANS-LIKE 7 OS=Arabidopsis thaliana OX=3702 GN=COL7 PE=2...	[more]
Q9M9B3	3.9e-11	46.74	Zinc finger protein CONSTANS-LIKE 8 OS=Arabidopsis thaliana OX=3702 GN=COL8 PE=1...	[more]
Q8LG76	5.6e-10	26.48	Zinc finger protein CONSTANS-LIKE 6 OS=Arabidopsis thaliana OX=3702 GN=COL6 PE=2...	[more]

BLAST of CmoCh12G009170 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FBD7	5.9e-228	100.00	protein CHLOROPLAST IMPORT APPARATUS 2-like OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1HLT7	1.5e-218	96.85	protein CHLOROPLAST IMPORT APPARATUS 2-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1D908	1.9e-181	82.78	protein CHLOROPLAST IMPORT APPARATUS 2 OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A0A0LGV4	8.6e-179	80.84	CCT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G061540 PE=4 SV...	[more]
A0A1S3BQX8	1.1e-178	81.44	protein CHLOROPLAST IMPORT APPARATUS 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC...	[more]

BLAST of CmoCh12G009170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G57180.2	3.9e-67	44.59	chloroplast import apparatus 2	[more]
AT4G25990.1	1.3e-65	42.42	CCT motif family protein	[more]
AT4G25990.2	1.3e-62	40.96	CCT motif family protein	[more]
AT5G57180.1	1.1e-61	43.57	chloroplast import apparatus 2	[more]
AT5G57180.3	2.7e-39	38.38	chloroplast import apparatus 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010402	CCT domain	PFAM	PF06203	CCT	coord: 359..401 e-value: 7.5E-15 score: 54.8
IPR010402	CCT domain	PROSITE	PS51017	CCT	coord: 359..401 score: 14.663759
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 275..298
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..59
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 253..303
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..46
None	No IPR available	PANTHER	PTHR31874:SF10	OS02G0148000 PROTEIN	coord: 1..405
None	No IPR available	PANTHER	PTHR31874	CCT MOTIF FAMILY PROTEIN, EXPRESSED	coord: 1..405

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh12G009170.1	CmoCh12G009170.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding