CmoCh12G008720 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh12G008720
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	MYB transcription factor
Location	Cmo_Chr12: 7941615 .. 7943058 (-)
RNA-Seq Expression	CmoCh12G008720
Synteny	CmoCh12G008720

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAATATTATATATATATTTGCCCATAAAAATTAAAGAGTTGGAGTTGAAGAAAAGGAGTTCATATGGGAAGGCACTCTTGCTGTTACAAGCAGAAGCTAAGGAAAGGGCTTTGGTCACCTGAAGAAGATGAGAAGCTCCTTAACCATATCACCAAACATGGTCATGGCTGTTGGAGTTCGGTCCCTAAACTCGCAGGTAATTAACTTTTCATCCTCTTCCCTTTAATGGGTTCAAAAAAGTTACAAGATTTGAGATTTAGTTCTCGAATTTCGAGGAAGAAAAGAAAGAAAGTAAGAAAGTAAGAAAAGGTTAACTTTTTAACACGACCCTTATGGATCTCTAGGCTTACAAAGGTGCGGGAAGAGTTGTAGATTGAGATGGATTAATTATCTTAAGCCAGATTTAAAAAGAGGCCCGTTCTCACAACAAGAAGAAGATTTGATAATTGAGCTCCATTCCGTTCTAGGCAACAGGTTTGTTTTCCCTTCTCTGTTCTTCCCTTTTGTTTTTGGTTTGTGACTCATTTTATAATATATTATTCGTTTAGATGGTCACAAATTGCTGCTCAACTACCTGGACGAACCGACAACGAAATAAAGAACCTATGGAACTCGTGCATAAAAAAGAAGCTAAAGCAAAAAGGCATCGACCCGAACACTCACAAGCCTTTCATAGACAAAGAAATCAGCAATGAAAACAACATTACCATATTAGATGATAAAAAAATCCATGAAAAGGCTTCATCCATTGAAGTAGTTCCAAAGCATTCAAGTTCCGACATGTCGACCACTACTACTTACTTGAACGACAAATCGGAGCACATGAGTATCCCTATAACTATTCCAAATAATAACACCAACCCTTTTGAAGCCATTTCAAATTTGCTTTTCCCCACTCCCAATTCATGTGAAAATCCTCCTATTGTAAGTTCTAACGCCTTCTCGTGGCAGCCCGATGAGTTGCTTCAAACCGCCTCCGATCTCATGAGAAGTGATTGGCATCATCAGATCAATCACCGTCACCCGACCCTCCAACCCGAACTATTAGGGCAACCGACCTACCCGTAATTCTATCATAGCAAGGTACGTGTTATGTTACTATATCTGTTTTAGATCTAAACCTTCGTAACTTTTCTCCACCAATGAGCCAAAGTTACGAGACTTATATATCAGAGATTCGAGGTTTTGTGACATAGTTCGTATTCTTTTAAAACAACCCTTTAATTAATTAGGATTTCAAGAAACGAGACACTCGTATCGACTATCGAATATGTATTTTGTAATGGGTTTTGAGAGTGATAATATAAAGCGTTATGAAATTATTAATGGACCATGGTTCTTTAAATGGCTGTCCATCATTGTCTCCTGAAGATGGGGACTTTTTTCACTTTTTGATGTGGCCATCCATCTATCCTTTTCTAAATTACTACTTTGAATCAACCTG

mRNA sequence

TAATATTATATATATATTTGCCCATAAAAATTAAAGAGTTGGAGTTGAAGAAAAGGAGTTCATATGGGAAGGCACTCTTGCTGTTACAAGCAGAAGCTAAGGAAAGGGCTTTGGTCACCTGAAGAAGATGAGAAGCTCCTTAACCATATCACCAAACATGGTCATGGCTGTTGGAGTTCGGTCCCTAAACTCGCAGGCTTACAAAGGTGCGGGAAGAGTTGTAGATTGAGATGGATTAATTATCTTAAGCCAGATTTAAAAAGAGGCCCGTTCTCACAACAAGAAGAAGATTTGATAATTGAGCTCCATTCCGTTCTAGGCAACAGATGGTCACAAATTGCTGCTCAACTACCTGGACGAACCGACAACGAAATAAAGAACCTATGGAACTCGTGCATAAAAAAGAAGCTAAAGCAAAAAGGCATCGACCCGAACACTCACAAGCCTTTCATAGACAAAGAAATCAGCAATGAAAACAACATTACCATATTAGATGATAAAAAAATCCATGAAAAGGCTTCATCCATTGAAGTAGTTCCAAAGCATTCAAGTTCCGACATGTCGACCACTACTACTTACTTGAACGACAAATCGGAGCACATGAGTATCCCTATAACTATTCCAAATAATAACACCAACCCTTTTGAAGCCATTTCAAATTTGCTTTTCCCCACTCCCAATTCATGTGAAAATCCTCCTATTGTAAGTTCTAACGCCTTCTCGTGGCAGCCCGATGAGTTGCTTCAAACCGCCTCCGATCTCATGAGAAGTGATTGGCATCATCAGATCAATCACCGTCACCCGACCCTCCAACCCGAACTATTAGGGCAACCGACCTACCCGTAATTCTATCATAGCAAGGTACGTGTTATGTTACTATATCTGTTTTAGATCTAAACCTTCGTAACTTTTCTCCACCAATGAGCCAAAGTTACGAGACTTATATATCAGAGATTCGAGGTTTTGTGACATAGTTCGTATTCTTTTAAAACAACCCTTTAATTAATTAGGATTTCAAGAAACGAGACACTCGTATCGACTATCGAATATGTATTTTGTAATGGGTTTTGAGAGTGATAATATAAAGCGTTATGAAATTATTAATGGACCATGGTTCTTTAAATGGCTGTCCATCATTGTCTCCTGAAGATGGGGACTTTTTTCACTTTTTGATGTGGCCATCCATCTATCCTTTTCTAAATTACTACTTTGAATCAACCTG

Coding sequence (CDS)

ATGGGAAGGCACTCTTGCTGTTACAAGCAGAAGCTAAGGAAAGGGCTTTGGTCACCTGAAGAAGATGAGAAGCTCCTTAACCATATCACCAAACATGGTCATGGCTGTTGGAGTTCGGTCCCTAAACTCGCAGGCTTACAAAGGTGCGGGAAGAGTTGTAGATTGAGATGGATTAATTATCTTAAGCCAGATTTAAAAAGAGGCCCGTTCTCACAACAAGAAGAAGATTTGATAATTGAGCTCCATTCCGTTCTAGGCAACAGATGGTCACAAATTGCTGCTCAACTACCTGGACGAACCGACAACGAAATAAAGAACCTATGGAACTCGTGCATAAAAAAGAAGCTAAAGCAAAAAGGCATCGACCCGAACACTCACAAGCCTTTCATAGACAAAGAAATCAGCAATGAAAACAACATTACCATATTAGATGATAAAAAAATCCATGAAAAGGCTTCATCCATTGAAGTAGTTCCAAAGCATTCAAGTTCCGACATGTCGACCACTACTACTTACTTGAACGACAAATCGGAGCACATGAGTATCCCTATAACTATTCCAAATAATAACACCAACCCTTTTGAAGCCATTTCAAATTTGCTTTTCCCCACTCCCAATTCATGTGAAAATCCTCCTATTGTAAGTTCTAACGCCTTCTCGTGGCAGCCCGATGAGTTGCTTCAAACCGCCTCCGATCTCATGAGAAGTGATTGGCATCATCAGATCAATCACCGTCACCCGACCCTCCAACCCGAACTATTAGGGCAACCGACCTACCCGTAA

Protein sequence

MGRHSCCYKQKLRKGLWSPEEDEKLLNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLKPDLKRGPFSQQEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKGIDPNTHKPFIDKEISNENNITILDDKKIHEKASSIEVVPKHSSSDMSTTTTYLNDKSEHMSIPITIPNNNTNPFEAISNLLFPTPNSCENPPIVSSNAFSWQPDELLQTASDLMRSDWHHQINHRHPTLQPELLGQPTYP

Homology

[Close]

BLAST of CmoCh12G008720 vs. ExPASy Swiss-Prot
Match: Q8LPH6 (Transcription factor MYB86 OS=Arabidopsis thaliana OX=3702 GN=MYB86 PE=2 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 7.6e-69
Identity = 122/163 (74.85%), Postives = 135/163 (82.82%), Query Frame = 0


Query: 1   MGRHSCCYKQKLRKGLWSPEEDEKLLNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60
           MGRHSCC+KQKLRKGLWSPEEDEKLLN+IT+HGHGCWSSVPKLAGLQRCGKSCRLRWINY
Sbjct: 1   MGRHSCCFKQKLRKGLWSPEEDEKLLNYITRHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60

Query: 61  LKPDLKRGPFSQQEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG 120
           L+PDLKRG FSQ EE LIIELH+ LGNRWSQIA +LPGRTDNEIKN WNSC+KKKL++KG
Sbjct: 61  LRPDLKRGAFSQDEESLIIELHAALGNRWSQIATRLPGRTDNEIKNFWNSCLKKKLRRKG 120

Query: 121 IDPNTHKPFIDKEISNENNITILDDKKIHEKASSIEVVPKHSS 164
           IDP THKP I  E+ + N         I +K +S EVV    S
Sbjct: 121 IDPTTHKPLITNELQSLN--------VIDQKLTSSEVVKSTGS 155

[Close]

BLAST of CmoCh12G008720 vs. ExPASy Swiss-Prot
Match: Q8VZQ2 (Transcription factor MYB61 OS=Arabidopsis thaliana OX=3702 GN=MYB61 PE=2 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 1.3e-68
Identity = 119/148 (80.41%), Postives = 134/148 (90.54%), Query Frame = 0


Query: 1   MGRHSCCYKQKLRKGLWSPEEDEKLLNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60
           MGRHSCCYKQKLRKGLWSPEEDEKLL HIT HGHGCWSSVPKLAGLQRCGKSCRLRWINY
Sbjct: 1   MGRHSCCYKQKLRKGLWSPEEDEKLLTHITNHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60

Query: 61  LKPDLKRGPFSQQEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG 120
           L+PDLKRG FS +EE+LI+ELH+VLGNRWSQIA++LPGRTDNEIKNLWNS IKKKLKQ+G
Sbjct: 61  LRPDLKRGAFSPEEENLIVELHAVLGNRWSQIASRLPGRTDNEIKNLWNSSIKKKLKQRG 120

Query: 121 IDPNTHKPFIDKE-ISNENNITILDDKK 148
           IDPNTHKP  + E  S+++  T  ++K+
Sbjct: 121 IDPNTHKPISEVESFSDKDKPTTSNNKR 148

[Close]

BLAST of CmoCh12G008720 vs. ExPASy Swiss-Prot
Match: P20027 (Myb-related protein Hv33 OS=Hordeum vulgare OX=4513 GN=MYB2 PE=2 SV=3)

HSP 1 Score: 220.7 bits (561), Expect = 1.9e-56
Identity = 101/130 (77.69%), Postives = 111/130 (85.38%), Query Frame = 0


Query: 1   MGRHS--CCYKQKLRKGLWSPEEDEKLLNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWI 60
           MGR S     + K+RKGLWSPEEDEKL NHI +HG GCWSSVP+LA L RCGKSCRLRWI
Sbjct: 1   MGRPSSGAVGQPKVRKGLWSPEEDEKLYNHIIRHGVGCWSSVPRLAALNRCGKSCRLRWI 60

Query: 61  NYLKPDLKRGPFSQQEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQ 120
           NYL+PDLKRG FSQQEED I+ LH +LGNRWSQIA+ LPGRTDNEIKN WNSCIKKKL+Q
Sbjct: 61  NYLRPDLKRGCFSQQEEDHIVALHQILGNRWSQIASHLPGRTDNEIKNFWNSCIKKKLRQ 120

Query: 121 KGIDPNTHKP 129
           +GIDP THKP
Sbjct: 121 QGIDPATHKP 130

[Close]

BLAST of CmoCh12G008720 vs. ExPASy Swiss-Prot
Match: P80073 (Myb-related protein Pp2 OS=Physcomitrium patens OX=3218 GN=PP2 PE=2 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 1.1e-51
Identity = 95/172 (55.23%), Postives = 123/172 (71.51%), Query Frame = 0


Query: 1   MGRHSCCYKQKLRKGLWSPEEDEKLLNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60
           MGR  CC K  LR+G W+ EED+KL++HIT +G  CW ++PKLAGL RCGKSCRLRW NY
Sbjct: 1   MGRKPCCEKVGLRRGPWTSEEDQKLVSHITNNGLSCWRAIPKLAGLLRCGKSCRLRWTNY 60

Query: 61  LKPDLKRGPFSQQEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG 120
           L+PDLKRG FS+ EE+LI++LH+ LGNRWS+IAAQLPGRTDNEIKN WN+ +KK+L+ +G
Sbjct: 61  LRPDLKRGIFSEAEENLILDLHATLGNRWSRIAAQLPGRTDNEIKNYWNTRLKKRLRSQG 120

Query: 121 IDPNTHKPFIDKEISNENNIT----------ILDDKKIHEKASSIEVVPKHS 163
           +DPNTH P  D ++ +  + T           + D    EK S  +  PK +
Sbjct: 121 LDPNTHLPLEDSKLDDTEDDTDDEGGDSSDVTMSDASKSEKRSKKKSKPKET 172

[Close]

BLAST of CmoCh12G008720 vs. ExPASy Swiss-Prot
Match: O49608 (Transcription factor MYB32 OS=Arabidopsis thaliana OX=3702 GN=MYB32 PE=1 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 3.2e-51
Identity = 87/139 (62.59%), Postives = 112/139 (80.58%), Query Frame = 0


Query: 1   MGRHSCCYKQKLRKGLWSPEEDEKLLNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60
           MGR  CC K    KG W+ EED+KL+++I  HG GCW S+P+ AGLQRCGKSCRLRWINY
Sbjct: 1   MGRSPCCEKDHTNKGAWTKEEDDKLISYIKAHGEGCWRSLPRSAGLQRCGKSCRLRWINY 60

Query: 61  LKPDLKRGPFSQQEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG 120
           L+PDLKRG F+ +E+DLII+LHS+LGN+WS IA +LPGRTDNEIKN WN+ +K+KL +KG
Sbjct: 61  LRPDLKRGNFTLEEDDLIIKLHSLLGNKWSLIATRLPGRTDNEIKNYWNTHVKRKLLRKG 120

Query: 121 IDPNTHKPFIDKEISNENN 140
           IDP TH+P  + + S +++
Sbjct: 121 IDPATHRPINETKTSQDSS 139

[Close]

BLAST of CmoCh12G008720 vs. ExPASy TrEMBL
Match: A0A6J1FHH0 (transcription factor MYB86-like OS=Cucurbita moschata OX=3662 GN=LOC111444189 PE=4 SV=1)

HSP 1 Score: 548.1 bits (1411), Expect = 1.9e-152
Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 1   MGRHSCCYKQKLRKGLWSPEEDEKLLNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60
           MGRHSCCYKQKLRKGLWSPEEDEKLLNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY
Sbjct: 1   MGRHSCCYKQKLRKGLWSPEEDEKLLNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60

Query: 61  LKPDLKRGPFSQQEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG 120
           LKPDLKRGPFSQQEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG
Sbjct: 61  LKPDLKRGPFSQQEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG 120

Query: 121 IDPNTHKPFIDKEISNENNITILDDKKIHEKASSIEVVPKHSSSDMSTTTTYLNDKSEHM 180
           IDPNTHKPFIDKEISNENNITILDDKKIHEKASSIEVVPKHSSSDMSTTTTYLNDKSEHM
Sbjct: 121 IDPNTHKPFIDKEISNENNITILDDKKIHEKASSIEVVPKHSSSDMSTTTTYLNDKSEHM 180

Query: 181 SIPITIPNNNTNPFEAISNLLFPTPNSCENPPIVSSNAFSWQPDELLQTASDLMRSDWHH 240
           SIPITIPNNNTNPFEAISNLLFPTPNSCENPPIVSSNAFSWQPDELLQTASDLMRSDWHH
Sbjct: 181 SIPITIPNNNTNPFEAISNLLFPTPNSCENPPIVSSNAFSWQPDELLQTASDLMRSDWHH 240

Query: 241 QINHRHPTLQPELLGQPTYP 261
           QINHRHPTLQPELLGQPTYP
Sbjct: 241 QINHRHPTLQPELLGQPTYP 260

[Close]

BLAST of CmoCh12G008720 vs. ExPASy TrEMBL
Match: A0A6J1HWT6 (transcription factor MYB86-like OS=Cucurbita maxima OX=3661 GN=LOC111468595 PE=4 SV=1)

HSP 1 Score: 498.0 bits (1281), Expect = 2.3e-137
Identity = 243/262 (92.75%), Postives = 248/262 (94.66%), Query Frame = 0


Query: 1   MGRHSCCYKQKLRKGLWSPEEDEKLLNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60
           MGR+SCCYKQKLRKGLWSPEEDEKLLNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY
Sbjct: 1   MGRYSCCYKQKLRKGLWSPEEDEKLLNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60

Query: 61  LKPDLKRGPFSQQEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG 120
           LKPDLKRGPFSQ EEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG
Sbjct: 61  LKPDLKRGPFSQPEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG 120

Query: 121 IDPNTHKPFIDKEISNE--NNITILDDKKIHEKASSIEVVPKHSSSDMSTTTTYLNDKSE 180
           IDPNTHKP++DKEISNE  NNITILDDKKIHEKASSIEVVP HSSSDMSTTT    DKSE
Sbjct: 121 IDPNTHKPYVDKEISNENNNNITILDDKKIHEKASSIEVVPNHSSSDMSTTT----DKSE 180

Query: 181 HMSIPITIPNNNTNPFEAISNLLFPTPNSCENPPIVSSNAFSWQPDELLQTASDLMRSDW 240
           +M I ITIPNNNTNPFEAISNLLFPTPNSCENPPI SSNAFSWQPDELLQTASDLMRSDW
Sbjct: 181 NMGIAITIPNNNTNPFEAISNLLFPTPNSCENPPI-SSNAFSWQPDELLQTASDLMRSDW 240

Query: 241 HHQINHRHPTLQPELLGQPTYP 261
           +HQINH HPTLQPELLG  TYP
Sbjct: 241 YHQINHHHPTLQPELLGHQTYP 257

[Close]

BLAST of CmoCh12G008720 vs. ExPASy TrEMBL
Match: A0A6J1DQE3 (transcription factor MYB61-like OS=Momordica charantia OX=3673 GN=LOC111023268 PE=4 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 3.0e-105
Identity = 210/303 (69.31%), Postives = 234/303 (77.23%), Query Frame = 0


Query: 1   MGRHSCCYKQKLRKGLWSPEEDEKLLNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60
           MGRHSCCYKQKLRKGLWSPEEDEKLLN+ITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY
Sbjct: 1   MGRHSCCYKQKLRKGLWSPEEDEKLLNYITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60

Query: 61  LKPDLKRGPFSQQEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG 120
           L+PDLKRGPFSQQEEDLIIELHSVLGNRWSQIA QLPGRTDNEIKNLWNSCIKKKLKQKG
Sbjct: 61  LRPDLKRGPFSQQEEDLIIELHSVLGNRWSQIAVQLPGRTDNEIKNLWNSCIKKKLKQKG 120

Query: 121 IDPNTHKPFIDKEISNENNITI-LDDKKIHE-KASSIEVVPKHS------------SSDM 180
           IDPNTHKP  + +I N+NN TI  +D+K HE KAS IEVVP ++            SSDM
Sbjct: 121 IDPNTHKPLSNLQIDNDNNNTIQSNDQKNHENKASPIEVVPNNTTATTATSTKPIESSDM 180

Query: 181 STTTT-----YLNDKSEHM-SIPITIPNNNTNPFEAISNLLFPTPNSC------------ 240
           S+++       +ND S+HM  +PI   ++N  PFEAIS+L FPTPNSC            
Sbjct: 181 SSSSCNFSFHQVNDGSDHMGGLPIIPNSSNATPFEAISSLFFPTPNSCAAHPRVRPSFSV 240

Query: 241 ---ENPPI----VSSNAFSWQPDELLQTASDL-MRSDW-HHQINHRH--PTLQPELLGQP 261
              ENPP+     +++AF WQPDELLQTASDL MR+DW HHQINHR    TLQ ELLGQ 
Sbjct: 241 VPSENPPVGAHNTTNSAFLWQPDELLQTASDLMMRNDWPHHQINHRQHITTLQTELLGQQ 300

[Close]

BLAST of CmoCh12G008720 vs. ExPASy TrEMBL
Match: A0A1S3BV70 (transcription factor MYB86-like OS=Cucumis melo OX=3656 GN=LOC103493851 PE=4 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 1.0e-100
Identity = 215/322 (66.77%), Postives = 233/322 (72.36%), Query Frame = 0


Query: 1   MGRHSCCYKQKLRKGLWSPEEDEKLLNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60
           MGRHSCCYKQKLRKGLWSPEEDEKLLN+IT HGHGCWSSVPKLAGLQRCGKSCRLRWINY
Sbjct: 1   MGRHSCCYKQKLRKGLWSPEEDEKLLNYITIHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60

Query: 61  LKPDLKRGPFSQQEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG 120
           L+PDLKRGPFSQQEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG
Sbjct: 61  LRPDLKRGPFSQQEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG 120

Query: 121 IDPNTHKPFIDKEISN--ENNITIL---DDKKIHEKASSI-EVVPKHSSS---------D 180
           IDP+THKP I+KEI N  +NN +I+   DDKK HEK   I EVVP +S++         D
Sbjct: 121 IDPHTHKPLIEKEIINNSDNNDSIIITSDDKKSHEKTFPIEEVVPTNSTTTRKSIESCFD 180

Query: 181 MSTTTT----------YLNDKSEHMSIPITIPNNNTN---PFE-AISNLLFPTPNSC--- 240
           MSTTTT           LND S  M +PI I +NNTN   PFE AISNL FP+ NSC   
Sbjct: 181 MSTTTTSTTCNFSNFHQLNDGSSLMDLPI-IQHNNTNDATPFEAAISNLFFPSSNSCGVA 240

Query: 241 -----------ENPP--IVSS---------------NAFSW-QPDELLQTASDLMRSDWH 261
                      EN P  IVSS               N F W   D+ LQTAS LM++DWH
Sbjct: 241 HVRPSISLLPSENNPSSIVSSTSEVVVHNNNNNNSNNGFLWHSDDQFLQTASVLMKNDWH 300

[Close]

BLAST of CmoCh12G008720 vs. ExPASy TrEMBL
Match: A0A6J1G4M4 (transcription factor MYB86-like OS=Cucurbita moschata OX=3662 GN=LOC111450683 PE=4 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 4.6e-93
Identity = 182/264 (68.94%), Postives = 198/264 (75.00%), Query Frame = 0


Query: 1   MGRHSCCYKQKLRKGLWSPEEDEKLLNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60
           MGRHSCC+KQKLRKGLWSPEEDEKLLN+ITKHGHGCWS+VPKLAGLQRCGKSCRLRWINY
Sbjct: 1   MGRHSCCFKQKLRKGLWSPEEDEKLLNYITKHGHGCWSTVPKLAGLQRCGKSCRLRWINY 60

Query: 61  LKPDLKRGPFSQQEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG 120
           L+PDLKRGPFSQQEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG
Sbjct: 61  LRPDLKRGPFSQQEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG 120

Query: 121 IDPNTHKPFIDKEISN--ENNITIL--DDKKIHEKASSIEVVPKHSSSDMSTTTTYLNDK 180
           IDPNTHKP++D+E +N  +NN  I+  +D+K HEKAS I+      S DMSTTT      
Sbjct: 121 IDPNTHKPYLDQETNNNGKNNSLIITSNDQKSHEKASPIQ------SPDMSTTT------ 180

Query: 181 SEHMSIPITIPNNNTNPFEAISNLLFPTPNSCENPPIVSS-------NAFSWQPDELLQT 240
                            FEA SNL  P+ NSC   P  +S       N F WQPDE L  
Sbjct: 181 -----------------FEAFSNLFSPSLNSCAVAPSSTSQVVHNTNNGFLWQPDEFLSA 230

Query: 241 ASDLMRSDWHHQINHRHPTLQPEL 254
            S+LMRSDW     HRHPTLQPEL
Sbjct: 241 PSELMRSDW-----HRHPTLQPEL 230

[Close]

BLAST of CmoCh12G008720 vs. TAIR 10
Match: AT5G26660.1 (myb domain protein 86 )

HSP 1 Score: 261.9 bits (668), Expect = 5.4e-70
Identity = 122/163 (74.85%), Postives = 135/163 (82.82%), Query Frame = 0


Query: 1   MGRHSCCYKQKLRKGLWSPEEDEKLLNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60
           MGRHSCC+KQKLRKGLWSPEEDEKLLN+IT+HGHGCWSSVPKLAGLQRCGKSCRLRWINY
Sbjct: 1   MGRHSCCFKQKLRKGLWSPEEDEKLLNYITRHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60

Query: 61  LKPDLKRGPFSQQEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG 120
           L+PDLKRG FSQ EE LIIELH+ LGNRWSQIA +LPGRTDNEIKN WNSC+KKKL++KG
Sbjct: 61  LRPDLKRGAFSQDEESLIIELHAALGNRWSQIATRLPGRTDNEIKNFWNSCLKKKLRRKG 120

Query: 121 IDPNTHKPFIDKEISNENNITILDDKKIHEKASSIEVVPKHSS 164
           IDP THKP I  E+ + N         I +K +S EVV    S
Sbjct: 121 IDPTTHKPLITNELQSLN--------VIDQKLTSSEVVKSTGS 155

[Close]

BLAST of CmoCh12G008720 vs. TAIR 10
Match: AT1G09540.1 (myb domain protein 61 )

HSP 1 Score: 261.2 bits (666), Expect = 9.2e-70
Identity = 119/148 (80.41%), Postives = 134/148 (90.54%), Query Frame = 0


Query: 1   MGRHSCCYKQKLRKGLWSPEEDEKLLNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60
           MGRHSCCYKQKLRKGLWSPEEDEKLL HIT HGHGCWSSVPKLAGLQRCGKSCRLRWINY
Sbjct: 1   MGRHSCCYKQKLRKGLWSPEEDEKLLTHITNHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60

Query: 61  LKPDLKRGPFSQQEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG 120
           L+PDLKRG FS +EE+LI+ELH+VLGNRWSQIA++LPGRTDNEIKNLWNS IKKKLKQ+G
Sbjct: 61  LRPDLKRGAFSPEEENLIVELHAVLGNRWSQIASRLPGRTDNEIKNLWNSSIKKKLKQRG 120

Query: 121 IDPNTHKPFIDKE-ISNENNITILDDKK 148
           IDPNTHKP  + E  S+++  T  ++K+
Sbjct: 121 IDPNTHKPISEVESFSDKDKPTTSNNKR 148

[Close]

BLAST of CmoCh12G008720 vs. TAIR 10
Match: AT4G01680.1 (myb domain protein 55 )

HSP 1 Score: 260.8 bits (665), Expect = 1.2e-69
Identity = 125/180 (69.44%), Postives = 143/180 (79.44%), Query Frame = 0


Query: 1   MGRHSCCYKQKLRKGLWSPEEDEKLLNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60
           MGRHSCCYKQKLRKGLWSPEEDEKLL +ITK+GHGCWSSVPK AGLQRCGKSCRLRWINY
Sbjct: 1   MGRHSCCYKQKLRKGLWSPEEDEKLLRYITKYGHGCWSSVPKQAGLQRCGKSCRLRWINY 60

Query: 61  LKPDLKRGPFSQQEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG 120
           L+PDLKRG FSQ EE+LIIELH+VLGNRWSQIAAQLPGRTDNEIKNLWNSC+KKKL+ +G
Sbjct: 61  LRPDLKRGAFSQDEENLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKKLRLRG 120

Query: 121 IDPNTHKPFIDKEISNENNITILDDKKIHEKASSIEVVPKHSSSDMSTTTTYLNDKSEHM 180
           IDP THK   + E   +      D  K  EK+    +V    SS  +T +T  N+ ++H+
Sbjct: 121 IDPVTHKLLTEIETGTD------DKTKPVEKSQQTYLVETDGSSSTTTCSTNQNNNTDHL 174

[Close]

BLAST of CmoCh12G008720 vs. TAIR 10
Match: AT4G01680.3 (myb domain protein 55 )

HSP 1 Score: 260.8 bits (665), Expect = 1.2e-69
Identity = 125/180 (69.44%), Postives = 143/180 (79.44%), Query Frame = 0


Query: 1   MGRHSCCYKQKLRKGLWSPEEDEKLLNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60
           MGRHSCCYKQKLRKGLWSPEEDEKLL +ITK+GHGCWSSVPK AGLQRCGKSCRLRWINY
Sbjct: 1   MGRHSCCYKQKLRKGLWSPEEDEKLLRYITKYGHGCWSSVPKQAGLQRCGKSCRLRWINY 60

Query: 61  LKPDLKRGPFSQQEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG 120
           L+PDLKRG FSQ EE+LIIELH+VLGNRWSQIAAQLPGRTDNEIKNLWNSC+KKKL+ +G
Sbjct: 61  LRPDLKRGAFSQDEENLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKKLRLRG 120

Query: 121 IDPNTHKPFIDKEISNENNITILDDKKIHEKASSIEVVPKHSSSDMSTTTTYLNDKSEHM 180
           IDP THK   + E   +      D  K  EK+    +V    SS  +T +T  N+ ++H+
Sbjct: 121 IDPVTHKLLTEIETGTD------DKTKPVEKSQQTYLVETDGSSSTTTCSTNQNNNTDHL 174

[Close]

BLAST of CmoCh12G008720 vs. TAIR 10
Match: AT1G57560.1 (myb domain protein 50 )

HSP 1 Score: 256.1 bits (653), Expect = 2.9e-68
Identity = 129/218 (59.17%), Postives = 161/218 (73.85%), Query Frame = 0


Query: 1   MGRHSCCYKQKLRKGLWSPEEDEKLLNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60
           M RHSCCYKQKLRKGLWSPEEDEKLLN+ITKHGHGCWSSVPKLAGL+RCGKSCRLRWINY
Sbjct: 1   MKRHSCCYKQKLRKGLWSPEEDEKLLNYITKHGHGCWSSVPKLAGLERCGKSCRLRWINY 60

Query: 61  LKPDLKRGPFSQQEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG 120
           L+PDLKRG FS +E++LI+ELH+VLGNRWSQIAA+LPGRTDNEIKNLWNSCIKKKL +KG
Sbjct: 61  LRPDLKRGAFSSEEQNLIVELHAVLGNRWSQIAARLPGRTDNEIKNLWNSCIKKKLMKKG 120

Query: 121 IDPNTHKPFIDKEISNENNITILDDKKIHEKASSIEVVPKHSSSDMSTTTTYLNDKSEHM 180
           IDP THKP    E+  E N +  ++       ++ ++  K  +SD +  + +  ++S  +
Sbjct: 121 IDPITHKPL--SEVGKETNRSDNNNSTSFSSETNQDLFVK-KTSDFAEYSAFQKEESNSV 180

Query: 181 SIPITIPNNNTNPFE----AISNLLFPTPNSCENPPIV 215
           S+  ++ +     F     ++SN  F T   C  P I+
Sbjct: 181 SLRNSLSSMIPTQFNIDDGSVSNAGFDT-QVCVKPSII 214

The following BLAST results are available for this feature:

BLAST of CmoCh12G008720 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LPH6	7.6e-69	74.85	Transcription factor MYB86 OS=Arabidopsis thaliana OX=3702 GN=MYB86 PE=2 SV=1	[more]
Q8VZQ2	1.3e-68	80.41	Transcription factor MYB61 OS=Arabidopsis thaliana OX=3702 GN=MYB61 PE=2 SV=1	[more]
P20027	1.9e-56	77.69	Myb-related protein Hv33 OS=Hordeum vulgare OX=4513 GN=MYB2 PE=2 SV=3	[more]
P80073	1.1e-51	55.23	Myb-related protein Pp2 OS=Physcomitrium patens OX=3218 GN=PP2 PE=2 SV=1	[more]
O49608	3.2e-51	62.59	Transcription factor MYB32 OS=Arabidopsis thaliana OX=3702 GN=MYB32 PE=1 SV=1	[more]

BLAST of CmoCh12G008720 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FHH0	1.9e-152	100.00	transcription factor MYB86-like OS=Cucurbita moschata OX=3662 GN=LOC111444189 PE...	[more]
A0A6J1HWT6	2.3e-137	92.75	transcription factor MYB86-like OS=Cucurbita maxima OX=3661 GN=LOC111468595 PE=4...	[more]
A0A6J1DQE3	3.0e-105	69.31	transcription factor MYB61-like OS=Momordica charantia OX=3673 GN=LOC111023268 P...	[more]
A0A1S3BV70	1.0e-100	66.77	transcription factor MYB86-like OS=Cucumis melo OX=3656 GN=LOC103493851 PE=4 SV=...	[more]
A0A6J1G4M4	4.6e-93	68.94	transcription factor MYB86-like OS=Cucurbita moschata OX=3662 GN=LOC111450683 PE...	[more]

BLAST of CmoCh12G008720 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G26660.1	5.4e-70	74.85	myb domain protein 86	[more]
AT1G09540.1	9.2e-70	80.41	myb domain protein 61	[more]
AT4G01680.1	1.2e-69	69.44	myb domain protein 55	[more]
AT4G01680.3	1.2e-69	69.44	myb domain protein 55	[more]
AT1G57560.1	2.9e-68	59.17	myb domain protein 50	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 13..63 e-value: 3.8E-13 score: 59.7 coord: 66..114 e-value: 1.7E-12 score: 57.5
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 9..61 score: 11.102862
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 62..112 score: 10.115808
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 69..109 e-value: 9.1379E-9 score: 48.3406
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 17..61 e-value: 1.43549E-11 score: 56.0446
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 14..61 e-value: 5.5E-15 score: 55.3 coord: 67..110 e-value: 4.1E-12 score: 46.1
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 66..116 score: 21.933664
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 9..65 score: 24.872524
None	No IPR available	GENE3D	1.10.10.60		coord: 68..142 e-value: 4.6E-21 score: 76.6
None	No IPR available	GENE3D	1.10.10.60		coord: 11..67 e-value: 9.4E-20 score: 72.3
None	No IPR available	PANTHER	PTHR47997:SF41	HOMEODOMAIN-RELATED	coord: 1..165
None	No IPR available	PANTHER	PTHR47997	MYB DOMAIN PROTEIN 55	coord: 1..165
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 12..108

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh12G008720.1	CmoCh12G008720.1	mRNA