CmoCh12G005920 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATGGGAAGGGAAAGTATATGCAGCATTCCGGACGTCTTGGCTCGACGTATTTGTTATAAGCTCGAGTCTTGACGAGTTTCTGGCAATGTAAATCCCTGCTGCTGCTGCTGCTGCTGCTACAATGTGATAGAATAGGTGAAAGAAAGAAACTGGGAGACAGTTCCACGCTTATGGTGTATTTGATTCGTGTATCATTTCGTACTCTTGGTGCTTATGATAAAGAGTTAGCAGAAATTAAGGTTGTTGTATGCTACTTGCTTTCAAAGTTCTAAATATTTTGGGTATTCCGATGTTTTTCAGCTGAACTCGAGCTTGGTTGACCTGAAAAAACGTTAATTTAACAGCGGGAAGGGGGCGGACTTTCCTATGGTAGTCCCGCTACGGCTATGACCGTTCGTCCCGTCTCATCTTTCTTTGGCTATGGGTCGTCTGAGGTGAAATGGATTAATTTAATGTGTATTTTGTTTGTTAAATTTGATAATGAAATCAAATCAATATATAATTGGGTATTGAAAATTAACGTAAATGATGTAAATTTTGAAGCAAAGAAGGAAAATGAGCGTTGAATTGAAATGAGAATGTTATAGAAGGCGCGAGGACACGAAGCGATTTCGTTGGCTCAGAAATTTACAAAAACCGCCGCTTCTTCTCCGGCGGCCATTTTGATGGAGTGGTAAAATCTCAATCAATGGGCATCAAGCGAGAGAGTAAAAGGTCGGCTTCTGCAACTTCGCCGTGTGCTGATCTTAGGGCTGTATATCACAATTGTTTCAATCGGTATGTTTCCATTTTCATTCCCTAAACCCTTTCTGAACCCTAATTAAGCGATTTCTGGTTTTGATTCGCAGTTGGTACTCGGAGAAGTTTGTGAAAGGTCAATTCGATGAAGAACCCTGCGTCTCCGAATGGCAGAAGTACAGAGCTTGCCTCTCTGTATGTCTTCGAGCTTTGTTTGATTCCTTCCTATTAGGTTTTGTCAATGTCGTTTGATTTCGTTGCGATCTGATATAGCCTCCAAATTACAGGAGCATTTGGAAGATAAGAAGCTGAAGCGCTTCTTGGAAGAGGAAACGATTGTTCATTCCTCCATGAAAGCTGAAACGAGTTGAGAATCGAGATTGGCTTACTTGAATGGACATTTTGAGGTCTTCACAAACTTGAAAACCATGTTTAATTGTTATTTTCCACCACTGTGTTAGAACAAATGGAGTTTTTTTGCTGCTCAAACTCTAGTTTATTTGAAAAGCATCTGAACTTTAGCTACATGATAGAAATTCAACTAGATCAGCTTATTAAGAAGATACGTGGTCTTGTTTAATAGAAAAGTTCCTGTGTTCTATGGTGAGTTCTTCTTCTTTTCTCTGCATATTTCACTTCCCTCAGCAGTAATCCTGCAGCCCACTTAGGCGAGCCATTGTTACAGAACCAAAAGAGTTTGTTCTTTTCTTTTCTAGTTTTTTTTGGCCAATTCACGTCCCGTAGAAGCTCATTATTTTTAATTTTTAGCTTCTATAATAATTGTGTGAGATCCCACGTCGGTTGGAGAGAGGAACGAAACATTCCTCAGAAAGGTGTAGAAACCTCTCCTTAGTAGACGCGCTCCCTGGTAGACGCACTTTAAAATCTTGAGGAAAAGCCCATAAGGGAAATCCTAAAGAGGACGATATTTGCTAGCGGTGTGCTTGAGCGGTTACAAATGGTATCAGAGCTAGACACCGAGCGGTGTGCTAGCGAGGACGCTGGTCCCCAAGGGGTGGATTGTGAGATCCCACGTCGGTTGGAGAGGAGAATGAAGCATTTCTTATAAGGGCGTGGAAACCTCTCCTAAATAGACGCATTTTAAAACCTTAGAGAATGAAGCATTTCTTATAAGGGCGTGGAAACCTCTTCTAAATAGACGCATTTTAAAACCTTAGAGAATGAAGCATTTCTTGTAAGGGCGTGGAAACCTCTCCTAAATAGATGCATTTTAAAACTTTAGAGGGAAGTTTAAAGAGGACAATATCGACTAACGGTGAGCTTAAACTATTATAAGTTCTGCTCTTCTTATCTGTTCAAGAAAATTGCAGAAGATTGGGTGGTTGGTATCTGCTGTATGATACCTCTTTTGAAGAAACTATTGATGTCAGACATGAGAATGTGGCACAGTGGAGCATTATGCTGGTAGTGAGCTGCATTCATTTGCACCATTTCAGAGTCAAAGTGCAAAGTGAACATGAGGATCATTGAAGGTGCAATCACATTCAAGGTGCACTCTCTCTATCATCTGATTTAAAGACCATTCATGCTTTGATTGCTATTGGGAAACTTTTCCTGTCATTGAAATGCTAAATTTTGCCTTTGTTTTACGCTCTCTTTTGGAAATGCAACCCATTTGGTATATTTGAATTATACTATAAGATAGATTTGTAGTCATGAATAACATTGAATTTGGATATTGGATAGTCCTGTACTATTATGTTTGGCTTTGAAGTTGAAAGCTTAAATTTGGATAGTCCTCTCGTCAGCTTAAG ATGAATGGGAAGGGAAATTTCTGGCAATGTAAATCCCTGCTGCTGCTGCTGCTGCTGCTACAATGTGATAGAATAGGTGAAAGAAAGAAACTGGGAGACAGTTCCACGCTTATGGTGTATTTGATTCGTGTATCATTTCGTACTCTTGGTGCTTATGATAAAGAGTTAGCAGAAATTAAGCGGGAAGGGGGCGGACTTTCCTATGGTAGTCCCGCTACGGCTATGACCGTTCGTCCCGTCTCATCTTTCTTTGGCTATGGGTCGTCTGAGGTGAAATGGATTAATTTAATGTGCGCGAGGACACGAAGCGATTTCGTTGGCTCAGAAATTTACAAAAACCGCCGCTTCTTCTCCGGCGGCCATTTTGATGGAGTGGTAAAATCTCAATCAATGGGCATCAAGCGAGAGAGTAAAAGGTCGGCTTCTGCAACTTCGCCGTGTGCTGATCTTAGGGCTGTATATCACAATTGTTTCAATCGTTGGTACTCGGAGAAGTTTGTGAAAGGTCAATTCGATGAAGAACCCTGCGTCTCCGAATGGCAGAAGTACAGAGCTTGCCTCTCTGAGCATTTGGAAGATAAGAAGCTGAAGCGCTTCTTGGAAGAGGAAACGATTGTTCATTCCTCCATGAAAGCTGAAACGAGTTGAGAATCGAGATTGGCTTACTTGAATGGACATTTTGAGAAGATTGGGTGGTTGGTATCTGCTGTATGATACCTCTTTTGAAGAAACTATTGATGTCAGACATGAGAATGTGGCACAGTGGAGCATTATGCTGGTAGTGAGCTGCATTCATTTGCACCATTTCAGAGTCAAAGTGCAAAGTGAACATGAGGATCATTGAAGGTGCAATCACATTCAAGGTGCACTCTCTCTATCATCTGATTTAAAGACCATTCATGCTTTGATTGCTATTGGGAAACTTTTCCTGTCATTGAAATGCTAAATTTTGCCTTTGTTTTACGCTCTCTTTTGGAAATGCAACCCATTTGGTATATTTGAATTATACTATAAGATAGATTTGTAGTCATGAATAACATTGAATTTGGATATTGGATAGTCCTGTACTATTATGTTTGGCTTTGAAGTTGAAAGCTTAAATTTGGATAGTCCTCTCGTCAGCTTAAG ATGAATGGGAAGGGAAATTTCTGGCAATGTAAATCCCTGCTGCTGCTGCTGCTGCTGCTACAATGTGATAGAATAGGTGAAAGAAAGAAACTGGGAGACAGTTCCACGCTTATGGTGTATTTGATTCGTGTATCATTTCGTACTCTTGGTGCTTATGATAAAGAGTTAGCAGAAATTAAGCGGGAAGGGGGCGGACTTTCCTATGGTAGTCCCGCTACGGCTATGACCGTTCGTCCCGTCTCATCTTTCTTTGGCTATGGGTCGTCTGAGGTGAAATGGATTAATTTAATGTGCGCGAGGACACGAAGCGATTTCGTTGGCTCAGAAATTTACAAAAACCGCCGCTTCTTCTCCGGCGGCCATTTTGATGGAGTGGTAAAATCTCAATCAATGGGCATCAAGCGAGAGAGTAAAAGGTCGGCTTCTGCAACTTCGCCGTGTGCTGATCTTAGGGCTGTATATCACAATTGTTTCAATCGTTGGTACTCGGAGAAGTTTGTGAAAGGTCAATTCGATGAAGAACCCTGCGTCTCCGAATGGCAGAAGTACAGAGCTTGCCTCTCTGAGCATTTGGAAGATAAGAAGCTGAAGCGCTTCTTGGAAGAGGAAACGATTGTTCATTCCTCCATGAAAGCTGAAACGAGTTGA MNGKGNFWQCKSLLLLLLLLQCDRIGERKKLGDSSTLMVYLIRVSFRTLGAYDKELAEIKREGGGLSYGSPATAMTVRPVSSFFGYGSSEVKWINLMCARTRSDFVGSEIYKNRRFFSGGHFDGVVKSQSMGIKRESKRSASATSPCADLRAVYHNCFNRWYSEKFVKGQFDEEPCVSEWQKYRACLSEHLEDKKLKRFLEEETIVHSSMKAETS Homology
BLAST of CmoCh12G005920 vs. ExPASy Swiss-Prot
Match: Q9SMZ9 (Uncharacterized protein At4g33100 OS=Arabidopsis thaliana OX=3702 GN=At4g33100 PE=3 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 5.7e-22 Identity = 48/82 (58.54%), Postives = 64/82 (78.05%), Query Frame = 0
BLAST of CmoCh12G005920 vs. ExPASy Swiss-Prot
Match: O60200 (Mitochondrial distribution and morphology protein 35 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MDM35 PE=1 SV=3) HSP 1 Score: 61.6 bits (148), Expect = 1.2e-08 Identity = 27/63 (42.86%), Postives = 37/63 (58.73%), Query Frame = 0
BLAST of CmoCh12G005920 vs. ExPASy Swiss-Prot
Match: A9ULB4 (TP53-regulated inhibitor of apoptosis 1 OS=Xenopus tropicalis OX=8364 GN=triap1 PE=2 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 6.1e-08 Identity = 21/55 (38.18%), Postives = 36/55 (65.45%), Query Frame = 0
BLAST of CmoCh12G005920 vs. ExPASy Swiss-Prot
Match: Q6DD38 (TP53-regulated inhibitor of apoptosis 1-B OS=Xenopus laevis OX=8355 GN=triap1-b PE=3 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 1.0e-07 Identity = 21/55 (38.18%), Postives = 35/55 (63.64%), Query Frame = 0
BLAST of CmoCh12G005920 vs. ExPASy Swiss-Prot
Match: Q6INR6 (TP53-regulated inhibitor of apoptosis 1-A OS=Xenopus laevis OX=8355 GN=triap1-a PE=3 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 1.8e-07 Identity = 21/55 (38.18%), Postives = 35/55 (63.64%), Query Frame = 0
BLAST of CmoCh12G005920 vs. ExPASy TrEMBL
Match: A0A6J1GGR4 (uncharacterized protein At4g33100 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111454054 PE=3 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 3.4e-41 Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0
BLAST of CmoCh12G005920 vs. ExPASy TrEMBL
Match: A0A6J1GHR8 (uncharacterized protein At4g33100 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454054 PE=3 SV=1) HSP 1 Score: 176.8 bits (447), Expect = 9.8e-41 Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0
BLAST of CmoCh12G005920 vs. ExPASy TrEMBL
Match: A0A6J1KJX4 (uncharacterized protein At4g33100 isoform X4 OS=Cucurbita maxima OX=3661 GN=LOC111495937 PE=3 SV=1) HSP 1 Score: 176.0 bits (445), Expect = 1.7e-40 Identity = 84/85 (98.82%), Postives = 84/85 (98.82%), Query Frame = 0
BLAST of CmoCh12G005920 vs. ExPASy TrEMBL
Match: A0A6J1KME9 (uncharacterized protein At4g33100 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111495937 PE=3 SV=1) HSP 1 Score: 174.5 bits (441), Expect = 4.8e-40 Identity = 83/84 (98.81%), Postives = 83/84 (98.81%), Query Frame = 0
BLAST of CmoCh12G005920 vs. ExPASy TrEMBL
Match: A0A6J1KNW5 (uncharacterized protein At4g33100 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111495937 PE=3 SV=1) HSP 1 Score: 174.5 bits (441), Expect = 4.8e-40 Identity = 83/84 (98.81%), Postives = 83/84 (98.81%), Query Frame = 0
BLAST of CmoCh12G005920 vs. TAIR 10
Match: AT4G33100.1 (CONTAINS InterPro DOMAIN/s: Mitochondrial distribution/morphology family 35/apoptosis (InterPro:IPR007918); Has 214 Blast hits to 214 proteins in 102 species: Archae - 0; Bacteria - 0; Metazoa - 110; Fungi - 69; Plants - 29; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). ) HSP 1 Score: 105.9 bits (263), Expect = 4.1e-23 Identity = 48/82 (58.54%), Postives = 64/82 (78.05%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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