CmoCh12G006630 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh12G006630
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionPentatricopeptide repeat-containing protein
LocationCmo_Chr12: 4346379 .. 4347902 (-)
RNA-Seq ExpressionCmoCh12G006630
SyntenyCmoCh12G006630
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGCAGCTAAAGCAAGCTCATGCGCAGGTTCTTACATCTGGACTCGGCAGCAACAGCTTCGCGTTAAGCAGATTGTTGGATTTTTGTGCAGAACCACGCCATGGCAGCCTTTCTCATGCATTGAAACTCTACCGACACATTCAACACCCAACCATTTGCATCTGCAACACCATGATCAAAGCCTTTCTTCTACGAGGTGAATTTCTCAACGCCATTGTTATATACTCTGCAATGCGAAGAAATGAGATCGCCCCTGATAGTTATACTCATCCTTACGTTCTAAAAGCTTGCGCGAGGATTAAAAAATTTCATCTCGGAGAGTCGGTTCATGCTTGTGCTGTGAAATTGGGTTTTGTATTGGATGTATTTGTGGGTAATTCTTTGCTTGTTATGTATTGCGCGTTCGGTAACATGAGAGATGCAGGACAGGTGTTCGACGAAATGCCTGAGCTAAGTGCTGTGTCGTGGACGGTTATGATTTACGGGTATGCAAAGATGGGTGATGTGAACACCGCAAGAGGATTGTTTGACCGAGCTCCAATCAAAGATAGGGGAATATGGGGCGCCATGATATCTGGGTATGTGCAAAACAATTGCTTCAAGGAGGGGCTGCACATGTTTCGTCTGATGCAACTGACTGAAGTAGAGCCTGATGAAGCCATAATTGTGACAATCCTTTGTGCTTGCGCTCACATGGGAGCTCTTGACATTGGGATTTGGATTCACAGGTATTTGAGTCATCTCGAATTGCCATTAACTCTGCGAGTGAGCACTGGGTTGATGGATATGTATGCAAAATGTGGGCATCTAGACATGACCAGGCACCTGTTCGATGAAATGCCGCAGAGAGATACCATTTGTTGGAACGTAATGATTTCAGGAATGGCAATGCATGGAGATGGAGAAGGCGCACTGAAGCTCTTCAAGGAGATGGAGAAGGCAAGAATCAAGCCGGATGACATAACATTCATAGCCATTTTGGCAGCTTGTAGCAACTCAGGCATGGCCAATGAAGGCTTGAAGATACTGAACAAAATGTGTACAATACACAAAATTGAGCCAAAAGCTGAACACTACGGGTGTATAATCGACCTGCTGAGTCGAGCTGGGCGGTTCGAGGAAGCGGAGGGAGTGATACAGAGACTTCCAAACACAGCCACTGCTTCAGAGGAAGCAGTGGCTTGGAGGGCTTTTCTGAGTGCTTGCTGTAAGCATGGGGAAATGCAGCAGGCTGAGGGTGCTGCTGAGAGGCTGTTTGAATTGGAAAGACATAGTGGGGCTTACGTTTTACTGTCGAATATGTATGCTGCTCTGGGGAAGCATGGGGATGCTAAAAGAGTGAGGAAGATGATGAAGTTGAAAGGGGTTGAGAAGGTACCTGGTTGCAGCTCCATTAAACTCAATGGAGTTGTCACTGAGTTCATTGCAGGGGATAAAACCCACATCCAAATTGATGATATTCACTTGGTTTTGGAAGAGTTGAATAAACAAATTTCTCAGCCTGATCTTTTATATTTCTAA

mRNA sequence

ATGAAGCAGCTAAAGCAAGCTCATGCGCAGGTTCTTACATCTGGACTCGGCAGCAACAGCTTCGCGTTAAGCAGATTGTTGGATTTTTGTGCAGAACCACGCCATGGCAGCCTTTCTCATGCATTGAAACTCTACCGACACATTCAACACCCAACCATTTGCATCTGCAACACCATGATCAAAGCCTTTCTTCTACGAGGTGAATTTCTCAACGCCATTGTTATATACTCTGCAATGCGAAGAAATGAGATCGCCCCTGATAGTTATACTCATCCTTACGTTCTAAAAGCTTGCGCGAGGATTAAAAAATTTCATCTCGGAGAGTCGGTTCATGCTTGTGCTGTGAAATTGGGTTTTGTATTGGATGTATTTGTGGGTAATTCTTTGCTTGTTATGTATTGCGCGTTCGGTAACATGAGAGATGCAGGACAGGTGTTCGACGAAATGCCTGAGCTAAGTGCTGTGTCGTGGACGGTTATGATTTACGGGTATGCAAAGATGGGTGATGTGAACACCGCAAGAGGATTGTTTGACCGAGCTCCAATCAAAGATAGGGGAATATGGGGCGCCATGATATCTGGGTATGTGCAAAACAATTGCTTCAAGGAGGGGCTGCACATGTTTCGTCTGATGCAACTGACTGAAGTAGAGCCTGATGAAGCCATAATTGTGACAATCCTTTGTGCTTGCGCTCACATGGGAGCTCTTGACATTGGGATTTGGATTCACAGGTATTTGAGTCATCTCGAATTGCCATTAACTCTGCGAGTGAGCACTGGGTTGATGGATATGTATGCAAAATGTGGGCATCTAGACATGACCAGGCACCTGTTCGATGAAATGCCGCAGAGAGATACCATTTGTTGGAACGTAATGATTTCAGGAATGGCAATGCATGGAGATGGAGAAGGCGCACTGAAGCTCTTCAAGGAGATGGAGAAGGCAAGAATCAAGCCGGATGACATAACATTCATAGCCATTTTGGCAGCTTGTAGCAACTCAGGCATGGCCAATGAAGGCTTGAAGATACTGAACAAAATGTGTACAATACACAAAATTGAGCCAAAAGCTGAACACTACGGGTGTATAATCGACCTGCTGAGTCGAGCTGGGCGGTTCGAGGAAGCGGAGGGAGTGATACAGAGACTTCCAAACACAGCCACTGCTTCAGAGGAAGCAGTGGCTTGGAGGGCTTTTCTGAGTGCTTGCTGTAAGCATGGGGAAATGCAGCAGGCTGAGGGTGCTGCTGAGAGGCTGTTTGAATTGGAAAGACATAGTGGGGCTTACGTTTTACTGTCGAATATGTATGCTGCTCTGGGGAAGCATGGGGATGCTAAAAGAGTGAGGAAGATGATGAAGTTGAAAGGGGTTGAGAAGGTACCTGGTTGCAGCTCCATTAAACTCAATGGAGTTGTCACTGAGTTCATTGCAGGGGATAAAACCCACATCCAAATTGATGATATTCACTTGGTTTTGGAAGAGTTGAATAAACAAATTTCTCAGCCTGATCTTTTATATTTCTAA

Coding sequence (CDS)

ATGAAGCAGCTAAAGCAAGCTCATGCGCAGGTTCTTACATCTGGACTCGGCAGCAACAGCTTCGCGTTAAGCAGATTGTTGGATTTTTGTGCAGAACCACGCCATGGCAGCCTTTCTCATGCATTGAAACTCTACCGACACATTCAACACCCAACCATTTGCATCTGCAACACCATGATCAAAGCCTTTCTTCTACGAGGTGAATTTCTCAACGCCATTGTTATATACTCTGCAATGCGAAGAAATGAGATCGCCCCTGATAGTTATACTCATCCTTACGTTCTAAAAGCTTGCGCGAGGATTAAAAAATTTCATCTCGGAGAGTCGGTTCATGCTTGTGCTGTGAAATTGGGTTTTGTATTGGATGTATTTGTGGGTAATTCTTTGCTTGTTATGTATTGCGCGTTCGGTAACATGAGAGATGCAGGACAGGTGTTCGACGAAATGCCTGAGCTAAGTGCTGTGTCGTGGACGGTTATGATTTACGGGTATGCAAAGATGGGTGATGTGAACACCGCAAGAGGATTGTTTGACCGAGCTCCAATCAAAGATAGGGGAATATGGGGCGCCATGATATCTGGGTATGTGCAAAACAATTGCTTCAAGGAGGGGCTGCACATGTTTCGTCTGATGCAACTGACTGAAGTAGAGCCTGATGAAGCCATAATTGTGACAATCCTTTGTGCTTGCGCTCACATGGGAGCTCTTGACATTGGGATTTGGATTCACAGGTATTTGAGTCATCTCGAATTGCCATTAACTCTGCGAGTGAGCACTGGGTTGATGGATATGTATGCAAAATGTGGGCATCTAGACATGACCAGGCACCTGTTCGATGAAATGCCGCAGAGAGATACCATTTGTTGGAACGTAATGATTTCAGGAATGGCAATGCATGGAGATGGAGAAGGCGCACTGAAGCTCTTCAAGGAGATGGAGAAGGCAAGAATCAAGCCGGATGACATAACATTCATAGCCATTTTGGCAGCTTGTAGCAACTCAGGCATGGCCAATGAAGGCTTGAAGATACTGAACAAAATGTGTACAATACACAAAATTGAGCCAAAAGCTGAACACTACGGGTGTATAATCGACCTGCTGAGTCGAGCTGGGCGGTTCGAGGAAGCGGAGGGAGTGATACAGAGACTTCCAAACACAGCCACTGCTTCAGAGGAAGCAGTGGCTTGGAGGGCTTTTCTGAGTGCTTGCTGTAAGCATGGGGAAATGCAGCAGGCTGAGGGTGCTGCTGAGAGGCTGTTTGAATTGGAAAGACATAGTGGGGCTTACGTTTTACTGTCGAATATGTATGCTGCTCTGGGGAAGCATGGGGATGCTAAAAGAGTGAGGAAGATGATGAAGTTGAAAGGGGTTGAGAAGGTACCTGGTTGCAGCTCCATTAAACTCAATGGAGTTGTCACTGAGTTCATTGCAGGGGATAAAACCCACATCCAAATTGATGATATTCACTTGGTTTTGGAAGAGTTGAATAAACAAATTTCTCAGCCTGATCTTTTATATTTCTAA

Protein sequence

MKQLKQAHAQVLTSGLGSNSFALSRLLDFCAEPRHGSLSHALKLYRHIQHPTICICNTMIKAFLLRGEFLNAIVIYSAMRRNEIAPDSYTHPYVLKACARIKKFHLGESVHACAVKLGFVLDVFVGNSLLVMYCAFGNMRDAGQVFDEMPELSAVSWTVMIYGYAKMGDVNTARGLFDRAPIKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILCACAHMGALDIGIWIHRYLSHLELPLTLRVSTGLMDMYAKCGHLDMTRHLFDEMPQRDTICWNVMISGMAMHGDGEGALKLFKEMEKARIKPDDITFIAILAACSNSGMANEGLKILNKMCTIHKIEPKAEHYGCIIDLLSRAGRFEEAEGVIQRLPNTATASEEAVAWRAFLSACCKHGEMQQAEGAAERLFELERHSGAYVLLSNMYAALGKHGDAKRVRKMMKLKGVEKVPGCSSIKLNGVVTEFIAGDKTHIQIDDIHLVLEELNKQISQPDLLYF
Homology
BLAST of CmoCh12G006630 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 2.7e-102
Identity = 213/600 (35.50%), Postives = 311/600 (51.83%), Query Frame = 0

Query: 1   MKQLKQAHAQVLTSGLGSNSFALSRLLDFC-AEPRHGSLSHALKLYRHIQHPTICICNTM 60
           ++ L+  HAQ++  GL + ++ALS+L++FC   P    L +A+ +++ IQ P + I NTM
Sbjct: 46  LQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTM 105

Query: 61  IKAFLLRGEFLNAIVIYSAMRRNEIAPDSYTHPYVLKACARIKKFHLGESVHACAVKLGF 120
            +   L  + ++A+ +Y  M    + P+SYT P+VLK+CA+ K F  G+ +H   +KLG 
Sbjct: 106 FRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGC 165

Query: 121 VLDVFVGNSLLVMYCAFGNMRDAGQVFDEMPELSAVSWTVMIYGYAKMGDVNTARGLFDR 180
            LD++V  SL+ MY   G + DA +VFD+ P    VS+T +I GYA  G +  A+ LFD 
Sbjct: 166 DLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDE 225

Query: 181 APIKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVT-------------- 240
            P+KD   W AMISGY +   +KE L +F+ M  T V PDE+ +VT              
Sbjct: 226 IPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELG 285

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 286 RQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHM 345

Query: 301 ---------------------------ILCACAHMGALDIGIWIHRYLSHLELPLTLRVS 360
                                      IL ACAH+GA+DIG WIH Y+      +T   S
Sbjct: 346 NLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASS 405

Query: 361 --TGLMDMYAKCGHLDMTRHLFDEMPQRDTICWNVMISGMAMHGDGEGALKLFKEMEKAR 420
             T L+DMYAKCG ++    +F+ +  +    WN MI G AMHG  + +  LF  M K  
Sbjct: 406 LRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIG 465

Query: 421 IKPDDITFIAILAACSNSGMANEGLKILNKMCTIHKIEPKAEHYGCIIDLLSRAGRFEEA 480
           I+PDDITF+ +L+ACS+SGM + G  I   M   +K+ PK EHYGC+IDLL  +G F+EA
Sbjct: 466 IQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEA 525

Query: 481 EGVIQRLPNTATASEEAVAWRAFLSACCKHGEMQQAEGAAERLFELE-RHSGAYVLLSNM 496
           E +I    N      + V W + L AC  HG ++  E  AE L ++E  + G+YVLLSN+
Sbjct: 526 EEMI----NMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNI 585

BLAST of CmoCh12G006630 vs. ExPASy Swiss-Prot
Match: Q9SIL5 (Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E78 PE=2 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 4.2e-100
Identity = 185/491 (37.68%), Postives = 295/491 (60.08%), Query Frame = 0

Query: 5   KQAHAQVLTSGLGSNSFALSRLLDFCAEPRHGSLSHALKLYRHIQHPTICICNTMIKAFL 64
           K+ +A ++  GL  +SF +++++DFC   +   + +A +L+  + +P + + N++I+A+ 
Sbjct: 27  KKINASIIIHGLSQSSFMVTKMVDFC--DKIEDMDYATRLFNQVSNPNVFLYNSIIRAYT 86

Query: 65  LRGEFLNAIVIYSAMRRNEI-APDSYTHPYVLKACARIKKFHLGESVHACAVKLGFVLDV 124
               + + I IY  + R     PD +T P++ K+CA +   +LG+ VH    K G    V
Sbjct: 87  HNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHV 146

Query: 125 FVGNSLLVMYCAFGNMRDAGQVFDEMPELSAVSWTVMIYGYAKMGDVNTARGLFDRAPIK 184
              N+L+ MY  F ++ DA +VFDEM E   +SW  ++ GYA++G +  A+GLF     K
Sbjct: 147 VTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDK 206

Query: 185 DRGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILCACAHMGALDIGIWIH 244
               W AMISGY    C+ E +  FR MQL  +EPDE  ++++L +CA +G+L++G WIH
Sbjct: 207 TIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIH 266

Query: 245 RYLSHLELPLTLRVSTGLMDMYAKCGHLDMTRHLFDEMPQRDTICWNVMISGMAMHGDGE 304
            Y           V   L++MY+KCG +     LF +M  +D I W+ MISG A HG+  
Sbjct: 267 LYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAH 326

Query: 305 GALKLFKEMEKARIKPDDITFIAILAACSNSGMANEGLKILNKMCTIHKIEPKAEHYGCI 364
           GA++ F EM++A++KP+ ITF+ +L+ACS+ GM  EGL+  + M   ++IEPK EHYGC+
Sbjct: 327 GAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCL 386

Query: 365 IDLLSRAGRFEEAEGVIQRLPNTATASEEAVAWRAFLSACCKHGEMQQAEGAAERLFELE 424
           ID+L+RAG+ E A  + + +P       ++  W + LS+C   G +  A  A + L ELE
Sbjct: 387 IDVLARAGKLERAVEITKTMP----MKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELE 446

Query: 425 -RHSGAYVLLSNMYAALGKHGDAKRVRKMMKLKGVEKVPGCSSIKLNGVVTEFIAGDKTH 484
               G YVLL+N+YA LGK  D  R+RKM++ + ++K PG S I++N +V EF++GD + 
Sbjct: 447 PEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNSK 506

Query: 485 IQIDDIHLVLE 494
               +I +VL+
Sbjct: 507 PFWTEISIVLQ 511

BLAST of CmoCh12G006630 vs. ExPASy Swiss-Prot
Match: Q9FJY7 (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 5.4e-95
Identity = 189/489 (38.65%), Postives = 274/489 (56.03%), Query Frame = 0

Query: 2   KQLKQAHAQVLTSGLGSNSFALSRLLDFCAEPRHGS-LSHALKLYRHIQHPTICICNTMI 61
           ++LKQ HA++L +GL  +S+A+++ L FC        L +A  ++     P   + N MI
Sbjct: 28  EELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMI 87

Query: 62  KAFLLRGEFLNAIVIYSAMRRNEIAPDSYTHPYVLKACARIKKFHLGESVHACAVKLGFV 121
           + F    E   ++++Y  M  +    ++YT P +LKAC+ +  F     +HA   KLG+ 
Sbjct: 88  RGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYE 147

Query: 122 LDVFVGNSLLVMYCAFGNMRDAGQVFDEMPELSAVSWTVMIYGYAKMGDVNTARGLFDRA 181
            DV+  NSL+  Y   GN + A  +FD +PE   VSW  +I GY K G ++ A  LF + 
Sbjct: 148 NDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKM 207

Query: 182 PIKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILCACAHMGALDIGI 241
             K+   W  MISGYVQ +  KE L +F  MQ ++VEPD   +   L ACA +GAL+ G 
Sbjct: 208 AEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGK 267

Query: 242 WIHRYLSHLELPLTLRVSTGLMDMYAKCGHLDMTRHLFDEMPQRDTICWNVMISGMAMHG 301
           WIH YL+   + +   +   L+DMYAKCG ++    +F  + ++    W  +ISG A HG
Sbjct: 268 WIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHG 327

Query: 302 DGEGALKLFKEMEKARIKPDDITFIAILAACSNSGMANEGLKILNKMCTIHKIEPKAEHY 361
            G  A+  F EM+K  IKP+ ITF A+L ACS +G+  EG  I   M   + ++P  EHY
Sbjct: 328 HGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHY 387

Query: 362 GCIIDLLSRAGRFEEAEGVIQRLPNTATASEEAVAWRAFLSACCKHGEMQQAEGAAERLF 421
           GCI+DLL RAG  +EA+  IQ +P        AV W A L AC  H  ++  E   E L 
Sbjct: 388 GCIVDLLGRAGLLDEAKRFIQEMP----LKPNAVIWGALLKACRIHKNIELGEEIGEILI 447

Query: 422 ELE-RHSGAYVLLSNMYAALGKHGDAKRVRKMMKLKGVEKVPGCSSIKLNGVVTEFIAGD 481
            ++  H G YV  +N++A   K   A   R++MK +GV KVPGCS+I L G   EF+AGD
Sbjct: 448 AIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGD 507

Query: 482 KTHIQIDDI 489
           ++H +I+ I
Sbjct: 508 RSHPEIEKI 512

BLAST of CmoCh12G006630 vs. ExPASy Swiss-Prot
Match: Q9FMA1 (Pentatricopeptide repeat-containing protein At5g56310 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E13 PE=2 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 2.5e-92
Identity = 180/505 (35.64%), Postives = 298/505 (59.01%), Query Frame = 0

Query: 1   MKQLKQAHAQVLTSGLGSNSFALSRLLDFCAEPRHGSLSHALKLYRHIQHPTICICNTMI 60
           +K LKQ+H  ++ +GL  ++  +++ ++ C+   H  L +A  ++ H   P   + NTMI
Sbjct: 28  LKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGH--LRYAYSVFTHQPCPNTYLHNTMI 87

Query: 61  KAFLLRGE---FLNAIVIYSAMRRNEIAPDSYTHPYVLKACARIKKFHLGESVHACAVKL 120
           +A  L  E      AI +Y  +      PD++T P+VLK   R+     G  +H   V  
Sbjct: 88  RALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVF 147

Query: 121 GFVLDVFVGNSLLVMYCAFGNMRDAGQVFDEMPELSAVSWTVMIYGYAKMGDVNTARGLF 180
           GF   V V   L+ MY + G + DA ++FDEM       W  ++ GY K+G+++ AR L 
Sbjct: 148 GFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLL 207

Query: 181 DRAP--IKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILCACAHMGA 240
           +  P  +++   W  +ISGY ++    E + +F+ M +  VEPDE  ++ +L ACA +G+
Sbjct: 208 EMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGS 267

Query: 241 LDIGIWIHRYLSHLELPLTLRVSTGLMDMYAKCGHLDMTRHLFDEMPQRDTICWNVMISG 300
           L++G  I  Y+ H  +   + ++  ++DMYAK G++     +F+ + +R+ + W  +I+G
Sbjct: 268 LELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAG 327

Query: 301 MAMHGDGEGALKLFKEMEKARIKPDDITFIAILAACSNSGMANEGLKILNKMCTIHKIEP 360
           +A HG G  AL +F  M KA ++P+D+TFIAIL+ACS+ G  + G ++ N M + + I P
Sbjct: 328 LATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHP 387

Query: 361 KAEHYGCIIDLLSRAGRFEEAEGVIQRLPNTATASEEAVAWRAFLSACCKHGEMQQAEGA 420
             EHYGC+IDLL RAG+  EA+ VI+ +P  A A+     W + L+A   H +++  E A
Sbjct: 388 NIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAA----IWGSLLAASNVHHDLELGERA 447

Query: 421 AERLFELE-RHSGAYVLLSNMYAALGKHGDAKRVRKMMKLKGVEKVPGCSSIKLNGVVTE 480
              L +LE  +SG Y+LL+N+Y+ LG+  +++ +R MMK  GV+K+ G SSI++   V +
Sbjct: 448 LSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVYK 507

Query: 481 FIAGDKTHIQIDDIHLVLEELNKQI 500
           FI+GD TH Q++ IH +L+E++ QI
Sbjct: 508 FISGDLTHPQVERIHEILQEMDLQI 526

BLAST of CmoCh12G006630 vs. ExPASy Swiss-Prot
Match: Q9LSB8 (Putative pentatricopeptide repeat-containing protein At3g15930 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E51 PE=3 SV=2)

HSP 1 Score: 340.1 bits (871), Expect = 4.3e-92
Identity = 180/498 (36.14%), Postives = 288/498 (57.83%), Query Frame = 0

Query: 5   KQAHAQVLTSGLGSNSF---ALSRLLDFCAEPRHGSLSHALKLYRHIQHPTICICNTMIK 64
           K+ H  V+  GLGSN +   AL ++   C     G +  A  ++       +   N MI 
Sbjct: 155 KKLHCHVVKFGLGSNLYVQNALVKMYSLC-----GLMDMARGVFDRRCKEDVFSWNLMIS 214

Query: 65  AFLLRGEFLNAIVIYSAMRRNEIAPDSYTHPYVLKACARIKKFHLGESVHACAVKLGFVL 124
            +    E+  +I +   M RN ++P S T   VL AC+++K   L + VH    +     
Sbjct: 215 GYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEP 274

Query: 125 DVFVGNSLLVMYCAFGNMRDAGQVFDEMPELSAVSWTVMIYGYAKMGDVNTARGLFDRAP 184
            + + N+L+  Y A G M  A ++F  M     +SWT ++ GY + G++  AR  FD+ P
Sbjct: 275 SLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMP 334

Query: 185 IKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILCACAHMGALDIGIW 244
           ++DR  W  MI GY++  CF E L +FR MQ   + PDE  +V++L ACAH+G+L+IG W
Sbjct: 335 VRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEW 394

Query: 245 IHRYLSHLELPLTLRVSTGLMDMYAKCGHLDMTRHLFDEMPQRDTICWNVMISGMAMHGD 304
           I  Y+   ++   + V   L+DMY KCG  +  + +F +M QRD   W  M+ G+A +G 
Sbjct: 395 IKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQ 454

Query: 305 GEGALKLFKEMEKARIKPDDITFIAILAACSNSGMANEGLKILNKMCTIHKIEPKAEHYG 364
           G+ A+K+F +M+   I+PDDIT++ +L+AC++SGM ++  K   KM + H+IEP   HYG
Sbjct: 455 GQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYG 514

Query: 365 CIIDLLSRAGRFEEAEGVIQRLPNTATASEEAVAWRAFLSACCKHGEMQQAEGAAERLFE 424
           C++D+L RAG  +EA  +++++P     +  ++ W A L A   H +   AE AA+++ E
Sbjct: 515 CMVDMLGRAGLVKEAYEILRKMP----MNPNSIVWGALLGASRLHNDEPMAELAAKKILE 574

Query: 425 LERHSGA-YVLLSNMYAALGKHGDAKRVRKMMKLKGVEKVPGCSSIKLNGVVTEFIAGDK 484
           LE  +GA Y LL N+YA   +  D + VR+ +    ++K PG S I++NG   EF+AGDK
Sbjct: 575 LEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDK 634

Query: 485 THIQIDDIHLVLEELNKQ 499
           +H+Q ++I++ LEEL ++
Sbjct: 635 SHLQSEEIYMKLEELAQE 643

BLAST of CmoCh12G006630 vs. ExPASy TrEMBL
Match: A0A6J1GK82 (pentatricopeptide repeat-containing protein At2g20540-like OS=Cucurbita moschata OX=3662 GN=LOC111454648 PE=4 SV=1)

HSP 1 Score: 1034.2 bits (2673), Expect = 1.7e-298
Identity = 507/507 (100.00%), Postives = 507/507 (100.00%), Query Frame = 0

Query: 1   MKQLKQAHAQVLTSGLGSNSFALSRLLDFCAEPRHGSLSHALKLYRHIQHPTICICNTMI 60
           MKQLKQAHAQVLTSGLGSNSFALSRLLDFCAEPRHGSLSHALKLYRHIQHPTICICNTMI
Sbjct: 18  MKQLKQAHAQVLTSGLGSNSFALSRLLDFCAEPRHGSLSHALKLYRHIQHPTICICNTMI 77

Query: 61  KAFLLRGEFLNAIVIYSAMRRNEIAPDSYTHPYVLKACARIKKFHLGESVHACAVKLGFV 120
           KAFLLRGEFLNAIVIYSAMRRNEIAPDSYTHPYVLKACARIKKFHLGESVHACAVKLGFV
Sbjct: 78  KAFLLRGEFLNAIVIYSAMRRNEIAPDSYTHPYVLKACARIKKFHLGESVHACAVKLGFV 137

Query: 121 LDVFVGNSLLVMYCAFGNMRDAGQVFDEMPELSAVSWTVMIYGYAKMGDVNTARGLFDRA 180
           LDVFVGNSLLVMYCAFGNMRDAGQVFDEMPELSAVSWTVMIYGYAKMGDVNTARGLFDRA
Sbjct: 138 LDVFVGNSLLVMYCAFGNMRDAGQVFDEMPELSAVSWTVMIYGYAKMGDVNTARGLFDRA 197

Query: 181 PIKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILCACAHMGALDIGI 240
           PIKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILCACAHMGALDIGI
Sbjct: 198 PIKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILCACAHMGALDIGI 257

Query: 241 WIHRYLSHLELPLTLRVSTGLMDMYAKCGHLDMTRHLFDEMPQRDTICWNVMISGMAMHG 300
           WIHRYLSHLELPLTLRVSTGLMDMYAKCGHLDMTRHLFDEMPQRDTICWNVMISGMAMHG
Sbjct: 258 WIHRYLSHLELPLTLRVSTGLMDMYAKCGHLDMTRHLFDEMPQRDTICWNVMISGMAMHG 317

Query: 301 DGEGALKLFKEMEKARIKPDDITFIAILAACSNSGMANEGLKILNKMCTIHKIEPKAEHY 360
           DGEGALKLFKEMEKARIKPDDITFIAILAACSNSGMANEGLKILNKMCTIHKIEPKAEHY
Sbjct: 318 DGEGALKLFKEMEKARIKPDDITFIAILAACSNSGMANEGLKILNKMCTIHKIEPKAEHY 377

Query: 361 GCIIDLLSRAGRFEEAEGVIQRLPNTATASEEAVAWRAFLSACCKHGEMQQAEGAAERLF 420
           GCIIDLLSRAGRFEEAEGVIQRLPNTATASEEAVAWRAFLSACCKHGEMQQAEGAAERLF
Sbjct: 378 GCIIDLLSRAGRFEEAEGVIQRLPNTATASEEAVAWRAFLSACCKHGEMQQAEGAAERLF 437

Query: 421 ELERHSGAYVLLSNMYAALGKHGDAKRVRKMMKLKGVEKVPGCSSIKLNGVVTEFIAGDK 480
           ELERHSGAYVLLSNMYAALGKHGDAKRVRKMMKLKGVEKVPGCSSIKLNGVVTEFIAGDK
Sbjct: 438 ELERHSGAYVLLSNMYAALGKHGDAKRVRKMMKLKGVEKVPGCSSIKLNGVVTEFIAGDK 497

Query: 481 THIQIDDIHLVLEELNKQISQPDLLYF 508
           THIQIDDIHLVLEELNKQISQPDLLYF
Sbjct: 498 THIQIDDIHLVLEELNKQISQPDLLYF 524

BLAST of CmoCh12G006630 vs. ExPASy TrEMBL
Match: A0A6J1I746 (pentatricopeptide repeat-containing protein At2g20540-like OS=Cucurbita maxima OX=3661 GN=LOC111471855 PE=4 SV=1)

HSP 1 Score: 1005.0 bits (2597), Expect = 1.1e-289
Identity = 490/507 (96.65%), Postives = 502/507 (99.01%), Query Frame = 0

Query: 1   MKQLKQAHAQVLTSGLGSNSFALSRLLDFCAEPRHGSLSHALKLYRHIQHPTICICNTMI 60
           MKQLKQAHAQVLTSGLGSNSFALSR+LDFCAEPRHGSLSHALKL++HIQHPTICICNTMI
Sbjct: 18  MKQLKQAHAQVLTSGLGSNSFALSRVLDFCAEPRHGSLSHALKLFQHIQHPTICICNTMI 77

Query: 61  KAFLLRGEFLNAIVIYSAMRRNEIAPDSYTHPYVLKACARIKKFHLGESVHACAVKLGFV 120
           KAFLLRGEFLNAIV+YSAMRRN IAPDSYTHPYVLKACARIKKFHLGESVHACAVKLGFV
Sbjct: 78  KAFLLRGEFLNAIVMYSAMRRNGIAPDSYTHPYVLKACARIKKFHLGESVHACAVKLGFV 137

Query: 121 LDVFVGNSLLVMYCAFGNMRDAGQVFDEMPELSAVSWTVMIYGYAKMGDVNTARGLFDRA 180
           +DVFVGNSLLVMYCAFGNM+DAGQ+FDEMPELSAVSWTVMIYGYAKMGDVNTARGLFDRA
Sbjct: 138 MDVFVGNSLLVMYCAFGNMKDAGQMFDEMPELSAVSWTVMIYGYAKMGDVNTARGLFDRA 197

Query: 181 PIKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILCACAHMGALDIGI 240
           PIKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILCACAHMGALD+GI
Sbjct: 198 PIKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILCACAHMGALDVGI 257

Query: 241 WIHRYLSHLELPLTLRVSTGLMDMYAKCGHLDMTRHLFDEMPQRDTICWNVMISGMAMHG 300
           WIHRYLSHLELPLTLRVSTGLMDMYAKCGHLDMTR+LFDEMPQRDTICWNVMISGMAMHG
Sbjct: 258 WIHRYLSHLELPLTLRVSTGLMDMYAKCGHLDMTRYLFDEMPQRDTICWNVMISGMAMHG 317

Query: 301 DGEGALKLFKEMEKARIKPDDITFIAILAACSNSGMANEGLKILNKMCTIHKIEPKAEHY 360
           DGEGALKLFKEMEKARIKPDDITFIAILAACSNSGMANEGLKILNKM TIHKIEPKAEHY
Sbjct: 318 DGEGALKLFKEMEKARIKPDDITFIAILAACSNSGMANEGLKILNKMSTIHKIEPKAEHY 377

Query: 361 GCIIDLLSRAGRFEEAEGVIQRLPNTATASEEAVAWRAFLSACCKHGEMQQAEGAAERLF 420
           GCIIDLLSRAGRFEEAEGVIQRLPNTATASEEAVAWRAFLSACCKHGEMQQAEGAAERLF
Sbjct: 378 GCIIDLLSRAGRFEEAEGVIQRLPNTATASEEAVAWRAFLSACCKHGEMQQAEGAAERLF 437

Query: 421 ELERHSGAYVLLSNMYAALGKHGDAKRVRKMMKLKGVEKVPGCSSIKLNGVVTEFIAGDK 480
           ELERHSGAYVLLSNMYAALGKHGDAKRVRKMMKLKGVEKVPGCSSIK+NGVVTEFIAGDK
Sbjct: 438 ELERHSGAYVLLSNMYAALGKHGDAKRVRKMMKLKGVEKVPGCSSIKVNGVVTEFIAGDK 497

Query: 481 THIQIDDIHLVLEELNKQISQPDLLYF 508
           TH+QI DIHLVLE L+KQISQPD LYF
Sbjct: 498 THLQIGDIHLVLEVLSKQISQPDRLYF 524

BLAST of CmoCh12G006630 vs. ExPASy TrEMBL
Match: A0A0A0KNK8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G485180 PE=4 SV=1)

HSP 1 Score: 830.5 bits (2144), Expect = 3.8e-237
Identity = 405/504 (80.36%), Postives = 447/504 (88.69%), Query Frame = 0

Query: 1   MKQLKQAHAQVLTSGLGSNSFALSRLLDFCAEPRHGSLSHALKLYRHIQHPTICICNTMI 60
           M QLKQAHAQVL SGL +++F LSRLL+FCAE R+GSLSHA KL++HIQHPTICI NTMI
Sbjct: 18  MNQLKQAHAQVLKSGLHNSNFVLSRLLNFCAESRNGSLSHAFKLFQHIQHPTICIFNTMI 77

Query: 61  KAFLLRGEFLNAIVIYSAMRRNEIAPDSYTHPYVLKACARIKKFHLGESVHACAVKLGFV 120
           KA LLRGEFLNAI ++SA+ RN I PD+YT PYVLKA AR+   HLGES+HAC +KLG  
Sbjct: 78  KALLLRGEFLNAIAVFSAIFRNGIHPDTYTLPYVLKASARMTNIHLGESIHACTIKLGSA 137

Query: 121 LDVFVGNSLLVMYCAFGNMRDAGQVFDEMPELSAVSWTVMIYGYAKMGDVNTARGLFDRA 180
           ++ FVGNSLLVMY +F NMR A QVFDEMPELSAVSWTVMIYGYA MGDV+TAR LFD A
Sbjct: 138 VNEFVGNSLLVMYRSFDNMRSARQVFDEMPELSAVSWTVMIYGYANMGDVDTARELFDMA 197

Query: 181 PIKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILCACAHMGALDIGI 240
            +KD GIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTIL ACAHMGALD GI
Sbjct: 198 TVKDTGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILSACAHMGALDTGI 257

Query: 241 WIHRYLSHLELPLTLRVSTGLMDMYAKCGHLDMTRHLFDEMPQRDTICWNVMISGMAMHG 300
           WIHRYL  L LPLTLRVSTGL+DMYAKCGHLD+ ++LF+EM QRD +CWN MISGMAM G
Sbjct: 258 WIHRYLGRLGLPLTLRVSTGLIDMYAKCGHLDLAKYLFNEMSQRDNVCWNAMISGMAMDG 317

Query: 301 DGEGALKLFKEMEKARIKPDDITFIAILAACSNSGMANEGLKILNKMCTIHKIEPKAEHY 360
           DGEGA+KLF EMEKA IKPD+ITFIA+LAACSNSGM +EG++I N+M T+HKIEPK+EHY
Sbjct: 318 DGEGAIKLFMEMEKAGIKPDNITFIAVLAACSNSGMVDEGIRIWNRMSTVHKIEPKSEHY 377

Query: 361 GCIIDLLSRAGRFEEAEGVIQRLPNTATASEEAVAWRAFLSACCKHGEMQQAEGAAERLF 420
           GC+IDLLSR GRFEEAEGVIQRLP TA+ SEEAVAWRAFLSACCKHG+ QQAE AAERLF
Sbjct: 378 GCVIDLLSRVGRFEEAEGVIQRLPKTASPSEEAVAWRAFLSACCKHGQTQQAEVAAERLF 437

Query: 421 ELERHSGAYVLLSNMYAALGKHGDAKRVRKMMKLKGVEKVPGCSSIKLNGVVTEFIAGDK 480
           +LERHSGAYVLLSNMYAALGKH DAKRVR MMKLKGVEKVPGCSSIK+NGVV EFIAG+K
Sbjct: 438 QLERHSGAYVLLSNMYAALGKHEDAKRVRNMMKLKGVEKVPGCSSIKVNGVVNEFIAGEK 497

Query: 481 THIQIDDIHLVLEELNKQISQPDL 505
           TH  ID+IHLVLEELNKQI + DL
Sbjct: 498 THRHIDNIHLVLEELNKQIVEADL 521

BLAST of CmoCh12G006630 vs. ExPASy TrEMBL
Match: A0A1S4E5C9 (pentatricopeptide repeat-containing protein At2g20540-like OS=Cucumis melo OX=3656 GN=LOC103503327 PE=4 SV=1)

HSP 1 Score: 824.3 bits (2128), Expect = 2.7e-235
Identity = 403/504 (79.96%), Postives = 442/504 (87.70%), Query Frame = 0

Query: 1   MKQLKQAHAQVLTSGLGSNSFALSRLLDFCAEPRHGSLSHALKLYRHIQHPTICICNTMI 60
           M  LKQAHAQVLTSGL +++F LS+LL+FCAE R+GSLSHA KL++HIQHPTICICNTMI
Sbjct: 18  MNHLKQAHAQVLTSGLHNSNFVLSKLLNFCAESRNGSLSHAFKLFQHIQHPTICICNTMI 77

Query: 61  KAFLLRGEFLNAIVIYSAMRRNEIAPDSYTHPYVLKACARIKKFHLGESVHACAVKLGFV 120
           KA LLRGEFLNAIV++SAM RN I PD+YT PYVLKA AR+   HLGES+HAC +KLGF 
Sbjct: 78  KALLLRGEFLNAIVVFSAMFRNGIHPDTYTLPYVLKASARMTNIHLGESIHACTIKLGFA 137

Query: 121 LDVFVGNSLLVMYCAFGNMRDAGQVFDEMPELSAVSWTVMIYGYAKMGDVNTARGLFDRA 180
           +D FVGNSLLVMY +F  M  A QVFDEMPELSAVSWTVMIYGYA MGDV+TAR LFD A
Sbjct: 138 VDEFVGNSLLVMYRSFDKMTSARQVFDEMPELSAVSWTVMIYGYANMGDVDTARELFDMA 197

Query: 181 PIKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILCACAHMGALDIGI 240
            +KD GIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTIL ACAHMGALD GI
Sbjct: 198 TVKDTGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILSACAHMGALDTGI 257

Query: 241 WIHRYLSHLELPLTLRVSTGLMDMYAKCGHLDMTRHLFDEMPQRDTICWNVMISGMAMHG 300
           WIHRYL  L L LTLRV TGL+DMYAKCGHLD+ ++LF+EM QRD +CWN MISGMAM G
Sbjct: 258 WIHRYLGRLGLSLTLRVRTGLIDMYAKCGHLDLAKYLFNEMSQRDNVCWNAMISGMAMDG 317

Query: 301 DGEGALKLFKEMEKARIKPDDITFIAILAACSNSGMANEGLKILNKMCTIHKIEPKAEHY 360
           DGEGA+KLF EMEKA IKPD+ITFIA+LAACSNSGM +EG++I N+M TIHKIEPK+EHY
Sbjct: 318 DGEGAIKLFMEMEKAGIKPDNITFIAVLAACSNSGMVDEGIRIWNRMSTIHKIEPKSEHY 377

Query: 361 GCIIDLLSRAGRFEEAEGVIQRLPNTATASEEAVAWRAFLSACCKHGEMQQAEGAAERLF 420
           GC+IDLLSR GRFEEAE VI RLP TA  SEEAVAWRAFLSACCKHG+ QQAE AAERLF
Sbjct: 378 GCVIDLLSRVGRFEEAEAVILRLPKTANPSEEAVAWRAFLSACCKHGQTQQAEVAAERLF 437

Query: 421 ELERHSGAYVLLSNMYAALGKHGDAKRVRKMMKLKGVEKVPGCSSIKLNGVVTEFIAGDK 480
           +LERHSGAYVLLSNMYAALGKH DAKRVR MMKLKGVEKVPGCSSIK+NGVV EFIAG+K
Sbjct: 438 QLERHSGAYVLLSNMYAALGKHEDAKRVRNMMKLKGVEKVPGCSSIKVNGVVNEFIAGEK 497

Query: 481 THIQIDDIHLVLEELNKQISQPDL 505
           TH  I +IHLVLEELNKQI + DL
Sbjct: 498 THRYIGNIHLVLEELNKQIVEADL 521

BLAST of CmoCh12G006630 vs. ExPASy TrEMBL
Match: A0A5D3DJ94 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold278G00090 PE=4 SV=1)

HSP 1 Score: 822.8 bits (2124), Expect = 8.0e-235
Identity = 402/504 (79.76%), Postives = 441/504 (87.50%), Query Frame = 0

Query: 1   MKQLKQAHAQVLTSGLGSNSFALSRLLDFCAEPRHGSLSHALKLYRHIQHPTICICNTMI 60
           M  LKQAHAQVLTSGL +++F LS+LL+FCAE R+GSLSHA KL++HIQHPTICICNTMI
Sbjct: 18  MNHLKQAHAQVLTSGLHNSNFVLSKLLNFCAESRNGSLSHAFKLFQHIQHPTICICNTMI 77

Query: 61  KAFLLRGEFLNAIVIYSAMRRNEIAPDSYTHPYVLKACARIKKFHLGESVHACAVKLGFV 120
           KA LLRGEFLNAIV++SAM RN I PD+YT PYVLKA AR+   HLGES+HAC +KLGF 
Sbjct: 78  KALLLRGEFLNAIVVFSAMFRNGIHPDTYTLPYVLKASARMTNIHLGESIHACTIKLGFA 137

Query: 121 LDVFVGNSLLVMYCAFGNMRDAGQVFDEMPELSAVSWTVMIYGYAKMGDVNTARGLFDRA 180
           +D FVGNSLLVMY +F  M  A QVFDEMPELSAVSWTVMIYGYA MGDV+TAR LFD A
Sbjct: 138 VDEFVGNSLLVMYRSFDKMTSARQVFDEMPELSAVSWTVMIYGYANMGDVDTARELFDMA 197

Query: 181 PIKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILCACAHMGALDIGI 240
            +KD GIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTIL ACAHMGA D GI
Sbjct: 198 TVKDTGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILSACAHMGAFDTGI 257

Query: 241 WIHRYLSHLELPLTLRVSTGLMDMYAKCGHLDMTRHLFDEMPQRDTICWNVMISGMAMHG 300
           WIHRYL  L L LTLRV TGL+DMYAKCGHLD+ ++LF+EM QRD +CWN MISGMAM G
Sbjct: 258 WIHRYLGRLGLSLTLRVRTGLIDMYAKCGHLDLAKYLFNEMSQRDNVCWNAMISGMAMDG 317

Query: 301 DGEGALKLFKEMEKARIKPDDITFIAILAACSNSGMANEGLKILNKMCTIHKIEPKAEHY 360
           DGEGA+KLF EMEKA IKPD+ITFIA+LAACSNSGM +EG++I N+M TIHKIEPK+EHY
Sbjct: 318 DGEGAIKLFMEMEKAGIKPDNITFIAVLAACSNSGMVDEGIRIWNRMSTIHKIEPKSEHY 377

Query: 361 GCIIDLLSRAGRFEEAEGVIQRLPNTATASEEAVAWRAFLSACCKHGEMQQAEGAAERLF 420
           GC+IDLLSR GRFEEAE VI RLP TA  SEEAVAWRAFLSACCKHG+ QQAE AAERLF
Sbjct: 378 GCVIDLLSRVGRFEEAEAVILRLPKTANPSEEAVAWRAFLSACCKHGQTQQAEVAAERLF 437

Query: 421 ELERHSGAYVLLSNMYAALGKHGDAKRVRKMMKLKGVEKVPGCSSIKLNGVVTEFIAGDK 480
           +LERHSGAYVLLSNMYAALGKH DAKRVR MMKLKGVEKVPGCSSIK+NGVV EFIAG+K
Sbjct: 438 QLERHSGAYVLLSNMYAALGKHEDAKRVRNMMKLKGVEKVPGCSSIKVNGVVNEFIAGEK 497

Query: 481 THIQIDDIHLVLEELNKQISQPDL 505
           TH  I +IHLVLEELNKQI + DL
Sbjct: 498 THRYIGNIHLVLEELNKQIVEADL 521

BLAST of CmoCh12G006630 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 374.0 bits (959), Expect = 1.9e-103
Identity = 213/600 (35.50%), Postives = 311/600 (51.83%), Query Frame = 0

Query: 1   MKQLKQAHAQVLTSGLGSNSFALSRLLDFC-AEPRHGSLSHALKLYRHIQHPTICICNTM 60
           ++ L+  HAQ++  GL + ++ALS+L++FC   P    L +A+ +++ IQ P + I NTM
Sbjct: 46  LQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTM 105

Query: 61  IKAFLLRGEFLNAIVIYSAMRRNEIAPDSYTHPYVLKACARIKKFHLGESVHACAVKLGF 120
            +   L  + ++A+ +Y  M    + P+SYT P+VLK+CA+ K F  G+ +H   +KLG 
Sbjct: 106 FRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGC 165

Query: 121 VLDVFVGNSLLVMYCAFGNMRDAGQVFDEMPELSAVSWTVMIYGYAKMGDVNTARGLFDR 180
            LD++V  SL+ MY   G + DA +VFD+ P    VS+T +I GYA  G +  A+ LFD 
Sbjct: 166 DLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDE 225

Query: 181 APIKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVT-------------- 240
            P+KD   W AMISGY +   +KE L +F+ M  T V PDE+ +VT              
Sbjct: 226 IPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELG 285

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 286 RQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHM 345

Query: 301 ---------------------------ILCACAHMGALDIGIWIHRYLSHLELPLTLRVS 360
                                      IL ACAH+GA+DIG WIH Y+      +T   S
Sbjct: 346 NLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASS 405

Query: 361 --TGLMDMYAKCGHLDMTRHLFDEMPQRDTICWNVMISGMAMHGDGEGALKLFKEMEKAR 420
             T L+DMYAKCG ++    +F+ +  +    WN MI G AMHG  + +  LF  M K  
Sbjct: 406 LRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIG 465

Query: 421 IKPDDITFIAILAACSNSGMANEGLKILNKMCTIHKIEPKAEHYGCIIDLLSRAGRFEEA 480
           I+PDDITF+ +L+ACS+SGM + G  I   M   +K+ PK EHYGC+IDLL  +G F+EA
Sbjct: 466 IQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEA 525

Query: 481 EGVIQRLPNTATASEEAVAWRAFLSACCKHGEMQQAEGAAERLFELE-RHSGAYVLLSNM 496
           E +I    N      + V W + L AC  HG ++  E  AE L ++E  + G+YVLLSN+
Sbjct: 526 EEMI----NMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNI 585

BLAST of CmoCh12G006630 vs. TAIR 10
Match: AT2G20540.1 (mitochondrial editing factor 21 )

HSP 1 Score: 366.7 bits (940), Expect = 3.0e-101
Identity = 185/491 (37.68%), Postives = 295/491 (60.08%), Query Frame = 0

Query: 5   KQAHAQVLTSGLGSNSFALSRLLDFCAEPRHGSLSHALKLYRHIQHPTICICNTMIKAFL 64
           K+ +A ++  GL  +SF +++++DFC   +   + +A +L+  + +P + + N++I+A+ 
Sbjct: 27  KKINASIIIHGLSQSSFMVTKMVDFC--DKIEDMDYATRLFNQVSNPNVFLYNSIIRAYT 86

Query: 65  LRGEFLNAIVIYSAMRRNEI-APDSYTHPYVLKACARIKKFHLGESVHACAVKLGFVLDV 124
               + + I IY  + R     PD +T P++ K+CA +   +LG+ VH    K G    V
Sbjct: 87  HNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHV 146

Query: 125 FVGNSLLVMYCAFGNMRDAGQVFDEMPELSAVSWTVMIYGYAKMGDVNTARGLFDRAPIK 184
              N+L+ MY  F ++ DA +VFDEM E   +SW  ++ GYA++G +  A+GLF     K
Sbjct: 147 VTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDK 206

Query: 185 DRGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILCACAHMGALDIGIWIH 244
               W AMISGY    C+ E +  FR MQL  +EPDE  ++++L +CA +G+L++G WIH
Sbjct: 207 TIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIH 266

Query: 245 RYLSHLELPLTLRVSTGLMDMYAKCGHLDMTRHLFDEMPQRDTICWNVMISGMAMHGDGE 304
            Y           V   L++MY+KCG +     LF +M  +D I W+ MISG A HG+  
Sbjct: 267 LYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAH 326

Query: 305 GALKLFKEMEKARIKPDDITFIAILAACSNSGMANEGLKILNKMCTIHKIEPKAEHYGCI 364
           GA++ F EM++A++KP+ ITF+ +L+ACS+ GM  EGL+  + M   ++IEPK EHYGC+
Sbjct: 327 GAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCL 386

Query: 365 IDLLSRAGRFEEAEGVIQRLPNTATASEEAVAWRAFLSACCKHGEMQQAEGAAERLFELE 424
           ID+L+RAG+ E A  + + +P       ++  W + LS+C   G +  A  A + L ELE
Sbjct: 387 IDVLARAGKLERAVEITKTMP----MKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELE 446

Query: 425 -RHSGAYVLLSNMYAALGKHGDAKRVRKMMKLKGVEKVPGCSSIKLNGVVTEFIAGDKTH 484
               G YVLL+N+YA LGK  D  R+RKM++ + ++K PG S I++N +V EF++GD + 
Sbjct: 447 PEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNSK 506

Query: 485 IQIDDIHLVLE 494
               +I +VL+
Sbjct: 507 PFWTEISIVLQ 511

BLAST of CmoCh12G006630 vs. TAIR 10
Match: AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 349.7 bits (896), Expect = 3.8e-96
Identity = 189/489 (38.65%), Postives = 274/489 (56.03%), Query Frame = 0

Query: 2   KQLKQAHAQVLTSGLGSNSFALSRLLDFCAEPRHGS-LSHALKLYRHIQHPTICICNTMI 61
           ++LKQ HA++L +GL  +S+A+++ L FC        L +A  ++     P   + N MI
Sbjct: 28  EELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMI 87

Query: 62  KAFLLRGEFLNAIVIYSAMRRNEIAPDSYTHPYVLKACARIKKFHLGESVHACAVKLGFV 121
           + F    E   ++++Y  M  +    ++YT P +LKAC+ +  F     +HA   KLG+ 
Sbjct: 88  RGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYE 147

Query: 122 LDVFVGNSLLVMYCAFGNMRDAGQVFDEMPELSAVSWTVMIYGYAKMGDVNTARGLFDRA 181
            DV+  NSL+  Y   GN + A  +FD +PE   VSW  +I GY K G ++ A  LF + 
Sbjct: 148 NDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKM 207

Query: 182 PIKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILCACAHMGALDIGI 241
             K+   W  MISGYVQ +  KE L +F  MQ ++VEPD   +   L ACA +GAL+ G 
Sbjct: 208 AEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGK 267

Query: 242 WIHRYLSHLELPLTLRVSTGLMDMYAKCGHLDMTRHLFDEMPQRDTICWNVMISGMAMHG 301
           WIH YL+   + +   +   L+DMYAKCG ++    +F  + ++    W  +ISG A HG
Sbjct: 268 WIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHG 327

Query: 302 DGEGALKLFKEMEKARIKPDDITFIAILAACSNSGMANEGLKILNKMCTIHKIEPKAEHY 361
            G  A+  F EM+K  IKP+ ITF A+L ACS +G+  EG  I   M   + ++P  EHY
Sbjct: 328 HGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHY 387

Query: 362 GCIIDLLSRAGRFEEAEGVIQRLPNTATASEEAVAWRAFLSACCKHGEMQQAEGAAERLF 421
           GCI+DLL RAG  +EA+  IQ +P        AV W A L AC  H  ++  E   E L 
Sbjct: 388 GCIVDLLGRAGLLDEAKRFIQEMP----LKPNAVIWGALLKACRIHKNIELGEEIGEILI 447

Query: 422 ELE-RHSGAYVLLSNMYAALGKHGDAKRVRKMMKLKGVEKVPGCSSIKLNGVVTEFIAGD 481
            ++  H G YV  +N++A   K   A   R++MK +GV KVPGCS+I L G   EF+AGD
Sbjct: 448 AIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGD 507

Query: 482 KTHIQIDDI 489
           ++H +I+ I
Sbjct: 508 RSHPEIEKI 512

BLAST of CmoCh12G006630 vs. TAIR 10
Match: AT5G56310.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 340.9 bits (873), Expect = 1.8e-93
Identity = 180/505 (35.64%), Postives = 298/505 (59.01%), Query Frame = 0

Query: 1   MKQLKQAHAQVLTSGLGSNSFALSRLLDFCAEPRHGSLSHALKLYRHIQHPTICICNTMI 60
           +K LKQ+H  ++ +GL  ++  +++ ++ C+   H  L +A  ++ H   P   + NTMI
Sbjct: 28  LKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGH--LRYAYSVFTHQPCPNTYLHNTMI 87

Query: 61  KAFLLRGE---FLNAIVIYSAMRRNEIAPDSYTHPYVLKACARIKKFHLGESVHACAVKL 120
           +A  L  E      AI +Y  +      PD++T P+VLK   R+     G  +H   V  
Sbjct: 88  RALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVF 147

Query: 121 GFVLDVFVGNSLLVMYCAFGNMRDAGQVFDEMPELSAVSWTVMIYGYAKMGDVNTARGLF 180
           GF   V V   L+ MY + G + DA ++FDEM       W  ++ GY K+G+++ AR L 
Sbjct: 148 GFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLL 207

Query: 181 DRAP--IKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILCACAHMGA 240
           +  P  +++   W  +ISGY ++    E + +F+ M +  VEPDE  ++ +L ACA +G+
Sbjct: 208 EMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGS 267

Query: 241 LDIGIWIHRYLSHLELPLTLRVSTGLMDMYAKCGHLDMTRHLFDEMPQRDTICWNVMISG 300
           L++G  I  Y+ H  +   + ++  ++DMYAK G++     +F+ + +R+ + W  +I+G
Sbjct: 268 LELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAG 327

Query: 301 MAMHGDGEGALKLFKEMEKARIKPDDITFIAILAACSNSGMANEGLKILNKMCTIHKIEP 360
           +A HG G  AL +F  M KA ++P+D+TFIAIL+ACS+ G  + G ++ N M + + I P
Sbjct: 328 LATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHP 387

Query: 361 KAEHYGCIIDLLSRAGRFEEAEGVIQRLPNTATASEEAVAWRAFLSACCKHGEMQQAEGA 420
             EHYGC+IDLL RAG+  EA+ VI+ +P  A A+     W + L+A   H +++  E A
Sbjct: 388 NIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAA----IWGSLLAASNVHHDLELGERA 447

Query: 421 AERLFELE-RHSGAYVLLSNMYAALGKHGDAKRVRKMMKLKGVEKVPGCSSIKLNGVVTE 480
              L +LE  +SG Y+LL+N+Y+ LG+  +++ +R MMK  GV+K+ G SSI++   V +
Sbjct: 448 LSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVYK 507

Query: 481 FIAGDKTHIQIDDIHLVLEELNKQI 500
           FI+GD TH Q++ IH +L+E++ QI
Sbjct: 508 FISGDLTHPQVERIHEILQEMDLQI 526

BLAST of CmoCh12G006630 vs. TAIR 10
Match: AT3G15930.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 340.1 bits (871), Expect = 3.0e-93
Identity = 180/498 (36.14%), Postives = 288/498 (57.83%), Query Frame = 0

Query: 5   KQAHAQVLTSGLGSNSF---ALSRLLDFCAEPRHGSLSHALKLYRHIQHPTICICNTMIK 64
           K+ H  V+  GLGSN +   AL ++   C     G +  A  ++       +   N MI 
Sbjct: 155 KKLHCHVVKFGLGSNLYVQNALVKMYSLC-----GLMDMARGVFDRRCKEDVFSWNLMIS 214

Query: 65  AFLLRGEFLNAIVIYSAMRRNEIAPDSYTHPYVLKACARIKKFHLGESVHACAVKLGFVL 124
            +    E+  +I +   M RN ++P S T   VL AC+++K   L + VH    +     
Sbjct: 215 GYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEP 274

Query: 125 DVFVGNSLLVMYCAFGNMRDAGQVFDEMPELSAVSWTVMIYGYAKMGDVNTARGLFDRAP 184
            + + N+L+  Y A G M  A ++F  M     +SWT ++ GY + G++  AR  FD+ P
Sbjct: 275 SLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMP 334

Query: 185 IKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILCACAHMGALDIGIW 244
           ++DR  W  MI GY++  CF E L +FR MQ   + PDE  +V++L ACAH+G+L+IG W
Sbjct: 335 VRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEW 394

Query: 245 IHRYLSHLELPLTLRVSTGLMDMYAKCGHLDMTRHLFDEMPQRDTICWNVMISGMAMHGD 304
           I  Y+   ++   + V   L+DMY KCG  +  + +F +M QRD   W  M+ G+A +G 
Sbjct: 395 IKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQ 454

Query: 305 GEGALKLFKEMEKARIKPDDITFIAILAACSNSGMANEGLKILNKMCTIHKIEPKAEHYG 364
           G+ A+K+F +M+   I+PDDIT++ +L+AC++SGM ++  K   KM + H+IEP   HYG
Sbjct: 455 GQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYG 514

Query: 365 CIIDLLSRAGRFEEAEGVIQRLPNTATASEEAVAWRAFLSACCKHGEMQQAEGAAERLFE 424
           C++D+L RAG  +EA  +++++P     +  ++ W A L A   H +   AE AA+++ E
Sbjct: 515 CMVDMLGRAGLVKEAYEILRKMP----MNPNSIVWGALLGASRLHNDEPMAELAAKKILE 574

Query: 425 LERHSGA-YVLLSNMYAALGKHGDAKRVRKMMKLKGVEKVPGCSSIKLNGVVTEFIAGDK 484
           LE  +GA Y LL N+YA   +  D + VR+ +    ++K PG S I++NG   EF+AGDK
Sbjct: 575 LEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDK 634

Query: 485 THIQIDDIHLVLEELNKQ 499
           +H+Q ++I++ LEEL ++
Sbjct: 635 SHLQSEEIYMKLEELAQE 643

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9LN012.7e-10235.50Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... [more]
Q9SIL54.2e-10037.68Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX... [more]
Q9FJY75.4e-9538.65Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX... [more]
Q9FMA12.5e-9235.64Pentatricopeptide repeat-containing protein At5g56310 OS=Arabidopsis thaliana OX... [more]
Q9LSB84.3e-9236.14Putative pentatricopeptide repeat-containing protein At3g15930 OS=Arabidopsis th... [more]
Match NameE-valueIdentityDescription
A0A6J1GK821.7e-298100.00pentatricopeptide repeat-containing protein At2g20540-like OS=Cucurbita moschata... [more]
A0A6J1I7461.1e-28996.65pentatricopeptide repeat-containing protein At2g20540-like OS=Cucurbita maxima O... [more]
A0A0A0KNK83.8e-23780.36Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G485180 PE=4 SV=1[more]
A0A1S4E5C92.7e-23579.96pentatricopeptide repeat-containing protein At2g20540-like OS=Cucumis melo OX=36... [more]
A0A5D3DJ948.0e-23579.76Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
Match NameE-valueIdentityDescription
AT1G08070.11.9e-10335.50Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT2G20540.13.0e-10137.68mitochondrial editing factor 21 [more]
AT5G66520.13.8e-9638.65Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G56310.11.8e-9335.64Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G15930.13.0e-9336.14Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 285..332
e-value: 4.7E-12
score: 45.9
coord: 51..100
e-value: 4.7E-9
score: 36.3
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 127..151
e-value: 0.012
score: 15.8
coord: 155..179
e-value: 1.6E-4
score: 21.7
coord: 187..212
e-value: 4.0E-4
score: 20.4
coord: 359..382
e-value: 0.033
score: 14.4
coord: 259..284
e-value: 0.041
score: 14.1
coord: 394..413
e-value: 0.3
score: 11.4
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 287..320
e-value: 6.9E-9
score: 33.3
coord: 55..88
e-value: 3.2E-4
score: 18.7
coord: 188..220
e-value: 2.3E-6
score: 25.4
coord: 155..179
e-value: 3.4E-4
score: 18.6
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 184..218
score: 9.525427
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 122..156
score: 8.6266
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 285..319
score: 11.936913
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 149..257
e-value: 1.2E-18
score: 69.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 259..485
e-value: 2.3E-40
score: 140.9
coord: 1..148
e-value: 1.3E-20
score: 76.0
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 259..427
NoneNo IPR availablePANTHERPTHR47928:SF89PPR CONTAINING PLANT-LIKE PROTEINcoord: 1..497
NoneNo IPR availablePANTHERPTHR47928REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATEDcoord: 1..497

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh12G006630.1CmoCh12G006630.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:1900865 chloroplast RNA modification
cellular_component GO:0009507 chloroplast
molecular_function GO:0005515 protein binding