CmoCh12G008740 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCTCAACCAACAACAAGAGACAAAAGCCGAAGTCGCCCTCGTGCTTCTTTTCGATCTTCAGCTTATTTAGATCTCGAGATAGCAGAAAGAGGCGAGATGAAACGATAGACGATATGAGAAAGGTGTGGCCGAGCGATGAAGACAGAGACCGATATTGGGTGGCTGAGCCTGGCATTGATAGGAAAGCTAAGGCTTACATCGACAAGATTCATACCCAAATCCGCTCTTCTGGAACTGAATGA ATGGCCTCAACCAACAACAAGAGACAAAAGCCGAAGTCGCCCTCGTGCTTCTTTTCGATCTTCAGCTTATTTAGATCTCGAGATAGCAGAAAGAGGCGAGATGAAACGATAGACGATATGAGAAAGGTGTGGCCGAGCGATGAAGACAGAGACCGATATTGGGTGGCTGAGCCTGGCATTGATAGGAAAGCTAAGGCTTACATCGACAAGATTCATACCCAAATCCGCTCTTCTGGAACTGAATGA ATGGCCTCAACCAACAACAAGAGACAAAAGCCGAAGTCGCCCTCGTGCTTCTTTTCGATCTTCAGCTTATTTAGATCTCGAGATAGCAGAAAGAGGCGAGATGAAACGATAGACGATATGAGAAAGGTGTGGCCGAGCGATGAAGACAGAGACCGATATTGGGTGGCTGAGCCTGGCATTGATAGGAAAGCTAAGGCTTACATCGACAAGATTCATACCCAAATCCGCTCTTCTGGAACTGAATGA MASTNNKRQKPKSPSCFFSIFSLFRSRDSRKRRDETIDDMRKVWPSDEDRDRYWVAEPGIDRKAKAYIDKIHTQIRSSGTE Homology
BLAST of CmoCh12G008740 vs. ExPASy TrEMBL
Match: A0A0A0LJ24 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G034820 PE=4 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 3.8e-22 Identity = 60/83 (72.29%), Postives = 68/83 (81.93%), Query Frame = 0
BLAST of CmoCh12G008740 vs. ExPASy TrEMBL
Match: A0A5D3BDY2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G00610 PE=4 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 5.0e-22 Identity = 59/80 (73.75%), Postives = 66/80 (82.50%), Query Frame = 0
BLAST of CmoCh12G008740 vs. ExPASy TrEMBL
Match: W9R5Q4 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_022654 PE=4 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 5.2e-11 Identity = 41/76 (53.95%), Postives = 54/76 (71.05%), Query Frame = 0
BLAST of CmoCh12G008740 vs. ExPASy TrEMBL
Match: A0A7J0ERL5 (Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_06g0010680 PE=4 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 2.0e-10 Identity = 41/74 (55.41%), Postives = 52/74 (70.27%), Query Frame = 0
BLAST of CmoCh12G008740 vs. ExPASy TrEMBL
Match: V4SLM0 (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10013222mg PE=4 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 3.7e-09 Identity = 33/65 (50.77%), Postives = 45/65 (69.23%), Query Frame = 0
BLAST of CmoCh12G008740 vs. TAIR 10
Match: AT3G05858.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G26620.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 57.8 bits (138), Expect = 4.8e-09 Identity = 34/59 (57.63%), Postives = 40/59 (67.80%), Query Frame = 0
BLAST of CmoCh12G008740 vs. TAIR 10
Match: AT5G26620.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05858.1); Has 48 Blast hits to 48 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 55.1 bits (131), Expect = 3.1e-08 Identity = 30/51 (58.82%), Postives = 34/51 (66.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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