Homology
BLAST of CmoCh12G006630 vs. ExPASy Swiss-Prot
Match:
Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)
HSP 1 Score: 374.0 bits (959), Expect = 2.7e-102
Identity = 213/600 (35.50%), Postives = 311/600 (51.83%), Query Frame = 0
Query: 1 MKQLKQAHAQVLTSGLGSNSFALSRLLDFC-AEPRHGSLSHALKLYRHIQHPTICICNTM 60
++ L+ HAQ++ GL + ++ALS+L++FC P L +A+ +++ IQ P + I NTM
Sbjct: 46 LQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTM 105
Query: 61 IKAFLLRGEFLNAIVIYSAMRRNEIAPDSYTHPYVLKACARIKKFHLGESVHACAVKLGF 120
+ L + ++A+ +Y M + P+SYT P+VLK+CA+ K F G+ +H +KLG
Sbjct: 106 FRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGC 165
Query: 121 VLDVFVGNSLLVMYCAFGNMRDAGQVFDEMPELSAVSWTVMIYGYAKMGDVNTARGLFDR 180
LD++V SL+ MY G + DA +VFD+ P VS+T +I GYA G + A+ LFD
Sbjct: 166 DLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDE 225
Query: 181 APIKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVT-------------- 240
P+KD W AMISGY + +KE L +F+ M T V PDE+ +VT
Sbjct: 226 IPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELG 285
Query: 241 ------------------------------------------------------------ 300
Sbjct: 286 RQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHM 345
Query: 301 ---------------------------ILCACAHMGALDIGIWIHRYLSHLELPLTLRVS 360
IL ACAH+GA+DIG WIH Y+ +T S
Sbjct: 346 NLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASS 405
Query: 361 --TGLMDMYAKCGHLDMTRHLFDEMPQRDTICWNVMISGMAMHGDGEGALKLFKEMEKAR 420
T L+DMYAKCG ++ +F+ + + WN MI G AMHG + + LF M K
Sbjct: 406 LRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIG 465
Query: 421 IKPDDITFIAILAACSNSGMANEGLKILNKMCTIHKIEPKAEHYGCIIDLLSRAGRFEEA 480
I+PDDITF+ +L+ACS+SGM + G I M +K+ PK EHYGC+IDLL +G F+EA
Sbjct: 466 IQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEA 525
Query: 481 EGVIQRLPNTATASEEAVAWRAFLSACCKHGEMQQAEGAAERLFELE-RHSGAYVLLSNM 496
E +I N + V W + L AC HG ++ E AE L ++E + G+YVLLSN+
Sbjct: 526 EEMI----NMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNI 585
BLAST of CmoCh12G006630 vs. ExPASy Swiss-Prot
Match:
Q9SIL5 (Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E78 PE=2 SV=1)
HSP 1 Score: 366.7 bits (940), Expect = 4.2e-100
Identity = 185/491 (37.68%), Postives = 295/491 (60.08%), Query Frame = 0
Query: 5 KQAHAQVLTSGLGSNSFALSRLLDFCAEPRHGSLSHALKLYRHIQHPTICICNTMIKAFL 64
K+ +A ++ GL +SF +++++DFC + + +A +L+ + +P + + N++I+A+
Sbjct: 27 KKINASIIIHGLSQSSFMVTKMVDFC--DKIEDMDYATRLFNQVSNPNVFLYNSIIRAYT 86
Query: 65 LRGEFLNAIVIYSAMRRNEI-APDSYTHPYVLKACARIKKFHLGESVHACAVKLGFVLDV 124
+ + I IY + R PD +T P++ K+CA + +LG+ VH K G V
Sbjct: 87 HNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHV 146
Query: 125 FVGNSLLVMYCAFGNMRDAGQVFDEMPELSAVSWTVMIYGYAKMGDVNTARGLFDRAPIK 184
N+L+ MY F ++ DA +VFDEM E +SW ++ GYA++G + A+GLF K
Sbjct: 147 VTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDK 206
Query: 185 DRGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILCACAHMGALDIGIWIH 244
W AMISGY C+ E + FR MQL +EPDE ++++L +CA +G+L++G WIH
Sbjct: 207 TIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIH 266
Query: 245 RYLSHLELPLTLRVSTGLMDMYAKCGHLDMTRHLFDEMPQRDTICWNVMISGMAMHGDGE 304
Y V L++MY+KCG + LF +M +D I W+ MISG A HG+
Sbjct: 267 LYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAH 326
Query: 305 GALKLFKEMEKARIKPDDITFIAILAACSNSGMANEGLKILNKMCTIHKIEPKAEHYGCI 364
GA++ F EM++A++KP+ ITF+ +L+ACS+ GM EGL+ + M ++IEPK EHYGC+
Sbjct: 327 GAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCL 386
Query: 365 IDLLSRAGRFEEAEGVIQRLPNTATASEEAVAWRAFLSACCKHGEMQQAEGAAERLFELE 424
ID+L+RAG+ E A + + +P ++ W + LS+C G + A A + L ELE
Sbjct: 387 IDVLARAGKLERAVEITKTMP----MKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELE 446
Query: 425 -RHSGAYVLLSNMYAALGKHGDAKRVRKMMKLKGVEKVPGCSSIKLNGVVTEFIAGDKTH 484
G YVLL+N+YA LGK D R+RKM++ + ++K PG S I++N +V EF++GD +
Sbjct: 447 PEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNSK 506
Query: 485 IQIDDIHLVLE 494
+I +VL+
Sbjct: 507 PFWTEISIVLQ 511
BLAST of CmoCh12G006630 vs. ExPASy Swiss-Prot
Match:
Q9FJY7 (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)
HSP 1 Score: 349.7 bits (896), Expect = 5.4e-95
Identity = 189/489 (38.65%), Postives = 274/489 (56.03%), Query Frame = 0
Query: 2 KQLKQAHAQVLTSGLGSNSFALSRLLDFCAEPRHGS-LSHALKLYRHIQHPTICICNTMI 61
++LKQ HA++L +GL +S+A+++ L FC L +A ++ P + N MI
Sbjct: 28 EELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMI 87
Query: 62 KAFLLRGEFLNAIVIYSAMRRNEIAPDSYTHPYVLKACARIKKFHLGESVHACAVKLGFV 121
+ F E ++++Y M + ++YT P +LKAC+ + F +HA KLG+
Sbjct: 88 RGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYE 147
Query: 122 LDVFVGNSLLVMYCAFGNMRDAGQVFDEMPELSAVSWTVMIYGYAKMGDVNTARGLFDRA 181
DV+ NSL+ Y GN + A +FD +PE VSW +I GY K G ++ A LF +
Sbjct: 148 NDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKM 207
Query: 182 PIKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILCACAHMGALDIGI 241
K+ W MISGYVQ + KE L +F MQ ++VEPD + L ACA +GAL+ G
Sbjct: 208 AEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGK 267
Query: 242 WIHRYLSHLELPLTLRVSTGLMDMYAKCGHLDMTRHLFDEMPQRDTICWNVMISGMAMHG 301
WIH YL+ + + + L+DMYAKCG ++ +F + ++ W +ISG A HG
Sbjct: 268 WIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHG 327
Query: 302 DGEGALKLFKEMEKARIKPDDITFIAILAACSNSGMANEGLKILNKMCTIHKIEPKAEHY 361
G A+ F EM+K IKP+ ITF A+L ACS +G+ EG I M + ++P EHY
Sbjct: 328 HGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHY 387
Query: 362 GCIIDLLSRAGRFEEAEGVIQRLPNTATASEEAVAWRAFLSACCKHGEMQQAEGAAERLF 421
GCI+DLL RAG +EA+ IQ +P AV W A L AC H ++ E E L
Sbjct: 388 GCIVDLLGRAGLLDEAKRFIQEMP----LKPNAVIWGALLKACRIHKNIELGEEIGEILI 447
Query: 422 ELE-RHSGAYVLLSNMYAALGKHGDAKRVRKMMKLKGVEKVPGCSSIKLNGVVTEFIAGD 481
++ H G YV +N++A K A R++MK +GV KVPGCS+I L G EF+AGD
Sbjct: 448 AIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGD 507
Query: 482 KTHIQIDDI 489
++H +I+ I
Sbjct: 508 RSHPEIEKI 512
BLAST of CmoCh12G006630 vs. ExPASy Swiss-Prot
Match:
Q9FMA1 (Pentatricopeptide repeat-containing protein At5g56310 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E13 PE=2 SV=1)
HSP 1 Score: 340.9 bits (873), Expect = 2.5e-92
Identity = 180/505 (35.64%), Postives = 298/505 (59.01%), Query Frame = 0
Query: 1 MKQLKQAHAQVLTSGLGSNSFALSRLLDFCAEPRHGSLSHALKLYRHIQHPTICICNTMI 60
+K LKQ+H ++ +GL ++ +++ ++ C+ H L +A ++ H P + NTMI
Sbjct: 28 LKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGH--LRYAYSVFTHQPCPNTYLHNTMI 87
Query: 61 KAFLLRGE---FLNAIVIYSAMRRNEIAPDSYTHPYVLKACARIKKFHLGESVHACAVKL 120
+A L E AI +Y + PD++T P+VLK R+ G +H V
Sbjct: 88 RALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVF 147
Query: 121 GFVLDVFVGNSLLVMYCAFGNMRDAGQVFDEMPELSAVSWTVMIYGYAKMGDVNTARGLF 180
GF V V L+ MY + G + DA ++FDEM W ++ GY K+G+++ AR L
Sbjct: 148 GFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLL 207
Query: 181 DRAP--IKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILCACAHMGA 240
+ P +++ W +ISGY ++ E + +F+ M + VEPDE ++ +L ACA +G+
Sbjct: 208 EMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGS 267
Query: 241 LDIGIWIHRYLSHLELPLTLRVSTGLMDMYAKCGHLDMTRHLFDEMPQRDTICWNVMISG 300
L++G I Y+ H + + ++ ++DMYAK G++ +F+ + +R+ + W +I+G
Sbjct: 268 LELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAG 327
Query: 301 MAMHGDGEGALKLFKEMEKARIKPDDITFIAILAACSNSGMANEGLKILNKMCTIHKIEP 360
+A HG G AL +F M KA ++P+D+TFIAIL+ACS+ G + G ++ N M + + I P
Sbjct: 328 LATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHP 387
Query: 361 KAEHYGCIIDLLSRAGRFEEAEGVIQRLPNTATASEEAVAWRAFLSACCKHGEMQQAEGA 420
EHYGC+IDLL RAG+ EA+ VI+ +P A A+ W + L+A H +++ E A
Sbjct: 388 NIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAA----IWGSLLAASNVHHDLELGERA 447
Query: 421 AERLFELE-RHSGAYVLLSNMYAALGKHGDAKRVRKMMKLKGVEKVPGCSSIKLNGVVTE 480
L +LE +SG Y+LL+N+Y+ LG+ +++ +R MMK GV+K+ G SSI++ V +
Sbjct: 448 LSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVYK 507
Query: 481 FIAGDKTHIQIDDIHLVLEELNKQI 500
FI+GD TH Q++ IH +L+E++ QI
Sbjct: 508 FISGDLTHPQVERIHEILQEMDLQI 526
BLAST of CmoCh12G006630 vs. ExPASy Swiss-Prot
Match:
Q9LSB8 (Putative pentatricopeptide repeat-containing protein At3g15930 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E51 PE=3 SV=2)
HSP 1 Score: 340.1 bits (871), Expect = 4.3e-92
Identity = 180/498 (36.14%), Postives = 288/498 (57.83%), Query Frame = 0
Query: 5 KQAHAQVLTSGLGSNSF---ALSRLLDFCAEPRHGSLSHALKLYRHIQHPTICICNTMIK 64
K+ H V+ GLGSN + AL ++ C G + A ++ + N MI
Sbjct: 155 KKLHCHVVKFGLGSNLYVQNALVKMYSLC-----GLMDMARGVFDRRCKEDVFSWNLMIS 214
Query: 65 AFLLRGEFLNAIVIYSAMRRNEIAPDSYTHPYVLKACARIKKFHLGESVHACAVKLGFVL 124
+ E+ +I + M RN ++P S T VL AC+++K L + VH +
Sbjct: 215 GYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEP 274
Query: 125 DVFVGNSLLVMYCAFGNMRDAGQVFDEMPELSAVSWTVMIYGYAKMGDVNTARGLFDRAP 184
+ + N+L+ Y A G M A ++F M +SWT ++ GY + G++ AR FD+ P
Sbjct: 275 SLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMP 334
Query: 185 IKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILCACAHMGALDIGIW 244
++DR W MI GY++ CF E L +FR MQ + PDE +V++L ACAH+G+L+IG W
Sbjct: 335 VRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEW 394
Query: 245 IHRYLSHLELPLTLRVSTGLMDMYAKCGHLDMTRHLFDEMPQRDTICWNVMISGMAMHGD 304
I Y+ ++ + V L+DMY KCG + + +F +M QRD W M+ G+A +G
Sbjct: 395 IKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQ 454
Query: 305 GEGALKLFKEMEKARIKPDDITFIAILAACSNSGMANEGLKILNKMCTIHKIEPKAEHYG 364
G+ A+K+F +M+ I+PDDIT++ +L+AC++SGM ++ K KM + H+IEP HYG
Sbjct: 455 GQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYG 514
Query: 365 CIIDLLSRAGRFEEAEGVIQRLPNTATASEEAVAWRAFLSACCKHGEMQQAEGAAERLFE 424
C++D+L RAG +EA +++++P + ++ W A L A H + AE AA+++ E
Sbjct: 515 CMVDMLGRAGLVKEAYEILRKMP----MNPNSIVWGALLGASRLHNDEPMAELAAKKILE 574
Query: 425 LERHSGA-YVLLSNMYAALGKHGDAKRVRKMMKLKGVEKVPGCSSIKLNGVVTEFIAGDK 484
LE +GA Y LL N+YA + D + VR+ + ++K PG S I++NG EF+AGDK
Sbjct: 575 LEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDK 634
Query: 485 THIQIDDIHLVLEELNKQ 499
+H+Q ++I++ LEEL ++
Sbjct: 635 SHLQSEEIYMKLEELAQE 643
BLAST of CmoCh12G006630 vs. ExPASy TrEMBL
Match:
A0A6J1GK82 (pentatricopeptide repeat-containing protein At2g20540-like OS=Cucurbita moschata OX=3662 GN=LOC111454648 PE=4 SV=1)
HSP 1 Score: 1034.2 bits (2673), Expect = 1.7e-298
Identity = 507/507 (100.00%), Postives = 507/507 (100.00%), Query Frame = 0
Query: 1 MKQLKQAHAQVLTSGLGSNSFALSRLLDFCAEPRHGSLSHALKLYRHIQHPTICICNTMI 60
MKQLKQAHAQVLTSGLGSNSFALSRLLDFCAEPRHGSLSHALKLYRHIQHPTICICNTMI
Sbjct: 18 MKQLKQAHAQVLTSGLGSNSFALSRLLDFCAEPRHGSLSHALKLYRHIQHPTICICNTMI 77
Query: 61 KAFLLRGEFLNAIVIYSAMRRNEIAPDSYTHPYVLKACARIKKFHLGESVHACAVKLGFV 120
KAFLLRGEFLNAIVIYSAMRRNEIAPDSYTHPYVLKACARIKKFHLGESVHACAVKLGFV
Sbjct: 78 KAFLLRGEFLNAIVIYSAMRRNEIAPDSYTHPYVLKACARIKKFHLGESVHACAVKLGFV 137
Query: 121 LDVFVGNSLLVMYCAFGNMRDAGQVFDEMPELSAVSWTVMIYGYAKMGDVNTARGLFDRA 180
LDVFVGNSLLVMYCAFGNMRDAGQVFDEMPELSAVSWTVMIYGYAKMGDVNTARGLFDRA
Sbjct: 138 LDVFVGNSLLVMYCAFGNMRDAGQVFDEMPELSAVSWTVMIYGYAKMGDVNTARGLFDRA 197
Query: 181 PIKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILCACAHMGALDIGI 240
PIKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILCACAHMGALDIGI
Sbjct: 198 PIKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILCACAHMGALDIGI 257
Query: 241 WIHRYLSHLELPLTLRVSTGLMDMYAKCGHLDMTRHLFDEMPQRDTICWNVMISGMAMHG 300
WIHRYLSHLELPLTLRVSTGLMDMYAKCGHLDMTRHLFDEMPQRDTICWNVMISGMAMHG
Sbjct: 258 WIHRYLSHLELPLTLRVSTGLMDMYAKCGHLDMTRHLFDEMPQRDTICWNVMISGMAMHG 317
Query: 301 DGEGALKLFKEMEKARIKPDDITFIAILAACSNSGMANEGLKILNKMCTIHKIEPKAEHY 360
DGEGALKLFKEMEKARIKPDDITFIAILAACSNSGMANEGLKILNKMCTIHKIEPKAEHY
Sbjct: 318 DGEGALKLFKEMEKARIKPDDITFIAILAACSNSGMANEGLKILNKMCTIHKIEPKAEHY 377
Query: 361 GCIIDLLSRAGRFEEAEGVIQRLPNTATASEEAVAWRAFLSACCKHGEMQQAEGAAERLF 420
GCIIDLLSRAGRFEEAEGVIQRLPNTATASEEAVAWRAFLSACCKHGEMQQAEGAAERLF
Sbjct: 378 GCIIDLLSRAGRFEEAEGVIQRLPNTATASEEAVAWRAFLSACCKHGEMQQAEGAAERLF 437
Query: 421 ELERHSGAYVLLSNMYAALGKHGDAKRVRKMMKLKGVEKVPGCSSIKLNGVVTEFIAGDK 480
ELERHSGAYVLLSNMYAALGKHGDAKRVRKMMKLKGVEKVPGCSSIKLNGVVTEFIAGDK
Sbjct: 438 ELERHSGAYVLLSNMYAALGKHGDAKRVRKMMKLKGVEKVPGCSSIKLNGVVTEFIAGDK 497
Query: 481 THIQIDDIHLVLEELNKQISQPDLLYF 508
THIQIDDIHLVLEELNKQISQPDLLYF
Sbjct: 498 THIQIDDIHLVLEELNKQISQPDLLYF 524
BLAST of CmoCh12G006630 vs. ExPASy TrEMBL
Match:
A0A6J1I746 (pentatricopeptide repeat-containing protein At2g20540-like OS=Cucurbita maxima OX=3661 GN=LOC111471855 PE=4 SV=1)
HSP 1 Score: 1005.0 bits (2597), Expect = 1.1e-289
Identity = 490/507 (96.65%), Postives = 502/507 (99.01%), Query Frame = 0
Query: 1 MKQLKQAHAQVLTSGLGSNSFALSRLLDFCAEPRHGSLSHALKLYRHIQHPTICICNTMI 60
MKQLKQAHAQVLTSGLGSNSFALSR+LDFCAEPRHGSLSHALKL++HIQHPTICICNTMI
Sbjct: 18 MKQLKQAHAQVLTSGLGSNSFALSRVLDFCAEPRHGSLSHALKLFQHIQHPTICICNTMI 77
Query: 61 KAFLLRGEFLNAIVIYSAMRRNEIAPDSYTHPYVLKACARIKKFHLGESVHACAVKLGFV 120
KAFLLRGEFLNAIV+YSAMRRN IAPDSYTHPYVLKACARIKKFHLGESVHACAVKLGFV
Sbjct: 78 KAFLLRGEFLNAIVMYSAMRRNGIAPDSYTHPYVLKACARIKKFHLGESVHACAVKLGFV 137
Query: 121 LDVFVGNSLLVMYCAFGNMRDAGQVFDEMPELSAVSWTVMIYGYAKMGDVNTARGLFDRA 180
+DVFVGNSLLVMYCAFGNM+DAGQ+FDEMPELSAVSWTVMIYGYAKMGDVNTARGLFDRA
Sbjct: 138 MDVFVGNSLLVMYCAFGNMKDAGQMFDEMPELSAVSWTVMIYGYAKMGDVNTARGLFDRA 197
Query: 181 PIKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILCACAHMGALDIGI 240
PIKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILCACAHMGALD+GI
Sbjct: 198 PIKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILCACAHMGALDVGI 257
Query: 241 WIHRYLSHLELPLTLRVSTGLMDMYAKCGHLDMTRHLFDEMPQRDTICWNVMISGMAMHG 300
WIHRYLSHLELPLTLRVSTGLMDMYAKCGHLDMTR+LFDEMPQRDTICWNVMISGMAMHG
Sbjct: 258 WIHRYLSHLELPLTLRVSTGLMDMYAKCGHLDMTRYLFDEMPQRDTICWNVMISGMAMHG 317
Query: 301 DGEGALKLFKEMEKARIKPDDITFIAILAACSNSGMANEGLKILNKMCTIHKIEPKAEHY 360
DGEGALKLFKEMEKARIKPDDITFIAILAACSNSGMANEGLKILNKM TIHKIEPKAEHY
Sbjct: 318 DGEGALKLFKEMEKARIKPDDITFIAILAACSNSGMANEGLKILNKMSTIHKIEPKAEHY 377
Query: 361 GCIIDLLSRAGRFEEAEGVIQRLPNTATASEEAVAWRAFLSACCKHGEMQQAEGAAERLF 420
GCIIDLLSRAGRFEEAEGVIQRLPNTATASEEAVAWRAFLSACCKHGEMQQAEGAAERLF
Sbjct: 378 GCIIDLLSRAGRFEEAEGVIQRLPNTATASEEAVAWRAFLSACCKHGEMQQAEGAAERLF 437
Query: 421 ELERHSGAYVLLSNMYAALGKHGDAKRVRKMMKLKGVEKVPGCSSIKLNGVVTEFIAGDK 480
ELERHSGAYVLLSNMYAALGKHGDAKRVRKMMKLKGVEKVPGCSSIK+NGVVTEFIAGDK
Sbjct: 438 ELERHSGAYVLLSNMYAALGKHGDAKRVRKMMKLKGVEKVPGCSSIKVNGVVTEFIAGDK 497
Query: 481 THIQIDDIHLVLEELNKQISQPDLLYF 508
TH+QI DIHLVLE L+KQISQPD LYF
Sbjct: 498 THLQIGDIHLVLEVLSKQISQPDRLYF 524
BLAST of CmoCh12G006630 vs. ExPASy TrEMBL
Match:
A0A0A0KNK8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G485180 PE=4 SV=1)
HSP 1 Score: 830.5 bits (2144), Expect = 3.8e-237
Identity = 405/504 (80.36%), Postives = 447/504 (88.69%), Query Frame = 0
Query: 1 MKQLKQAHAQVLTSGLGSNSFALSRLLDFCAEPRHGSLSHALKLYRHIQHPTICICNTMI 60
M QLKQAHAQVL SGL +++F LSRLL+FCAE R+GSLSHA KL++HIQHPTICI NTMI
Sbjct: 18 MNQLKQAHAQVLKSGLHNSNFVLSRLLNFCAESRNGSLSHAFKLFQHIQHPTICIFNTMI 77
Query: 61 KAFLLRGEFLNAIVIYSAMRRNEIAPDSYTHPYVLKACARIKKFHLGESVHACAVKLGFV 120
KA LLRGEFLNAI ++SA+ RN I PD+YT PYVLKA AR+ HLGES+HAC +KLG
Sbjct: 78 KALLLRGEFLNAIAVFSAIFRNGIHPDTYTLPYVLKASARMTNIHLGESIHACTIKLGSA 137
Query: 121 LDVFVGNSLLVMYCAFGNMRDAGQVFDEMPELSAVSWTVMIYGYAKMGDVNTARGLFDRA 180
++ FVGNSLLVMY +F NMR A QVFDEMPELSAVSWTVMIYGYA MGDV+TAR LFD A
Sbjct: 138 VNEFVGNSLLVMYRSFDNMRSARQVFDEMPELSAVSWTVMIYGYANMGDVDTARELFDMA 197
Query: 181 PIKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILCACAHMGALDIGI 240
+KD GIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTIL ACAHMGALD GI
Sbjct: 198 TVKDTGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILSACAHMGALDTGI 257
Query: 241 WIHRYLSHLELPLTLRVSTGLMDMYAKCGHLDMTRHLFDEMPQRDTICWNVMISGMAMHG 300
WIHRYL L LPLTLRVSTGL+DMYAKCGHLD+ ++LF+EM QRD +CWN MISGMAM G
Sbjct: 258 WIHRYLGRLGLPLTLRVSTGLIDMYAKCGHLDLAKYLFNEMSQRDNVCWNAMISGMAMDG 317
Query: 301 DGEGALKLFKEMEKARIKPDDITFIAILAACSNSGMANEGLKILNKMCTIHKIEPKAEHY 360
DGEGA+KLF EMEKA IKPD+ITFIA+LAACSNSGM +EG++I N+M T+HKIEPK+EHY
Sbjct: 318 DGEGAIKLFMEMEKAGIKPDNITFIAVLAACSNSGMVDEGIRIWNRMSTVHKIEPKSEHY 377
Query: 361 GCIIDLLSRAGRFEEAEGVIQRLPNTATASEEAVAWRAFLSACCKHGEMQQAEGAAERLF 420
GC+IDLLSR GRFEEAEGVIQRLP TA+ SEEAVAWRAFLSACCKHG+ QQAE AAERLF
Sbjct: 378 GCVIDLLSRVGRFEEAEGVIQRLPKTASPSEEAVAWRAFLSACCKHGQTQQAEVAAERLF 437
Query: 421 ELERHSGAYVLLSNMYAALGKHGDAKRVRKMMKLKGVEKVPGCSSIKLNGVVTEFIAGDK 480
+LERHSGAYVLLSNMYAALGKH DAKRVR MMKLKGVEKVPGCSSIK+NGVV EFIAG+K
Sbjct: 438 QLERHSGAYVLLSNMYAALGKHEDAKRVRNMMKLKGVEKVPGCSSIKVNGVVNEFIAGEK 497
Query: 481 THIQIDDIHLVLEELNKQISQPDL 505
TH ID+IHLVLEELNKQI + DL
Sbjct: 498 THRHIDNIHLVLEELNKQIVEADL 521
BLAST of CmoCh12G006630 vs. ExPASy TrEMBL
Match:
A0A1S4E5C9 (pentatricopeptide repeat-containing protein At2g20540-like OS=Cucumis melo OX=3656 GN=LOC103503327 PE=4 SV=1)
HSP 1 Score: 824.3 bits (2128), Expect = 2.7e-235
Identity = 403/504 (79.96%), Postives = 442/504 (87.70%), Query Frame = 0
Query: 1 MKQLKQAHAQVLTSGLGSNSFALSRLLDFCAEPRHGSLSHALKLYRHIQHPTICICNTMI 60
M LKQAHAQVLTSGL +++F LS+LL+FCAE R+GSLSHA KL++HIQHPTICICNTMI
Sbjct: 18 MNHLKQAHAQVLTSGLHNSNFVLSKLLNFCAESRNGSLSHAFKLFQHIQHPTICICNTMI 77
Query: 61 KAFLLRGEFLNAIVIYSAMRRNEIAPDSYTHPYVLKACARIKKFHLGESVHACAVKLGFV 120
KA LLRGEFLNAIV++SAM RN I PD+YT PYVLKA AR+ HLGES+HAC +KLGF
Sbjct: 78 KALLLRGEFLNAIVVFSAMFRNGIHPDTYTLPYVLKASARMTNIHLGESIHACTIKLGFA 137
Query: 121 LDVFVGNSLLVMYCAFGNMRDAGQVFDEMPELSAVSWTVMIYGYAKMGDVNTARGLFDRA 180
+D FVGNSLLVMY +F M A QVFDEMPELSAVSWTVMIYGYA MGDV+TAR LFD A
Sbjct: 138 VDEFVGNSLLVMYRSFDKMTSARQVFDEMPELSAVSWTVMIYGYANMGDVDTARELFDMA 197
Query: 181 PIKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILCACAHMGALDIGI 240
+KD GIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTIL ACAHMGALD GI
Sbjct: 198 TVKDTGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILSACAHMGALDTGI 257
Query: 241 WIHRYLSHLELPLTLRVSTGLMDMYAKCGHLDMTRHLFDEMPQRDTICWNVMISGMAMHG 300
WIHRYL L L LTLRV TGL+DMYAKCGHLD+ ++LF+EM QRD +CWN MISGMAM G
Sbjct: 258 WIHRYLGRLGLSLTLRVRTGLIDMYAKCGHLDLAKYLFNEMSQRDNVCWNAMISGMAMDG 317
Query: 301 DGEGALKLFKEMEKARIKPDDITFIAILAACSNSGMANEGLKILNKMCTIHKIEPKAEHY 360
DGEGA+KLF EMEKA IKPD+ITFIA+LAACSNSGM +EG++I N+M TIHKIEPK+EHY
Sbjct: 318 DGEGAIKLFMEMEKAGIKPDNITFIAVLAACSNSGMVDEGIRIWNRMSTIHKIEPKSEHY 377
Query: 361 GCIIDLLSRAGRFEEAEGVIQRLPNTATASEEAVAWRAFLSACCKHGEMQQAEGAAERLF 420
GC+IDLLSR GRFEEAE VI RLP TA SEEAVAWRAFLSACCKHG+ QQAE AAERLF
Sbjct: 378 GCVIDLLSRVGRFEEAEAVILRLPKTANPSEEAVAWRAFLSACCKHGQTQQAEVAAERLF 437
Query: 421 ELERHSGAYVLLSNMYAALGKHGDAKRVRKMMKLKGVEKVPGCSSIKLNGVVTEFIAGDK 480
+LERHSGAYVLLSNMYAALGKH DAKRVR MMKLKGVEKVPGCSSIK+NGVV EFIAG+K
Sbjct: 438 QLERHSGAYVLLSNMYAALGKHEDAKRVRNMMKLKGVEKVPGCSSIKVNGVVNEFIAGEK 497
Query: 481 THIQIDDIHLVLEELNKQISQPDL 505
TH I +IHLVLEELNKQI + DL
Sbjct: 498 THRYIGNIHLVLEELNKQIVEADL 521
BLAST of CmoCh12G006630 vs. ExPASy TrEMBL
Match:
A0A5D3DJ94 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold278G00090 PE=4 SV=1)
HSP 1 Score: 822.8 bits (2124), Expect = 8.0e-235
Identity = 402/504 (79.76%), Postives = 441/504 (87.50%), Query Frame = 0
Query: 1 MKQLKQAHAQVLTSGLGSNSFALSRLLDFCAEPRHGSLSHALKLYRHIQHPTICICNTMI 60
M LKQAHAQVLTSGL +++F LS+LL+FCAE R+GSLSHA KL++HIQHPTICICNTMI
Sbjct: 18 MNHLKQAHAQVLTSGLHNSNFVLSKLLNFCAESRNGSLSHAFKLFQHIQHPTICICNTMI 77
Query: 61 KAFLLRGEFLNAIVIYSAMRRNEIAPDSYTHPYVLKACARIKKFHLGESVHACAVKLGFV 120
KA LLRGEFLNAIV++SAM RN I PD+YT PYVLKA AR+ HLGES+HAC +KLGF
Sbjct: 78 KALLLRGEFLNAIVVFSAMFRNGIHPDTYTLPYVLKASARMTNIHLGESIHACTIKLGFA 137
Query: 121 LDVFVGNSLLVMYCAFGNMRDAGQVFDEMPELSAVSWTVMIYGYAKMGDVNTARGLFDRA 180
+D FVGNSLLVMY +F M A QVFDEMPELSAVSWTVMIYGYA MGDV+TAR LFD A
Sbjct: 138 VDEFVGNSLLVMYRSFDKMTSARQVFDEMPELSAVSWTVMIYGYANMGDVDTARELFDMA 197
Query: 181 PIKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILCACAHMGALDIGI 240
+KD GIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTIL ACAHMGA D GI
Sbjct: 198 TVKDTGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILSACAHMGAFDTGI 257
Query: 241 WIHRYLSHLELPLTLRVSTGLMDMYAKCGHLDMTRHLFDEMPQRDTICWNVMISGMAMHG 300
WIHRYL L L LTLRV TGL+DMYAKCGHLD+ ++LF+EM QRD +CWN MISGMAM G
Sbjct: 258 WIHRYLGRLGLSLTLRVRTGLIDMYAKCGHLDLAKYLFNEMSQRDNVCWNAMISGMAMDG 317
Query: 301 DGEGALKLFKEMEKARIKPDDITFIAILAACSNSGMANEGLKILNKMCTIHKIEPKAEHY 360
DGEGA+KLF EMEKA IKPD+ITFIA+LAACSNSGM +EG++I N+M TIHKIEPK+EHY
Sbjct: 318 DGEGAIKLFMEMEKAGIKPDNITFIAVLAACSNSGMVDEGIRIWNRMSTIHKIEPKSEHY 377
Query: 361 GCIIDLLSRAGRFEEAEGVIQRLPNTATASEEAVAWRAFLSACCKHGEMQQAEGAAERLF 420
GC+IDLLSR GRFEEAE VI RLP TA SEEAVAWRAFLSACCKHG+ QQAE AAERLF
Sbjct: 378 GCVIDLLSRVGRFEEAEAVILRLPKTANPSEEAVAWRAFLSACCKHGQTQQAEVAAERLF 437
Query: 421 ELERHSGAYVLLSNMYAALGKHGDAKRVRKMMKLKGVEKVPGCSSIKLNGVVTEFIAGDK 480
+LERHSGAYVLLSNMYAALGKH DAKRVR MMKLKGVEKVPGCSSIK+NGVV EFIAG+K
Sbjct: 438 QLERHSGAYVLLSNMYAALGKHEDAKRVRNMMKLKGVEKVPGCSSIKVNGVVNEFIAGEK 497
Query: 481 THIQIDDIHLVLEELNKQISQPDL 505
TH I +IHLVLEELNKQI + DL
Sbjct: 498 THRYIGNIHLVLEELNKQIVEADL 521
BLAST of CmoCh12G006630 vs. TAIR 10
Match:
AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 374.0 bits (959), Expect = 1.9e-103
Identity = 213/600 (35.50%), Postives = 311/600 (51.83%), Query Frame = 0
Query: 1 MKQLKQAHAQVLTSGLGSNSFALSRLLDFC-AEPRHGSLSHALKLYRHIQHPTICICNTM 60
++ L+ HAQ++ GL + ++ALS+L++FC P L +A+ +++ IQ P + I NTM
Sbjct: 46 LQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTM 105
Query: 61 IKAFLLRGEFLNAIVIYSAMRRNEIAPDSYTHPYVLKACARIKKFHLGESVHACAVKLGF 120
+ L + ++A+ +Y M + P+SYT P+VLK+CA+ K F G+ +H +KLG
Sbjct: 106 FRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGC 165
Query: 121 VLDVFVGNSLLVMYCAFGNMRDAGQVFDEMPELSAVSWTVMIYGYAKMGDVNTARGLFDR 180
LD++V SL+ MY G + DA +VFD+ P VS+T +I GYA G + A+ LFD
Sbjct: 166 DLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDE 225
Query: 181 APIKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVT-------------- 240
P+KD W AMISGY + +KE L +F+ M T V PDE+ +VT
Sbjct: 226 IPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELG 285
Query: 241 ------------------------------------------------------------ 300
Sbjct: 286 RQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHM 345
Query: 301 ---------------------------ILCACAHMGALDIGIWIHRYLSHLELPLTLRVS 360
IL ACAH+GA+DIG WIH Y+ +T S
Sbjct: 346 NLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASS 405
Query: 361 --TGLMDMYAKCGHLDMTRHLFDEMPQRDTICWNVMISGMAMHGDGEGALKLFKEMEKAR 420
T L+DMYAKCG ++ +F+ + + WN MI G AMHG + + LF M K
Sbjct: 406 LRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIG 465
Query: 421 IKPDDITFIAILAACSNSGMANEGLKILNKMCTIHKIEPKAEHYGCIIDLLSRAGRFEEA 480
I+PDDITF+ +L+ACS+SGM + G I M +K+ PK EHYGC+IDLL +G F+EA
Sbjct: 466 IQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEA 525
Query: 481 EGVIQRLPNTATASEEAVAWRAFLSACCKHGEMQQAEGAAERLFELE-RHSGAYVLLSNM 496
E +I N + V W + L AC HG ++ E AE L ++E + G+YVLLSN+
Sbjct: 526 EEMI----NMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNI 585
BLAST of CmoCh12G006630 vs. TAIR 10
Match:
AT2G20540.1 (mitochondrial editing factor 21 )
HSP 1 Score: 366.7 bits (940), Expect = 3.0e-101
Identity = 185/491 (37.68%), Postives = 295/491 (60.08%), Query Frame = 0
Query: 5 KQAHAQVLTSGLGSNSFALSRLLDFCAEPRHGSLSHALKLYRHIQHPTICICNTMIKAFL 64
K+ +A ++ GL +SF +++++DFC + + +A +L+ + +P + + N++I+A+
Sbjct: 27 KKINASIIIHGLSQSSFMVTKMVDFC--DKIEDMDYATRLFNQVSNPNVFLYNSIIRAYT 86
Query: 65 LRGEFLNAIVIYSAMRRNEI-APDSYTHPYVLKACARIKKFHLGESVHACAVKLGFVLDV 124
+ + I IY + R PD +T P++ K+CA + +LG+ VH K G V
Sbjct: 87 HNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHV 146
Query: 125 FVGNSLLVMYCAFGNMRDAGQVFDEMPELSAVSWTVMIYGYAKMGDVNTARGLFDRAPIK 184
N+L+ MY F ++ DA +VFDEM E +SW ++ GYA++G + A+GLF K
Sbjct: 147 VTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDK 206
Query: 185 DRGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILCACAHMGALDIGIWIH 244
W AMISGY C+ E + FR MQL +EPDE ++++L +CA +G+L++G WIH
Sbjct: 207 TIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIH 266
Query: 245 RYLSHLELPLTLRVSTGLMDMYAKCGHLDMTRHLFDEMPQRDTICWNVMISGMAMHGDGE 304
Y V L++MY+KCG + LF +M +D I W+ MISG A HG+
Sbjct: 267 LYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAH 326
Query: 305 GALKLFKEMEKARIKPDDITFIAILAACSNSGMANEGLKILNKMCTIHKIEPKAEHYGCI 364
GA++ F EM++A++KP+ ITF+ +L+ACS+ GM EGL+ + M ++IEPK EHYGC+
Sbjct: 327 GAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCL 386
Query: 365 IDLLSRAGRFEEAEGVIQRLPNTATASEEAVAWRAFLSACCKHGEMQQAEGAAERLFELE 424
ID+L+RAG+ E A + + +P ++ W + LS+C G + A A + L ELE
Sbjct: 387 IDVLARAGKLERAVEITKTMP----MKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELE 446
Query: 425 -RHSGAYVLLSNMYAALGKHGDAKRVRKMMKLKGVEKVPGCSSIKLNGVVTEFIAGDKTH 484
G YVLL+N+YA LGK D R+RKM++ + ++K PG S I++N +V EF++GD +
Sbjct: 447 PEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNSK 506
Query: 485 IQIDDIHLVLE 494
+I +VL+
Sbjct: 507 PFWTEISIVLQ 511
BLAST of CmoCh12G006630 vs. TAIR 10
Match:
AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 349.7 bits (896), Expect = 3.8e-96
Identity = 189/489 (38.65%), Postives = 274/489 (56.03%), Query Frame = 0
Query: 2 KQLKQAHAQVLTSGLGSNSFALSRLLDFCAEPRHGS-LSHALKLYRHIQHPTICICNTMI 61
++LKQ HA++L +GL +S+A+++ L FC L +A ++ P + N MI
Sbjct: 28 EELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMI 87
Query: 62 KAFLLRGEFLNAIVIYSAMRRNEIAPDSYTHPYVLKACARIKKFHLGESVHACAVKLGFV 121
+ F E ++++Y M + ++YT P +LKAC+ + F +HA KLG+
Sbjct: 88 RGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYE 147
Query: 122 LDVFVGNSLLVMYCAFGNMRDAGQVFDEMPELSAVSWTVMIYGYAKMGDVNTARGLFDRA 181
DV+ NSL+ Y GN + A +FD +PE VSW +I GY K G ++ A LF +
Sbjct: 148 NDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKM 207
Query: 182 PIKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILCACAHMGALDIGI 241
K+ W MISGYVQ + KE L +F MQ ++VEPD + L ACA +GAL+ G
Sbjct: 208 AEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGK 267
Query: 242 WIHRYLSHLELPLTLRVSTGLMDMYAKCGHLDMTRHLFDEMPQRDTICWNVMISGMAMHG 301
WIH YL+ + + + L+DMYAKCG ++ +F + ++ W +ISG A HG
Sbjct: 268 WIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHG 327
Query: 302 DGEGALKLFKEMEKARIKPDDITFIAILAACSNSGMANEGLKILNKMCTIHKIEPKAEHY 361
G A+ F EM+K IKP+ ITF A+L ACS +G+ EG I M + ++P EHY
Sbjct: 328 HGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHY 387
Query: 362 GCIIDLLSRAGRFEEAEGVIQRLPNTATASEEAVAWRAFLSACCKHGEMQQAEGAAERLF 421
GCI+DLL RAG +EA+ IQ +P AV W A L AC H ++ E E L
Sbjct: 388 GCIVDLLGRAGLLDEAKRFIQEMP----LKPNAVIWGALLKACRIHKNIELGEEIGEILI 447
Query: 422 ELE-RHSGAYVLLSNMYAALGKHGDAKRVRKMMKLKGVEKVPGCSSIKLNGVVTEFIAGD 481
++ H G YV +N++A K A R++MK +GV KVPGCS+I L G EF+AGD
Sbjct: 448 AIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGD 507
Query: 482 KTHIQIDDI 489
++H +I+ I
Sbjct: 508 RSHPEIEKI 512
BLAST of CmoCh12G006630 vs. TAIR 10
Match:
AT5G56310.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 340.9 bits (873), Expect = 1.8e-93
Identity = 180/505 (35.64%), Postives = 298/505 (59.01%), Query Frame = 0
Query: 1 MKQLKQAHAQVLTSGLGSNSFALSRLLDFCAEPRHGSLSHALKLYRHIQHPTICICNTMI 60
+K LKQ+H ++ +GL ++ +++ ++ C+ H L +A ++ H P + NTMI
Sbjct: 28 LKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGH--LRYAYSVFTHQPCPNTYLHNTMI 87
Query: 61 KAFLLRGE---FLNAIVIYSAMRRNEIAPDSYTHPYVLKACARIKKFHLGESVHACAVKL 120
+A L E AI +Y + PD++T P+VLK R+ G +H V
Sbjct: 88 RALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVF 147
Query: 121 GFVLDVFVGNSLLVMYCAFGNMRDAGQVFDEMPELSAVSWTVMIYGYAKMGDVNTARGLF 180
GF V V L+ MY + G + DA ++FDEM W ++ GY K+G+++ AR L
Sbjct: 148 GFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLL 207
Query: 181 DRAP--IKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILCACAHMGA 240
+ P +++ W +ISGY ++ E + +F+ M + VEPDE ++ +L ACA +G+
Sbjct: 208 EMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGS 267
Query: 241 LDIGIWIHRYLSHLELPLTLRVSTGLMDMYAKCGHLDMTRHLFDEMPQRDTICWNVMISG 300
L++G I Y+ H + + ++ ++DMYAK G++ +F+ + +R+ + W +I+G
Sbjct: 268 LELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAG 327
Query: 301 MAMHGDGEGALKLFKEMEKARIKPDDITFIAILAACSNSGMANEGLKILNKMCTIHKIEP 360
+A HG G AL +F M KA ++P+D+TFIAIL+ACS+ G + G ++ N M + + I P
Sbjct: 328 LATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHP 387
Query: 361 KAEHYGCIIDLLSRAGRFEEAEGVIQRLPNTATASEEAVAWRAFLSACCKHGEMQQAEGA 420
EHYGC+IDLL RAG+ EA+ VI+ +P A A+ W + L+A H +++ E A
Sbjct: 388 NIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAA----IWGSLLAASNVHHDLELGERA 447
Query: 421 AERLFELE-RHSGAYVLLSNMYAALGKHGDAKRVRKMMKLKGVEKVPGCSSIKLNGVVTE 480
L +LE +SG Y+LL+N+Y+ LG+ +++ +R MMK GV+K+ G SSI++ V +
Sbjct: 448 LSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVYK 507
Query: 481 FIAGDKTHIQIDDIHLVLEELNKQI 500
FI+GD TH Q++ IH +L+E++ QI
Sbjct: 508 FISGDLTHPQVERIHEILQEMDLQI 526
BLAST of CmoCh12G006630 vs. TAIR 10
Match:
AT3G15930.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 340.1 bits (871), Expect = 3.0e-93
Identity = 180/498 (36.14%), Postives = 288/498 (57.83%), Query Frame = 0
Query: 5 KQAHAQVLTSGLGSNSF---ALSRLLDFCAEPRHGSLSHALKLYRHIQHPTICICNTMIK 64
K+ H V+ GLGSN + AL ++ C G + A ++ + N MI
Sbjct: 155 KKLHCHVVKFGLGSNLYVQNALVKMYSLC-----GLMDMARGVFDRRCKEDVFSWNLMIS 214
Query: 65 AFLLRGEFLNAIVIYSAMRRNEIAPDSYTHPYVLKACARIKKFHLGESVHACAVKLGFVL 124
+ E+ +I + M RN ++P S T VL AC+++K L + VH +
Sbjct: 215 GYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEP 274
Query: 125 DVFVGNSLLVMYCAFGNMRDAGQVFDEMPELSAVSWTVMIYGYAKMGDVNTARGLFDRAP 184
+ + N+L+ Y A G M A ++F M +SWT ++ GY + G++ AR FD+ P
Sbjct: 275 SLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMP 334
Query: 185 IKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILCACAHMGALDIGIW 244
++DR W MI GY++ CF E L +FR MQ + PDE +V++L ACAH+G+L+IG W
Sbjct: 335 VRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEW 394
Query: 245 IHRYLSHLELPLTLRVSTGLMDMYAKCGHLDMTRHLFDEMPQRDTICWNVMISGMAMHGD 304
I Y+ ++ + V L+DMY KCG + + +F +M QRD W M+ G+A +G
Sbjct: 395 IKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQ 454
Query: 305 GEGALKLFKEMEKARIKPDDITFIAILAACSNSGMANEGLKILNKMCTIHKIEPKAEHYG 364
G+ A+K+F +M+ I+PDDIT++ +L+AC++SGM ++ K KM + H+IEP HYG
Sbjct: 455 GQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYG 514
Query: 365 CIIDLLSRAGRFEEAEGVIQRLPNTATASEEAVAWRAFLSACCKHGEMQQAEGAAERLFE 424
C++D+L RAG +EA +++++P + ++ W A L A H + AE AA+++ E
Sbjct: 515 CMVDMLGRAGLVKEAYEILRKMP----MNPNSIVWGALLGASRLHNDEPMAELAAKKILE 574
Query: 425 LERHSGA-YVLLSNMYAALGKHGDAKRVRKMMKLKGVEKVPGCSSIKLNGVVTEFIAGDK 484
LE +GA Y LL N+YA + D + VR+ + ++K PG S I++NG EF+AGDK
Sbjct: 575 LEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDK 634
Query: 485 THIQIDDIHLVLEELNKQ 499
+H+Q ++I++ LEEL ++
Sbjct: 635 SHLQSEEIYMKLEELAQE 643
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9LN01 | 2.7e-102 | 35.50 | Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... | [more] |
Q9SIL5 | 4.2e-100 | 37.68 | Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX... | [more] |
Q9FJY7 | 5.4e-95 | 38.65 | Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX... | [more] |
Q9FMA1 | 2.5e-92 | 35.64 | Pentatricopeptide repeat-containing protein At5g56310 OS=Arabidopsis thaliana OX... | [more] |
Q9LSB8 | 4.3e-92 | 36.14 | Putative pentatricopeptide repeat-containing protein At3g15930 OS=Arabidopsis th... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1GK82 | 1.7e-298 | 100.00 | pentatricopeptide repeat-containing protein At2g20540-like OS=Cucurbita moschata... | [more] |
A0A6J1I746 | 1.1e-289 | 96.65 | pentatricopeptide repeat-containing protein At2g20540-like OS=Cucurbita maxima O... | [more] |
A0A0A0KNK8 | 3.8e-237 | 80.36 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G485180 PE=4 SV=1 | [more] |
A0A1S4E5C9 | 2.7e-235 | 79.96 | pentatricopeptide repeat-containing protein At2g20540-like OS=Cucumis melo OX=36... | [more] |
A0A5D3DJ94 | 8.0e-235 | 79.76 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
Match Name | E-value | Identity | Description | |
AT1G08070.1 | 1.9e-103 | 35.50 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT2G20540.1 | 3.0e-101 | 37.68 | mitochondrial editing factor 21 | [more] |
AT5G66520.1 | 3.8e-96 | 38.65 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT5G56310.1 | 1.8e-93 | 35.64 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G15930.1 | 3.0e-93 | 36.14 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |