![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
CmoCh12G007490 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCACGACGATCTATATGGAAGGGCAGTTTTGTTGATGCATTCCTGTTGAGAATGAAGAAGAAGAGAGATCCTCTTTTGAACAGGAAAATTTGGTCACGTAGATCTTCGATTTTGCCGAAATTCGTTGATAGCTCCGTACGAATTTACAATGGAAAAACTTCTGTTCGTTGTAAGATCACTGAAGGAAGGGTTGGTCATAAATTTGGAGAGTTTGCATCGACACGGAAACGAAGACTTTCGAGAACAAATATTGGACAGGGAAAAAAAAGGGGAGAAAGTCAAGGTGCATATATGGCACGAAAAGGAAATCTGATTGAGCATTTCATATTCACTTTGATTTGAGAATCCAGTTTCTAGTAAAATCAGATATCTTATTCTATCAGAATCAGACGAGCCGCCTGACGCATTTACATTTCACCATTCAGAGCGCAATACATACATTCCTAAGAAGACGAAGAGGGGATCTCTCTCGATCTCAATTGAGACTCGCACCCACCCATTGGGGCAGGCTCGGGGGAACCTGTACCCCCATCTCCTTTGA ATGCCACGACGATCTATATGGAAGGGCAGTTTTGTTGATGCATTCCTGTTGAGAATGAAGAAGAAGAGAGATCCTCTTTTGAACAGGAAAATTTGGTCACGTAGATCTTCGATTTTGCCGAAATTCGTTGATAGCTCCGTACGAATTTACAATGGAAAAACTTCTGTTCGTTGTAAGATCACTGAAGGAAGGGTTGGTCATAAATTTGGAGAGTTTGCATCGACACGGAAACGAAGACTTTCGAGAACAAATATTGGACAGGGAAAAAAAAGGGGAGAAAGTCAAGAATCAGACGAGCCGCCTGACGCATTTACATTTCACCATTCAGAGCGCAATACATACATTCCTAAGAAGACGAAGAGGGGATCTCTCTCGATCTCAATTGAGACTCGCACCCACCCATTGGGGCAGGCTCGGGGGAACCTGTACCCCCATCTCCTTTGA ATGCCACGACGATCTATATGGAAGGGCAGTTTTGTTGATGCATTCCTGTTGAGAATGAAGAAGAAGAGAGATCCTCTTTTGAACAGGAAAATTTGGTCACGTAGATCTTCGATTTTGCCGAAATTCGTTGATAGCTCCGTACGAATTTACAATGGAAAAACTTCTGTTCGTTGTAAGATCACTGAAGGAAGGGTTGGTCATAAATTTGGAGAGTTTGCATCGACACGGAAACGAAGACTTTCGAGAACAAATATTGGACAGGGAAAAAAAAGGGGAGAAAGTCAAGAATCAGACGAGCCGCCTGACGCATTTACATTTCACCATTCAGAGCGCAATACATACATTCCTAAGAAGACGAAGAGGGGATCTCTCTCGATCTCAATTGAGACTCGCACCCACCCATTGGGGCAGGCTCGGGGGAACCTGTACCCCCATCTCCTTTGA MPRRSIWKGSFVDAFLLRMKKKRDPLLNRKIWSRRSSILPKFVDSSVRIYNGKTSVRCKITEGRVGHKFGEFASTRKRRLSRTNIGQGKKRGESQESDEPPDAFTFHHSERNTYIPKKTKRGSLSISIETRTHPLGQARGNLYPHLL Homology
BLAST of CmoCh12G007490 vs. ExPASy Swiss-Prot
Match: P27527 (Ribosomal protein S19, mitochondrial OS=Petunia hybrida OX=4102 GN=RPS19 PE=2 SV=2) HSP 1 Score: 163.7 bits (413), Expect = 1.6e-39 Identity = 81/93 (87.10%), Postives = 85/93 (91.40%), Query Frame = 0
BLAST of CmoCh12G007490 vs. ExPASy Swiss-Prot
Match: P39697 (40S ribosomal protein S19, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPS19 PE=1 SV=2) HSP 1 Score: 117.9 bits (294), Expect = 1.0e-25 Identity = 57/77 (74.03%), Postives = 66/77 (85.71%), Query Frame = 0
BLAST of CmoCh12G007490 vs. ExPASy Swiss-Prot
Match: P26874 (Ribosomal protein S19, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPS19 PE=3 SV=2) HSP 1 Score: 87.0 bits (214), Expect = 1.9e-16 Identity = 46/74 (62.16%), Postives = 51/74 (68.92%), Query Frame = 0
BLAST of CmoCh12G007490 vs. ExPASy Swiss-Prot
Match: Q2RQW4 (30S ribosomal protein S19 OS=Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIMB 8255 / S1) OX=269796 GN=rpsS PE=3 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 1.1e-13 Identity = 40/76 (52.63%), Postives = 52/76 (68.42%), Query Frame = 0
BLAST of CmoCh12G007490 vs. ExPASy Swiss-Prot
Match: Q8UE22 (30S ribosomal protein S19 OS=Agrobacterium fabrum (strain C58 / ATCC 33970) OX=176299 GN=rpsS PE=3 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 1.5e-13 Identity = 40/76 (52.63%), Postives = 51/76 (67.11%), Query Frame = 0
BLAST of CmoCh12G007490 vs. ExPASy TrEMBL
Match: D5I3F0 (Ribosomal protein S19 OS=Cucurbita pepo OX=3663 GN=rps19-1 PE=3 SV=1) HSP 1 Score: 183.0 bits (463), Expect = 9.3e-43 Identity = 91/95 (95.79%), Postives = 92/95 (96.84%), Query Frame = 0
BLAST of CmoCh12G007490 vs. ExPASy TrEMBL
Match: D5I3G6 (Ribosomal protein S19 OS=Cucurbita pepo OX=3663 GN=rps19-2 PE=3 SV=1) HSP 1 Score: 183.0 bits (463), Expect = 9.3e-43 Identity = 91/95 (95.79%), Postives = 92/95 (96.84%), Query Frame = 0
BLAST of CmoCh12G007490 vs. ExPASy TrEMBL
Match: D5I3A0 (Ribosomal protein S19 OS=Citrullus lanatus OX=3654 GN=rps19-1 PE=3 SV=1) HSP 1 Score: 179.9 bits (455), Expect = 7.9e-42 Identity = 88/92 (95.65%), Postives = 90/92 (97.83%), Query Frame = 0
BLAST of CmoCh12G007490 vs. ExPASy TrEMBL
Match: A0A7D6C0E4 (Ribosomal protein S19 OS=Luffa acutangula OX=56866 GN=rps19-2 PE=3 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 2.3e-41 Identity = 88/92 (95.65%), Postives = 89/92 (96.74%), Query Frame = 0
BLAST of CmoCh12G007490 vs. ExPASy TrEMBL
Match: D5I3D4 (Ribosomal protein S19 OS=Citrullus lanatus OX=3654 GN=rps19-2 PE=3 SV=1) HSP 1 Score: 175.6 bits (444), Expect = 1.5e-40 Identity = 87/92 (94.57%), Postives = 88/92 (95.65%), Query Frame = 0
BLAST of CmoCh12G007490 vs. TAIR 10
Match: AT5G47320.1 (ribosomal protein S19 ) HSP 1 Score: 117.9 bits (294), Expect = 7.1e-27 Identity = 57/77 (74.03%), Postives = 66/77 (85.71%), Query Frame = 0
BLAST of CmoCh12G007490 vs. TAIR 10
Match: ATCG00820.1 (ribosomal protein S19 ) HSP 1 Score: 50.8 bits (120), Expect = 1.1e-06 Identity = 28/75 (37.33%), Postives = 43/75 (57.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|