CmoCh12G006490 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh12G006490
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Germin-like protein
Location	Cmo_Chr12: 4173314 .. 4173985 (+)
RNA-Seq Expression	CmoCh12G006490
Synteny	CmoCh12G006490

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAACTCCATCATCTCTGCTTCTCTCATTACTAATAATTCTATATTTAGCTTTGGAATTCGACATCGCTCGTTCCGATCCCGACCCGCTTCAAGATTACTGCGTAGCCGACCCGAAAGCCTCCACATCTTCCTTCTTCAATGGCATTCCTTGCATAAACCCTAATTTAGCTAATACACAACATTTCACAACATCGGCTCTATCCCTACCTGGAAACACCAAAAACCTATTCGGATTCAGCGTTACACTAACAAACACCCAAAACTTACCCGGAATCAACACATTGGGCTTGACATTGGCTCGAATCGACATCGGCGGCAGAGGGATTGTGCCGCTCCACTCGCACCCGAGAGCCTCGGAAGTGACGATTTGCTTGATTGGGCGAATGGTTGTGGGGTTTGTGGACACTTCGAATCGGGTGTTTACGAAGAAATTAGGGCCAGGAGAGTCGTTTGTTTTTCCGAAGGGATTGGTTCATTTCATGTACAATGAAGATGTGAAGAACTCGGCTGTCGCGGTCTCTGGGCTTAACAGCCAAAACCCCGGCGCCCAATTGGTGGCGTTGGCGGCGTTCGGTTCTAAACCTGAAATCCCCGAAGAAGTGTTGAAGAAGTCTTTTGAAATTAGCGAATGTGAGATCGCTCATATTCGTAAGAGTCTTGGCGGGTGA

mRNA sequence

ATGGCAACTCCATCATCTCTGCTTCTCTCATTACTAATAATTCTATATTTAGCTTTGGAATTCGACATCGCTCGTTCCGATCCCGACCCGCTTCAAGATTACTGCGTAGCCGACCCGAAAGCCTCCACATCTTCCTTCTTCAATGGCATTCCTTGCATAAACCCTAATTTAGCTAATACACAACATTTCACAACATCGGCTCTATCCCTACCTGGAAACACCAAAAACCTATTCGGATTCAGCGTTACACTAACAAACACCCAAAACTTACCCGGAATCAACACATTGGGCTTGACATTGGCTCGAATCGACATCGGCGGCAGAGGGATTGTGCCGCTCCACTCGCACCCGAGAGCCTCGGAAGTGACGATTTGCTTGATTGGGCGAATGGTTGTGGGGTTTGTGGACACTTCGAATCGGGTGTTTACGAAGAAATTAGGGCCAGGAGAGTCGTTTGTTTTTCCGAAGGGATTGGTTCATTTCATGTACAATGAAGATGTGAAGAACTCGGCTGTCGCGGTCTCTGGGCTTAACAGCCAAAACCCCGGCGCCCAATTGGTGGCGTTGGCGGCGTTCGGTTCTAAACCTGAAATCCCCGAAGAAGTGTTGAAGAAGTCTTTTGAAATTAGCGAATGTGAGATCGCTCATATTCGTAAGAGTCTTGGCGGGTGA

Coding sequence (CDS)

ATGGCAACTCCATCATCTCTGCTTCTCTCATTACTAATAATTCTATATTTAGCTTTGGAATTCGACATCGCTCGTTCCGATCCCGACCCGCTTCAAGATTACTGCGTAGCCGACCCGAAAGCCTCCACATCTTCCTTCTTCAATGGCATTCCTTGCATAAACCCTAATTTAGCTAATACACAACATTTCACAACATCGGCTCTATCCCTACCTGGAAACACCAAAAACCTATTCGGATTCAGCGTTACACTAACAAACACCCAAAACTTACCCGGAATCAACACATTGGGCTTGACATTGGCTCGAATCGACATCGGCGGCAGAGGGATTGTGCCGCTCCACTCGCACCCGAGAGCCTCGGAAGTGACGATTTGCTTGATTGGGCGAATGGTTGTGGGGTTTGTGGACACTTCGAATCGGGTGTTTACGAAGAAATTAGGGCCAGGAGAGTCGTTTGTTTTTCCGAAGGGATTGGTTCATTTCATGTACAATGAAGATGTGAAGAACTCGGCTGTCGCGGTCTCTGGGCTTAACAGCCAAAACCCCGGCGCCCAATTGGTGGCGTTGGCGGCGTTCGGTTCTAAACCTGAAATCCCCGAAGAAGTGTTGAAGAAGTCTTTTGAAATTAGCGAATGTGAGATCGCTCATATTCGTAAGAGTCTTGGCGGGTGA

Protein sequence

MATPSSLLLSLLIILYLALEFDIARSDPDPLQDYCVADPKASTSSFFNGIPCINPNLANTQHFTTSALSLPGNTKNLFGFSVTLTNTQNLPGINTLGLTLARIDIGGRGIVPLHSHPRASEVTICLIGRMVVGFVDTSNRVFTKKLGPGESFVFPKGLVHFMYNEDVKNSAVAVSGLNSQNPGAQLVALAAFGSKPEIPEEVLKKSFEISECEIAHIRKSLGG

Homology

[Close]

BLAST of CmoCh12G006490 vs. ExPASy Swiss-Prot
Match: P92998 (Germin-like protein subfamily 1 member 1 OS=Arabidopsis thaliana OX=3702 GN=GLP7 PE=2 SV=2)

HSP 1 Score: 246.1 bits (627), Expect = 3.7e-64
Identity = 127/215 (59.07%), Postives = 162/215 (75.35%), Query Frame = 0


Query: 11  LLIILYLALEFDIARSDPDPLQDYCVADPKASTSS-FFNGIPCINPNLANTQHFTTSALS 70
           L I+L L L     +SDPDPLQDYCV+ P +S    F NG  C +P  A+   F+TSALS
Sbjct: 3   LNILLTLTLLMGRVKSDPDPLQDYCVSPPPSSHQQIFLNGKLCKDPTQASVSDFSTSALS 62

Query: 71  LPGNTKNL-FGFSVTLTNTQNLPGINTLGLTLARIDIGGRGIVPLHSHPRASEVTICLIG 130
            PGNTK   F  +VT+T T NLPG+NT+GLT+AR+D GG G+VP H HPRASEVT+CL G
Sbjct: 63  RPGNTKTKPFMINVTVTTTANLPGLNTVGLTMARLDFGGSGVVPPHVHPRASEVTVCLDG 122

Query: 131 RMVVGFVDTSNRVFTKKLGPGESFVFPKGLVHFMYNEDVKNSAVAVSGLNSQNPGAQLVA 190
            ++VGFVDTS RVFT++L PGE+FVFPKGL+HF+YN D  +SA+AVSGL+SQNPG Q+V+
Sbjct: 123 VLLVGFVDTSGRVFTQELHPGETFVFPKGLIHFLYNIDTVSSALAVSGLSSQNPGTQIVS 182

Query: 191 LAAFGSKPEIPEEVLKKSFEISECEIAHIRKSLGG 224
           L++F SKP    EVLK +++I+  ++A IRKSL G
Sbjct: 183 LSSFISKPPFLVEVLKSAYDINGQDVARIRKSLEG 217

[Close]

BLAST of CmoCh12G006490 vs. ExPASy Swiss-Prot
Match: Q8H021 (Germin-like protein 3-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0179100 PE=3 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 1.0e-53
Identity = 112/216 (51.85%), Postives = 149/216 (68.98%), Query Frame = 0


Query: 13  IILYLALEFDIARSDPDPLQDYCVADPKASTSS---FFNGIPCINPNLANTQHFTTSALS 72
           I+L LAL   + R DPD L DYCVAD  A+T++     NG+ CI+P LA   HF TSALS
Sbjct: 9   ILLSLALFAVLCRCDPDLLFDYCVADTAAATAAGAFHLNGLACIDPALARADHFATSALS 68

Query: 73  LPGN-TKNLFGFSVTLTN-TQNLPGINTLGLTLARIDIGGRGIVPLHSHPRASEVTICLI 132
              N    L+GF+ TLT+   +LPG N  GL +ARID+   G+ P HSHPRASE  + L 
Sbjct: 69  RATNPAATLYGFNATLTSPAASLPGANAQGLAMARIDLAPGGMAPPHSHPRASEAALVLS 128

Query: 133 GRMVVGFVDTSNRVFTKKLGPGESFVFPKGLVHFMYNEDVKNSAVAVSGLNSQNPGAQLV 192
           G ++VGF DTS R++T+ L  GE+FVFP+ +VHF+YN D    AV +SGLNSQ+PGAQLV
Sbjct: 129 GSVLVGFADTSYRLYTQLLRAGEAFVFPRAMVHFLYNMDTAAPAVVLSGLNSQSPGAQLV 188

Query: 193 ALAAFGSKPEIPEEVLKKSFEISECEIAHIRKSLGG 224
             +AF ++P +P+EVLKK+F+I+  ++  I+K LGG
Sbjct: 189 PFSAFRTEPRLPDEVLKKAFKITGQDVQRIQKHLGG 224

[Close]

BLAST of CmoCh12G006490 vs. ExPASy Swiss-Prot
Match: Q6YZZ2 (Germin-like protein 8-7 OS=Oryza sativa subsp. japonica OX=39947 GN=GER6 PE=2 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 1.0e-42
Identity = 92/213 (43.19%), Postives = 132/213 (61.97%), Query Frame = 0


Query: 1   MATPSSLLLSLLIILYLALEFDIARSDPDPLQDYCVADPKASTSSFFNGIPCINPNLANT 60
           MA+PSS    LL +L   + +    SDP PLQD+CVAD  +      NG  C++P   N 
Sbjct: 1   MASPSS--FCLLAVLLALVSWQAIASDPSPLQDFCVADKHSPV--LVNGFACLDPKYVNA 60

Query: 61  QHFTTSALSLPGNTKNLFGFSVTLTNTQNLPGINTLGLTLARIDIGGRGIVPLHSHPRAS 120
            HF  +A+       N  G +VTL N   +PG+NTLG+++ARID    G  P H+HPRA+
Sbjct: 61  DHFFKAAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGENPPHTHPRAT 120

Query: 121 EVTICLIGRMVVGFV--DTSNRVFTKKLGPGESFVFPKGLVHFMYNEDVKNSAVAVSGLN 180
           E+   L G + VGFV  + +N +F+K L  G+ FVFP+GL+HF +N +    AVA++ L+
Sbjct: 121 EILTVLEGTLYVGFVTSNPNNTLFSKVLNKGDVFVFPEGLIHFQFNPNPHQPAVALAALS 180

Query: 181 SQNPGAQLVALAAFGSKPEIPEEVLKKSFEISE 212
           SQNPGA  +A A FGSKP I +++L K+F++ +
Sbjct: 181 SQNPGAITIANAVFGSKPPISDDILAKAFQVEK 209

[Close]

BLAST of CmoCh12G006490 vs. ExPASy Swiss-Prot
Match: Q6YZA4 (Germin-like protein 8-6 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0189500 PE=2 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.4e-42
Identity = 95/213 (44.60%), Postives = 131/213 (61.50%), Query Frame = 0


Query: 1   MATPSSLLLSLLIILYLALEFDIARSDPDPLQDYCVADPKASTSSFFNGIPCINPNLANT 60
           MA+PSS  L LL  L   + +    SDP PLQD+CVAD  +      NG  C++P   N 
Sbjct: 1   MASPSS--LCLLTALLALVSWQTIASDPSPLQDFCVADEHSPV--LVNGFACLDPKHVNA 60

Query: 61  QHFTTSALSLPGNTKNLFGFSVTLTNTQNLPGINTLGLTLARIDIGGRGIVPLHSHPRAS 120
            HF  +A+       N  G +VTL N   +PG+NTLG+++ARID    G  P H+HPRA+
Sbjct: 61  DHFFKAAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGQNPPHTHPRAT 120

Query: 121 EVTICLIGRMVVGFV--DTSNRVFTKKLGPGESFVFPKGLVHFMYNEDVKNSAVAVSGLN 180
           E+   L G + VGFV  + +N +F+K L  G+ FVFP GL+HF +N +    AVA++ L+
Sbjct: 121 EILTVLEGTLYVGFVTSNPNNTLFSKVLKKGDVFVFPVGLIHFQFNPNPHQPAVAIAALS 180

Query: 181 SQNPGAQLVALAAFGSKPEIPEEVLKKSFEISE 212
           SQNPGA  +A A FGSKP I +EVL K+F++ +
Sbjct: 181 SQNPGAITIANAVFGSKPPISDEVLAKAFQVEK 209

[Close]

BLAST of CmoCh12G006490 vs. ExPASy Swiss-Prot
Match: Q6YZA6 (Germin-like protein 8-5 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0189400 PE=2 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 1.8e-42
Identity = 98/214 (45.79%), Postives = 134/214 (62.62%), Query Frame = 0


Query: 1   MATPSSLLLSLLIILYLALEFDIARSDPDPLQDYCVADPKASTSSFFNGIPCINPNLANT 60
           MA+PSSL L   + L   + +    SDP PLQD+CVAD  +      NG  C+NP   N 
Sbjct: 1   MASPSSLCLLAALAL---ISWQAMASDPSPLQDFCVADMHSPVR--VNGFACLNPMEVNA 60

Query: 61  QHFTTSA-LSLPGNTKNLFGFSVTLTNTQNLPGINTLGLTLARIDIGGRGIVPLHSHPRA 120
            HF  +A L  P  T N  G +VTL N   +PG+NTLG+++ARID    G  P H+HPRA
Sbjct: 61  DHFFKAAKLDTPRKT-NKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGQNPPHTHPRA 120

Query: 121 SEVTICLIGRMVVGFV--DTSNRVFTKKLGPGESFVFPKGLVHFMYNEDVKNSAVAVSGL 180
           +E+   L G + VGFV  + +N +F+K L  G+ FVFP+GL+HF +N +    AVA++ L
Sbjct: 121 TEILTVLEGTLYVGFVTSNPNNTLFSKVLNKGDVFVFPQGLIHFQFNPNPHQPAVAIAAL 180

Query: 181 NSQNPGAQLVALAAFGSKPEIPEEVLKKSFEISE 212
           +SQNPGA  +A A FGSKP I +EVL K+F++ +
Sbjct: 181 SSQNPGAITIANAVFGSKPPISDEVLAKAFQVEK 208

[Close]

BLAST of CmoCh12G006490 vs. ExPASy TrEMBL
Match: A0A6J1GJA1 (Germin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111454359 PE=3 SV=1)

HSP 1 Score: 441.8 bits (1135), Expect = 1.7e-120
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 1   MATPSSLLLSLLIILYLALEFDIARSDPDPLQDYCVADPKASTSSFFNGIPCINPNLANT 60
           MATPSSLLLSLLIILYLALEFDIARSDPDPLQDYCVADPKASTSSFFNGIPCINPNLANT
Sbjct: 1   MATPSSLLLSLLIILYLALEFDIARSDPDPLQDYCVADPKASTSSFFNGIPCINPNLANT 60

Query: 61  QHFTTSALSLPGNTKNLFGFSVTLTNTQNLPGINTLGLTLARIDIGGRGIVPLHSHPRAS 120
           QHFTTSALSLPGNTKNLFGFSVTLTNTQNLPGINTLGLTLARIDIGGRGIVPLHSHPRAS
Sbjct: 61  QHFTTSALSLPGNTKNLFGFSVTLTNTQNLPGINTLGLTLARIDIGGRGIVPLHSHPRAS 120

Query: 121 EVTICLIGRMVVGFVDTSNRVFTKKLGPGESFVFPKGLVHFMYNEDVKNSAVAVSGLNSQ 180
           EVTICLIGRMVVGFVDTSNRVFTKKLGPGESFVFPKGLVHFMYNEDVKNSAVAVSGLNSQ
Sbjct: 121 EVTICLIGRMVVGFVDTSNRVFTKKLGPGESFVFPKGLVHFMYNEDVKNSAVAVSGLNSQ 180

Query: 181 NPGAQLVALAAFGSKPEIPEEVLKKSFEISECEIAHIRKSLGG 224
           NPGAQLVALAAFGSKPEIPEEVLKKSFEISECEIAHIRKSLGG
Sbjct: 181 NPGAQLVALAAFGSKPEIPEEVLKKSFEISECEIAHIRKSLGG 223

[Close]

BLAST of CmoCh12G006490 vs. ExPASy TrEMBL
Match: A0A6J1KN11 (Germin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111496071 PE=3 SV=1)

HSP 1 Score: 431.0 bits (1107), Expect = 3.0e-117
Identity = 219/223 (98.21%), Postives = 219/223 (98.21%), Query Frame = 0


Query: 1   MATPSSLLLSLLIILYLALEFDIARSDPDPLQDYCVADPKASTSSFFNGIPCINPNLANT 60
           MATPSSLLLSLLIIL LA EFDIARSDPDPLQDYCVADPKASTSSFFNGIPCINPNLANT
Sbjct: 1   MATPSSLLLSLLIILSLASEFDIARSDPDPLQDYCVADPKASTSSFFNGIPCINPNLANT 60

Query: 61  QHFTTSALSLPGNTKNLFGFSVTLTNTQNLPGINTLGLTLARIDIGGRGIVPLHSHPRAS 120
           QHFTTSALSLPGNTKNLFGFSVTLTNTQNLPGINTLGLTLARIDIG RGIVPLHSHPRAS
Sbjct: 61  QHFTTSALSLPGNTKNLFGFSVTLTNTQNLPGINTLGLTLARIDIGARGIVPLHSHPRAS 120

Query: 121 EVTICLIGRMVVGFVDTSNRVFTKKLGPGESFVFPKGLVHFMYNEDVKNSAVAVSGLNSQ 180
           EVTICLIGRMVVGFVDTSNRVFTKKLGPGESFVFPKGLVHFMYNED KNSAVAVSGLNSQ
Sbjct: 121 EVTICLIGRMVVGFVDTSNRVFTKKLGPGESFVFPKGLVHFMYNEDGKNSAVAVSGLNSQ 180

Query: 181 NPGAQLVALAAFGSKPEIPEEVLKKSFEISECEIAHIRKSLGG 224
           NPGAQLVALAAFGSKPEIPEEVLKKSFEISECEIAHIRKSLGG
Sbjct: 181 NPGAQLVALAAFGSKPEIPEEVLKKSFEISECEIAHIRKSLGG 223

[Close]

BLAST of CmoCh12G006490 vs. ExPASy TrEMBL
Match: A0A0A0KHF1 (Germin-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G404270 PE=3 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 1.1e-100
Identity = 188/224 (83.93%), Postives = 203/224 (90.62%), Query Frame = 0


Query: 1   MATPSSLLLSLLIILYLALEFDIARSDPDPLQDYCVADPKASTSSFFNGIPCINPNLANT 60
           MATPS  L   L++L+L+ +F+  RSDPDPLQD+CVADPKASTSSFFNGIPCINPNLA  
Sbjct: 1   MATPSFFLHLSLLLLHLSFKFEFGRSDPDPLQDFCVADPKASTSSFFNGIPCINPNLATV 60

Query: 61  QHFTTSALSLPGNTK-NLFGFSVTLTNTQNLPGINTLGLTLARIDIGGRGIVPLHSHPRA 120
            HF TSALSLPGNTK N FGFSVT+TN QNLPGINTLGLTLARID+  RG+VPLHSHPRA
Sbjct: 61  DHFKTSALSLPGNTKSNRFGFSVTVTNPQNLPGINTLGLTLARIDLDPRGLVPLHSHPRA 120

Query: 121 SEVTICLIGRMVVGFVDTSNRVFTKKLGPGESFVFPKGLVHFMYNEDVKNSAVAVSGLNS 180
           SEVTICLIG+MVVGFVDTSNRVFTKK+GPGESFVFPKGL+HFMYNED K SAVAVSGLNS
Sbjct: 121 SEVTICLIGQMVVGFVDTSNRVFTKKIGPGESFVFPKGLLHFMYNEDFKKSAVAVSGLNS 180

Query: 181 QNPGAQLVALAAFGSKPEIPEEVLKKSFEISECEIAHIRKSLGG 224
           QNPGAQL+ALA F SKPEIPEEVLKKSF+ISECEIAHIRKSLGG
Sbjct: 181 QNPGAQLLALAVFTSKPEIPEEVLKKSFQISECEIAHIRKSLGG 224

[Close]

BLAST of CmoCh12G006490 vs. ExPASy TrEMBL
Match: A0A5A7T0P4 (Germin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold360G00780 PE=3 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 2.5e-100
Identity = 191/224 (85.27%), Postives = 204/224 (91.07%), Query Frame = 0


Query: 1   MATPSSLLLSLLIILYLALEFDIARSDPDPLQDYCVADPKASTSSFFNGIPCINPNLANT 60
           MATPS  L  LL++L+L+ +FD ARSDPDPLQD+CVAD KASTSSFFNGIPCINPNLA  
Sbjct: 1   MATPSFFL--LLLLLHLSSKFDFARSDPDPLQDFCVADQKASTSSFFNGIPCINPNLATV 60

Query: 61  QHFTTSALSLPGNTK-NLFGFSVTLTNTQNLPGINTLGLTLARIDIGGRGIVPLHSHPRA 120
            HF TSALSLPGNTK N FGFSVTLTN QNLPGINTLGLTLARID+  RG+VPLHSHPRA
Sbjct: 61  DHFKTSALSLPGNTKSNRFGFSVTLTNPQNLPGINTLGLTLARIDLDPRGLVPLHSHPRA 120

Query: 121 SEVTICLIGRMVVGFVDTSNRVFTKKLGPGESFVFPKGLVHFMYNEDVKNSAVAVSGLNS 180
           SEVTICLIG+MVVGFVDTSNRVFTKK+GPGESFVFPKGL+HFMYNED K SAVAVSGLNS
Sbjct: 121 SEVTICLIGQMVVGFVDTSNRVFTKKIGPGESFVFPKGLLHFMYNEDFKKSAVAVSGLNS 180

Query: 181 QNPGAQLVALAAFGSKPEIPEEVLKKSFEISECEIAHIRKSLGG 224
           QNPGAQL ALAAF SKPEIP+EVLKKSF+ISECEIAHIRKSLGG
Sbjct: 181 QNPGAQLSALAAFTSKPEIPQEVLKKSFQISECEIAHIRKSLGG 222

[Close]

BLAST of CmoCh12G006490 vs. ExPASy TrEMBL
Match: A0A1S3C4L1 (Germin-like protein OS=Cucumis melo OX=3656 GN=LOC103496414 PE=3 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 2.5e-100
Identity = 191/224 (85.27%), Postives = 204/224 (91.07%), Query Frame = 0


Query: 1   MATPSSLLLSLLIILYLALEFDIARSDPDPLQDYCVADPKASTSSFFNGIPCINPNLANT 60
           MATPS  L  LL++L+L+ +FD ARSDPDPLQD+CVAD KASTSSFFNGIPCINPNLA  
Sbjct: 1   MATPSFFL--LLLLLHLSSKFDFARSDPDPLQDFCVADQKASTSSFFNGIPCINPNLATV 60

Query: 61  QHFTTSALSLPGNTK-NLFGFSVTLTNTQNLPGINTLGLTLARIDIGGRGIVPLHSHPRA 120
            HF TSALSLPGNTK N FGFSVTLTN QNLPGINTLGLTLARID+  RG+VPLHSHPRA
Sbjct: 61  DHFKTSALSLPGNTKSNRFGFSVTLTNPQNLPGINTLGLTLARIDLDPRGLVPLHSHPRA 120

Query: 121 SEVTICLIGRMVVGFVDTSNRVFTKKLGPGESFVFPKGLVHFMYNEDVKNSAVAVSGLNS 180
           SEVTICLIG+MVVGFVDTSNRVFTKK+GPGESFVFPKGL+HFMYNED K SAVAVSGLNS
Sbjct: 121 SEVTICLIGQMVVGFVDTSNRVFTKKIGPGESFVFPKGLLHFMYNEDFKKSAVAVSGLNS 180

Query: 181 QNPGAQLVALAAFGSKPEIPEEVLKKSFEISECEIAHIRKSLGG 224
           QNPGAQL ALAAF SKPEIP+EVLKKSF+ISECEIAHIRKSLGG
Sbjct: 181 QNPGAQLSALAAFTSKPEIPQEVLKKSFQISECEIAHIRKSLGG 222

[Close]

BLAST of CmoCh12G006490 vs. TAIR 10
Match: AT1G10460.1 (germin-like protein 7 )

HSP 1 Score: 246.1 bits (627), Expect = 2.6e-65
Identity = 127/215 (59.07%), Postives = 162/215 (75.35%), Query Frame = 0


Query: 11  LLIILYLALEFDIARSDPDPLQDYCVADPKASTSS-FFNGIPCINPNLANTQHFTTSALS 70
           L I+L L L     +SDPDPLQDYCV+ P +S    F NG  C +P  A+   F+TSALS
Sbjct: 3   LNILLTLTLLMGRVKSDPDPLQDYCVSPPPSSHQQIFLNGKLCKDPTQASVSDFSTSALS 62

Query: 71  LPGNTKNL-FGFSVTLTNTQNLPGINTLGLTLARIDIGGRGIVPLHSHPRASEVTICLIG 130
            PGNTK   F  +VT+T T NLPG+NT+GLT+AR+D GG G+VP H HPRASEVT+CL G
Sbjct: 63  RPGNTKTKPFMINVTVTTTANLPGLNTVGLTMARLDFGGSGVVPPHVHPRASEVTVCLDG 122

Query: 131 RMVVGFVDTSNRVFTKKLGPGESFVFPKGLVHFMYNEDVKNSAVAVSGLNSQNPGAQLVA 190
            ++VGFVDTS RVFT++L PGE+FVFPKGL+HF+YN D  +SA+AVSGL+SQNPG Q+V+
Sbjct: 123 VLLVGFVDTSGRVFTQELHPGETFVFPKGLIHFLYNIDTVSSALAVSGLSSQNPGTQIVS 182

Query: 191 LAAFGSKPEIPEEVLKKSFEISECEIAHIRKSLGG 224
           L++F SKP    EVLK +++I+  ++A IRKSL G
Sbjct: 183 LSSFISKPPFLVEVLKSAYDINGQDVARIRKSLEG 217

[Close]

BLAST of CmoCh12G006490 vs. TAIR 10
Match: AT3G05950.1 (RmlC-like cupins superfamily protein )

HSP 1 Score: 166.8 bits (421), Expect = 2.0e-41
Identity = 94/205 (45.85%), Postives = 131/205 (63.90%), Query Frame = 0


Query: 8   LLSLLIILYLALEFDIARSDPDPLQDYCVADPKASTSSFFNGIPCINPNLANTQHFTTSA 67
           L++  I+L LA  F ++  DP PLQD+CVA   AS   F NG  C +P     + F TS 
Sbjct: 8   LVAKAILLALASSF-VSCYDPSPLQDFCVAVDDAS-GVFVNGKFCKDPKYVKAEDFFTSG 67

Query: 68  LSLPGNTKNLFGFSVTLTNTQNLPGINTLGLTLARIDIGGRGIVPLHSHPRASEVTICLI 127
           L++ GNT N  G +VT  N   +PG+NTLG++L RID    G  P H+HPRA+E+ + + 
Sbjct: 68  LNIAGNTINRVGSNVTNVNVDKIPGLNTLGVSLVRIDFAPGGQNPPHTHPRATEILVVVE 127

Query: 128 GRMVVGFVDT---SNRVFTKKLGPGESFVFPKGLVHFMYNEDVKNSAVAVSGLNSQNPGA 187
           G ++VGFV +   +NR+F+K L PG+ FVFP G++HF  N   + +AVA +GL SQNPG 
Sbjct: 128 GTLLVGFVTSNQDNNRLFSKVLYPGDVFVFPIGMIHFQVNVG-RTNAVAFAGLGSQNPGT 187

Query: 188 QLVALAAFGSKPEIPEEVLKKSFEI 210
             +A A FGSKP I  E+L K+F++
Sbjct: 188 ITIADAVFGSKPSIMPEILAKAFQL 209

[Close]

BLAST of CmoCh12G006490 vs. TAIR 10
Match: AT1G09560.1 (germin-like protein 5 )

HSP 1 Score: 162.2 bits (409), Expect = 5.0e-40
Identity = 91/219 (41.55%), Postives = 129/219 (58.90%), Query Frame = 0


Query: 1   MATPSSLLLSLLIILYLALEFDIARSDPDPLQDYCVADPKASTSSFFNGIPCINPNLANT 60
           MA+P+   L+LL++L     F  + +DPD LQD CVAD  +      NG PC +     +
Sbjct: 1   MASPT---LTLLLLLTTVSFFISSSADPDMLQDLCVADLPSGIK--INGFPCKDAATVTS 60

Query: 61  QHFTTSALSLPGNTKNLFGFSVTLTNTQNLPGINTLGLTLARIDIGGRGIVPLHSHPRAS 120
             F +  L+ PG T N FG  VT  N   +PG+NTLG++L+RID    G+ P H+HPRA+
Sbjct: 61  ADFFSQGLAKPGLTNNTFGALVTGANVMTIPGLNTLGVSLSRIDYAPGGLNPPHTHPRAT 120

Query: 121 EVTICLIGRMVVGFVDTSNRVFTKKLGPGESFVFPKGLVHFMYNE-DVKNSAVAVSGLNS 180
           EV   L G + VGF+ T+N++ ++ L  G+ F FPKGLVHF  N  DV  S +A    NS
Sbjct: 121 EVVFVLEGTLDVGFLTTANKLISQSLKKGDVFAFPKGLVHFQKNNGDVPASVIA--AFNS 180

Query: 181 QNPGAQLVALAAFGSKPEIPEEVLKKSFEISECEIAHIR 219
           Q PG Q +    FGS P +P+ +L ++F+ S   + HI+
Sbjct: 181 QLPGTQSLGATLFGSTPPVPDNILAQAFQTSPGTVKHIK 212

[Close]

BLAST of CmoCh12G006490 vs. TAIR 10
Match: AT3G04170.1 (RmlC-like cupins superfamily protein )

HSP 1 Score: 159.8 bits (403), Expect = 2.5e-39
Identity = 95/222 (42.79%), Postives = 132/222 (59.46%), Query Frame = 0


Query: 1   MATPSSLLLSLLIILYLALEFDIARSDPDPLQDYCVADPKASTSSFFNGIPCINPNLANT 60
           M  P    L+ +I+L LA  F ++  DP PLQDYCVA P+     F NG  C +P L  +
Sbjct: 1   MKYPFQCFLAKIILLALASSF-VSCYDPSPLQDYCVAVPE-KNGVFVNGEFCKDPKLVTS 60

Query: 61  QHFTTSALSLPGNTKNLFGFSVTLTNTQNLPGINTLGLTLARIDIGGRGIVPLHSHPRAS 120
             F  S L++PGNT    G   +  N  N+PG+NTLG+ +ARID    G++P H HPRAS
Sbjct: 61  DDFFASGLNIPGNTNKRLG---SFVNPANIPGLNTLGVGIARIDFAPGGLIPPHIHPRAS 120

Query: 121 EVTICLIGRMVVGFV---DTSNRVFTKKLGPGESFVFPKGLVHFMYNEDVKNSAVAVSGL 180
           E+ + + G+++VGFV   D +  +F+K L PG+ FV P GLV F  N   K +AVA+  +
Sbjct: 121 EIILVIKGKLLVGFVSSNDYNYTLFSKILYPGDVFVHPIGLVQFHANIG-KTNAVAIGAV 180

Query: 181 NSQNPGAQLVALAAFGSKPEIPEEVLKKSFEISECEIAHIRK 220
            SQNPG   V  A FGSKP I  ++L K+F +    + ++RK
Sbjct: 181 GSQNPGYISVGDAVFGSKPPIDPKILAKAFALDINIVRYLRK 216

[Close]

BLAST of CmoCh12G006490 vs. TAIR 10
Match: AT3G04200.1 (RmlC-like cupins superfamily protein )

HSP 1 Score: 159.5 bits (402), Expect = 3.2e-39
Identity = 90/206 (43.69%), Postives = 128/206 (62.14%), Query Frame = 0


Query: 7   LLLSLLIILYLALEFDIARSDPDPLQDYCVADPKASTSSFFNGIPCINPNLANTQHFTTS 66
           LL++ +I+L LA  F ++  DP+PLQD+CVA    +   F NG  C +P       F+ S
Sbjct: 8   LLVTQVILLALATSF-VSCYDPNPLQDFCVA-ASETNRVFVNGKFCKDPKSVTANDFSYS 67

Query: 67  ALSLPGNTKNLFGFSVTLTNTQNLPGINTLGLTLARIDIGGRGIVPLHSHPRASEVTICL 126
            L++  NT N  G +VT  +   +PG+NTLG++LAR+D    G  P H HPRA+E+ +  
Sbjct: 68  GLNIARNTTNFLGSNVTTVDVNKIPGLNTLGVSLARLDFAQGGQNPPHIHPRATEILVVT 127

Query: 127 IGRMVVGFVDT---SNRVFTKKLGPGESFVFPKGLVHFMYNEDVKNSAVAVSGLNSQNPG 186
            G+++VGFV +   +NR+F K L  G+ FVFP GL+HF  N   +  AVA +G  SQNPG
Sbjct: 128 KGKLLVGFVSSNQDNNRLFYKVLKRGDVFVFPIGLIHFQMNVR-RTRAVAFAGFGSQNPG 187

Query: 187 AQLVALAAFGSKPEIPEEVLKKSFEI 210
              +A A FGS P IP+EVL K+F++
Sbjct: 188 TIRIADAVFGSNPSIPQEVLAKAFQL 210

The following BLAST results are available for this feature:

BLAST of CmoCh12G006490 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P92998	3.7e-64	59.07	Germin-like protein subfamily 1 member 1 OS=Arabidopsis thaliana OX=3702 GN=GLP7...	[more]
Q8H021	1.0e-53	51.85	Germin-like protein 3-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0179100...	[more]
Q6YZZ2	1.0e-42	43.19	Germin-like protein 8-7 OS=Oryza sativa subsp. japonica OX=39947 GN=GER6 PE=2 SV...	[more]
Q6YZA4	1.4e-42	44.60	Germin-like protein 8-6 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0189500...	[more]
Q6YZA6	1.8e-42	45.79	Germin-like protein 8-5 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0189400...	[more]

BLAST of CmoCh12G006490 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GJA1	1.7e-120	100.00	Germin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111454359 PE=3 SV=1	[more]
A0A6J1KN11	3.0e-117	98.21	Germin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111496071 PE=3 SV=1	[more]
A0A0A0KHF1	1.1e-100	83.93	Germin-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G404270 PE=3 SV=1	[more]
A0A5A7T0P4	2.5e-100	85.27	Germin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold360G...	[more]
A0A1S3C4L1	2.5e-100	85.27	Germin-like protein OS=Cucumis melo OX=3656 GN=LOC103496414 PE=3 SV=1	[more]

BLAST of CmoCh12G006490 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G10460.1	2.6e-65	59.07	germin-like protein 7	[more]
AT3G05950.1	2.0e-41	45.85	RmlC-like cupins superfamily protein	[more]
AT1G09560.1	5.0e-40	41.55	germin-like protein 5	[more]
AT3G04170.1	2.5e-39	42.79	RmlC-like cupins superfamily protein	[more]
AT3G04200.1	3.2e-39	43.69	RmlC-like cupins superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001929	Germin	PRINTS	PR00325	GERMIN	coord: 178..193 score: 48.84 coord: 114..134 score: 49.72 coord: 144..164 score: 52.38
IPR006045	Cupin 1	SMART	SM00835	Cupin_1_3	coord: 66..215 e-value: 3.2E-33 score: 126.4
IPR006045	Cupin 1	PFAM	PF00190	Cupin_1	coord: 68..211 e-value: 1.5E-38 score: 131.7
IPR014710	RmlC-like jelly roll fold	GENE3D	2.60.120.10	Jelly Rolls	coord: 26..223 e-value: 1.3E-68 score: 232.4
None	No IPR available	PANTHER	PTHR31238	GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3	coord: 13..222
None	No IPR available	PANTHER	PTHR31238:SF5	GERMIN-LIKE PROTEIN SUBFAMILY 1 MEMBER 1	coord: 13..222
None	No IPR available	CDD	cd02241	cupin_OxOx	coord: 27..221 e-value: 5.05602E-72 score: 215.537
IPR019780	Germin, manganese binding site	PROSITE	PS00725	GERMIN	coord: 109..122
IPR011051	RmlC-like cupin domain superfamily	SUPERFAMILY	51182	RmlC-like cupins	coord: 27..219

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh12G006490.1	CmoCh12G006490.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0048046	apoplast
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0030145	manganese ion binding